F393066

General Info

Members Datasets Scaffolds Average Seq Length
296 197 293 229

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100442182|Ga0070706_1004421822
Length 251
Sequence MREDRAVPVLVRNEVLKLRTIRSPWLLLVAAQAVVLAGVSGALVNADNIRDPALAVKAVAHVGLVSLFALVFGIMAVAGEYRHRTITDTYLATPRRSRVVVAKLGVYLIGGLGFGVAATVTALATAAIWLAARGVTLDLSSVELWRTIVGGIAWNAAFAAIGVGVGALIRNLAGAVAAALAWLAVVEGVVGELIGDEARRWLPFAAGTALGRLPAGGADALPQWGAGVLLTGYACLLALLALTVSVRRDVA

Samples

Sample ID Description Type Environment
1 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
2 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
3 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
101 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
102 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
103 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
104 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
107 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
108 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
109 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
110 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
114 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
119 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
120 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
123 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
124 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
138 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
139 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
140 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
141 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
142 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
143 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
144 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
145 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
146 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
150 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
151 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
152 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
153 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
154 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
155 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
156 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
157 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
158 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
159 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
160 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
161 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
162 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
163 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
164 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
165 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
166 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
167 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
168 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
169 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
170 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
171 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
172 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
173 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
174 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
175 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
181 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
182 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
183 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
194 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
195 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
196 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
197 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.97
Metatranscriptomes 1.01
Isolates 1.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.03
Nodule 0
Rhizoplane 4.73
Rhizosphere 84.8
Stem 0
Stem Tuber 0
Unclassified 8.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001274 3300003203 Bacteria 11833
2 JGI25406J46586_10010526 3300003203 Bacteria 4101
3 rootH1_10175192 3300003316 Unclassified 1069
4 rootH1_10090400 3300003323 Bacteria 1873
5 rootH1_10208635 3300003323 Bacteria 1073
6 Ga0070658_10039870 3300005327 Bacteria 3789
7 Ga0070683_100000383 3300005329 Bacteria 30748
8 Ga0070683_100666532 3300005329 Bacteria 996
9 Ga0070682_100100588 3300005337 Bacteria 1908
10 Ga0068868_100568268 3300005338 Bacteria 1001
11 Ga0070689_100119951 3300005340 Bacteria 2100
12 Ga0070661_100175663 3300005344 Bacteria 1628
13 Ga0070668_100215504 3300005347 Bacteria 1581
14 Ga0070659_100094355 3300005366 Bacteria 2402
15 Ga0070667_100011729 3300005367 Bacteria 7241
16 Ga0070667_100054026 3300005367 Bacteria 3391
17 Ga0070709_10084339 3300005434 Bacteria 2081
18 Ga0070709_10239055 3300005434 Unclassified 1303
19 Ga0070709_10746516 3300005434 Unclassified 764
20 Ga0070714_100209422 3300005435 Bacteria 1786
21 Ga0070714_100508455 3300005435 Unclassified 1149
22 Ga0070713_100260964 3300005436 Bacteria 1583
23 Ga0070705_100022170 3300005440 Bacteria 3390
24 Ga0070678_100039669 3300005456 Bacteria 3325
25 Ga0070681_10155077 3300005458 Bacteria 2215
26 Ga0070681_10300655 3300005458 Bacteria 1514
27 Ga0070706_100103413 3300005467 Bacteria 2648
28 Ga0070706_100442182 3300005467 Bacteria 1210
29 Ga0070684_100038383 3300005535 Bacteria 4114
30 Ga0070684_100110970 3300005535 Bacteria 2459
31 Ga0070684_100190336 3300005535 Bacteria 1867
32 Ga0070684_100525291 3300005535 Bacteria 1097
33 Ga0070672_100581563 3300005543 Unclassified 974
34 Ga0070665_100404100 3300005548 Bacteria 1374
35 Ga0070704_100157782 3300005549 Bacteria 1791
36 Ga0070664_100161506 3300005564 Bacteria 1983
37 Ga0070664_100609694 3300005564 Bacteria 1013
38 Ga0068857_100049426 3300005577 Bacteria 3731
39 Ga0068857_100624618 3300005577 Bacteria 1020
40 Ga0068856_100040123 3300005614 Bacteria 4597
41 Ga0068856_100329542 3300005614 Unclassified 1544
42 Ga0070702_100046979 3300005615 Bacteria 2450
43 Ga0068859_100181456 3300005617 Bacteria 2188
44 Ga0068864_100234110 3300005618 Bacteria 1699
45 Ga0068863_100113630 3300005841 Bacteria 2579
46 Ga0068858_100023035 3300005842 Bacteria 5808
47 Ga0068860_100008678 3300005843 Bacteria 10124
48 Ga0068860_100016142 3300005843 Bacteria 7286
49 Ga0068862_100226067 3300005844 Bacteria 1696
50 Ga0068862_100598260 3300005844 Bacteria 1058
51 Ga0081539_10000186 3300005985 Bacteria 147547
52 Ga0081539_10002256 3300005985 Bacteria 28025
53 Ga0081539_10065399 3300005985 Bacteria 1975
54 Ga0081539_10067123 3300005985 Bacteria 1941
55 Ga0075364_10113306 3300006051 Bacteria 1811
56 Ga0075367_10058659 3300006178 Bacteria 2291
57 Ga0097621_100717744 3300006237 Unclassified 921
58 Ga0068871_100106559 3300006358 Bacteria 2353
59 Ga0075428_100008590 3300006844 Bacteria 11326
60 Ga0075430_100100955 3300006846 Bacteria 2409
61 Ga0075431_100030957 3300006847 Bacteria 5511
62 Ga0075431_100244778 3300006847 Bacteria 1823
63 Ga0075434_100036713 3300006871 Bacteria 4847
64 Ga0075429_100010364 3300006880 Bacteria 8065
65 Ga0097620_100181459 3300006931 Bacteria 2188
66 Ga0075435_100077418 3300007076 Bacteria 2727
67 Ga0105240_10666443 3300009093 Bacteria 1139
68 Ga0105247_10181855 3300009101 Bacteria 1404
69 Ga0114129_10060073 3300009147 Bacteria 5315
70 Ga0105248_10087433 3300009177 Bacteria 3507
71 Ga0105238_10523297 3300009551 Bacteria 1189
72 Ga0105239_10196524 3300010375 Bacteria 2259
73 Ga0157369_10063431 3300013105 Bacteria 3981
74 Ga0157372_10149757 3300013307 Bacteria 2692
75 Ga0163163_10013192 3300014325 Bacteria 7552
76 Ga0157379_10037724 3300014968 Bacteria 4310
77 Ga0157379_10119993 3300014968 Bacteria 2365
78 Ga0206356_11327158 3300020070 Bacteria 1541
79 Ga0206353_11522686 3300020082 Bacteria 3321
80 Ga0207699_10007397 3300025906 Bacteria 5372
81 Ga0207699_10023499 3300025906 Bacteria 3355
82 Ga0207699_10541985 3300025906 Bacteria 843
83 Ga0207705_10244616 3300025909 Bacteria 1367
84 Ga0207684_10057555 3300025910 Bacteria 3299
85 Ga0207707_10464430 3300025912 Bacteria 1082
86 Ga0207693_10029021 3300025915 Bacteria 4372
87 Ga0207663_10020623 3300025916 Bacteria 3735
88 Ga0207652_10073153 3300025921 Bacteria 2981
89 Ga0207694_10261026 3300025924 Bacteria 1419
90 Ga0207700_10250628 3300025928 Unclassified 1512
91 Ga0207664_10031377 3300025929 Unclassified 4065
92 Ga0207664_10036341 3300025929 Bacteria 3807
93 Ga0207665_10013763 3300025939 Bacteria 5320
94 Ga0207711_10147119 3300025941 Bacteria 2123
95 Ga0207689_10254960 3300025942 Bacteria 1451
96 Ga0207661_10014879 3300025944 Bacteria 5708
97 Ga0207661_10230012 3300025944 Bacteria 1641
98 Ga0207679_10087305 3300025945 Bacteria 2401
99 Ga0207679_10145591 3300025945 Bacteria 1921
100 Ga0207712_10628100 3300025961 Bacteria 932
101 Ga0207658_10046088 3300025986 Bacteria 3182
102 Ga0207703_10023665 3300026035 Bacteria 4830
103 Ga0207702_10280826 3300026078 Bacteria 1574
104 Ga0207676_10302122 3300026095 Bacteria 1462
105 Ga0207676_10324062 3300026095 Bacteria 1415
106 Ga0207674_10058720 3300026116 Bacteria 3895
107 Ga0207674_10131409 3300026116 Bacteria 2466
108 Ga0207674_10182176 3300026116 Bacteria 2052
109 Ga0207674_10622519 3300026116 Unclassified 1042
110 Ga0207683_10099494 3300026121 Bacteria 2595
111 Ga0268265_10192204 3300028380 Bacteria 1764
112 Ga0268264_10019379 3300028381 Bacteria 5560
113 Ga0307517_10048118 3300028786 Bacteria 4399
114 Ga0307515_10029029 3300028794 Bacteria 9373
115 Ga0307515_10036253 3300028794 Bacteria 7986
116 Ga0307512_10003179 3300030522 Bacteria 19479
117 Ga0307512_10006053 3300030522 Bacteria 12389
118 Ga0307513_10024797 3300031456 Bacteria 6971
119 Ga0307513_10100544 3300031456 Bacteria 2917
120 Ga0307513_10418932 3300031456 Bacteria 1070
121 Ga0307509_10014756 3300031507 Bacteria 9161
122 Ga0307509_10211211 3300031507 Bacteria 1765
123 Ga0307509_10244544 3300031507 Bacteria 1584
124 Ga0307408_100281539 3300031548 Bacteria 1385
125 Ga0307508_10001576 3300031616 Bacteria 25444
126 Ga0307508_10017580 3300031616 Bacteria 6502
127 Ga0307508_10162913 3300031616 Bacteria 1834
128 Ga0316575_10000058 3300031665 Bacteria 27051
129 Ga0307516_10017406 3300031730 Bacteria 7494
130 Ga0307516_10019219 3300031730 Bacteria 7079
131 Ga0307516_10133879 3300031730 Bacteria 2255
132 Ga0307405_10015084 3300031731 Bacteria 4173
133 Ga0307405_10112535 3300031731 Bacteria 1847
134 Ga0307405_10405253 3300031731 Bacteria 1069
135 Ga0307406_10003716 3300031901 Bacteria 8306
136 Ga0307406_10150801 3300031901 Bacteria 1658
137 Ga0307406_10174428 3300031901 Bacteria 1559
138 Ga0307406_10275512 3300031901 Bacteria 1280
139 Ga0307406_10557984 3300031901 Bacteria 938
140 Ga0307412_10014825 3300031911 Bacteria 4607
141 Ga0307412_10711536 3300031911 Bacteria 863
142 Ga0307409_100000110 3300031995 Bacteria 30094
143 Ga0307409_100057092 3300031995 Bacteria 3023
144 Ga0307409_100138321 3300031995 Bacteria 2094
145 Ga0307409_100527329 3300031995 Bacteria 1155
146 Ga0307416_100021242 3300032002 Bacteria 4655
147 Ga0307416_100110122 3300032002 Bacteria 2424
148 Ga0307415_100000012 3300032126 Bacteria 84249
149 Ga0307415_100236817 3300032126 Bacteria 1474
150 Ga0307415_100249860 3300032126 Bacteria 1440
151 Ga0307415_100409314 3300032126 Bacteria 1160
152 Ga0307507_10082959 3300033179 Bacteria 2806
153 Ga0316214_1000424 3300033545 Bacteria 4280
154 Ga0316212_1004019 3300033547 Bacteria 2134
155 Ga0373930_0009393 3300034816 Bacteria 1730
156 Ga0373938_0018276 3300034957 Bacteria 1389
157 Ga0373934_0000007 3300035086 Bacteria 74186
158 Ga0373934_0004557 3300035086 Bacteria 5120
159 Ga0373940_0007436 3300035088 Bacteria 2473
160 Ga0373949_0009021 3300035090 Bacteria 2184
161 Ga0373951_0000264 3300035091 Bacteria 17218
162 Ga0373951_0031967 3300035091 Bacteria 1243
163 Ga0373952_0016611 3300035092 Bacteria 1499
164 Ga0373923_0022961 3300035111 Bacteria 2450
165 Ga0373923_0062775 3300035111 Bacteria 1581
166 Ga0373932_0003677 3300035112 Bacteria 3670
167 Ga0373936_0012579 3300035113 Bacteria 3222
168 Ga0373939_0012604 3300035114 Bacteria 2158
169 Ga0373941_0010658 3300035115 Bacteria 2355
170 Ga0373953_0000080 3300035117 Bacteria 23146
171 Ga0373953_0079152 3300035117 Bacteria 1364
172 Ga0373954_0001900 3300035118 Bacteria 8635
173 Ga0373954_0043500 3300035118 Bacteria 2095
174 Ga0373956_0000392 3300035119 Bacteria 17845
175 Ga0373956_0007139 3300035119 Bacteria 4494
176 Ga0373957_0004392 3300035120 Bacteria 4287
177 Ga0373960_0005242 3300035121 Bacteria 2996
178 Ga0373946_0172650 3300035171 Bacteria 1021
179 Ga0373955_0002167 3300035172 Bacteria 8501
180 Ga0373955_0076605 3300035172 Bacteria 1881
181 Ga0373942_0010157 3300035207 Bacteria 2210
182 Ga0373962_0017237 3300035242 Bacteria 1871
183 Ga0373924_0000775 3300035410 Bacteria 9925
184 Ga0373924_0001207 3300035410 Bacteria 8285
185 Ga0373931_0016936 3300035691 Bacteria 3595
186 Ga0373935_0110873 3300035692 Bacteria 1821
187 Ga0373935_0279787 3300035692 Bacteria 1174
188 Ga0373933_0000021 3300035724 Bacteria 96820
189 Ga0373937_0000032 3300036401 Bacteria 120148
190 Ga0372808_004321 3300036459 Bacteria 1806
191 Ga0373925_0000009 3300037068 Bacteria 243099
192 Ga0373925_0043391 3300037068 Bacteria 3337
193 Ga0373925_0145392 3300037068 Bacteria 1858
194 Ga0395899_0011083 3300037312 Bacteria 6905
195 Ga0395900_0163312 3300037418 Bacteria 2271
196 Ga0395898_0041042 3300037466 Bacteria 4573
197 Ga0395898_0055407 3300037466 Bacteria 3867
198 Ga0395898_0258894 3300037466 Bacteria 1659
199 Ga0395905_0354659 3300037471 Bacteria 1359
200 Ga0395901_0015094 3300038443 Bacteria 7856
201 Ga0395901_0570708 3300038443 Bacteria 1144
202 Ga0495592_0000143 3300046454 Bacteria 63228
203 Ga0495592_0031518 3300046454 Bacteria 4006
204 Ga0495629_0001715 3300046459 Bacteria 17217
205 Ga0495629_0014789 3300046459 Bacteria 5614
206 Ga0495641_0002868 3300046461 Bacteria 13335
207 Ga0495641_0011082 3300046461 Bacteria 5163
208 Ga0495651_0000010 3300046462 Bacteria 148763
209 Ga0495651_0000426 3300046462 Bacteria 32565
210 Ga0495651_0033588 3300046462 Bacteria 4001
211 Ga0495653_0000962 3300046463 Bacteria 22088
212 Ga0495582_0374916 3300046473 Bacteria 820
213 Ga0495639_0107478 3300046475 Bacteria 1321
214 Ga0495664_0088084 3300046477 Bacteria 1865
215 Ga0495594_0053043 3300046499 Bacteria 2233
216 Ga0495608_0000037 3300046511 Bacteria 125064
217 Ga0495608_0088022 3300046511 Bacteria 2011
218 Ga0495618_0014285 3300046514 Bacteria 4836
219 Ga0495628_0000884 3300046516 Bacteria 27634
220 Ga0495628_0094262 3300046516 Bacteria 2314
221 Ga0495630_0026336 3300046517 Bacteria 4304
222 Ga0495666_0010557 3300046526 Bacteria 4604
223 Ga0495652_0000135 3300046529 Bacteria 82725
224 Ga0495652_0002116 3300046529 Bacteria 20928
225 Ga0495652_0393086 3300046529 Unclassified 983
226 Ga0495665_0117292 3300046531 Bacteria 1394
227 Ga0495640_0028603 3300046533 Bacteria 4011
228 Ga0495587_0000024 3300046536 Bacteria 148753
229 Ga0495587_0045729 3300046536 Bacteria 2600
230 Ga0495645_0122867 3300046543 Bacteria 1826
231 Ga0495667_0000024 3300046559 Bacteria 168313
232 Ga0495667_0013985 3300046559 Bacteria 5419
233 Ga0495634_0017649 3300046642 Bacteria 5090
234 Ga0495634_0026685 3300046642 Bacteria 4029
235 Ga0495635_0103197 3300046663 Bacteria 1949
236 Ga0495588_0055421 3300046674 Bacteria 2046
237 Ga0495657_0000057 3300046675 Bacteria 98920
238 Ga0495599_0000323 3300046678 Bacteria 28558
239 Ga0495599_0031296 3300046678 Bacteria 3340
240 Ga0495623_0000947 3300046679 Bacteria 19547
241 Ga0495623_0036493 3300046679 Bacteria 3148
242 Ga0495646_0025405 3300046680 Bacteria 3725
243 Ga0495613_0039845 3300046689 Bacteria 3481
244 Ga0495613_0040987 3300046689 Bacteria 3429
245 Ga0495624_0087457 3300046690 Bacteria 1924
246 Ga0495600_0008997 3300046809 Bacteria 6153
247 Ga0495600_0015102 3300046809 Bacteria 4878
248 Ga0495600_0019485 3300046809 Bacteria 4332
249 Ga0495581_0023778 3300047315 Bacteria 3550
250 Ga0495581_0101970 3300047315 Bacteria 1667
251 Ga0495604_0000024 3300047317 Bacteria 148542
252 Ga0495604_0219757 3300047317 Bacteria 1308
253 Ga0495674_0046265 3300047319 Bacteria 3862
254 Ga0495672_0044231 3300047320 Bacteria 2673
255 Ga0495676_0099479 3300047321 Bacteria 2155
256 Ga0495676_0191271 3300047321 Bacteria 1427
257 Ga0495680_0000005 3300047322 Bacteria 168308
258 Ga0495680_0020804 3300047322 Bacteria 5508
259 Ga0495675_0000495 3300047444 Bacteria 25611
260 Ga0495675_0034599 3300047444 Bacteria 3225
261 Ga0495684_0008502 3300047471 Bacteria 7951
262 Ga0495602_0001952 3300048088 Bacteria 20685
263 Ga0495602_0048275 3300048088 Bacteria 3827
264 Ga0496101_0180494 3300048904 Bacteria 1625
265 Ga0496104_0065719 3300048907 Bacteria 3442
266 Ga0496104_0232223 3300048907 Bacteria 1756
267 Ga0496106_0014936 3300048909 Bacteria 5744
268 Ga0496108_0166783 3300048911 Bacteria 1904
269 Ga0496108_0473315 3300048911 Bacteria 1094
270 Ga0496109_0012395 3300048912 Bacteria 7361
271 Ga0496109_0444305 3300048912 Bacteria 1225
272 Ga0496110_0038844 3300048913 Bacteria 4143
273 Ga0496111_0178630 3300048914 Bacteria 1578
274 Ga0496111_0377496 3300048914 Unclassified 1048
275 Ga0496112_0156297 3300048915 Bacteria 2247
276 Ga0496112_0175746 3300048915 Bacteria 2106
277 Ga0496112_0236870 3300048915 Bacteria 1779
278 Ga0496126_0069660 3300048929 Bacteria 3136
279 nmdc:mga0yw44_176871_c1 3300050492 Bacteria 1403
280 nmdc:mga0yw44_47132_c1 3300050492 Bacteria 2592
281 nmdc:mga06z11_52412_c1 3300050494 Bacteria 2093
282 nmdc:mga05p37_64200_c1 3300050507 Bacteria 4518
283 nmdc:mga09592_40596_c1 3300050508 Bacteria 3910
284 nmdc:mga06r32_26974_c1 3300050510 Bacteria 5361
285 nmdc:mga0n895_55770_c1 3300050512 Bacteria 3890
286 nmdc:mga0rr50_26229_c1 3300050513 Bacteria 4062
287 nmdc:mga08x19_80871_c1 3300050514 Bacteria 2133
288 nmdc:mga0a205_99623_c1 3300050515 Bacteria 2804
289 Ga0495601_0019162 3300053077 Bacteria 4171
290 Ga0495612_0018138 3300053078 Bacteria 2817
291 Ga0495595_0000260 3300053084 Bacteria 20999
292 Ga0495619_0077458 3300053085 Bacteria 2233
293 Ga0500583_0202022 3300053092 Bacteria 988

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025906 Ga0207699_10541985 Ga0207699_105419851 188
2 3300006051 Ga0075364_10113306 Ga0075364_101133062 191
3 3300050492 nmdc:mga0yw44_47132_c1 nmdc:mga0yw44_47132_c1_1671_2411 192
4 3300005577 Ga0068857_100624618 Ga0068857_1006246182 196
5 3300005435 Ga0070714_100209422 Ga0070714_1002094222 198
6 3300025929 Ga0207664_10031377 Ga0207664_100313774 198
7 3300048929 Ga0496126_0069660 Ga0496126_0069660_2077_2817 199
8 3300005340 Ga0070689_100119951 Ga0070689_1001199513 200
9 3300005618 Ga0068864_100234110 Ga0068864_1002341103 200
10 3300005843 Ga0068860_100016142 Ga0068860_1000161421 200
11 3300028381 Ga0268264_10019379 Ga0268264_100193791 200
12 3300006178 Ga0075367_10058659 Ga0075367_100586592 204
13 3300050494 nmdc:mga06z11_52412_c1 nmdc:mga06z11_52412_c1_1236_1976 204
14 3300031995 Ga0307409_100057092 Ga0307409_1000570923 206
15 3300025921 Ga0207652_10073153 Ga0207652_100731531 207
16 3300005548 Ga0070665_100404100 Ga0070665_1004041002 208
17 3300013105 Ga0157369_10063431 Ga0157369_100634314 208
18 3300033179 Ga0307507_10082959 Ga0307507_100829594 208
19 3300038443 Ga0395901_0015094 Ga0395901_0015094_2368_3102 208
20 3300037466 Ga0395898_0041042 Ga0395898_0041042_1474_2208 209
21 3300033545 Ga0316214_1000424 Ga0316214_10004242 210
22 3300033547 Ga0316212_1004019 Ga0316212_10040192 210
23 3300036459 Ga0372808_004321 Ga0372808_004321_865_1605 210
24 3300046477 Ga0495664_0088084 Ga0495664_0088084_911_1645 210
25 3300005564 Ga0070664_100609694 Ga0070664_1006096941 211
26 3300005327 Ga0070658_10039870 Ga0070658_100398702 212
27 3300005366 Ga0070659_100094355 Ga0070659_1000943553 212
28 3300005458 Ga0070681_10155077 Ga0070681_101550772 212
29 3300005535 Ga0070684_100110970 Ga0070684_1001109702 212
30 3300009093 Ga0105240_10666443 Ga0105240_106664432 212
31 3300009551 Ga0105238_10523297 Ga0105238_105232972 212
32 3300010375 Ga0105239_10196524 Ga0105239_101965242 212
33 3300013307 Ga0157372_10149757 Ga0157372_101497572 212
34 3300020082 Ga0206353_11522686 Ga0206353_115226862 212
35 3300025909 Ga0207705_10244616 Ga0207705_102446162 212
36 3300025912 Ga0207707_10464430 Ga0207707_104644302 212
37 3300025924 Ga0207694_10261026 Ga0207694_102610262 212
38 3300025928 Ga0207700_10250628 Ga0207700_102506281 212
39 3300025944 Ga0207661_10230012 Ga0207661_102300122 212
40 3300026078 Ga0207702_10280826 Ga0207702_102808262 212
41 3300026116 Ga0207674_10131409 Ga0207674_101314092 212
42 3300046462 Ga0495651_0000426 Ga0495651_0000426_7609_8349 212
43 3300046529 Ga0495652_0002116 Ga0495652_0002116_18818_19558 212
44 3300046809 Ga0495600_0019485 Ga0495600_0019485_3271_4011 212
45 3300048912 Ga0496109_0444305 Ga0496109_0444305_439_1161 212
46 3300048915 Ga0496112_0175746 Ga0496112_0175746_995_1717 212
47 3300031901 Ga0307406_10275512 Ga0307406_102755122 213
48 3300005329 Ga0070683_100000383 Ga0070683_1000003836 216
49 3300005344 Ga0070661_100175663 Ga0070661_1001756631 216
50 3300005458 Ga0070681_10300655 Ga0070681_103006552 216
51 3300005535 Ga0070684_100038383 Ga0070684_1000383834 216
52 3300025944 Ga0207661_10014879 Ga0207661_100148792 216
53 3300035692 Ga0373935_0110873 Ga0373935_0110873_963_1718 216
54 3300037068 Ga0373925_0145392 Ga0373925_0145392_535_1290 216
55 3300046459 Ga0495629_0001715 Ga0495629_0001715_12819_13574 216
56 3300046461 Ga0495641_0002868 Ga0495641_0002868_9013_9768 216
57 3300046499 Ga0495594_0053043 Ga0495594_0053043_785_1519 216
58 3300046514 Ga0495618_0014285 Ga0495618_0014285_1872_2627 216
59 3300046526 Ga0495666_0010557 Ga0495666_0010557_1422_2177 216
60 3300046533 Ga0495640_0028603 Ga0495640_0028603_2040_2795 216
61 3300046642 Ga0495634_0017649 Ga0495634_0017649_3233_3988 216
62 3300046674 Ga0495588_0055421 Ga0495588_0055421_926_1681 216
63 3300046689 Ga0495613_0040987 Ga0495613_0040987_211_966 216
64 3300047315 Ga0495581_0023778 Ga0495581_0023778_2635_3390 216
65 3300047319 Ga0495674_0046265 Ga0495674_0046265_936_1691 216
66 3300047321 Ga0495676_0099479 Ga0495676_0099479_95_850 216
67 3300047471 Ga0495684_0008502 Ga0495684_0008502_2110_2865 216
68 3300053077 Ga0495601_0019162 Ga0495601_0019162_1564_2319 216
69 3300006871 Ga0075434_100036713 Ga0075434_1000367132 217
70 3300007076 Ga0075435_100077418 Ga0075435_1000774183 217
71 3300037068 Ga0373925_0000009 Ga0373925_0000009_204127_204867 217
72 3300046642 Ga0495634_0026685 Ga0495634_0026685_1951_2682 217
73 3300046678 Ga0495599_0031296 Ga0495599_0031296_904_1635 217
74 3300047320 Ga0495672_0044231 Ga0495672_0044231_878_1612 217
75 3300050512 nmdc:mga0n895_55770_c1 nmdc:mga0n895_55770_c1_1056_1811 217
76 3300050513 nmdc:mga0rr50_26229_c1 nmdc:mga0rr50_26229_c1_2138_2893 217
77 3300050514 nmdc:mga08x19_80871_c1 nmdc:mga08x19_80871_c1_370_1125 217
78 3300050515 nmdc:mga0a205_99623_c1 nmdc:mga0a205_99623_c1_1843_2598 217
79 3300006847 Ga0075431_100244778 Ga0075431_1002447782 218
80 3300035111 Ga0373923_0062775 Ga0373923_0062775_709_1443 218
81 3300035113 Ga0373936_0012579 Ga0373936_0012579_1007_1741 218
82 3300035171 Ga0373946_0172650 Ga0373946_0172650_25_759 218
83 3300046517 Ga0495630_0026336 Ga0495630_0026336_1727_2461 218
84 3300046529 Ga0495652_0393086 Ga0495652_0393086_218_952 218
85 3300046536 Ga0495587_0045729 Ga0495587_0045729_600_1334 218
86 3300046543 Ga0495645_0122867 Ga0495645_0122867_432_1166 218
87 3300047321 Ga0495676_0191271 Ga0495676_0191271_496_1230 218
88 3300028794 Ga0307515_10036253 Ga0307515_100362533 219
89 3300031901 Ga0307406_10174428 Ga0307406_101744281 219
90 3300037418 Ga0395900_0163312 Ga0395900_0163312_843_1568 219
91 3300037466 Ga0395898_0055407 Ga0395898_0055407_1446_2171 219
92 3300038443 Ga0395901_0570708 Ga0395901_0570708_289_1014 219
93 3300003203 JGI25406J46586_10010526 JGI25406J46586_100105263 220
94 3300005985 Ga0081539_10002256 Ga0081539_100022564 220
95 3300005985 Ga0081539_10065399 Ga0081539_100653993 220
96 3300031507 Ga0307509_10014756 Ga0307509_100147569 221
97 3300037068 Ga0373925_0043391 Ga0373925_0043391_1371_2105 221
98 3300046454 Ga0495592_0031518 Ga0495592_0031518_1873_2607 221
99 3300047315 Ga0495581_0101970 Ga0495581_0101970_762_1496 221
100 3300035086 Ga0373934_0000007 Ga0373934_0000007_47900_48640 222
101 3300035111 Ga0373923_0022961 Ga0373923_0022961_911_1651 222
102 3300035117 Ga0373953_0000080 Ga0373953_0000080_8635_9375 222
103 3300035118 Ga0373954_0001900 Ga0373954_0001900_3480_4220 222
104 3300035119 Ga0373956_0000392 Ga0373956_0000392_14478_15218 222
105 3300035119 Ga0373956_0007139 Ga0373956_0007139_1671_2402 222
106 3300035120 Ga0373957_0004392 Ga0373957_0004392_1513_2253 222
107 3300035172 Ga0373955_0002167 Ga0373955_0002167_2292_3032 222
108 3300035410 Ga0373924_0001207 Ga0373924_0001207_4449_5189 222
109 3300035724 Ga0373933_0000021 Ga0373933_0000021_48338_49078 222
110 3300036401 Ga0373937_0000032 Ga0373937_0000032_47970_48710 222
111 3300046454 Ga0495592_0000143 Ga0495592_0000143_14511_15251 222
112 3300046461 Ga0495641_0011082 Ga0495641_0011082_3503_4234 222
113 3300046462 Ga0495651_0000010 Ga0495651_0000010_100044_100784 222
114 3300046463 Ga0495653_0000962 Ga0495653_0000962_18587_19327 222
115 3300046511 Ga0495608_0000037 Ga0495608_0000037_82642_83382 222
116 3300046516 Ga0495628_0000884 Ga0495628_0000884_25584_26324 222
117 3300046529 Ga0495652_0000135 Ga0495652_0000135_67477_68217 222
118 3300046536 Ga0495587_0000024 Ga0495587_0000024_47969_48709 222
119 3300046559 Ga0495667_0000024 Ga0495667_0000024_67528_68268 222
120 3300046663 Ga0495635_0103197 Ga0495635_0103197_1037_1777 222
121 3300046675 Ga0495657_0000057 Ga0495657_0000057_67505_68245 222
122 3300046678 Ga0495599_0000323 Ga0495599_0000323_17565_18305 222
123 3300046679 Ga0495623_0000947 Ga0495623_0000947_11439_12179 222
124 3300046809 Ga0495600_0015102 Ga0495600_0015102_3981_4721 222
125 3300047317 Ga0495604_0000024 Ga0495604_0000024_47786_48526 222
126 3300047322 Ga0495680_0000005 Ga0495680_0000005_100020_100760 222
127 3300047444 Ga0495675_0000495 Ga0495675_0000495_18588_19328 222
128 3300048088 Ga0495602_0001952 Ga0495602_0001952_12387_13127 222
129 3300053084 Ga0495595_0000260 Ga0495595_0000260_17365_18105 222
130 3300005434 Ga0070709_10239055 Ga0070709_102390552 223
131 3300005435 Ga0070714_100508455 Ga0070714_1005084552 223
132 3300005456 Ga0070678_100039669 Ga0070678_1000396693 223
133 3300005549 Ga0070704_100157782 Ga0070704_1001577822 223
134 3300025915 Ga0207693_10029021 Ga0207693_100290215 223
135 3300025916 Ga0207663_10020623 Ga0207663_100206233 223
136 3300025929 Ga0207664_10036341 Ga0207664_100363414 223
137 3300025939 Ga0207665_10013763 Ga0207665_100137635 223
138 3300026116 Ga0207674_10622519 Ga0207674_106225191 223
139 3300026121 Ga0207683_10099494 Ga0207683_100994943 223
140 3300035086 Ga0373934_0004557 Ga0373934_0004557_2179_2913 223
141 3300035090 Ga0373949_0009021 Ga0373949_0009021_329_1063 223
142 3300035091 Ga0373951_0031967 Ga0373951_0031967_30_764 223
143 3300035092 Ga0373952_0016611 Ga0373952_0016611_325_1059 223
144 3300035112 Ga0373932_0003677 Ga0373932_0003677_2542_3276 223
145 3300035114 Ga0373939_0012604 Ga0373939_0012604_558_1292 223
146 3300035115 Ga0373941_0010658 Ga0373941_0010658_1099_1833 223
147 3300035117 Ga0373953_0079152 Ga0373953_0079152_419_1153 223
148 3300035118 Ga0373954_0043500 Ga0373954_0043500_159_893 223
149 3300035172 Ga0373955_0076605 Ga0373955_0076605_835_1569 223
150 3300035207 Ga0373942_0010157 Ga0373942_0010157_1024_1758 223
151 3300035410 Ga0373924_0000775 Ga0373924_0000775_25_759 223
152 3300035692 Ga0373935_0279787 Ga0373935_0279787_341_1075 223
153 3300046459 Ga0495629_0014789 Ga0495629_0014789_3262_3996 223
154 3300046462 Ga0495651_0033588 Ga0495651_0033588_1567_2301 223
155 3300046511 Ga0495608_0088022 Ga0495608_0088022_414_1148 223
156 3300046516 Ga0495628_0094262 Ga0495628_0094262_876_1610 223
157 3300046531 Ga0495665_0117292 Ga0495665_0117292_577_1311 223
158 3300046559 Ga0495667_0013985 Ga0495667_0013985_2459_3193 223
159 3300046679 Ga0495623_0036493 Ga0495623_0036493_1708_2442 223
160 3300046680 Ga0495646_0025405 Ga0495646_0025405_205_939 223
161 3300046689 Ga0495613_0039845 Ga0495613_0039845_245_979 223
162 3300046690 Ga0495624_0087457 Ga0495624_0087457_983_1717 223
163 3300046809 Ga0495600_0008997 Ga0495600_0008997_3655_4389 223
164 3300047317 Ga0495604_0219757 Ga0495604_0219757_228_962 223
165 3300047322 Ga0495680_0020804 Ga0495680_0020804_1574_2308 223
166 3300047444 Ga0495675_0034599 Ga0495675_0034599_1004_1738 223
167 3300048088 Ga0495602_0048275 Ga0495602_0048275_228_962 223
168 3300048904 Ga0496101_0180494 Ga0496101_0180494_851_1585 223
169 3300048909 Ga0496106_0014936 Ga0496106_0014936_1860_2594 223
170 3300048911 Ga0496108_0473315 Ga0496108_0473315_46_780 223
171 3300048914 Ga0496111_0178630 Ga0496111_0178630_50_784 223
172 3300053078 Ga0495612_0018138 Ga0495612_0018138_741_1475 223
173 3300053085 Ga0495619_0077458 Ga0495619_0077458_212_946 223
174 3300005337 Ga0070682_100100588 Ga0070682_1001005882 224
175 3300005434 Ga0070709_10746516 Ga0070709_107465161 224
176 3300005436 Ga0070713_100260964 Ga0070713_1002609641 224
177 3300005440 Ga0070705_100022170 Ga0070705_1000221704 224
178 3300005543 Ga0070672_100581563 Ga0070672_1005815632 224
179 3300005614 Ga0068856_100040123 Ga0068856_1000401233 224
180 3300005615 Ga0070702_100046979 Ga0070702_1000469793 224
181 3300005844 Ga0068862_100598260 Ga0068862_1005982601 224
182 3300006358 Ga0068871_100106559 Ga0068871_1001065593 224
183 3300009101 Ga0105247_10181855 Ga0105247_101818552 224
184 3300025906 Ga0207699_10007397 Ga0207699_100073975 224
185 3300031995 Ga0307409_100527329 Ga0307409_1005273292 224
186 3300032126 Ga0307415_100409314 Ga0307415_1004093142 224
187 3300034816 Ga0373930_0009393 Ga0373930_0009393_476_1210 224
188 3300034957 Ga0373938_0018276 Ga0373938_0018276_441_1175 224
189 3300035088 Ga0373940_0007436 Ga0373940_0007436_476_1210 224
190 3300035121 Ga0373960_0005242 Ga0373960_0005242_1942_2676 224
191 3300035242 Ga0373962_0017237 Ga0373962_0017237_38_772 224
192 3300035691 Ga0373931_0016936 Ga0373931_0016936_2647_3381 224
193 3300037312 Ga0395899_0011083 Ga0395899_0011083_4740_5474 224
194 3300037466 Ga0395898_0258894 Ga0395898_0258894_447_1181 224
195 3300048907 Ga0496104_0232223 Ga0496104_0232223_586_1320 224
196 3300048915 Ga0496112_0156297 Ga0496112_0156297_883_1617 224
197 3300050492 nmdc:mga0yw44_176871_c1 nmdc:mga0yw44_176871_c1_296_1030 225
198 3300046473 Ga0495582_0374916 Ga0495582_0374916_46_777 226
199 3300031456 Ga0307513_10418932 Ga0307513_104189321 227
200 3300053092 Ga0500583_0202022 Ga0500583_0202022_236_964 227
201 3300031456 Ga0307513_10100544 Ga0307513_101005442 228
202 3300031665 Ga0316575_10000058 Ga0316575_100000587 228
203 3300035091 Ga0373951_0000264 Ga0373951_0000264_7351_8076 228
204 iso_pu_bacteria 2956939328 2956939741 229
205 iso_pu_bacteria 3001119090 3001119725 229
206 3300005329 Ga0070683_100666532 Ga0070683_1006665322 230
207 3300005985 Ga0081539_10067123 Ga0081539_100671232 230
208 3300020070 Ga0206356_11327158 Ga0206356_113271582 230
209 3300031730 Ga0307516_10133879 Ga0307516_101338793 232
210 iso_pu_bacteria 2751185782 2753269890 233
211 3300006846 Ga0075430_100100955 Ga0075430_1001009553 234
212 3300005844 Ga0068862_100226067 Ga0068862_1002260672 236
213 3300026116 Ga0207674_10182176 Ga0207674_101821763 236
214 3300028380 Ga0268265_10192204 Ga0268265_101922042 236
215 3300031616 Ga0307508_10001576 Ga0307508_100015769 236
216 3300003323 rootH1_10090400 rootH1_100904004 237
217 3300005347 Ga0070668_100215504 Ga0070668_1002155041 237
218 3300005367 Ga0070667_100054026 Ga0070667_1000540262 237
219 3300005617 Ga0068859_100181456 Ga0068859_1001814562 237
220 3300005842 Ga0068858_100023035 Ga0068858_1000230354 237
221 3300005843 Ga0068860_100008678 Ga0068860_1000086785 237
222 3300006931 Ga0097620_100181459 Ga0097620_1001814592 237
223 3300014968 Ga0157379_10119993 Ga0157379_101199932 237
224 3300025942 Ga0207689_10254960 Ga0207689_102549602 237
225 3300025986 Ga0207658_10046088 Ga0207658_100460883 237
226 3300026035 Ga0207703_10023665 Ga0207703_100236652 237
227 3300026095 Ga0207676_10302122 Ga0207676_103021222 237
228 3300048915 Ga0496112_0236870 Ga0496112_0236870_317_1039 237
229 3300003316 rootH1_10175192 rootH1_101751921 238
230 3300003323 rootH1_10208635 rootH1_102086352 238
231 3300005434 Ga0070709_10084339 Ga0070709_100843392 238
232 3300005535 Ga0070684_100190336 Ga0070684_1001903362 238
233 3300005564 Ga0070664_100161506 Ga0070664_1001615062 238
234 3300005577 Ga0068857_100049426 Ga0068857_1000494263 238
235 3300005614 Ga0068856_100329542 Ga0068856_1003295422 238
236 3300005841 Ga0068863_100113630 Ga0068863_1001136303 238
237 3300006237 Ga0097621_100717744 Ga0097621_1007177442 238
238 3300009177 Ga0105248_10087433 Ga0105248_100874333 238
239 3300014325 Ga0163163_10013192 Ga0163163_100131928 238
240 3300014968 Ga0157379_10037724 Ga0157379_100377243 238
241 3300025906 Ga0207699_10023499 Ga0207699_100234993 238
242 3300025941 Ga0207711_10147119 Ga0207711_101471193 238
243 3300025945 Ga0207679_10087305 Ga0207679_100873052 238
244 3300025961 Ga0207712_10628100 Ga0207712_106281002 238
245 3300026095 Ga0207676_10324062 Ga0207676_103240622 238
246 3300026116 Ga0207674_10058720 Ga0207674_100587203 238
247 3300031730 Ga0307516_10017406 Ga0307516_100174062 238
248 3300032126 Ga0307415_100236817 Ga0307415_1002368172 238
249 3300046475 Ga0495639_0107478 Ga0495639_0107478_500_1225 238
250 3300048907 Ga0496104_0065719 Ga0496104_0065719_911_1636 238
251 3300048911 Ga0496108_0166783 Ga0496108_0166783_838_1563 238
252 3300048912 Ga0496109_0012395 Ga0496109_0012395_5088_5813 238
253 3300048913 Ga0496110_0038844 Ga0496110_0038844_2608_3333 238
254 3300048914 Ga0496111_0377496 Ga0496111_0377496_275_1000 238
255 3300005338 Ga0068868_100568268 Ga0068868_1005682682 239
256 3300028786 Ga0307517_10048118 Ga0307517_100481186 239
257 3300028794 Ga0307515_10029029 Ga0307515_100290295 239
258 3300030522 Ga0307512_10003179 Ga0307512_100031799 239
259 3300030522 Ga0307512_10006053 Ga0307512_100060535 239
260 3300031456 Ga0307513_10024797 Ga0307513_100247973 239
261 3300031507 Ga0307509_10211211 Ga0307509_102112112 239
262 3300031507 Ga0307509_10244544 Ga0307509_102445442 239
263 3300031616 Ga0307508_10017580 Ga0307508_100175806 239
264 3300031730 Ga0307516_10019219 Ga0307516_100192197 239
265 3300031731 Ga0307405_10112535 Ga0307405_101125352 239
266 3300031731 Ga0307405_10405253 Ga0307405_104052532 239
267 3300031901 Ga0307406_10150801 Ga0307406_101508012 239
268 3300031901 Ga0307406_10557984 Ga0307406_105579842 239
269 3300031911 Ga0307412_10711536 Ga0307412_107115361 239
270 3300031995 Ga0307409_100138321 Ga0307409_1001383211 239
271 3300032002 Ga0307416_100110122 Ga0307416_1001101222 239
272 3300032126 Ga0307415_100249860 Ga0307415_1002498602 239
273 3300037471 Ga0395905_0354659 Ga0395905_0354659_141_866 239
274 3300005367 Ga0070667_100011729 Ga0070667_1000117293 240
275 3300005467 Ga0070706_100103413 Ga0070706_1001034133 240
276 3300005467 Ga0070706_100442182 Ga0070706_1004421822 240
277 3300005535 Ga0070684_100525291 Ga0070684_1005252912 240
278 3300006844 Ga0075428_100008590 Ga0075428_10000859012 240
279 3300006847 Ga0075431_100030957 Ga0075431_1000309574 240
280 3300006880 Ga0075429_100010364 Ga0075429_1000103644 240
281 3300009147 Ga0114129_10060073 Ga0114129_100600737 240
282 3300025910 Ga0207684_10057555 Ga0207684_100575552 240
283 3300025945 Ga0207679_10145591 Ga0207679_101455912 240
284 3300031616 Ga0307508_10162913 Ga0307508_101629132 240
285 3300050507 nmdc:mga05p37_64200_c1 nmdc:mga05p37_64200_c1_2355_3086 240
286 3300050508 nmdc:mga09592_40596_c1 nmdc:mga09592_40596_c1_1987_2718 240
287 3300050510 nmdc:mga06r32_26974_c1 nmdc:mga06r32_26974_c1_2627_3358 240
288 3300003203 JGI25406J46586_10001274 JGI25406J46586_100012748 241
289 3300005985 Ga0081539_10000186 Ga0081539_1000018672 241
290 3300031548 Ga0307408_100281539 Ga0307408_1002815392 241
291 3300031731 Ga0307405_10015084 Ga0307405_100150843 241
292 3300031901 Ga0307406_10003716 Ga0307406_100037165 241
293 3300031911 Ga0307412_10014825 Ga0307412_100148251 241
294 3300031995 Ga0307409_100000110 Ga0307409_10000011025 241
295 3300032002 Ga0307416_100021242 Ga0307416_1000212423 241
296 3300032126 Ga0307415_100000012 Ga0307415_10000001217 241

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

10

197

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.7262 2 238
7o12-assembly1.cif.gz_E abc transporter nosdfy, amppnp-bound in gdn 0.7234 2 238
7qba-assembly1.cif.gz_E cryoem structure of the abc transporter nosdfy complexed with nitrous oxide reductase nosz 0.7233 2 238
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.7176 2 238
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.7138 2 238
ID Description Score Start End Superfamily
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6686 45 233 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6571 47 237 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6221 45 233 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5395 47 237 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5384 45 233 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A810LQ46-F1-model_v4 deleted 0.9646 3 241
AF-A0A6L5FWQ8-F1-model_v4 ABC transporter permease 0.9571 2 239 GO:0016020
AF-A0A810LQ46-F1-model_v4 deleted 0.9567 3 241
AF-A0A1M3EK13-F1-model_v4 ABC transporter permease 0.9544 2 241 GO:0016020
AF-A0A7W0HAE0-F1-model_v4 ABC transporter permease subunit 0.9509 2 241 GO:0016020

Feature Viewer

pLDDT pTM Quality
91.35 0.89 High
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Predicted Structure (AlphaFold2)

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Map