F393465

General Info

Members Datasets Scaffolds Average Seq Length
296 193 592 385

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606375|2808916880
Length 429
Sequence HEPPHAAERSAAGANEGAPVSEGVPGKVPALVEQFKGGLAAPICLTWEWTYACNLSCAHCLSSSGRRDPLELSTDEITSVIDELQRMQVFYVNVGGGEPTVRPDFWDLLDYAIDHQVGVKFSTNGVRLSPERARRLATTDYVDVQISLDGATRAVNDAVRGPGSYDMAVRAMENLADAGFRDFKISVVMTRHNVAQLDDFAVLADRYGAQLRITRLRPSGRGADVWDDLHPTAEQQRRLYDWLVGHGGNVLTGDSFFHLNALGSEPIPGLNLCGAGRVVCLIDPVGDVYACPFAIHDAFKAGNVRSPGGFERVWRESDLFADLRRPSSGGACSGCSAFDACQGGCMAAKFFTGLPLDGPDPECVKGHGATALSAVDPAALPGQGKDHSRRTVALGMPAVRARRSDRFCDESPLAGADLGGPVPDERGTS

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
57 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
58 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
59 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
60 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
61 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
62 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
67 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
77 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
78 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
79 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
170 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
171 2506783011 Frankia datiscae Dg1 Isolate Nodule
172 2508501039 Frankia saprophytica CN3 Isolate Nodule
173 2517572101 Frankia sp. DC12 Isolate Nodule
174 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
175 2547132424 Nocardia nova SH22a Isolate Unclassified
176 2582580736 Prauserella sp. Am3 Isolate Unclassified
177 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
178 2687453737 Frankia sp. BMG5.36 Isolate Nodule
179 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
180 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
181 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
182 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
183 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
184 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
185 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
186 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
187 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
188 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
189 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
190 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
191 8002775197 Frankia nepalensis CN7 Isolate Nodule
192 8002784119 Frankia sp. AgB1.9 Isolate Nodule
193 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.55
Metatranscriptomes 0.34
Isolates 8.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.73
Nodule 2.7
Rhizoplane 4.39
Rhizosphere 77.36
Stem 0
Stem Tuber 0.34
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10007152 3300005327 Bacteria 9014
2 Ga0070680_100000530 3300005336 Bacteria 26042
3 Ga0070660_100001260 3300005339 Bacteria 17237
4 Ga0070714_100018701 3300005435 Bacteria 5635
5 Ga0070714_100036810 3300005435 Bacteria 4107
6 Ga0070713_100098013 3300005436 Bacteria 2534
7 Ga0070708_100009972 3300005445 Bacteria 7682
8 Ga0070708_100024832 3300005445 Bacteria 5118
9 Ga0070663_100000281 3300005455 Bacteria 25793
10 Ga0070681_10000101 3300005458 Bacteria 63429
11 Ga0070706_100014475 3300005467 Bacteria 7286
12 Ga0070706_100027544 3300005467 Bacteria 5230
13 Ga0070706_100028569 3300005467 Bacteria 5135
14 Ga0070706_100079922 3300005467 Bacteria 3027
15 Ga0070707_100000160 3300005468 Bacteria 64063
16 Ga0070707_100003321 3300005468 Bacteria 15191
17 Ga0070698_100002048 3300005471 Bacteria 22405
18 Ga0070698_100002327 3300005471 Bacteria 21025
19 Ga0070698_100016531 3300005471 Bacteria 7784
20 Ga0070698_100026419 3300005471 Bacteria 6043
21 Ga0070699_100000527 3300005518 Bacteria 36131
22 Ga0070699_100000638 3300005518 Bacteria 32809
23 Ga0070679_100030253 3300005530 Bacteria 5345
24 Ga0070684_100085652 3300005535 Bacteria 2795
25 Ga0070697_100000412 3300005536 Bacteria 32979
26 Ga0068859_100000103 3300005617 Bacteria 79192
27 Ga0068859_100106905 3300005617 Bacteria 2857
28 Ga0068863_100018216 3300005841 Bacteria 6724
29 Ga0068858_100024424 3300005842 Bacteria 5631
30 Ga0068862_100000232 3300005844 Bacteria 62130
31 Ga0081455_10000093 3300005937 Bacteria 97067
32 Ga0081455_10002091 3300005937 Bacteria 23830
33 Ga0081455_10029108 3300005937 Bacteria 5038
34 Ga0070717_10025071 3300006028 Bacteria 4737
35 Ga0070717_10058000 3300006028 Bacteria 3201
36 Ga0070717_10062072 3300006028 Bacteria 3099
37 Ga0075365_10011983 3300006038 Bacteria 5124
38 Ga0075365_10135026 3300006038 Bacteria 1709
39 Ga0075363_100067078 3300006048 Bacteria 1944
40 Ga0075364_10013801 3300006051 Bacteria 4977
41 Ga0075362_10020169 3300006177 Bacteria 2782
42 Ga0075367_10037843 3300006178 Bacteria 2805
43 Ga0097620_100000103 3300006931 Bacteria 79192
44 Ga0097620_100106905 3300006931 Bacteria 2857
45 Ga0111539_10366546 3300009094 Bacteria 1677
46 Ga0105243_10351733 3300009148 Bacteria 1353
47 Ga0105248_10000038 3300009177 Bacteria 179916
48 Ga0105249_10047017 3300009553 Bacteria 3930
49 Ga0157369_10387993 3300013105 Bacteria 1449
50 Ga0163163_10005622 3300014325 Bacteria 10864
51 Ga0206353_11024863 3300020082 Bacteria 4276
52 Ga0213875_10000186 3300021388 Bacteria 63592
53 Ga0213875_10062329 3300021388 Bacteria 1744
54 Ga0207705_10120236 3300025909 Bacteria 1948
55 Ga0207684_10035380 3300025910 Bacteria 4241
56 Ga0207684_10041694 3300025910 Bacteria 3891
57 Ga0207707_10001741 3300025912 Bacteria 20017
58 Ga0207693_10025348 3300025915 Bacteria 4702
59 Ga0207660_10002519 3300025917 Bacteria 12044
60 Ga0207652_10008936 3300025921 Bacteria 8073
61 Ga0207646_10003942 3300025922 Bacteria 16461
62 Ga0207711_10000726 3300025941 Bacteria 32435
63 Ga0207712_10038476 3300025961 Bacteria 3271
64 Ga0207703_10022945 3300026035 Bacteria 4900
65 Ga0207678_10000116 3300026067 Bacteria 65805
66 Ga0207702_10502737 3300026078 Bacteria 1182
67 Ga0207641_10000587 3300026088 Bacteria 39995
68 Ga0268265_10000161 3300028380 Bacteria 81761
69 Ga0307517_10084432 3300028786 Bacteria 2673
70 Ga0265338_10014420 3300028800 Bacteria 8798
71 Ga0265327_10000303 3300031251 Bacteria 95597
72 Ga0307513_10153995 3300031456 Bacteria 2202
73 Ga0307513_10174751 3300031456 Bacteria 2020
74 Ga0316576_10054906 3300031727 Bacteria 2906
75 Ga0316576_10057229 3300031727 Bacteria 2849
76 Ga0316576_10158901 3300031727 Bacteria 1704
77 Ga0316578_10064796 3300031728 Bacteria 2157
78 Ga0307516_10029589 3300031730 Bacteria 5536
79 Ga0316577_10027131 3300031733 Bacteria 3193
80 Ga0316585_10040952 3300032137 Bacteria 1476
81 Ga0373923_0011406 3300035111 Bacteria 3258
82 Ga0373945_0061679 3300035116 Bacteria 1401
83 Ga0373953_0045108 3300035117 Bacteria 1765
84 Ga0373954_0010277 3300035118 Bacteria 4128
85 Ga0373956_0012286 3300035119 Bacteria 3548
86 Ga0373946_0025271 3300035171 Bacteria 2335
87 Ga0373955_0018212 3300035172 Bacteria 3489
88 Ga0373955_0101265 3300035172 Bacteria 1654
89 Ga0316574_0013382 3300035398 Bacteria 4715
90 Ga0316574_0042713 3300035398 Bacteria 2799
91 Ga0316574_0171657 3300035398 Bacteria 1396
92 Ga0373924_0003734 3300035410 Bacteria 5261
93 Ga0373935_0004258 3300035692 Bacteria 8390
94 Ga0373935_0214465 3300035692 Bacteria 1335
95 Ga0373933_0001703 3300035724 Bacteria 12762
96 Ga0373933_0032067 3300035724 Bacteria 3052
97 Ga0373937_0004029 3300036401 Bacteria 12446
98 Ga0373937_0017082 3300036401 Bacteria 6453
99 Ga0373937_0092281 3300036401 Bacteria 2806
100 Ga0316582_0059825 3300036647 Bacteria 2441
101 Ga0373925_0006697 3300037068 Bacteria 8451
102 Ga0373925_0291235 3300037068 Bacteria 1317
103 Ga0395900_0012922 3300037418 Bacteria 8529
104 Ga0395898_0066479 3300037466 Bacteria 3492
105 Ga0436364_0175250 3300037853 Bacteria 2042
106 Ga0436364_1040466 3300037853 Bacteria 95595
107 Ga0400485_19080 3300038735 Bacteria 7580
108 Ga0400483_043202 3300039062 Bacteria 21399
109 Ga0400483_106531 3300039062 Bacteria 2463
110 Ga0400483_189668 3300039062 Bacteria 7741
111 Ga0400483_241024 3300039062 Bacteria 1438
112 Ga0400483_241025 3300039062 Bacteria 1434
113 Ga0400483_280027 3300039062 Bacteria 4748
114 Ga0400483_281395 3300039062 Bacteria 4847
115 Ga0451802_2046360 3300041460 Bacteria 2007
116 Ga0451837_0663632 3300041494 Bacteria 1589
117 Ga0466972_0004307 3300044658 Bacteria 7112
118 Ga0466965_0012949 3300044683 Bacteria 3929
119 Ga0466961_0061531 3300044693 Bacteria 2386
120 Ga0466963_0032484 3300044694 Bacteria 3380
121 Ga0466960_0002296 3300044901 Bacteria 7167
122 Ga0466959_0150424 3300045049 Bacteria 1641
123 Ga0466967_0017515 3300045976 Bacteria 5691
124 Ga0466967_0055819 3300045976 Bacteria 3480
125 Ga0495592_0001955 3300046454 Bacteria 14544
126 Ga0495603_0002947 3300046455 Bacteria 10071
127 Ga0495629_0004178 3300046459 Bacteria 10839
128 Ga0495629_0049828 3300046459 Bacteria 2935
129 Ga0495651_0000410 3300046462 Bacteria 33253
130 Ga0495651_0002829 3300046462 Bacteria 13443
131 Ga0495651_0018951 3300046462 Bacteria 5331
132 Ga0495651_0054871 3300046462 Bacteria 3062
133 Ga0495653_0000327 3300046463 Bacteria 38827
134 Ga0495653_0036380 3300046463 Bacteria 3878
135 Ga0495653_0036412 3300046463 Bacteria 3876
136 Ga0495653_0103578 3300046463 Bacteria 2058
137 Ga0495582_0020296 3300046473 Bacteria 3636
138 Ga0495662_0004487 3300046476 Bacteria 7004
139 Ga0495662_0064487 3300046476 Bacteria 1770
140 Ga0495664_0004406 3300046477 Bacteria 7704
141 Ga0495607_0017565 3300046501 Bacteria 4588
142 Ga0495608_0000533 3300046511 Bacteria 26129
143 Ga0495608_0078578 3300046511 Bacteria 2146
144 Ga0495618_0018693 3300046514 Bacteria 4257
145 Ga0495618_0059664 3300046514 Bacteria 2418
146 Ga0495618_0086357 3300046514 Bacteria 2006
147 Ga0495628_0002148 3300046516 Bacteria 17853
148 Ga0495628_0007836 3300046516 Bacteria 9209
149 Ga0495628_0041932 3300046516 Bacteria 3652
150 Ga0495628_0083249 3300046516 Bacteria 2484
151 Ga0495648_0089958 3300046524 Bacteria 1721
152 Ga0495652_0000737 3300046529 Bacteria 37853
153 Ga0495652_0025989 3300046529 Bacteria 5173
154 Ga0495652_0182219 3300046529 Bacteria 1610
155 Ga0495652_0204062 3300046529 Bacteria 1498
156 Ga0495640_0021695 3300046533 Bacteria 4706
157 Ga0495640_0034797 3300046533 Bacteria 3567
158 Ga0495640_0105798 3300046533 Bacteria 1843
159 Ga0495586_0024535 3300046535 Bacteria 3224
160 Ga0495587_0000503 3300046536 Bacteria 27272
161 Ga0495587_0006155 3300046536 Bacteria 7831
162 Ga0495587_0018693 3300046536 Bacteria 4297
163 Ga0495645_0020158 3300046543 Bacteria 4807
164 Ga0495645_0038563 3300046543 Bacteria 3484
165 Ga0495645_0187871 3300046543 Bacteria 1410
166 Ga0495667_0001009 3300046559 Bacteria 18277
167 Ga0495667_0020494 3300046559 Bacteria 4461
168 Ga0495667_0023704 3300046559 Bacteria 4133
169 Ga0495634_0010750 3300046642 Bacteria 6694
170 Ga0495634_0017908 3300046642 Bacteria 5048
171 Ga0495625_0000213 3300046660 Bacteria 91768
172 Ga0495635_0000748 3300046663 Bacteria 21035
173 Ga0495635_0004783 3300046663 Bacteria 9409
174 Ga0495657_0001301 3300046675 Bacteria 21729
175 Ga0495657_0013468 3300046675 Bacteria 6033
176 Ga0495599_0001885 3300046678 Bacteria 12151
177 Ga0495623_0010717 3300046679 Bacteria 5936
178 Ga0495623_0040156 3300046679 Bacteria 2988
179 Ga0495623_0062340 3300046679 Bacteria 2337
180 Ga0495646_0019804 3300046680 Bacteria 4256
181 Ga0495647_0035402 3300046681 Bacteria 1875
182 Ga0495658_0004645 3300046683 Bacteria 6756
183 Ga0495658_0201774 3300046683 Bacteria 1240
184 Ga0495624_0013363 3300046690 Bacteria 5599
185 Ga0495600_0000490 3300046809 Bacteria 20460
186 Ga0495600_0008063 3300046809 Bacteria 6458
187 Ga0495600_0015268 3300046809 Bacteria 4853
188 Ga0495604_0000720 3300047317 Bacteria 28031
189 Ga0495604_0047073 3300047317 Bacteria 3360
190 Ga0495604_0123739 3300047317 Bacteria 1868
191 Ga0495674_0002114 3300047319 Bacteria 19507
192 Ga0495674_0004139 3300047319 Bacteria 14006
193 Ga0495674_0073934 3300047319 Bacteria 2936
194 Ga0495676_0000590 3300047321 Bacteria 29946
195 Ga0495680_0001260 3300047322 Bacteria 27628
196 Ga0495680_0005834 3300047322 Bacteria 11522
197 Ga0495680_0009548 3300047322 Bacteria 8717
198 Ga0495680_0226276 3300047322 Bacteria 1333
199 Ga0495683_0000359 3300047323 Bacteria 37596
200 Ga0495675_0002143 3300047444 Bacteria 11761
201 Ga0495675_0047759 3300047444 Bacteria 2723
202 Ga0495684_0001039 3300047471 Bacteria 22437
203 Ga0495684_0042846 3300047471 Bacteria 3466
204 Ga0495684_0075997 3300047471 Bacteria 2551
205 Ga0495593_0016130 3300047673 Bacteria 4216
206 Ga0495602_0001027 3300048088 Bacteria 27185
207 Ga0495602_0027158 3300048088 Bacteria 5509
208 Ga0496104_0002732 3300048907 Bacteria 15183
209 Ga0496104_0057868 3300048907 Bacteria 3669
210 Ga0496105_0003931 3300048908 Bacteria 11111
211 Ga0496105_0115868 3300048908 Bacteria 2210
212 Ga0496108_0186059 3300048911 Bacteria 1799
213 Ga0496109_0113267 3300048912 Bacteria 2523
214 Ga0496109_0159403 3300048912 Bacteria 2114
215 Ga0496109_0414717 3300048912 Bacteria 1272
216 Ga0496112_0298662 3300048915 Bacteria 1556
217 Ga0496114_0104672 3300048917 Bacteria 2420
218 Ga0496114_0119006 3300048917 Bacteria 2270
219 Ga0496115_0153280 3300048918 Bacteria 1903
220 Ga0496116_0000491 3300048919 Bacteria 54460
221 Ga0496117_0033806 3300048920 Bacteria 3862
222 Ga0496118_0039680 3300048921 Bacteria 3754
223 Ga0496118_0085861 3300048921 Bacteria 2189
224 Ga0496118_0102773 3300048921 Bacteria 1925
225 Ga0496119_0054843 3300048922 Bacteria 2425
226 Ga0496121_0003802 3300048924 Bacteria 21043
227 Ga0496121_0015223 3300048924 Bacteria 8083
228 Ga0496121_0020571 3300048924 Bacteria 6519
229 Ga0501031_0001533 3300049568 Bacteria 14365
230 Ga0501034_0019092 3300049571 Bacteria 7019
231 Ga0501036_0095010 3300049572 Bacteria 2520
232 Ga0501036_0192484 3300049572 Bacteria 1716
233 Ga0501037_0035995 3300049573 Bacteria 3649
234 Ga0501038_0138814 3300049574 Bacteria 1990
235 Ga0501039_0234827 3300049575 Bacteria 1442
236 Ga0501040_0143471 3300049576 Bacteria 1683
237 Ga0501041_0050694 3300049577 Bacteria 2530
238 Ga0501046_0261234 3300049580 Bacteria 1272
239 Ga0501068_0000703 3300049584 Bacteria 17141
240 Ga0501069_0000079 3300049585 Bacteria 47599
241 Ga0501070_0000092 3300049586 Bacteria 76642
242 Ga0501071_0007702 3300049587 Bacteria 7097
243 Ga0501071_0049113 3300049587 Bacteria 3037
244 Ga0501071_0135342 3300049587 Bacteria 1833
245 Ga0501072_0014478 3300049588 Bacteria 6044
246 Ga0501073_0000071 3300049589 Bacteria 62958
247 Ga0501074_0000010 3300049590 Bacteria 99952
248 Ga0501079_0112128 3300049741 Bacteria 2120
249 Ga0501079_0181406 3300049741 Bacteria 1643
250 Ga0501080_0000419 3300049742 Bacteria 32644
251 Ga0501080_0129854 3300049742 Bacteria 2332
252 Ga0501083_0001988 3300049744 Bacteria 14065
253 Ga0501083_0013343 3300049744 Bacteria 5745
254 Ga0501044_0346236 3300049823 Bacteria 1406
255 nmdc:mga03n38_10947_c1 3300050490 Bacteria 3362
256 nmdc:mga00v17_108249_c1 3300050491 Bacteria 1761
257 nmdc:mga00v17_42989_c1 3300050491 Bacteria 2720
258 nmdc:mga0yw44_1649_c1 3300050492 Bacteria 8994
259 nmdc:mga0yw44_8070_c1 3300050492 Bacteria 5224
260 nmdc:mga06z11_28191_c1 3300050494 Bacteria 2692
261 nmdc:mga0n895_448171_c1 3300050512 Bacteria 1303
262 Ga0495601_0035620 3300053077 Bacteria 3107
263 Ga0495601_0040179 3300053077 Bacteria 2930
264 Ga0495612_0005403 3300053078 Bacteria 5280
265 Ga0495612_0055985 3300053078 Bacteria 1627
266 Ga0495595_0006189 3300053084 Bacteria 4869
267 Ga0495595_0022899 3300053084 Bacteria 2746
268 Ga0495619_0003533 3300053085 Bacteria 10085
269 Ga0500604_0019569 3300053151 Bacteria 1897
270 Ga0500616_0032074 3300053153 Bacteria 2873
271 Ga0530510_0062540 3300061734 Bacteria 2695
272 Ga0530510_0233926 3300061734 Bacteria 1367
273 2808916880 2808606375 Bacteria 9466072
274 2506867213 2506783011 Bacteria 5323186
275 2508677443 2508501039 Bacteria 9978592
276 2517760463 2517572101 Bacteria 6884336
277 2523386627 2523231044 Bacteria 6434991
278 2548696632 2547132424 Bacteria 8348532
279 2583150274 2582580736 Bacteria 5325865
280 2676200111 2675902999 Bacteria 9438463
281 2689960318 2687453737 Bacteria 11203906
282 2774844689 2773857921 Bacteria 9435764
283 2776371472 2775506925 Bacteria 7237746
284 2795785946 2795385470 Bacteria 8317180
285 2863072364 2863067949 Bacteria 8541735
286 2866556685 2866552031 Bacteria 5824618
287 2899365709 2899359706 Bacteria 10940472
288 2899372226 2899370129 Bacteria 6781179
289 2919717282 2919713450 Bacteria 7431245
290 2932400385 2932398195 Bacteria 3847976
291 2954691624 2954691527 Bacteria 10720516
292 2954706719 2954701450 Bacteria 10834262
293 8001785565 8001781756 Bacteria 9586736
294 8002775943 8002775197 Bacteria 10728764
295 8002787621 8002784119 Bacteria 9788632
296 8056213478 8056207758 Bacteria 8639239
297 Ga0070658_10007152
298 Ga0070680_100000530
299 Ga0070660_100001260
300 Ga0070714_100018701
301 Ga0070714_100036810
302 Ga0070713_100098013
303 Ga0070708_100009972
304 Ga0070708_100024832
305 Ga0070663_100000281
306 Ga0070681_10000101
307 Ga0070706_100014475
308 Ga0070706_100027544
309 Ga0070706_100028569
310 Ga0070706_100079922
311 Ga0070707_100000160
312 Ga0070707_100003321
313 Ga0070698_100002048
314 Ga0070698_100002327
315 Ga0070698_100016531
316 Ga0070698_100026419
317 Ga0070699_100000527
318 Ga0070699_100000638
319 Ga0070679_100030253
320 Ga0070684_100085652
321 Ga0070697_100000412
322 Ga0068859_100000103
323 Ga0068859_100106905
324 Ga0068863_100018216
325 Ga0068858_100024424
326 Ga0068862_100000232
327 Ga0081455_10000093
328 Ga0081455_10002091
329 Ga0081455_10029108
330 Ga0070717_10025071
331 Ga0070717_10058000
332 Ga0070717_10062072
333 Ga0075365_10011983
334 Ga0075365_10135026
335 Ga0075363_100067078
336 Ga0075364_10013801
337 Ga0075362_10020169
338 Ga0075367_10037843
339 Ga0097620_100000103
340 Ga0097620_100106905
341 Ga0111539_10366546
342 Ga0105243_10351733
343 Ga0105248_10000038
344 Ga0105249_10047017
345 Ga0157369_10387993
346 Ga0163163_10005622
347 Ga0206353_11024863
348 Ga0213875_10000186
349 Ga0213875_10062329
350 Ga0207705_10120236
351 Ga0207684_10035380
352 Ga0207684_10041694
353 Ga0207707_10001741
354 Ga0207693_10025348
355 Ga0207660_10002519
356 Ga0207652_10008936
357 Ga0207646_10003942
358 Ga0207711_10000726
359 Ga0207712_10038476
360 Ga0207703_10022945
361 Ga0207678_10000116
362 Ga0207702_10502737
363 Ga0207641_10000587
364 Ga0268265_10000161
365 Ga0307517_10084432
366 Ga0265338_10014420
367 Ga0265327_10000303
368 Ga0307513_10153995
369 Ga0307513_10174751
370 Ga0316576_10054906
371 Ga0316576_10057229
372 Ga0316576_10158901
373 Ga0316578_10064796
374 Ga0307516_10029589
375 Ga0316577_10027131
376 Ga0316585_10040952
377 Ga0373923_0011406
378 Ga0373945_0061679
379 Ga0373953_0045108
380 Ga0373954_0010277
381 Ga0373956_0012286
382 Ga0373946_0025271
383 Ga0373955_0018212
384 Ga0373955_0101265
385 Ga0316574_0013382
386 Ga0316574_0042713
387 Ga0316574_0171657
388 Ga0373924_0003734
389 Ga0373935_0004258
390 Ga0373935_0214465
391 Ga0373933_0001703
392 Ga0373933_0032067
393 Ga0373937_0004029
394 Ga0373937_0017082
395 Ga0373937_0092281
396 Ga0316582_0059825
397 Ga0373925_0006697
398 Ga0373925_0291235
399 Ga0395900_0012922
400 Ga0395898_0066479
401 Ga0436364_0175250
402 Ga0436364_1040466
403 Ga0400485_19080
404 Ga0400483_043202
405 Ga0400483_106531
406 Ga0400483_189668
407 Ga0400483_241024
408 Ga0400483_241025
409 Ga0400483_280027
410 Ga0400483_281395
411 Ga0451802_2046360
412 Ga0451837_0663632
413 Ga0466972_0004307
414 Ga0466965_0012949
415 Ga0466961_0061531
416 Ga0466963_0032484
417 Ga0466960_0002296
418 Ga0466959_0150424
419 Ga0466967_0017515
420 Ga0466967_0055819
421 Ga0495592_0001955
422 Ga0495603_0002947
423 Ga0495629_0004178
424 Ga0495629_0049828
425 Ga0495651_0000410
426 Ga0495651_0002829
427 Ga0495651_0018951
428 Ga0495651_0054871
429 Ga0495653_0000327
430 Ga0495653_0036380
431 Ga0495653_0036412
432 Ga0495653_0103578
433 Ga0495582_0020296
434 Ga0495662_0004487
435 Ga0495662_0064487
436 Ga0495664_0004406
437 Ga0495607_0017565
438 Ga0495608_0000533
439 Ga0495608_0078578
440 Ga0495618_0018693
441 Ga0495618_0059664
442 Ga0495618_0086357
443 Ga0495628_0002148
444 Ga0495628_0007836
445 Ga0495628_0041932
446 Ga0495628_0083249
447 Ga0495648_0089958
448 Ga0495652_0000737
449 Ga0495652_0025989
450 Ga0495652_0182219
451 Ga0495652_0204062
452 Ga0495640_0021695
453 Ga0495640_0034797
454 Ga0495640_0105798
455 Ga0495586_0024535
456 Ga0495587_0000503
457 Ga0495587_0006155
458 Ga0495587_0018693
459 Ga0495645_0020158
460 Ga0495645_0038563
461 Ga0495645_0187871
462 Ga0495667_0001009
463 Ga0495667_0020494
464 Ga0495667_0023704
465 Ga0495634_0010750
466 Ga0495634_0017908
467 Ga0495625_0000213
468 Ga0495635_0000748
469 Ga0495635_0004783
470 Ga0495657_0001301
471 Ga0495657_0013468
472 Ga0495599_0001885
473 Ga0495623_0010717
474 Ga0495623_0040156
475 Ga0495623_0062340
476 Ga0495646_0019804
477 Ga0495647_0035402
478 Ga0495658_0004645
479 Ga0495658_0201774
480 Ga0495624_0013363
481 Ga0495600_0000490
482 Ga0495600_0008063
483 Ga0495600_0015268
484 Ga0495604_0000720
485 Ga0495604_0047073
486 Ga0495604_0123739
487 Ga0495674_0002114
488 Ga0495674_0004139
489 Ga0495674_0073934
490 Ga0495676_0000590
491 Ga0495680_0001260
492 Ga0495680_0005834
493 Ga0495680_0009548
494 Ga0495680_0226276
495 Ga0495683_0000359
496 Ga0495675_0002143
497 Ga0495675_0047759
498 Ga0495684_0001039
499 Ga0495684_0042846
500 Ga0495684_0075997
501 Ga0495593_0016130
502 Ga0495602_0001027
503 Ga0495602_0027158
504 Ga0496104_0002732
505 Ga0496104_0057868
506 Ga0496105_0003931
507 Ga0496105_0115868
508 Ga0496108_0186059
509 Ga0496109_0113267
510 Ga0496109_0159403
511 Ga0496109_0414717
512 Ga0496112_0298662
513 Ga0496114_0104672
514 Ga0496114_0119006
515 Ga0496115_0153280
516 Ga0496116_0000491
517 Ga0496117_0033806
518 Ga0496118_0039680
519 Ga0496118_0085861
520 Ga0496118_0102773
521 Ga0496119_0054843
522 Ga0496121_0003802
523 Ga0496121_0015223
524 Ga0496121_0020571
525 Ga0501031_0001533
526 Ga0501034_0019092
527 Ga0501036_0095010
528 Ga0501036_0192484
529 Ga0501037_0035995
530 Ga0501038_0138814
531 Ga0501039_0234827
532 Ga0501040_0143471
533 Ga0501041_0050694
534 Ga0501046_0261234
535 Ga0501068_0000703
536 Ga0501069_0000079
537 Ga0501070_0000092
538 Ga0501071_0007702
539 Ga0501071_0049113
540 Ga0501071_0135342
541 Ga0501072_0014478
542 Ga0501073_0000071
543 Ga0501074_0000010
544 Ga0501079_0112128
545 Ga0501079_0181406
546 Ga0501080_0000419
547 Ga0501080_0129854
548 Ga0501083_0001988
549 Ga0501083_0013343
550 Ga0501044_0346236
551 nmdc:mga03n38_10947_c1
552 nmdc:mga00v17_108249_c1
553 nmdc:mga00v17_42989_c1
554 nmdc:mga0yw44_1649_c1
555 nmdc:mga0yw44_8070_c1
556 nmdc:mga06z11_28191_c1
557 nmdc:mga0n895_448171_c1
558 Ga0495601_0035620
559 Ga0495601_0040179
560 Ga0495612_0005403
561 Ga0495612_0055985
562 Ga0495595_0006189
563 Ga0495595_0022899
564 Ga0495619_0003533
565 Ga0500604_0019569
566 Ga0500616_0032074
567 Ga0530510_0062540
568 Ga0530510_0233926
569 2808916880
570 2506867213
571 2508677443
572 2517760463
573 2523386627
574 2548696632
575 2583150274
576 2676200111
577 2689960318
578 2774844689
579 2776371472
580 2795785946
581 2863072364
582 2866556685
583 2899365709
584 2899372226
585 2919717282
586 2932400385
587 2954691624
588 2954706719
589 8001785565
590 8002775943
591 8002787621
592 8056213478

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

47

204

0.92

PF13186

SPASM

Iron-sulfur cluster-binding domain

273

336

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6efn-assembly1.cif.gz_A-2 structure of a ripp maturase, skfb 0.8074 21 307
7tol-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound 0.8051 17 229
7tom-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound 0.8038 17 229
6b4c-assembly3.cif.gz_C structure of viperin from trichoderma virens 0.7853 21 267
5v1s-assembly1.cif.gz_A crystal structure of streptococcus suis suib bound to s-adenosylmethionine 0.7824 11 325
ID Description Score Start End Superfamily
af_P9WJ79_7_303_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9804 10 303 3.20.20.70
af_P9WJ79_7_303_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9675 10 303 3.20.20.70
af_O33183_77_264_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8707 23 201 3.20.20.70
af_O69696_93_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8361 28 201 3.20.20.70
af_O33183_77_264_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8281 23 201 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A6L6BRY4-F1-model_v4 Mycofactocin radical SAM maturase 0.9695 16 208 GO:0003824
GO:0046872
GO:0051536
AF-A0A1I4W3G4-F1-model_v4 Mycofactocin radical SAM maturase 0.9672 3 374 GO:0003824
GO:0046872
GO:0051539
AF-A0A6I2VYQ0-F1-model_v4 Mycofactocin radical SAM maturase 0.9574 52 375 GO:0003824
GO:0046872
GO:0051539
AF-A0A831V6A9-F1-model_v4 Radical SAM protein 0.9552 16 235 GO:0003824
GO:0046872
GO:0051536
AF-A0A6L6BRY4-F1-model_v4 Mycofactocin radical SAM maturase 0.9549 16 208 GO:0003824
GO:0046872
GO:0051536

Map