F393247

General Info

Members Datasets Scaffolds Average Seq Length
296 145 592 524

Family's Representative Sequence

Representative Sequence 3300026121|Ga0207683_10048063|Ga0207683_100480634
Length 571
Sequence MSYQVLARKWRPQRFDDVIGQQTVTRTLRNAIASGRIAHAFVFAGQRGSGKTTTARILARALNCVKGPTADPCGVCDACLEIAQGRDIDVLEIDAASHTGIDTIREVIIDNLAFAPVRNRYKVFIIDEVHQLSGSSFNALLKSIEEPPPHVVFMMATTELHKIPDTILSRSQVFEFRTIPTALITAQLKKIVTAEGLQAEDAALSLIARAAEGSMRDAQSALDQVIAFAGTTITVEDVATVLGLVGRDLLFDLVDAVVAEDAPAAFALADRAVASGHDLRLVVRELTRVVRDLMIVSVDPSRVGDGELAEGERERLTQLATRFSREDLMRAFDLLANAEQEIRTASHPRYQFEMLLLKWMHTRKLVPLTELLASGGGSKSQIPNPKSQTPSRSVANAPTPVKVAPSIQTTAKTAHSTNPEPRLPAEAGPAKAGIPNPDSSNLKDKFLAEIRSGKQMLYNTVVAQAQRIDVTGDRITFVFGPAHSSLRGLLDQQKPWLDATAERVAGRKIAVTSELSSAGSQAAPASSESRIPNPGEAPEKKRDLKAEAMSSSTVQAMLEVFPAEIRDVEEM

Samples

Sample ID Description Type Environment
1 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
109 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
113 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
114 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
115 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
141 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.03
Nodule 0
Rhizoplane 0
Rhizosphere 97.97
Stem 0
Stem Tuber 0
Unclassified 0.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207683_10048063 3300026121 Bacteria 3737
2 JGI24746J21847_1000483 3300001977 Bacteria 5953
3 JGI25406J46586_10010109 3300003203 Bacteria 4200
4 Ga0065704_10081053 3300005289 Bacteria 3829
5 Ga0065712_10068647 3300005290 Bacteria 9533
6 Ga0065715_10095620 3300005293 Bacteria 4043
7 Ga0065707_10001722 3300005295 Bacteria 8506
8 Ga0065707_10125792 3300005295 Bacteria 2016
9 Ga0070670_100005890 3300005331 Bacteria 10361
10 Ga0070670_100007462 3300005331 Bacteria 9285
11 Ga0070670_100031373 3300005331 Bacteria 4576
12 Ga0070677_10006252 3300005333 Bacteria 3952
13 Ga0068869_100059683 3300005334 Bacteria 2793
14 Ga0068868_100100986 3300005338 Bacteria 2334
15 Ga0070689_100036559 3300005340 Bacteria 3756
16 Ga0070689_100126793 3300005340 Bacteria 2043
17 Ga0070687_100003953 3300005343 Bacteria 5840
18 Ga0070687_100022360 3300005343 Bacteria 2988
19 Ga0070661_100027929 3300005344 Bacteria 4067
20 Ga0070692_10028201 3300005345 Bacteria 2789
21 Ga0070669_100017930 3300005353 Bacteria 5055
22 Ga0070669_100042006 3300005353 Bacteria 3326
23 Ga0070669_100051895 3300005353 Bacteria 2998
24 Ga0070675_100004388 3300005354 Bacteria 10761
25 Ga0070675_100027450 3300005354 Bacteria 4573
26 Ga0070675_100048015 3300005354 Bacteria 3499
27 Ga0070675_100141001 3300005354 Bacteria 2060
28 Ga0070671_100003405 3300005355 Bacteria 12404
29 Ga0070671_100031438 3300005355 Bacteria 4385
30 Ga0070671_100074342 3300005355 Bacteria 2839
31 Ga0070674_100006428 3300005356 Bacteria 6857
32 Ga0070673_100028861 3300005364 Bacteria 4131
33 Ga0070688_100017633 3300005365 Bacteria 4101
34 Ga0070688_100061917 3300005365 Bacteria 2367
35 Ga0070701_10058490 3300005438 Bacteria 2023
36 Ga0070705_100000108 3300005440 Bacteria 47179
37 Ga0070705_100010925 3300005440 Bacteria 4562
38 Ga0070705_100015397 3300005440 Bacteria 3954
39 Ga0070694_100001160 3300005444 Bacteria 15155
40 Ga0070694_100002811 3300005444 Bacteria 10330
41 Ga0070678_100141346 3300005456 Bacteria 1927
42 Ga0070662_100033724 3300005457 Bacteria 3606
43 Ga0068867_100027763 3300005459 Bacteria 4071
44 Ga0068867_100043229 3300005459 Bacteria 3298
45 Ga0068867_100055385 3300005459 Bacteria 2932
46 Ga0070698_100001914 3300005471 Bacteria 23193
47 Ga0070698_100008781 3300005471 Bacteria 10875
48 Ga0070699_100005726 3300005518 Bacteria 10873
49 Ga0070699_100005918 3300005518 Bacteria 10685
50 Ga0070699_100014913 3300005518 Bacteria 6681
51 Ga0070699_100021870 3300005518 Bacteria 5512
52 Ga0070697_100045129 3300005536 Bacteria 3571
53 Ga0070672_100112349 3300005543 Bacteria 2222
54 Ga0070686_100056123 3300005544 Bacteria 2525
55 Ga0070695_100000539 3300005545 Bacteria 20041
56 Ga0070696_100005487 3300005546 Bacteria 8462
57 Ga0070696_100006170 3300005546 Bacteria 8009
58 Ga0070696_100035111 3300005546 Bacteria 3450
59 Ga0070704_100057843 3300005549 Bacteria 2759
60 Ga0070704_100118074 3300005549 Bacteria 2031
61 Ga0070704_100126106 3300005549 Bacteria 1975
62 Ga0070664_100027677 3300005564 Bacteria 4712
63 Ga0070664_100095017 3300005564 Bacteria 2585
64 Ga0070664_100128636 3300005564 Bacteria 2223
65 Ga0068857_100039935 3300005577 Bacteria 4159
66 Ga0068859_100013724 3300005617 Bacteria 8123
67 Ga0068859_100027743 3300005617 Bacteria 5679
68 Ga0068859_100038639 3300005617 Bacteria 4788
69 Ga0068859_100190217 3300005617 Bacteria 2137
70 Ga0068864_100016044 3300005618 Bacteria 6232
71 Ga0068864_100026452 3300005618 Bacteria 4893
72 Ga0068861_100006122 3300005719 Bacteria 8188
73 Ga0068861_100048598 3300005719 Bacteria 3208
74 Ga0068870_10063607 3300005840 Bacteria 1990
75 Ga0068863_100073304 3300005841 Bacteria 3239
76 Ga0068858_100008898 3300005842 Bacteria 9626
77 Ga0068858_100110447 3300005842 Bacteria 2567
78 Ga0068860_100015692 3300005843 Bacteria 7396
79 Ga0068860_100030802 3300005843 Bacteria 5158
80 Ga0068862_100001873 3300005844 Bacteria 19052
81 Ga0081539_10000010 3300005985 Bacteria 484386
82 Ga0081539_10001702 3300005985 Bacteria 35478
83 Ga0081539_10063945 3300005985 Bacteria 2005
84 Ga0075364_10013308 3300006051 Bacteria 5051
85 Ga0097621_100066438 3300006237 Bacteria 2970
86 Ga0068871_100124885 3300006358 Bacteria 2177
87 Ga0068871_100141875 3300006358 Bacteria 2043
88 Ga0075428_100063659 3300006844 Bacteria 4038
89 Ga0075430_100003461 3300006846 Bacteria 13209
90 Ga0075430_100017805 3300006846 Bacteria 6048
91 Ga0075430_100043638 3300006846 Bacteria 3791
92 Ga0075430_100102980 3300006846 Bacteria 2383
93 Ga0075431_100006764 3300006847 Bacteria 11387
94 Ga0075431_100015224 3300006847 Bacteria 7793
95 Ga0075431_100095715 3300006847 Bacteria 3065
96 Ga0075431_100146169 3300006847 Bacteria 2436
97 Ga0075433_10022659 3300006852 Bacteria 5275
98 Ga0075433_10026046 3300006852 Bacteria 4947
99 Ga0075433_10028333 3300006852 Bacteria 4760
100 Ga0075433_10044419 3300006852 Bacteria 3860
101 Ga0075434_100002674 3300006871 Bacteria 15745
102 Ga0075434_100002784 3300006871 Bacteria 15480
103 Ga0075434_100027981 3300006871 Bacteria 5535
104 Ga0075434_100034359 3300006871 Bacteria 5006
105 Ga0075434_100079703 3300006871 Bacteria 3271
106 Ga0075429_100003784 3300006880 Bacteria 12906
107 Ga0075429_100019855 3300006880 Bacteria 5826
108 Ga0075429_100022230 3300006880 Bacteria 5501
109 Ga0075429_100053157 3300006880 Bacteria 3525
110 Ga0075429_100073740 3300006880 Bacteria 2972
111 Ga0097620_100013723 3300006931 Bacteria 8123
112 Ga0097620_100027741 3300006931 Bacteria 5679
113 Ga0097620_100038638 3300006931 Bacteria 4788
114 Ga0097620_100190229 3300006931 Bacteria 2137
115 Ga0075435_100009878 3300007076 Bacteria 6944
116 Ga0075435_100023783 3300007076 Bacteria 4746
117 Ga0111539_10000494 3300009094 Bacteria 50039
118 Ga0111539_10004818 3300009094 Bacteria 17588
119 Ga0111539_10020043 3300009094 Bacteria 8238
120 Ga0111539_10031711 3300009094 Bacteria 6420
121 Ga0111539_10046896 3300009094 Bacteria 5167
122 Ga0111539_10145127 3300009094 Bacteria 2779
123 Ga0114129_10013278 3300009147 Bacteria 11735
124 Ga0114129_10017413 3300009147 Bacteria 10234
125 Ga0114129_10081753 3300009147 Bacteria 4490
126 Ga0114129_10099632 3300009147 Bacteria 4022
127 Ga0114129_10103495 3300009147 Bacteria 3936
128 Ga0114129_10191223 3300009147 Bacteria 2779
129 Ga0105243_10164705 3300009148 Bacteria 1915
130 Ga0105248_10156331 3300009177 Bacteria 2573
131 Ga0105249_10019084 3300009553 Bacteria 6116
132 Ga0157375_10023616 3300013308 Bacteria 5676
133 Ga0157375_10025669 3300013308 Bacteria 5480
134 Ga0163163_10003986 3300014325 Bacteria 12603
135 Ga0163163_10051300 3300014325 Bacteria 4067
136 Ga0163163_10100463 3300014325 Bacteria 2915
137 Ga0157380_10019060 3300014326 Bacteria 5107
138 Ga0157380_10084469 3300014326 Bacteria 2603
139 Ga0157376_10013969 3300014969 Bacteria 6007
140 Ga0207697_10010043 3300025315 Bacteria 4066
141 Ga0207697_10044067 3300025315 Bacteria 1835
142 Ga0207682_10019011 3300025893 Bacteria 2689
143 Ga0207688_10001101 3300025901 Bacteria 13857
144 Ga0207645_10002903 3300025907 Bacteria 13245
145 Ga0207645_10017492 3300025907 Bacteria 4731
146 Ga0207643_10001472 3300025908 Bacteria 13519
147 Ga0207643_10006598 3300025908 Bacteria 6223
148 Ga0207643_10017388 3300025908 Bacteria 3932
149 Ga0207660_10050516 3300025917 Bacteria 2953
150 Ga0207662_10003341 3300025918 Bacteria 8233
151 Ga0207662_10043992 3300025918 Bacteria 2635
152 Ga0207662_10064048 3300025918 Bacteria 2211
153 Ga0207662_10066912 3300025918 Bacteria 2166
154 Ga0207646_10195895 3300025922 Bacteria 1824
155 Ga0207681_10002132 3300025923 Bacteria 12638
156 Ga0207681_10026347 3300025923 Bacteria 3749
157 Ga0207681_10030450 3300025923 Bacteria 3519
158 Ga0207650_10036297 3300025925 Bacteria 3586
159 Ga0207659_10010887 3300025926 Bacteria 5728
160 Ga0207659_10111541 3300025926 Unclassified 2080
161 Ga0207659_10116611 3300025926 Bacteria 2039
162 Ga0207644_10010745 3300025931 Bacteria 6038
163 Ga0207644_10112280 3300025931 Bacteria 2062
164 Ga0207706_10102828 3300025933 Bacteria 2513
165 Ga0207670_10021958 3300025936 Bacteria 3946
166 Ga0207670_10079155 3300025936 Bacteria 2294
167 Ga0207670_10096408 3300025936 Bacteria 2103
168 Ga0207669_10003333 3300025937 Bacteria 6950
169 Ga0207691_10033507 3300025940 Bacteria 4782
170 Ga0207691_10035857 3300025940 Bacteria 4599
171 Ga0207691_10047583 3300025940 Bacteria 3935
172 Ga0207691_10078032 3300025940 Bacteria 2982
173 Ga0207711_10150288 3300025941 Bacteria 2101
174 Ga0207689_10018202 3300025942 Bacteria 5930
175 Ga0207689_10052346 3300025942 Bacteria 3364
176 Ga0207689_10114258 3300025942 Bacteria 2219
177 Ga0207679_10014029 3300025945 Bacteria 5256
178 Ga0207651_10013914 3300025960 Bacteria 4626
179 Ga0207651_10100110 3300025960 Bacteria 2148
180 Ga0207712_10077221 3300025961 Bacteria 2413
181 Ga0207658_10093088 3300025986 Bacteria 2343
182 Ga0207703_10023320 3300026035 Bacteria 4860
183 Ga0207678_10046242 3300026067 Bacteria 3763
184 Ga0207708_10005896 3300026075 Bacteria 9064
185 Ga0207708_10013659 3300026075 Bacteria 6067
186 Ga0207708_10039617 3300026075 Bacteria 3591
187 Ga0207641_10056103 3300026088 Bacteria 3347
188 Ga0207641_10064119 3300026088 Bacteria 3140
189 Ga0207648_10005552 3300026089 Bacteria 12695
190 Ga0207648_10036147 3300026089 Bacteria 4351
191 Ga0207648_10146412 3300026089 Bacteria 2083
192 Ga0207676_10026672 3300026095 Bacteria 4297
193 Ga0207676_10044131 3300026095 Bacteria 3438
194 Ga0207676_10056212 3300026095 Bacteria 3093
195 Ga0207676_10056973 3300026095 Bacteria 3076
196 Ga0207674_10023602 3300026116 Bacteria 6585
197 Ga0207674_10028852 3300026116 Bacteria 5849
198 Ga0207674_10051158 3300026116 Bacteria 4216
199 Ga0207675_100012108 3300026118 Bacteria 8058
200 Ga0207675_100037430 3300026118 Bacteria 4525
201 Ga0207675_100155217 3300026118 Bacteria 2181
202 Ga0207683_10080243 3300026121 Bacteria 2894
203 Ga0207683_10167943 3300026121 Bacteria 1986
204 Ga0207683_10175117 3300026121 Bacteria 1944
205 Ga0207428_10000270 3300027907 Bacteria 69948
206 Ga0207428_10001093 3300027907 Bacteria 29501
207 Ga0207428_10055858 3300027907 Bacteria 3138
208 Ga0207428_10074618 3300027907 Bacteria 2660
209 Ga0268265_10000768 3300028380 Bacteria 31006
210 Ga0268265_10025007 3300028380 Bacteria 4232
211 Ga0268264_10012986 3300028381 Bacteria 6847
212 Ga0307408_100023632 3300031548 Bacteria 4190
213 Ga0307405_10006893 3300031731 Bacteria 5637
214 Ga0307410_10002658 3300031852 Bacteria 8714
215 Ga0307410_10024847 3300031852 Bacteria 3749
216 Ga0307407_10093284 3300031903 Bacteria 1851
217 Ga0307412_10002780 3300031911 Bacteria 9729
218 Ga0307409_100026062 3300031995 Bacteria 4116
219 Ga0307409_100067913 3300031995 Bacteria 2817
220 Ga0307416_100044891 3300032002 Bacteria 3474
221 Ga0307416_100143736 3300032002 Bacteria 2174
222 Ga0307416_100354859 3300032002 Bacteria 1486
223 Ga0307411_10006535 3300032005 Bacteria 5845
224 Ga0450908_005836 3300042184 Bacteria 2352
225 Ga0439440_0010017 3300042993 Bacteria 1972
226 Ga0451576_0031092 3300045051 Bacteria 5695
227 Ga0451576_0138067 3300045051 Bacteria 2542
228 Ga0495629_0002304 3300046459 Bacteria 14726
229 Ga0495643_0001941 3300046522 Bacteria 17402
230 Ga0495598_0009390 3300046537 Bacteria 2311
231 Ga0495659_0022482 3300046664 Bacteria 2134
232 Ga0495647_0003465 3300046681 Bacteria 5047
233 Ga0495669_0021709 3300046684 Bacteria 2789
234 Ga0501036_0021299 3300049572 Bacteria 5448
235 Ga0501041_0094844 3300049577 Bacteria 1843
236 Ga0501042_0024783 3300049578 Bacteria 4210
237 Ga0501043_0085104 3300049579 Bacteria 2485
238 Ga0501048_0034767 3300049582 Bacteria 3633
239 Ga0501048_0093639 3300049582 Bacteria 2119
240 Ga0501072_0009032 3300049588 Bacteria 7576
241 Ga0501072_0019879 3300049588 Bacteria 5197
242 Ga0501073_0052374 3300049589 Bacteria 2858
243 Ga0501076_0041694 3300049592 Bacteria 3612
244 Ga0501077_0004810 3300049593 Bacteria 8211
245 Ga0501081_0102002 3300049743 Bacteria 2029
246 Ga0501045_0046222 3300049824 Bacteria 3170
247 nmdc:mga0k408_30355_c1 3300050493 Bacteria 3082
248 nmdc:mga04h51_18528_c1 3300050495 Bacteria 2052
249 nmdc:mga05p37_113065_c1 3300050507 Bacteria 3338
250 nmdc:mga05p37_11849_c1 3300050507 Bacteria 10393
251 nmdc:mga05p37_159134_c1 3300050507 Bacteria 2759
252 nmdc:mga05p37_17046_c1 3300050507 Bacteria 8761
253 nmdc:mga05p37_51655_c1 3300050507 Bacteria 5054
254 nmdc:mga05p37_59208_c1 3300050507 Bacteria 4717
255 nmdc:mga05p37_62626_c1 3300050507 Bacteria 4578
256 nmdc:mga09592_3579_c1 3300050508 Bacteria 12544
257 nmdc:mga09592_47340_c1 3300050508 Bacteria 3624
258 nmdc:mga0qj67_119188_c1 3300050509 Bacteria 2134
259 nmdc:mga0qj67_24120_c1 3300050509 Bacteria 4687
260 nmdc:mga0qj67_2436_c1 3300050509 Bacteria 13251
261 nmdc:mga0qj67_28301_c1 3300050509 Bacteria 4350
262 nmdc:mga0qj67_67403_c1 3300050509 Bacteria 2852
263 nmdc:mga06r32_5514_c1 3300050510 Bacteria 11400
264 nmdc:mga06r32_64110_c1 3300050510 Bacteria 3542
265 nmdc:mga08y16_195_c1 3300050511 Bacteria 54659
266 nmdc:mga08y16_19906_c1 3300050511 Bacteria 7079
267 nmdc:mga08y16_208039_c1 3300050511 Bacteria 2026
268 nmdc:mga08y16_23568_c1 3300050511 Bacteria 6502
269 nmdc:mga08y16_2530_c1 3300050511 Bacteria 18798
270 nmdc:mga08y16_40506_c1 3300050511 Bacteria 4884
271 nmdc:mga08y16_4556_c1 3300050511 Bacteria 14449
272 nmdc:mga08y16_53015_c1 3300050511 Bacteria 4242
273 nmdc:mga0n895_281_c1 3300050512 Bacteria 33522
274 nmdc:mga0n895_35411_c1 3300050512 Bacteria 4813
275 nmdc:mga0n895_73517_c1 3300050512 Bacteria 3394
276 nmdc:mga0n895_77683_c1 3300050512 Bacteria 3303
277 nmdc:mga0n895_90084_c1 3300050512 Bacteria 3069
278 nmdc:mga0rr50_12769_c1 3300050513 Bacteria 5443
279 nmdc:mga0rr50_27027_c1 3300050513 Bacteria 4013
280 nmdc:mga0rr50_99442_c1 3300050513 Bacteria 2282
281 nmdc:mga0a205_22196_c1 3300050515 Bacteria 6008
282 nmdc:mga0a205_34105_c1 3300050515 Bacteria 4883
283 nmdc:mga0a205_36003_c1 3300050515 Bacteria 4755
284 nmdc:mga0a205_44476_c1 3300050515 Bacteria 4280
285 nmdc:mga0a205_469_c1 3300050515 Bacteria 31359
286 Ga0500568_0001181 3300053139 Bacteria 17461
287 Ga0500616_0001373 3300053153 Bacteria 23604
288 Ga0500645_000862 3300053730 Bacteria 17721
289 Ga0590071_000119 3300059421 Bacteria 21957
290 Ga0590071_000139 3300059421 Bacteria 20606
291 Ga0590074_000082 3300059423 Bacteria 10219
292 Ga0590075_000216 3300059424 Bacteria 16123
293 Ga0590075_001109 3300059424 Bacteria 6910
294 Ga0590077_000315 3300059426 Bacteria 13671
295 Ga0590077_000518 3300059426 Bacteria 10686
296 Ga0530510_0024499 3300061734 Bacteria 4306
297 Ga0207683_10048063
298 JGI24746J21847_1000483
299 JGI25406J46586_10010109
300 Ga0065704_10081053
301 Ga0065712_10068647
302 Ga0065715_10095620
303 Ga0065707_10001722
304 Ga0065707_10125792
305 Ga0070670_100005890
306 Ga0070670_100007462
307 Ga0070670_100031373
308 Ga0070677_10006252
309 Ga0068869_100059683
310 Ga0068868_100100986
311 Ga0070689_100036559
312 Ga0070689_100126793
313 Ga0070687_100003953
314 Ga0070687_100022360
315 Ga0070661_100027929
316 Ga0070692_10028201
317 Ga0070669_100017930
318 Ga0070669_100042006
319 Ga0070669_100051895
320 Ga0070675_100004388
321 Ga0070675_100027450
322 Ga0070675_100048015
323 Ga0070675_100141001
324 Ga0070671_100003405
325 Ga0070671_100031438
326 Ga0070671_100074342
327 Ga0070674_100006428
328 Ga0070673_100028861
329 Ga0070688_100017633
330 Ga0070688_100061917
331 Ga0070701_10058490
332 Ga0070705_100000108
333 Ga0070705_100010925
334 Ga0070705_100015397
335 Ga0070694_100001160
336 Ga0070694_100002811
337 Ga0070678_100141346
338 Ga0070662_100033724
339 Ga0068867_100027763
340 Ga0068867_100043229
341 Ga0068867_100055385
342 Ga0070698_100001914
343 Ga0070698_100008781
344 Ga0070699_100005726
345 Ga0070699_100005918
346 Ga0070699_100014913
347 Ga0070699_100021870
348 Ga0070697_100045129
349 Ga0070672_100112349
350 Ga0070686_100056123
351 Ga0070695_100000539
352 Ga0070696_100005487
353 Ga0070696_100006170
354 Ga0070696_100035111
355 Ga0070704_100057843
356 Ga0070704_100118074
357 Ga0070704_100126106
358 Ga0070664_100027677
359 Ga0070664_100095017
360 Ga0070664_100128636
361 Ga0068857_100039935
362 Ga0068859_100013724
363 Ga0068859_100027743
364 Ga0068859_100038639
365 Ga0068859_100190217
366 Ga0068864_100016044
367 Ga0068864_100026452
368 Ga0068861_100006122
369 Ga0068861_100048598
370 Ga0068870_10063607
371 Ga0068863_100073304
372 Ga0068858_100008898
373 Ga0068858_100110447
374 Ga0068860_100015692
375 Ga0068860_100030802
376 Ga0068862_100001873
377 Ga0081539_10000010
378 Ga0081539_10001702
379 Ga0081539_10063945
380 Ga0075364_10013308
381 Ga0097621_100066438
382 Ga0068871_100124885
383 Ga0068871_100141875
384 Ga0075428_100063659
385 Ga0075430_100003461
386 Ga0075430_100017805
387 Ga0075430_100043638
388 Ga0075430_100102980
389 Ga0075431_100006764
390 Ga0075431_100015224
391 Ga0075431_100095715
392 Ga0075431_100146169
393 Ga0075433_10022659
394 Ga0075433_10026046
395 Ga0075433_10028333
396 Ga0075433_10044419
397 Ga0075434_100002674
398 Ga0075434_100002784
399 Ga0075434_100027981
400 Ga0075434_100034359
401 Ga0075434_100079703
402 Ga0075429_100003784
403 Ga0075429_100019855
404 Ga0075429_100022230
405 Ga0075429_100053157
406 Ga0075429_100073740
407 Ga0097620_100013723
408 Ga0097620_100027741
409 Ga0097620_100038638
410 Ga0097620_100190229
411 Ga0075435_100009878
412 Ga0075435_100023783
413 Ga0111539_10000494
414 Ga0111539_10004818
415 Ga0111539_10020043
416 Ga0111539_10031711
417 Ga0111539_10046896
418 Ga0111539_10145127
419 Ga0114129_10013278
420 Ga0114129_10017413
421 Ga0114129_10081753
422 Ga0114129_10099632
423 Ga0114129_10103495
424 Ga0114129_10191223
425 Ga0105243_10164705
426 Ga0105248_10156331
427 Ga0105249_10019084
428 Ga0157375_10023616
429 Ga0157375_10025669
430 Ga0163163_10003986
431 Ga0163163_10051300
432 Ga0163163_10100463
433 Ga0157380_10019060
434 Ga0157380_10084469
435 Ga0157376_10013969
436 Ga0207697_10010043
437 Ga0207697_10044067
438 Ga0207682_10019011
439 Ga0207688_10001101
440 Ga0207645_10002903
441 Ga0207645_10017492
442 Ga0207643_10001472
443 Ga0207643_10006598
444 Ga0207643_10017388
445 Ga0207660_10050516
446 Ga0207662_10003341
447 Ga0207662_10043992
448 Ga0207662_10064048
449 Ga0207662_10066912
450 Ga0207646_10195895
451 Ga0207681_10002132
452 Ga0207681_10026347
453 Ga0207681_10030450
454 Ga0207650_10036297
455 Ga0207659_10010887
456 Ga0207659_10111541
457 Ga0207659_10116611
458 Ga0207644_10010745
459 Ga0207644_10112280
460 Ga0207706_10102828
461 Ga0207670_10021958
462 Ga0207670_10079155
463 Ga0207670_10096408
464 Ga0207669_10003333
465 Ga0207691_10033507
466 Ga0207691_10035857
467 Ga0207691_10047583
468 Ga0207691_10078032
469 Ga0207711_10150288
470 Ga0207689_10018202
471 Ga0207689_10052346
472 Ga0207689_10114258
473 Ga0207679_10014029
474 Ga0207651_10013914
475 Ga0207651_10100110
476 Ga0207712_10077221
477 Ga0207658_10093088
478 Ga0207703_10023320
479 Ga0207678_10046242
480 Ga0207708_10005896
481 Ga0207708_10013659
482 Ga0207708_10039617
483 Ga0207641_10056103
484 Ga0207641_10064119
485 Ga0207648_10005552
486 Ga0207648_10036147
487 Ga0207648_10146412
488 Ga0207676_10026672
489 Ga0207676_10044131
490 Ga0207676_10056212
491 Ga0207676_10056973
492 Ga0207674_10023602
493 Ga0207674_10028852
494 Ga0207674_10051158
495 Ga0207675_100012108
496 Ga0207675_100037430
497 Ga0207675_100155217
498 Ga0207683_10080243
499 Ga0207683_10167943
500 Ga0207683_10175117
501 Ga0207428_10000270
502 Ga0207428_10001093
503 Ga0207428_10055858
504 Ga0207428_10074618
505 Ga0268265_10000768
506 Ga0268265_10025007
507 Ga0268264_10012986
508 Ga0307408_100023632
509 Ga0307405_10006893
510 Ga0307410_10002658
511 Ga0307410_10024847
512 Ga0307407_10093284
513 Ga0307412_10002780
514 Ga0307409_100026062
515 Ga0307409_100067913
516 Ga0307416_100044891
517 Ga0307416_100143736
518 Ga0307416_100354859
519 Ga0307411_10006535
520 Ga0450908_005836
521 Ga0439440_0010017
522 Ga0451576_0031092
523 Ga0451576_0138067
524 Ga0495629_0002304
525 Ga0495643_0001941
526 Ga0495598_0009390
527 Ga0495659_0022482
528 Ga0495647_0003465
529 Ga0495669_0021709
530 Ga0501036_0021299
531 Ga0501041_0094844
532 Ga0501042_0024783
533 Ga0501043_0085104
534 Ga0501048_0034767
535 Ga0501048_0093639
536 Ga0501072_0009032
537 Ga0501072_0019879
538 Ga0501073_0052374
539 Ga0501076_0041694
540 Ga0501077_0004810
541 Ga0501081_0102002
542 Ga0501045_0046222
543 nmdc:mga0k408_30355_c1
544 nmdc:mga04h51_18528_c1
545 nmdc:mga05p37_113065_c1
546 nmdc:mga05p37_11849_c1
547 nmdc:mga05p37_159134_c1
548 nmdc:mga05p37_17046_c1
549 nmdc:mga05p37_51655_c1
550 nmdc:mga05p37_59208_c1
551 nmdc:mga05p37_62626_c1
552 nmdc:mga09592_3579_c1
553 nmdc:mga09592_47340_c1
554 nmdc:mga0qj67_119188_c1
555 nmdc:mga0qj67_24120_c1
556 nmdc:mga0qj67_2436_c1
557 nmdc:mga0qj67_28301_c1
558 nmdc:mga0qj67_67403_c1
559 nmdc:mga06r32_5514_c1
560 nmdc:mga06r32_64110_c1
561 nmdc:mga08y16_195_c1
562 nmdc:mga08y16_19906_c1
563 nmdc:mga08y16_208039_c1
564 nmdc:mga08y16_23568_c1
565 nmdc:mga08y16_2530_c1
566 nmdc:mga08y16_40506_c1
567 nmdc:mga08y16_4556_c1
568 nmdc:mga08y16_53015_c1
569 nmdc:mga0n895_281_c1
570 nmdc:mga0n895_35411_c1
571 nmdc:mga0n895_73517_c1
572 nmdc:mga0n895_77683_c1
573 nmdc:mga0n895_90084_c1
574 nmdc:mga0rr50_12769_c1
575 nmdc:mga0rr50_27027_c1
576 nmdc:mga0rr50_99442_c1
577 nmdc:mga0a205_22196_c1
578 nmdc:mga0a205_34105_c1
579 nmdc:mga0a205_36003_c1
580 nmdc:mga0a205_44476_c1
581 nmdc:mga0a205_469_c1
582 Ga0500568_0001181
583 Ga0500616_0001373
584 Ga0500645_000862
585 Ga0590071_000119
586 Ga0590071_000139
587 Ga0590074_000082
588 Ga0590075_000216
589 Ga0590075_001109
590 Ga0590077_000315
591 Ga0590077_000518
592 Ga0530510_0024499

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22608

DNAX_ATPase_lid

DNA polymerase III clamp loader subunit, ATPase lid domain

183

231

0.97

PF12169

DNA_pol3_gamma3

DNA polymerase III subunits gamma and tau domain III

233

374

0.96

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

20

180

0.96

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

41

179

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.9127 5 243
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.9055 5 243
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.8577 3 241
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.8469 3 241
2chq-assembly1.cif.gz_A replication factor c adpnp complex 0.8439 5 364
ID Description Score Start End Superfamily
af_Q54BN3_188_243_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9809 180 228 1.10.8.60
af_Q2G0T5_170_234_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9765 179 243 1.10.8.60
af_A0A1D6E842_267_330_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9643 179 243 1.10.8.60
af_F4KEM0_516_577_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9637 184 243 1.10.8.60
af_Q2G0T5_170_234_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9621 179 243 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A352KSY1-F1-model_v4 Uncharacterized protein 0.9627 132 361 GO:0003677
GO:0003887
GO:0006261
AF-A0A7X2MT47-F1-model_v4 DNA polymerase III subunit gamma/tau (EC 2.7.7.7) 0.9611 30 216 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
GO:0046872
AF-A0A7X2MT47-F1-model_v4 DNA polymerase III subunit gamma/tau (EC 2.7.7.7) 0.9462 30 216 GO:0003887
GO:0005524
GO:0006261
GO:0009360
GO:0016887
GO:0046872
AF-A0A352KSY1-F1-model_v4 Uncharacterized protein 0.9388 132 361 GO:0003677
GO:0003887
GO:0006261
AF-A0A7V5MHJ3-F1-model_v4 DNA polymerase III subunit gamma/tau (EC 2.7.7.7) 0.9355 6 167 GO:0003887
GO:0005524
GO:0006261
GO:0009360

Map