F393100

General Info

Members Datasets Scaffolds Average Seq Length
296 153 592 296

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10024670|Ga0081539_100246703
Length 348
Sequence MVILRQTMRILRASQYFTRQTKPYKKAGKEVIMKTLSFRIVQLIAVLALVTGVATLATRKSRGQSPAAKNESQQKTESPKPETLVKPTIMTPDRAPVNAAATSPFADAVAQNALLKNDLIWTFGSKQQHGWYLYDLLIGRTLNLKPDASTSDLASAIATWQKQNGLTATGIIDEDSWMTFVSAWQSNRLKDKTPATADQLLTAPPSDFYDPARLEELRQVEKTTYAAYKQMLAAAIADPSLKLQHTSPTELAANEKFFKIVSSFRSREYQEKLRRESPNAGSAGLAVNSPHFTGRALDLYVGGDPVDTKDANRAIQVNTPAYQWLVLNAERFGFRPYFYEPWHWEYVR

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
141 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
142 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
143 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
144 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.35
Rhizosphere 97.64
Stem 0
Stem Tuber 0
Unclassified 16.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10024670 3300005985 Bacteria 3894
2 JGI24748J21848_1000028 3300002074 Bacteria 91962
3 JGI24034J26672_10000051 3300002239 Bacteria 49831
4 rootL2_10071438 3300003322 Bacteria 3945
5 Ga0065715_10094147 3300005293 Unclassified 4429
6 Ga0065707_10001238 3300005295 Bacteria 7299
7 Ga0070690_100006762 3300005330 Bacteria 6516
8 Ga0070690_100007897 3300005330 Bacteria 6103
9 Ga0070690_100263133 3300005330 Bacteria 1224
10 Ga0070670_100072179 3300005331 Bacteria 2964
11 Ga0070670_100152199 3300005331 Bacteria 2002
12 Ga0068869_100011335 3300005334 Bacteria 5843
13 Ga0068869_100044518 3300005334 Bacteria 3192
14 Ga0068869_100198145 3300005334 Unclassified 1582
15 Ga0068869_100453951 3300005334 Bacteria 1063
16 Ga0070666_10011304 3300005335 Bacteria 5602
17 Ga0070680_100002849 3300005336 Bacteria 12860
18 Ga0070682_100067563 3300005337 Bacteria 2277
19 Ga0068868_100015167 3300005338 Bacteria 5693
20 Ga0068868_100025445 3300005338 Bacteria 4502
21 Ga0070689_100000241 3300005340 Bacteria 32082
22 Ga0070689_100026504 3300005340 Bacteria 4364
23 Ga0070687_100002878 3300005343 Bacteria 6577
24 Ga0070692_10027354 3300005345 Bacteria 2826
25 Ga0070692_10080101 3300005345 Bacteria 1757
26 Ga0070669_100004587 3300005353 Bacteria 9976
27 Ga0070669_100310420 3300005353 Bacteria 1271
28 Ga0070671_100030466 3300005355 Unclassified 4452
29 Ga0070673_100081614 3300005364 Unclassified 2622
30 Ga0070688_100015504 3300005365 Bacteria 4339
31 Ga0070667_100090732 3300005367 Bacteria 2627
32 Ga0070703_10000292 3300005406 Bacteria 23144
33 Ga0070703_10024859 3300005406 Bacteria 1773
34 Ga0070701_10082840 3300005438 Bacteria 1741
35 Ga0070701_10115871 3300005438 Unclassified 1503
36 Ga0070705_100029422 3300005440 Bacteria 3021
37 Ga0070705_100069782 3300005440 Bacteria 2120
38 Ga0070705_100262801 3300005440 Bacteria 1218
39 Ga0070700_100002361 3300005441 Bacteria 9608
40 Ga0070700_100394538 3300005441 Bacteria 1039
41 Ga0070694_100000993 3300005444 Bacteria 16087
42 Ga0070708_100221098 3300005445 Unclassified 1776
43 Ga0070678_100249100 3300005456 Bacteria 1489
44 Ga0070662_100015255 3300005457 Bacteria 5143
45 Ga0070681_10009990 3300005458 Bacteria 9358
46 Ga0070698_100000847 3300005471 Bacteria 33519
47 Ga0070698_100000886 3300005471 Bacteria 32912
48 Ga0070698_100211432 3300005471 Bacteria 1874
49 Ga0070698_100272037 3300005471 Bacteria 1626
50 Ga0070699_100125592 3300005518 Bacteria 2258
51 Ga0070679_100004597 3300005530 Bacteria 12743
52 Ga0070679_100086621 3300005530 Bacteria 3119
53 Ga0070684_100590484 3300005535 Unclassified 1032
54 Ga0070697_100000117 3300005536 Bacteria 62404
55 Ga0070697_100000322 3300005536 Bacteria 37966
56 Ga0070672_100076794 3300005543 Bacteria 2669
57 Ga0070686_100055760 3300005544 Bacteria 2533
58 Ga0070695_100346515 3300005545 Unclassified 1112
59 Ga0070696_100052822 3300005546 Bacteria 2827
60 Ga0070696_100116191 3300005546 Bacteria 1932
61 Ga0070696_100292179 3300005546 Bacteria 1245
62 Ga0070693_100267716 3300005547 Unclassified 1139
63 Ga0070704_100450601 3300005549 Bacteria 1108
64 Ga0070664_100206656 3300005564 Bacteria 1754
65 Ga0068857_100105039 3300005577 Bacteria 2536
66 Ga0068857_100255702 3300005577 Bacteria 1607
67 Ga0068857_100495696 3300005577 Bacteria 1146
68 Ga0068854_100075714 3300005578 Bacteria 2472
69 Ga0068856_100074800 3300005614 Unclassified 3354
70 Ga0070702_100021272 3300005615 Bacteria 3411
71 Ga0070702_100186714 3300005615 Bacteria 1361
72 Ga0068852_100051443 3300005616 Unclassified 3535
73 Ga0068852_100611815 3300005616 Bacteria 1095
74 Ga0068859_100010698 3300005617 Bacteria 9235
75 Ga0068859_100067572 3300005617 Bacteria 3609
76 Ga0068859_100074482 3300005617 Unclassified 3434
77 Ga0068859_100122566 3300005617 Unclassified 2667
78 Ga0068859_100137938 3300005617 Bacteria 2513
79 Ga0068859_100195063 3300005617 Bacteria 2109
80 Ga0068859_100196886 3300005617 Bacteria 2099
81 Ga0068864_100003197 3300005618 Bacteria 13534
82 Ga0068864_100181891 3300005618 Bacteria 1922
83 Ga0068866_10003396 3300005718 Bacteria 6525
84 Ga0068861_100085343 3300005719 Bacteria 2479
85 Ga0068851_10118231 3300005834 Unclassified 1422
86 Ga0068863_100016082 3300005841 Bacteria 7175
87 Ga0068863_100107166 3300005841 Bacteria 2659
88 Ga0068863_100299451 3300005841 Bacteria 1560
89 Ga0068858_100000567 3300005842 Bacteria 38567
90 Ga0068858_100195947 3300005842 Unclassified 1909
91 Ga0068860_100432435 3300005843 Bacteria 1306
92 Ga0068862_100028146 3300005844 Bacteria 4732
93 Ga0068862_100033020 3300005844 Bacteria 4372
94 Ga0068862_100199722 3300005844 Bacteria 1802
95 Ga0070715_10000063 3300006163 Bacteria 34937
96 Ga0097621_100001470 3300006237 Bacteria 16123
97 Ga0097621_100023155 3300006237 Bacteria 4832
98 Ga0068871_100006965 3300006358 Bacteria 8054
99 Ga0068871_100016337 3300006358 Bacteria 5588
100 Ga0068871_100287519 3300006358 Bacteria 1440
101 Ga0075428_100194622 3300006844 Bacteria 2193
102 Ga0075430_100192453 3300006846 Bacteria 1695
103 Ga0075433_10015759 3300006852 Bacteria 6212
104 Ga0075433_10214758 3300006852 Unclassified 1709
105 Ga0075433_10417026 3300006852 Bacteria 1184
106 Ga0075434_100008854 3300006871 Bacteria 9368
107 Ga0075434_100100453 3300006871 Bacteria 2899
108 Ga0075434_100115066 3300006871 Bacteria 2702
109 Ga0068865_100359308 3300006881 Unclassified 1182
110 Ga0075436_100000026 3300006914 Bacteria 102984
111 Ga0097620_100010698 3300006931 Bacteria 9235
112 Ga0097620_100067570 3300006931 Bacteria 3609
113 Ga0097620_100074482 3300006931 Unclassified 3434
114 Ga0097620_100122564 3300006931 Unclassified 2667
115 Ga0097620_100137929 3300006931 Bacteria 2513
116 Ga0097620_100195042 3300006931 Bacteria 2109
117 Ga0097620_100196902 3300006931 Bacteria 2099
118 Ga0075435_100001054 3300007076 Bacteria 17473
119 Ga0075435_100203012 3300007076 Bacteria 1680
120 Ga0111539_10008429 3300009094 Bacteria 13115
121 Ga0111539_10023766 3300009094 Bacteria 7530
122 Ga0111539_10080194 3300009094 Bacteria 3839
123 Ga0111539_10102358 3300009094 Unclassified 3361
124 Ga0111539_10214526 3300009094 Archaea 2242
125 Ga0111539_10370461 3300009094 Bacteria 1667
126 Ga0111539_10595733 3300009094 Bacteria 1287
127 Ga0105245_10162275 3300009098 Bacteria 2122
128 Ga0105247_10000252 3300009101 Bacteria 49875
129 Ga0105247_10047058 3300009101 Bacteria 2649
130 Ga0114129_10007363 3300009147 Bacteria 15668
131 Ga0114129_10013709 3300009147 Bacteria 11551
132 Ga0114129_10019813 3300009147 Bacteria 9573
133 Ga0114129_10090796 3300009147 Bacteria 4233
134 Ga0114129_10121481 3300009147 Unclassified 3594
135 Ga0114129_10294766 3300009147 Bacteria 2164
136 Ga0114129_10407821 3300009147 Bacteria 1790
137 Ga0114129_10464747 3300009147 Unclassified 1658
138 Ga0105243_10000338 3300009148 Bacteria 51096
139 Ga0105243_10000628 3300009148 Bacteria 35191
140 Ga0105243_10368242 3300009148 Bacteria 1325
141 Ga0105242_10000080 3300009176 Bacteria 66010
142 Ga0105242_10000204 3300009176 Bacteria 46259
143 Ga0105242_10123324 3300009176 Bacteria 2227
144 Ga0105248_10001532 3300009177 Bacteria 25745
145 Ga0105248_10020442 3300009177 Bacteria 7336
146 Ga0105248_10200738 3300009177 Unclassified 2247
147 Ga0105248_10309059 3300009177 Bacteria 1780
148 Ga0105248_10413413 3300009177 Bacteria 1519
149 Ga0105248_10574518 3300009177 Unclassified 1272
150 Ga0105237_10070018 3300009545 Unclassified 3503
151 Ga0105237_10443417 3300009545 Bacteria 1304
152 Ga0105249_10020889 3300009553 Bacteria 5855
153 Ga0105249_10043953 3300009553 Bacteria 4063
154 Ga0105249_10057220 3300009553 Bacteria 3571
155 Ga0105249_10124348 3300009553 Bacteria 2455
156 Ga0105249_10150260 3300009553 Bacteria 2242
157 Ga0105239_10124015 3300010375 Unclassified 2870
158 Ga0105239_10316351 3300010375 Bacteria 1760
159 Ga0105246_10038529 3300011119 Bacteria 3215
160 Ga0157373_10005207 3300013100 Bacteria 9773
161 Ga0157374_10073667 3300013296 Unclassified 3223
162 Ga0157378_10000223 3300013297 Bacteria 55279
163 Ga0157378_10001707 3300013297 Bacteria 19756
164 Ga0157378_10012835 3300013297 Bacteria 7332
165 Ga0157378_10096361 3300013297 Bacteria 2696
166 Ga0157378_10104422 3300013297 Bacteria 2590
167 Ga0157378_10474757 3300013297 Bacteria 1245
168 Ga0157378_10573596 3300013297 Bacteria 1136
169 Ga0163162_10001063 3300013306 Bacteria 25504
170 Ga0163162_10006131 3300013306 Bacteria 11642
171 Ga0163162_10023513 3300013306 Bacteria 6082
172 Ga0163162_10117708 3300013306 Bacteria 2759
173 Ga0163162_10437717 3300013306 Bacteria 1440
174 Ga0163162_10591027 3300013306 Bacteria 1237
175 Ga0157375_10082349 3300013308 Bacteria 3260
176 Ga0157375_10100916 3300013308 Bacteria 2968
177 Ga0157375_10519093 3300013308 Bacteria 1354
178 Ga0163163_10002956 3300014325 Bacteria 14373
179 Ga0163163_10003248 3300014325 Bacteria 13786
180 Ga0163163_10122951 3300014325 Bacteria 2630
181 Ga0163163_10187316 3300014325 Bacteria 2117
182 Ga0157380_10002594 3300014326 Bacteria 12217
183 Ga0157380_10014474 3300014326 Bacteria 5772
184 Ga0157379_10105853 3300014968 Unclassified 2525
185 Ga0157376_10012340 3300014969 Bacteria 6338
186 Ga0157376_10145885 3300014969 Bacteria 2128
187 Ga0207672_1000070 3300025223 Bacteria 13639
188 Ga0207653_10000190 3300025885 Bacteria 42234
189 Ga0207653_10001087 3300025885 Bacteria 8922
190 Ga0207642_10103570 3300025899 Bacteria 1434
191 Ga0207710_10000001 3300025900 Bacteria 1797433
192 Ga0207680_10098788 3300025903 Bacteria 1872
193 Ga0207647_10009004 3300025904 Bacteria 7114
194 Ga0207685_10000041 3300025905 Bacteria 57491
195 Ga0207699_10120068 3300025906 Bacteria 1699
196 Ga0207645_10154697 3300025907 Unclassified 1498
197 Ga0207643_10000723 3300025908 Bacteria 20288
198 Ga0207684_10007229 3300025910 Bacteria 10037
199 Ga0207707_10000024 3300025912 Bacteria 183501
200 Ga0207660_10013460 3300025917 Bacteria 5361
201 Ga0207662_10001395 3300025918 Bacteria 11673
202 Ga0207662_10193852 3300025918 Bacteria 1312
203 Ga0207662_10346617 3300025918 Bacteria 996
204 Ga0207652_10003631 3300025921 Bacteria 12711
205 Ga0207652_10064040 3300025921 Bacteria 3181
206 Ga0207646_10192060 3300025922 Bacteria 1844
207 Ga0207681_10016336 3300025923 Bacteria 4642
208 Ga0207644_10000322 3300025931 Bacteria 31217
209 Ga0207644_10003313 3300025931 Bacteria 10405
210 Ga0207644_10341466 3300025931 Bacteria 1214
211 Ga0207686_10000109 3300025934 Bacteria 66014
212 Ga0207686_10261452 3300025934 Bacteria 1269
213 Ga0207709_10000025 3300025935 Bacteria 364795
214 Ga0207709_10002952 3300025935 Bacteria 10371
215 Ga0207670_10000365 3300025936 Bacteria 26237
216 Ga0207704_10046703 3300025938 Bacteria 2583
217 Ga0207665_10047952 3300025939 Bacteria 2866
218 Ga0207691_10093063 3300025940 Bacteria 2699
219 Ga0207711_10018722 3300025941 Bacteria 5757
220 Ga0207711_10214030 3300025941 Unclassified 1761
221 Ga0207711_10280449 3300025941 Bacteria 1534
222 Ga0207689_10034450 3300025942 Bacteria 4206
223 Ga0207689_10042355 3300025942 Bacteria 3767
224 Ga0207689_10074609 3300025942 Bacteria 2787
225 Ga0207689_10221198 3300025942 Unclassified 1564
226 Ga0207689_10449107 3300025942 Bacteria 1077
227 Ga0207651_10243309 3300025960 Bacteria 1468
228 Ga0207712_10030357 3300025961 Unclassified 3633
229 Ga0207712_10034026 3300025961 Bacteria 3449
230 Ga0207658_10027866 3300025986 Unclassified 3974
231 Ga0207677_10008298 3300026023 Bacteria 5791
232 Ga0207703_10001462 3300026035 Bacteria 21560
233 Ga0207703_10211236 3300026035 Bacteria 1730
234 Ga0207708_10004684 3300026075 Bacteria 10060
235 Ga0207708_10009835 3300026075 Bacteria 7097
236 Ga0207708_10275988 3300026075 Bacteria 1361
237 Ga0207641_10108544 3300026088 Bacteria 2456
238 Ga0207648_10109246 3300026089 Bacteria 2427
239 Ga0207676_10016049 3300026095 Bacteria 5417
240 Ga0207676_10025186 3300026095 Bacteria 4413
241 Ga0207674_10021119 3300026116 Bacteria 7019
242 Ga0207674_10511057 3300026116 Unclassified 1160
243 Ga0207674_10533078 3300026116 Bacteria 1134
244 Ga0207675_100002301 3300026118 Bacteria 18970
245 Ga0207675_100013727 3300026118 Bacteria 7556
246 Ga0207675_100045648 3300026118 Bacteria 4094
247 Ga0207675_100557199 3300026118 Unclassified 1146
248 Ga0207428_10007935 3300027907 Bacteria 9647
249 Ga0268265_10050998 3300028380 Bacteria 3121
250 Ga0268265_10113826 3300028380 Bacteria 2214
251 Ga0268264_10035405 3300028381 Unclassified 4111
252 Ga0268264_10092515 3300028381 Unclassified 2611
253 Ga0268264_10328873 3300028381 Bacteria 1448
254 Ga0268264_10548309 3300028381 Bacteria 1134
255 Ga0307416_100281162 3300032002 Unclassified 1641
256 Ga0307416_100435881 3300032002 Bacteria 1359
257 Ga0307415_100113301 3300032126 Unclassified 2017
258 Ga0395898_0574381 3300037466 Bacteria 1070
259 Ga0395905_0059232 3300037471 Bacteria 3580
260 Ga0242420_003569 3300038996 Bacteria 2304
261 Ga0242420_015900 3300038996 Unclassified 1305
262 Ga0436365_0665296 3300039437 Bacteria 181221
263 Ga0436365_1373968 3300039437 Bacteria 22336
264 Ga0451576_0073360 3300045051 Bacteria 3561
265 Ga0451576_0202944 3300045051 Bacteria 2071
266 Ga0451576_0276397 3300045051 Bacteria 1756
267 Ga0495586_0118651 3300046535 Bacteria 1477
268 Ga0495670_0136657 3300046691 Unclassified 1280
269 Ga0496104_0067045 3300048907 Unclassified 3409
270 Ga0496104_0111844 3300048907 Bacteria 2619
271 Ga0496106_0017360 3300048909 Bacteria 5325
272 Ga0496112_0326778 3300048915 Bacteria 1478
273 Ga0501292_027644 3300049515 Unclassified 941
274 Ga0501299_045914 3300049522 Unclassified 890
275 Ga0501251_014379 3300049681 Bacteria 982
276 Ga0501225_0013694 3300049705 Bacteria 2269
277 Ga0501273_003977 3300049770 Bacteria 1601
278 nmdc:mga05p37_133672_c1 3300050507 Bacteria 3043
279 nmdc:mga05p37_48552_c1 3300050507 Bacteria 5220
280 nmdc:mga09592_102330_c1 3300050508 Bacteria 2454
281 nmdc:mga09592_530395_c1 3300050508 Bacteria 1012
282 nmdc:mga06r32_130277_c1 3300050510 Bacteria 2487
283 nmdc:mga08y16_2859_c1 3300050511 Bacteria 17755
284 nmdc:mga08y16_4918_c1 3300050511 Bacteria 13971
285 nmdc:mga0n895_144961_c1 3300050512 Bacteria 2404
286 nmdc:mga0n895_160011_c1 3300050512 Unclassified 2283
287 nmdc:mga0n895_257553_c1 3300050512 Bacteria 1771
288 nmdc:mga0rr50_192388_c1 3300050513 Unclassified 1672
289 nmdc:mga0rr50_576_c1 3300050513 Bacteria 19684
290 nmdc:mga08x19_26_c1 3300050514 Bacteria 228913
291 nmdc:mga0a205_161783_c1 3300050515 Bacteria 2135
292 nmdc:mga0a205_220941_c1 3300050515 Unclassified 1780
293 nmdc:mga0a205_231487_c1 3300050515 Bacteria 1731
294 nmdc:mga0a205_273506_c1 3300050515 Unclassified 1566
295 nmdc:mga0a205_366316_c1 3300050515 Bacteria 1307
296 Ga0530510_0092415 3300061734 Bacteria 2208
297 Ga0081539_10024670
298 JGI24748J21848_1000028
299 JGI24034J26672_10000051
300 rootL2_10071438
301 Ga0065715_10094147
302 Ga0065707_10001238
303 Ga0070690_100006762
304 Ga0070690_100007897
305 Ga0070690_100263133
306 Ga0070670_100072179
307 Ga0070670_100152199
308 Ga0068869_100011335
309 Ga0068869_100044518
310 Ga0068869_100198145
311 Ga0068869_100453951
312 Ga0070666_10011304
313 Ga0070680_100002849
314 Ga0070682_100067563
315 Ga0068868_100015167
316 Ga0068868_100025445
317 Ga0070689_100000241
318 Ga0070689_100026504
319 Ga0070687_100002878
320 Ga0070692_10027354
321 Ga0070692_10080101
322 Ga0070669_100004587
323 Ga0070669_100310420
324 Ga0070671_100030466
325 Ga0070673_100081614
326 Ga0070688_100015504
327 Ga0070667_100090732
328 Ga0070703_10000292
329 Ga0070703_10024859
330 Ga0070701_10082840
331 Ga0070701_10115871
332 Ga0070705_100029422
333 Ga0070705_100069782
334 Ga0070705_100262801
335 Ga0070700_100002361
336 Ga0070700_100394538
337 Ga0070694_100000993
338 Ga0070708_100221098
339 Ga0070678_100249100
340 Ga0070662_100015255
341 Ga0070681_10009990
342 Ga0070698_100000847
343 Ga0070698_100000886
344 Ga0070698_100211432
345 Ga0070698_100272037
346 Ga0070699_100125592
347 Ga0070679_100004597
348 Ga0070679_100086621
349 Ga0070684_100590484
350 Ga0070697_100000117
351 Ga0070697_100000322
352 Ga0070672_100076794
353 Ga0070686_100055760
354 Ga0070695_100346515
355 Ga0070696_100052822
356 Ga0070696_100116191
357 Ga0070696_100292179
358 Ga0070693_100267716
359 Ga0070704_100450601
360 Ga0070664_100206656
361 Ga0068857_100105039
362 Ga0068857_100255702
363 Ga0068857_100495696
364 Ga0068854_100075714
365 Ga0068856_100074800
366 Ga0070702_100021272
367 Ga0070702_100186714
368 Ga0068852_100051443
369 Ga0068852_100611815
370 Ga0068859_100010698
371 Ga0068859_100067572
372 Ga0068859_100074482
373 Ga0068859_100122566
374 Ga0068859_100137938
375 Ga0068859_100195063
376 Ga0068859_100196886
377 Ga0068864_100003197
378 Ga0068864_100181891
379 Ga0068866_10003396
380 Ga0068861_100085343
381 Ga0068851_10118231
382 Ga0068863_100016082
383 Ga0068863_100107166
384 Ga0068863_100299451
385 Ga0068858_100000567
386 Ga0068858_100195947
387 Ga0068860_100432435
388 Ga0068862_100028146
389 Ga0068862_100033020
390 Ga0068862_100199722
391 Ga0070715_10000063
392 Ga0097621_100001470
393 Ga0097621_100023155
394 Ga0068871_100006965
395 Ga0068871_100016337
396 Ga0068871_100287519
397 Ga0075428_100194622
398 Ga0075430_100192453
399 Ga0075433_10015759
400 Ga0075433_10214758
401 Ga0075433_10417026
402 Ga0075434_100008854
403 Ga0075434_100100453
404 Ga0075434_100115066
405 Ga0068865_100359308
406 Ga0075436_100000026
407 Ga0097620_100010698
408 Ga0097620_100067570
409 Ga0097620_100074482
410 Ga0097620_100122564
411 Ga0097620_100137929
412 Ga0097620_100195042
413 Ga0097620_100196902
414 Ga0075435_100001054
415 Ga0075435_100203012
416 Ga0111539_10008429
417 Ga0111539_10023766
418 Ga0111539_10080194
419 Ga0111539_10102358
420 Ga0111539_10214526
421 Ga0111539_10370461
422 Ga0111539_10595733
423 Ga0105245_10162275
424 Ga0105247_10000252
425 Ga0105247_10047058
426 Ga0114129_10007363
427 Ga0114129_10013709
428 Ga0114129_10019813
429 Ga0114129_10090796
430 Ga0114129_10121481
431 Ga0114129_10294766
432 Ga0114129_10407821
433 Ga0114129_10464747
434 Ga0105243_10000338
435 Ga0105243_10000628
436 Ga0105243_10368242
437 Ga0105242_10000080
438 Ga0105242_10000204
439 Ga0105242_10123324
440 Ga0105248_10001532
441 Ga0105248_10020442
442 Ga0105248_10200738
443 Ga0105248_10309059
444 Ga0105248_10413413
445 Ga0105248_10574518
446 Ga0105237_10070018
447 Ga0105237_10443417
448 Ga0105249_10020889
449 Ga0105249_10043953
450 Ga0105249_10057220
451 Ga0105249_10124348
452 Ga0105249_10150260
453 Ga0105239_10124015
454 Ga0105239_10316351
455 Ga0105246_10038529
456 Ga0157373_10005207
457 Ga0157374_10073667
458 Ga0157378_10000223
459 Ga0157378_10001707
460 Ga0157378_10012835
461 Ga0157378_10096361
462 Ga0157378_10104422
463 Ga0157378_10474757
464 Ga0157378_10573596
465 Ga0163162_10001063
466 Ga0163162_10006131
467 Ga0163162_10023513
468 Ga0163162_10117708
469 Ga0163162_10437717
470 Ga0163162_10591027
471 Ga0157375_10082349
472 Ga0157375_10100916
473 Ga0157375_10519093
474 Ga0163163_10002956
475 Ga0163163_10003248
476 Ga0163163_10122951
477 Ga0163163_10187316
478 Ga0157380_10002594
479 Ga0157380_10014474
480 Ga0157379_10105853
481 Ga0157376_10012340
482 Ga0157376_10145885
483 Ga0207672_1000070
484 Ga0207653_10000190
485 Ga0207653_10001087
486 Ga0207642_10103570
487 Ga0207710_10000001
488 Ga0207680_10098788
489 Ga0207647_10009004
490 Ga0207685_10000041
491 Ga0207699_10120068
492 Ga0207645_10154697
493 Ga0207643_10000723
494 Ga0207684_10007229
495 Ga0207707_10000024
496 Ga0207660_10013460
497 Ga0207662_10001395
498 Ga0207662_10193852
499 Ga0207662_10346617
500 Ga0207652_10003631
501 Ga0207652_10064040
502 Ga0207646_10192060
503 Ga0207681_10016336
504 Ga0207644_10000322
505 Ga0207644_10003313
506 Ga0207644_10341466
507 Ga0207686_10000109
508 Ga0207686_10261452
509 Ga0207709_10000025
510 Ga0207709_10002952
511 Ga0207670_10000365
512 Ga0207704_10046703
513 Ga0207665_10047952
514 Ga0207691_10093063
515 Ga0207711_10018722
516 Ga0207711_10214030
517 Ga0207711_10280449
518 Ga0207689_10034450
519 Ga0207689_10042355
520 Ga0207689_10074609
521 Ga0207689_10221198
522 Ga0207689_10449107
523 Ga0207651_10243309
524 Ga0207712_10030357
525 Ga0207712_10034026
526 Ga0207658_10027866
527 Ga0207677_10008298
528 Ga0207703_10001462
529 Ga0207703_10211236
530 Ga0207708_10004684
531 Ga0207708_10009835
532 Ga0207708_10275988
533 Ga0207641_10108544
534 Ga0207648_10109246
535 Ga0207676_10016049
536 Ga0207676_10025186
537 Ga0207674_10021119
538 Ga0207674_10511057
539 Ga0207674_10533078
540 Ga0207675_100002301
541 Ga0207675_100013727
542 Ga0207675_100045648
543 Ga0207675_100557199
544 Ga0207428_10007935
545 Ga0268265_10050998
546 Ga0268265_10113826
547 Ga0268264_10035405
548 Ga0268264_10092515
549 Ga0268264_10328873
550 Ga0268264_10548309
551 Ga0307416_100281162
552 Ga0307416_100435881
553 Ga0307415_100113301
554 Ga0395898_0574381
555 Ga0395905_0059232
556 Ga0242420_003569
557 Ga0242420_015900
558 Ga0436365_0665296
559 Ga0436365_1373968
560 Ga0451576_0073360
561 Ga0451576_0202944
562 Ga0451576_0276397
563 Ga0495586_0118651
564 Ga0495670_0136657
565 Ga0496104_0067045
566 Ga0496104_0111844
567 Ga0496106_0017360
568 Ga0496112_0326778
569 Ga0501292_027644
570 Ga0501299_045914
571 Ga0501251_014379
572 Ga0501225_0013694
573 Ga0501273_003977
574 nmdc:mga05p37_133672_c1
575 nmdc:mga05p37_48552_c1
576 nmdc:mga09592_102330_c1
577 nmdc:mga09592_530395_c1
578 nmdc:mga06r32_130277_c1
579 nmdc:mga08y16_2859_c1
580 nmdc:mga08y16_4918_c1
581 nmdc:mga0n895_144961_c1
582 nmdc:mga0n895_160011_c1
583 nmdc:mga0n895_257553_c1
584 nmdc:mga0rr50_192388_c1
585 nmdc:mga0rr50_576_c1
586 nmdc:mga08x19_26_c1
587 nmdc:mga0a205_161783_c1
588 nmdc:mga0a205_220941_c1
589 nmdc:mga0a205_231487_c1
590 nmdc:mga0a205_273506_c1
591 nmdc:mga0a205_366316_c1
592 Ga0530510_0092415

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02557

VanY

D-alanyl-D-alanine carboxypeptidase

218

348

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4c2h-assembly1.cif.gz_B crystal structure of the ctpb(v118y) mutant 0.7712 108 162
4c2e-assembly1.cif.gz_B crystal structure of the protease ctpb(s309a) present in a resting state 0.7556 108 162
4g54-assembly1.cif.gz_A crystal structure of a periplasmic domain of the epsab fusion protein of the vibrio vulnificus type ii secretion system 0.7507 108 155
4jid-assembly1.cif.gz_A crystal structure of baldcb / vany-like l,d-carboxypeptidase zinc(ii)-free 0.709 166 322
5tv7-assembly2.cif.gz_B 2.05 angstrom resolution crystal structure of peptidoglycan-binding protein from clostridioides difficile in complex with glutamine hydroxamate. 0.657 107 155
ID Description Score Start End Superfamily
af_Q9WTR0_33_298_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.8128 110 154 3.40.390.10
af_A0A2R8RUJ1_14_272_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.7448 110 162 3.40.390.10
1l6jA01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.7432 106 155 1.10.101.10
af_A0A0R4IB00_45_313_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.7372 106 153 3.40.390.10
1eakC01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.6664 108 155 1.10.101.10
ID Description Score Start End GO Terms
AF-A0A317I3E4-F1-model_v4 Peptidase M15B domain-containing protein 0.9861 153 323 GO:0006508
GO:0008233
AF-A0A317I3E4-F1-model_v4 Peptidase M15B domain-containing protein 0.9804 153 323 GO:0006508
GO:0008233
AF-A0A7V9C941-F1-model_v4 D-alanyl-D-alanine carboxypeptidase family protein 0.907 67 322 GO:0004180
GO:0006508
AF-A0A7V9NNR3-F1-model_v4 D-alanyl-D-alanine carboxypeptidase family protein 0.88 58 323 GO:0004180
GO:0006508
AF-A0A2V8M9Q1-F1-model_v4 D-alanyl-D-alanine carboxypeptidase 0.8761 222 323 GO:0004180
GO:0006508

Map