F393284

General Info

Members Datasets Scaffolds Average Seq Length
296 219 592 301

Family's Representative Sequence

Representative Sequence 3300035119|Ga0373956_0001731|Ga0373956_0001731_871_1902
Length 338
Sequence MAVRQSVTTTATHNRPPAEPAPGDPPAGPGARRRDRPDRSNPLVRIRSLLPGLARAEQRVAQVVLGDPAAVAHHSITEVAESAGTSETTVTRFCKAVGLGGYPELRLALAAETARTAARSEPDLGSTIDSSDPLDQVVRKVAYADARAIEETARQLDTTELAAVARLMAAAGRIEIYGVGPSSLIAQDFQHKLVAFAHTDPLAALGSAALLGPGDVAIGISHTGSTMDTIELLREARRHGATTVALTNFPRSPITEVADHVLTTATRETTFRSGPMASRIAQLTVIDCLFIGIAQQHDEASRAALELTRTALAGRRMDPRPESRRRGRREHPPAPPGR

Samples

Sample ID Description Type Environment
1 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
96 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
97 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
98 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
99 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
109 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
114 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
130 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
182 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
186 2558860280 Kutzneria sp. 744 Isolate Unclassified
187 2582580736 Prauserella sp. Am3 Isolate Unclassified
188 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
189 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
190 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
191 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
192 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
193 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
194 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
195 2808606448 Streptomyces sp. 193411 Isolate Unclassified
196 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
197 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
198 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
199 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
200 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
201 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
202 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
203 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
204 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
205 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
206 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
207 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
208 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
209 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
210 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
211 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
212 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
213 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
214 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
215 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
216 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
217 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
218 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
219 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.5
Metatranscriptomes 0.68
Isolates 11.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.01
Nodule 0
Rhizoplane 1.35
Rhizosphere 85.14
Stem 0
Stem Tuber 0.34
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373956_0001731 3300035119 Bacteria 8998
2 JGI24740J21852_10034455 3300001979 Bacteria 1595
3 JGI24739J22299_10011503 3300001989 Bacteria 3266
4 JGI24737J22298_10003578 3300001990 Bacteria 5478
5 JGI24735J21928_10025757 3300002067 Bacteria 1773
6 JGI25406J46586_10001539 3300003203 Bacteria 10890
7 JGI25405J52794_10007561 3300003911 Bacteria 2006
8 Ga0070658_10139861 3300005327 Bacteria 2022
9 Ga0070683_100021188 3300005329 Bacteria 5796
10 Ga0070683_100146705 3300005329 Bacteria 2236
11 Ga0070682_100105213 3300005337 Bacteria 1870
12 Ga0070660_100011750 3300005339 Bacteria 6234
13 Ga0070668_100000514 3300005347 Bacteria 25634
14 Ga0070688_100367246 3300005365 Bacteria 1058
15 Ga0070659_100019275 3300005366 Bacteria 5166
16 Ga0070667_100118632 3300005367 Bacteria 2300
17 Ga0070714_100022026 3300005435 Bacteria 5222
18 Ga0070713_100333266 3300005436 Bacteria 1404
19 Ga0070713_100465815 3300005436 Unclassified 1189
20 Ga0070710_10000618 3300005437 Bacteria 16933
21 Ga0070710_10091157 3300005437 Bacteria 1798
22 Ga0070700_100024143 3300005441 Bacteria 3566
23 Ga0070663_100027428 3300005455 Bacteria 3868
24 Ga0070678_100199940 3300005456 Bacteria 1649
25 Ga0070681_10250271 3300005458 Bacteria 1685
26 Ga0070679_100383152 3300005530 Bacteria 1353
27 Ga0070684_100232913 3300005535 Bacteria 1682
28 Ga0070684_100489358 3300005535 Bacteria 1139
29 Ga0068853_100041449 3300005539 Bacteria 3933
30 Ga0068853_100187551 3300005539 Bacteria 1878
31 Ga0070672_100180292 3300005543 Bacteria 1760
32 Ga0070665_100024395 3300005548 Bacteria 6090
33 Ga0070665_100027858 3300005548 Bacteria 5690
34 Ga0070665_100216725 3300005548 Bacteria 1915
35 Ga0070665_100323201 3300005548 Bacteria 1547
36 Ga0068857_100137194 3300005577 Bacteria 2209
37 Ga0068856_100218157 3300005614 Bacteria 1923
38 Ga0068852_100043530 3300005616 Bacteria 3809
39 Ga0068852_100124006 3300005616 Bacteria 2369
40 Ga0068866_10070458 3300005718 Bacteria 1846
41 Ga0068861_100032739 3300005719 Bacteria 3830
42 Ga0068858_100047296 3300005842 Bacteria 3988
43 Ga0068858_100594830 3300005842 Bacteria 1073
44 Ga0068860_100040387 3300005843 Bacteria 4459
45 Ga0081455_10000117 3300005937 Bacteria 91308
46 Ga0081455_10000143 3300005937 Bacteria 84594
47 Ga0081455_10030715 3300005937 Bacteria 4876
48 Ga0081455_10046904 3300005937 Bacteria 3745
49 Ga0081455_10310264 3300005937 Unclassified 1128
50 Ga0081539_10000027 3300005985 Bacteria 328691
51 Ga0075428_100000104 3300006844 Bacteria 71062
52 Ga0075428_100000918 3300006844 Bacteria 31110
53 Ga0075428_100043392 3300006844 Bacteria 4943
54 Ga0075428_100243547 3300006844 Bacteria 1940
55 Ga0075430_100003324 3300006846 Bacteria 13479
56 Ga0075431_100010302 3300006847 Bacteria 9392
57 Ga0075431_100015308 3300006847 Bacteria 7771
58 Ga0075431_100340454 3300006847 Bacteria 1509
59 Ga0075431_100457511 3300006847 Bacteria 1271
60 Ga0075429_100007834 3300006880 Bacteria 9278
61 Ga0105251_10062679 3300009011 Bacteria 1745
62 Ga0111539_10087525 3300009094 Bacteria 3659
63 Ga0105245_10027169 3300009098 Bacteria 5042
64 Ga0105245_10322674 3300009098 Bacteria 1522
65 Ga0114129_10000234 3300009147 Bacteria 61922
66 Ga0105237_10240897 3300009545 Bacteria 1810
67 Ga0105238_10022246 3300009551 Bacteria 6463
68 Ga0105249_10045909 3300009553 Bacteria 3976
69 Ga0105032_103931 3300009979 Bacteria 1277
70 Ga0105239_10281661 3300010375 Bacteria 1872
71 Ga0157370_10044644 3300013104 Bacteria 4257
72 Ga0157369_10121467 3300013105 Bacteria 2771
73 Ga0157369_10134642 3300013105 Bacteria 2616
74 Ga0157374_10279668 3300013296 Bacteria 1647
75 Ga0157378_10434162 3300013297 Bacteria 1300
76 Ga0157375_10090883 3300013308 Bacteria 3113
77 Ga0157375_10099251 3300013308 Bacteria 2990
78 Ga0163163_10514374 3300014325 Bacteria 1259
79 Ga0157380_10115346 3300014326 Bacteria 2265
80 Ga0157377_10045658 3300014745 Bacteria 2448
81 Ga0157379_10080110 3300014968 Bacteria 2925
82 Ga0163161_10350636 3300017792 Bacteria 1173
83 Ga0206356_11130138 3300020070 Bacteria 1069
84 Ga0206354_10171417 3300020081 Bacteria 1171
85 Ga0213875_10000577 3300021388 Bacteria 29908
86 Ga0213875_10001925 3300021388 Bacteria 12860
87 Ga0209758_1007880 3300025297 Bacteria 7079
88 Ga0207656_10026836 3300025321 Bacteria 2352
89 Ga0207688_10001986 3300025901 Bacteria 10967
90 Ga0207647_10043975 3300025904 Bacteria 2793
91 Ga0207705_10107198 3300025909 Bacteria 2061
92 Ga0207707_10002377 3300025912 Bacteria 16958
93 Ga0207707_10393575 3300025912 Bacteria 1190
94 Ga0207662_10006468 3300025918 Bacteria 6326
95 Ga0207662_10096666 3300025918 Bacteria 1825
96 Ga0207657_10032156 3300025919 Bacteria 4744
97 Ga0207657_10040552 3300025919 Bacteria 4124
98 Ga0207652_10005402 3300025921 Bacteria 10368
99 Ga0207652_10433946 3300025921 Bacteria 1184
100 Ga0207694_10092340 3300025924 Bacteria 2389
101 Ga0207687_10009200 3300025927 Bacteria 6464
102 Ga0207700_10011067 3300025928 Bacteria 5735
103 Ga0207664_10003295 3300025929 Bacteria 10734
104 Ga0207704_10038311 3300025938 Bacteria 2779
105 Ga0207691_10109055 3300025940 Bacteria 2463
106 Ga0207689_10005977 3300025942 Bacteria 10767
107 Ga0207661_10015630 3300025944 Bacteria 5591
108 Ga0207661_10243652 3300025944 Bacteria 1596
109 Ga0207667_10371791 3300025949 Bacteria 1457
110 Ga0207712_10019957 3300025961 Bacteria 4384
111 Ga0207668_10007099 3300025972 Bacteria 6646
112 Ga0207703_10043361 3300026035 Bacteria 3611
113 Ga0207639_10136783 3300026041 Bacteria 2036
114 Ga0207678_10000054 3300026067 Bacteria 87616
115 Ga0207678_10006358 3300026067 Bacteria 10488
116 Ga0207678_10223017 3300026067 Bacteria 1614
117 Ga0207678_10229779 3300026067 Bacteria 1588
118 Ga0207708_10027285 3300026075 Bacteria 4322
119 Ga0207702_10405769 3300026078 Bacteria 1315
120 Ga0207641_10150315 3300026088 Bacteria 2109
121 Ga0207674_10026099 3300026116 Bacteria 6215
122 Ga0207674_10031700 3300026116 Bacteria 5549
123 Ga0207674_10151561 3300026116 Bacteria 2275
124 Ga0207674_10490201 3300026116 Bacteria 1188
125 Ga0207675_100002704 3300026118 Bacteria 17472
126 Ga0207675_100041208 3300026118 Bacteria 4312
127 Ga0207683_10052761 3300026121 Bacteria 3564
128 Ga0207698_10011908 3300026142 Bacteria 5664
129 Ga0207698_10438351 3300026142 Bacteria 1258
130 Ga0268266_10026567 3300028379 Bacteria 4927
131 Ga0268266_10238298 3300028379 Bacteria 1678
132 Ga0268266_10264575 3300028379 Bacteria 1594
133 Ga0307515_10015767 3300028794 Bacteria 13903
134 Ga0307515_10063849 3300028794 Bacteria 5161
135 Ga0307511_10000303 3300030521 Bacteria 52216
136 Ga0307512_10011633 3300030522 Bacteria 8327
137 Ga0316177_1190126 3300030731 Bacteria 5193
138 Ga0316176_1009226 3300030732 Bacteria 1494
139 Ga0314311_1016216 3300030733 Bacteria 5763
140 Ga0307513_10043982 3300031456 Bacteria 4897
141 Ga0307509_10059597 3300031507 Bacteria 4039
142 Ga0307509_10147787 3300031507 Bacteria 2272
143 Ga0307408_100271266 3300031548 Bacteria 1409
144 Ga0307413_10048117 3300031824 Bacteria 2547
145 Ga0307413_10110216 3300031824 Bacteria 1841
146 Ga0307518_10000115 3300031838 Bacteria 56725
147 Ga0307518_10042182 3300031838 Bacteria 3321
148 Ga0307411_10072387 3300032005 Bacteria 2340
149 Ga0307507_10046543 3300033179 Bacteria 4249
150 Ga0307507_10086750 3300033179 Bacteria 2711
151 Ga0307510_10065342 3300033180 Bacteria 3685
152 Ga0373940_0060011 3300035088 Bacteria 1086
153 Ga0373924_0111619 3300035410 Bacteria 1182
154 Ga0373925_0000228 3300037068 Bacteria 59957
155 Ga0395898_0001976 3300037466 Bacteria 25792
156 Ga0436364_0693135 3300037853 Bacteria 33773
157 Ga0439442_016664 3300042002 Bacteria 1516
158 Ga0439449_0032409 3300042007 Bacteria 1948
159 Ga0451577_0163951 3300042876 Bacteria 2002
160 Ga0466969_0011969 3300044656 Bacteria 4587
161 Ga0466972_0015566 3300044658 Bacteria 3802
162 Ga0466965_0001567 3300044683 Bacteria 9311
163 Ga0466965_0004120 3300044683 Bacteria 6460
164 Ga0466965_0004476 3300044683 Bacteria 6220
165 Ga0466965_0153469 3300044683 Bacteria 1204
166 Ga0466966_0002416 3300044684 Bacteria 12203
167 Ga0466966_0041567 3300044684 Bacteria 2954
168 Ga0466961_0003669 3300044693 Bacteria 9570
169 Ga0466961_0189597 3300044693 Bacteria 1275
170 Ga0466963_0076467 3300044694 Bacteria 2261
171 Ga0466971_0116453 3300044719 Bacteria 1235
172 Ga0466970_0004765 3300044765 Bacteria 6700
173 Ga0466970_0006689 3300044765 Bacteria 5767
174 Ga0466970_0054563 3300044765 Bacteria 2134
175 Ga0466960_0021595 3300044901 Bacteria 2868
176 Ga0466960_0092157 3300044901 Bacteria 1546
177 Ga0466959_0004620 3300045049 Bacteria 9253
178 Ga0466959_0191854 3300045049 Bacteria 1426
179 Ga0466967_0000774 3300045976 Bacteria 16608
180 Ga0466967_0026484 3300045976 Bacteria 4804
181 Ga0466967_0041791 3300045976 Bacteria 3957
182 Ga0466967_0134165 3300045976 Bacteria 2301
183 Ga0466967_0317158 3300045976 Bacteria 1503
184 Ga0495627_061867 3300046453 Bacteria 1106
185 Ga0495592_0002045 3300046454 Bacteria 14203
186 Ga0495629_0051270 3300046459 Bacteria 2888
187 Ga0495629_0276417 3300046459 Bacteria 1153
188 Ga0495650_0055213 3300046471 Bacteria 1617
189 Ga0495585_0038676 3300046492 Bacteria 2684
190 Ga0495606_0001111 3300046507 Bacteria 38436
191 Ga0495608_0028626 3300046511 Bacteria 3786
192 Ga0495618_0208355 3300046514 Bacteria 1236
193 Ga0495628_0201289 3300046516 Bacteria 1500
194 Ga0495640_0005583 3300046533 Bacteria 10004
195 Ga0495667_0033358 3300046559 Bacteria 3446
196 Ga0495667_0068812 3300046559 Bacteria 2311
197 Ga0495634_0178377 3300046642 Bacteria 1331
198 Ga0495611_0021035 3300046648 Bacteria 2815
199 Ga0495625_0191018 3300046660 Bacteria 1357
200 Ga0495657_0055799 3300046675 Bacteria 2634
201 Ga0495613_0012236 3300046689 Bacteria 6377
202 Ga0495624_0189559 3300046690 Bacteria 1251
203 Ga0495604_0136307 3300047317 Bacteria 1758
204 Ga0495676_0005143 3300047321 Bacteria 11984
205 Ga0495680_0041780 3300047322 Bacteria 3643
206 Ga0495684_0089265 3300047471 Bacteria 2335
207 Ga0496102_0436635 3300048905 Bacteria 1229
208 Ga0496109_0401536 3300048912 Bacteria 1295
209 Ga0496110_0048940 3300048913 Bacteria 3707
210 Ga0496114_0126102 3300048917 Bacteria 2207
211 Ga0496126_0019532 3300048929 Bacteria 6670
212 Ga0501031_0032097 3300049568 Bacteria 3425
213 Ga0501031_0236086 3300049568 Bacteria 1189
214 Ga0501032_0241057 3300049569 Bacteria 1175
215 Ga0501033_0031309 3300049570 Bacteria 3998
216 Ga0501033_0058633 3300049570 Bacteria 2843
217 Ga0501033_0114038 3300049570 Bacteria 1965
218 Ga0501034_0001865 3300049571 Bacteria 26741
219 Ga0501036_0002622 3300049572 Bacteria 14177
220 Ga0501036_0126503 3300049572 Bacteria 2158
221 Ga0501037_0046617 3300049573 Bacteria 3179
222 Ga0501038_0223550 3300049574 Bacteria 1501
223 Ga0501039_0014335 3300049575 Bacteria 6069
224 Ga0501040_0051808 3300049576 Bacteria 2808
225 Ga0501043_0014236 3300049579 Bacteria 6224
226 Ga0501046_0075762 3300049580 Bacteria 2608
227 Ga0501047_0000368 3300049581 Bacteria 51076
228 Ga0501047_0017482 3300049581 Bacteria 6869
229 Ga0501047_0032917 3300049581 Bacteria 5005
230 Ga0501047_0123623 3300049581 Bacteria 2468
231 Ga0501047_0244978 3300049581 Bacteria 1642
232 Ga0501048_0063522 3300049582 Bacteria 2611
233 Ga0501068_0064639 3300049584 Bacteria 2227
234 Ga0501068_0274885 3300049584 Bacteria 1076
235 Ga0501070_0005856 3300049586 Bacteria 10483
236 Ga0501072_0059504 3300049588 Bacteria 3012
237 Ga0501073_0097260 3300049589 Bacteria 2045
238 Ga0501074_0000420 3300049590 Bacteria 25342
239 Ga0501035_0001610 3300049822 Bacteria 22852
240 Ga0501035_0021618 3300049822 Bacteria 5916
241 Ga0501035_0036487 3300049822 Bacteria 4455
242 Ga0501044_0000324 3300049823 Bacteria 60304
243 Ga0501044_0013837 3300049823 Bacteria 8720
244 Ga0501044_0059313 3300049823 Bacteria 3921
245 Ga0501044_0179301 3300049823 Bacteria 2086
246 Ga0501044_0281186 3300049823 Bacteria 1598
247 Ga0501045_0096474 3300049824 Bacteria 2188
248 nmdc:mga05p37_4106_c1 3300050507 Bacteria 17020
249 nmdc:mga09592_7256_c1 3300050508 Bacteria 9007
250 nmdc:mga0qj67_30151_c1 3300050509 Bacteria 4219
251 nmdc:mga06r32_403_c4 3300050510 Bacteria 29300
252 nmdc:mga06r32_5549_c1 3300050510 Bacteria 11370
253 nmdc:mga06r32_84607_c1 3300050510 Bacteria 3092
254 nmdc:mga08y16_116673_c1 3300050511 Bacteria 2779
255 Ga0495655_0016339 3300053083 Bacteria 1596
256 Ga0495619_0012016 3300053085 Bacteria 5455
257 Ga0500644_0004173 3300053088 Bacteria 3602
258 Ga0500559_0001910 3300053136 Bacteria 11286
259 Ga0466962_0073669 3300061719 Bacteria 1632
260 Ga0466962_0147225 3300061719 Bacteria 1142
261 Ga0530510_0088970 3300061734 Bacteria 2251
262 2515855612 2515154155 Bacteria 7985436
263 2559427651 2558860280 Bacteria 11429938
264 2583151935 2582580736 Bacteria 5325865
265 2586065185 2585427649 Bacteria 9053857
266 2676473413 2675903058 Bacteria 6822861
267 2753075179 2751185734 Bacteria 8863695
268 2776377447 2775506925 Bacteria 7237746
269 2784585677 2784132148 Bacteria 8627943
270 2791913779 2791354901 Bacteria 8322202
271 2795793870 2795385472 Bacteria 6627535
272 2809229175 2808606448 Bacteria 8656184
273 2809593579 2808606522 Bacteria 9488490
274 2816421104 2816332119 Bacteria 8120218
275 2816508016 2816332139 Bacteria 9138787
276 2827631923 2827628540 Bacteria 6858585
277 2831937632 2831935698 Bacteria 5963223
278 2861527458 2861520306 Bacteria 8348283
279 2863069518 2863067949 Bacteria 8541735
280 2866557364 2866552031 Bacteria 5824618
281 2866612457 2866612099 Bacteria 7543886
282 2870728510 2870721527 Bacteria 9689237
283 2887485434 2887478801 Bacteria 8972725
284 2891328400 2891326441 Bacteria 6439512
285 2891400353 2891395885 Bacteria 9251614
286 2899362301 2899359706 Bacteria 10940472
287 2899374499 2899370129 Bacteria 6781179
288 2912727602 2912723979 Bacteria 8557534
289 2915769018 2915768154 Bacteria 8424322
290 2917739161 2917736166 Bacteria 9690793
291 3006327191 3006321560 Bacteria 8247479
292 8003315308 8003314358 Bacteria 10575343
293 8023629012 8023623736 Bacteria 8593882
294 8047719732 8047710418 Bacteria 11023148
295 8056214940 8056207758 Bacteria 8639239
296 8057569385 8057568493 Bacteria 7221719
297 Ga0373956_0001731
298 JGI24740J21852_10034455
299 JGI24739J22299_10011503
300 JGI24737J22298_10003578
301 JGI24735J21928_10025757
302 JGI25406J46586_10001539
303 JGI25405J52794_10007561
304 Ga0070658_10139861
305 Ga0070683_100021188
306 Ga0070683_100146705
307 Ga0070682_100105213
308 Ga0070660_100011750
309 Ga0070668_100000514
310 Ga0070688_100367246
311 Ga0070659_100019275
312 Ga0070667_100118632
313 Ga0070714_100022026
314 Ga0070713_100333266
315 Ga0070713_100465815
316 Ga0070710_10000618
317 Ga0070710_10091157
318 Ga0070700_100024143
319 Ga0070663_100027428
320 Ga0070678_100199940
321 Ga0070681_10250271
322 Ga0070679_100383152
323 Ga0070684_100232913
324 Ga0070684_100489358
325 Ga0068853_100041449
326 Ga0068853_100187551
327 Ga0070672_100180292
328 Ga0070665_100024395
329 Ga0070665_100027858
330 Ga0070665_100216725
331 Ga0070665_100323201
332 Ga0068857_100137194
333 Ga0068856_100218157
334 Ga0068852_100043530
335 Ga0068852_100124006
336 Ga0068866_10070458
337 Ga0068861_100032739
338 Ga0068858_100047296
339 Ga0068858_100594830
340 Ga0068860_100040387
341 Ga0081455_10000117
342 Ga0081455_10000143
343 Ga0081455_10030715
344 Ga0081455_10046904
345 Ga0081455_10310264
346 Ga0081539_10000027
347 Ga0075428_100000104
348 Ga0075428_100000918
349 Ga0075428_100043392
350 Ga0075428_100243547
351 Ga0075430_100003324
352 Ga0075431_100010302
353 Ga0075431_100015308
354 Ga0075431_100340454
355 Ga0075431_100457511
356 Ga0075429_100007834
357 Ga0105251_10062679
358 Ga0111539_10087525
359 Ga0105245_10027169
360 Ga0105245_10322674
361 Ga0114129_10000234
362 Ga0105237_10240897
363 Ga0105238_10022246
364 Ga0105249_10045909
365 Ga0105032_103931
366 Ga0105239_10281661
367 Ga0157370_10044644
368 Ga0157369_10121467
369 Ga0157369_10134642
370 Ga0157374_10279668
371 Ga0157378_10434162
372 Ga0157375_10090883
373 Ga0157375_10099251
374 Ga0163163_10514374
375 Ga0157380_10115346
376 Ga0157377_10045658
377 Ga0157379_10080110
378 Ga0163161_10350636
379 Ga0206356_11130138
380 Ga0206354_10171417
381 Ga0213875_10000577
382 Ga0213875_10001925
383 Ga0209758_1007880
384 Ga0207656_10026836
385 Ga0207688_10001986
386 Ga0207647_10043975
387 Ga0207705_10107198
388 Ga0207707_10002377
389 Ga0207707_10393575
390 Ga0207662_10006468
391 Ga0207662_10096666
392 Ga0207657_10032156
393 Ga0207657_10040552
394 Ga0207652_10005402
395 Ga0207652_10433946
396 Ga0207694_10092340
397 Ga0207687_10009200
398 Ga0207700_10011067
399 Ga0207664_10003295
400 Ga0207704_10038311
401 Ga0207691_10109055
402 Ga0207689_10005977
403 Ga0207661_10015630
404 Ga0207661_10243652
405 Ga0207667_10371791
406 Ga0207712_10019957
407 Ga0207668_10007099
408 Ga0207703_10043361
409 Ga0207639_10136783
410 Ga0207678_10000054
411 Ga0207678_10006358
412 Ga0207678_10223017
413 Ga0207678_10229779
414 Ga0207708_10027285
415 Ga0207702_10405769
416 Ga0207641_10150315
417 Ga0207674_10026099
418 Ga0207674_10031700
419 Ga0207674_10151561
420 Ga0207674_10490201
421 Ga0207675_100002704
422 Ga0207675_100041208
423 Ga0207683_10052761
424 Ga0207698_10011908
425 Ga0207698_10438351
426 Ga0268266_10026567
427 Ga0268266_10238298
428 Ga0268266_10264575
429 Ga0307515_10015767
430 Ga0307515_10063849
431 Ga0307511_10000303
432 Ga0307512_10011633
433 Ga0316177_1190126
434 Ga0316176_1009226
435 Ga0314311_1016216
436 Ga0307513_10043982
437 Ga0307509_10059597
438 Ga0307509_10147787
439 Ga0307408_100271266
440 Ga0307413_10048117
441 Ga0307413_10110216
442 Ga0307518_10000115
443 Ga0307518_10042182
444 Ga0307411_10072387
445 Ga0307507_10046543
446 Ga0307507_10086750
447 Ga0307510_10065342
448 Ga0373940_0060011
449 Ga0373924_0111619
450 Ga0373925_0000228
451 Ga0395898_0001976
452 Ga0436364_0693135
453 Ga0439442_016664
454 Ga0439449_0032409
455 Ga0451577_0163951
456 Ga0466969_0011969
457 Ga0466972_0015566
458 Ga0466965_0001567
459 Ga0466965_0004120
460 Ga0466965_0004476
461 Ga0466965_0153469
462 Ga0466966_0002416
463 Ga0466966_0041567
464 Ga0466961_0003669
465 Ga0466961_0189597
466 Ga0466963_0076467
467 Ga0466971_0116453
468 Ga0466970_0004765
469 Ga0466970_0006689
470 Ga0466970_0054563
471 Ga0466960_0021595
472 Ga0466960_0092157
473 Ga0466959_0004620
474 Ga0466959_0191854
475 Ga0466967_0000774
476 Ga0466967_0026484
477 Ga0466967_0041791
478 Ga0466967_0134165
479 Ga0466967_0317158
480 Ga0495627_061867
481 Ga0495592_0002045
482 Ga0495629_0051270
483 Ga0495629_0276417
484 Ga0495650_0055213
485 Ga0495585_0038676
486 Ga0495606_0001111
487 Ga0495608_0028626
488 Ga0495618_0208355
489 Ga0495628_0201289
490 Ga0495640_0005583
491 Ga0495667_0033358
492 Ga0495667_0068812
493 Ga0495634_0178377
494 Ga0495611_0021035
495 Ga0495625_0191018
496 Ga0495657_0055799
497 Ga0495613_0012236
498 Ga0495624_0189559
499 Ga0495604_0136307
500 Ga0495676_0005143
501 Ga0495680_0041780
502 Ga0495684_0089265
503 Ga0496102_0436635
504 Ga0496109_0401536
505 Ga0496110_0048940
506 Ga0496114_0126102
507 Ga0496126_0019532
508 Ga0501031_0032097
509 Ga0501031_0236086
510 Ga0501032_0241057
511 Ga0501033_0031309
512 Ga0501033_0058633
513 Ga0501033_0114038
514 Ga0501034_0001865
515 Ga0501036_0002622
516 Ga0501036_0126503
517 Ga0501037_0046617
518 Ga0501038_0223550
519 Ga0501039_0014335
520 Ga0501040_0051808
521 Ga0501043_0014236
522 Ga0501046_0075762
523 Ga0501047_0000368
524 Ga0501047_0017482
525 Ga0501047_0032917
526 Ga0501047_0123623
527 Ga0501047_0244978
528 Ga0501048_0063522
529 Ga0501068_0064639
530 Ga0501068_0274885
531 Ga0501070_0005856
532 Ga0501072_0059504
533 Ga0501073_0097260
534 Ga0501074_0000420
535 Ga0501035_0001610
536 Ga0501035_0021618
537 Ga0501035_0036487
538 Ga0501044_0000324
539 Ga0501044_0013837
540 Ga0501044_0059313
541 Ga0501044_0179301
542 Ga0501044_0281186
543 Ga0501045_0096474
544 nmdc:mga05p37_4106_c1
545 nmdc:mga09592_7256_c1
546 nmdc:mga0qj67_30151_c1
547 nmdc:mga06r32_403_c4
548 nmdc:mga06r32_5549_c1
549 nmdc:mga06r32_84607_c1
550 nmdc:mga08y16_116673_c1
551 Ga0495655_0016339
552 Ga0495619_0012016
553 Ga0500644_0004173
554 Ga0500559_0001910
555 Ga0466962_0073669
556 Ga0466962_0147225
557 Ga0530510_0088970
558 2515855612
559 2559427651
560 2583151935
561 2586065185
562 2676473413
563 2753075179
564 2776377447
565 2784585677
566 2791913779
567 2795793870
568 2809229175
569 2809593579
570 2816421104
571 2816508016
572 2827631923
573 2831937632
574 2861527458
575 2863069518
576 2866557364
577 2866612457
578 2870728510
579 2887485434
580 2891328400
581 2891400353
582 2899362301
583 2899374499
584 2912727602
585 2915769018
586 2917739161
587 3006327191
588 8003315308
589 8023629012
590 8047719732
591 8056214940
592 8057569385

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01418

HTH_6

Helix-turn-helix domain, rpiR family

40

116

0.96

PF01380

SIS

SIS domain

167

292

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7en7-assembly1.cif.gz_A the crystal structure of escherichia coli murr in complex with n-acetylmuramic-acid-6-phosphate 0.9577 101 290
7en6-assembly1.cif.gz_A the crystal structure of escherichia coli murr in apo form 0.9515 100 270
7en7-assembly1.cif.gz_A the crystal structure of escherichia coli murr in complex with n-acetylmuramic-acid-6-phosphate 0.948 101 290
7en5-assembly1.cif.gz_A the crystal structure of escherichia coli murr in complex with n-acetylglucosamine-6-phosphate 0.9473 101 290
7en5-assembly1.cif.gz_A the crystal structure of escherichia coli murr in complex with n-acetylglucosamine-6-phosphate 0.9377 101 290
ID Description Score Start End Superfamily
af_P0ACS7_105_289_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.974 105 287 3.40.50.10490
4ivnB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9591 13 86 1.10.10.10
af_P0ACS7_105_289_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9586 105 287 3.40.50.10490
af_P77245_100_282_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9584 106 286 3.40.50.10490
af_P37767_98_281_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9493 107 288 3.40.50.10490
ID Description Score Start End GO Terms
AF-A0A5P1X262-F1-model_v4 SIS domain-containing protein 0.9836 172 239 GO:0003677
GO:0003700
GO:0097367
GO:1901135
AF-A0A6N7IVJ9-F1-model_v4 SIS domain-containing protein 0.9648 119 268 GO:0003677
GO:0003700
GO:0097367
GO:1901135
AF-A0A6N6XE57-F1-model_v4 deleted 0.9642 97 234
AF-A0A1R4KK48-F1-model_v4 Sialic acid utilization regulator, RpiR family 0.9614 135 282 GO:0003677
GO:0003700
GO:0097367
GO:1901135
AF-A0A377LUQ4-F1-model_v4 DNA-binding transcriptional regulator 0.9473 137 288 GO:0003677
GO:0003700
GO:0097367
GO:1901135

Map