F392548

General Info

Members Datasets Scaffolds Average Seq Length
295 166 590 561

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100003686|Ga0068853_1000036868
Length 572
Sequence MNRTGLWIRTGVIVAIFLIGVYLVFGPRHTPTGADFTWTGIKNNLASNINLGLDLKGGSHLVMRVKTEEYLKRLTENNEAAAVQAVKEAKDDAGNPLGVNAEGAAVTDNGNYTVTLTISDPSKAQVVVDAVKKKVDFANWTQSTSGNQVVWNLPKQQQAILKSAARDQAYKIIESRINAFGVKEPLLQLQGSSDSGLILLQMPGLSDPERVKDLIGKESRLELMKIVSPPNPQPVQTYPSEQAALATIGGKNTDTRKVLPYTERDDTTPSINGNTNTAQNQKPTKWVVVETPAVVDGSELRDASATQGRAGGSDYQITFSFKPTGAQKFGDWTGKNIGNYMAVVLNDEVKSAAFIKSQIFDSGEISGKFTKQAADDLALTLKSGALPAAIEYQEERTVGPSLGADSIRAGVEASVGGLVLVVLFMLFYYRGSGINAVVALTLNMLLTIAALVMIGSTLTLPGIAGIILGIGMAVDSNVLIFERIREELRLGYSVPESIGLGFDRAFVTIIDTHVTTIISSVILYMTGSSSIKGFAVTLILGLLINLFTAVFVSRTIFNWELSLYPNRERMSI

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
54 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
59 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
73 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
76 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
77 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
86 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
91 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
92 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
93 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
132 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
135 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
136 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
137 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
138 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
139 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
140 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
141 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
142 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
143 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
144 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
147 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
148 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
149 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
150 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 1.69
Rhizosphere 97.63
Stem 0
Stem Tuber 0
Unclassified 5.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100003686 3300005539 Bacteria 11752
2 LJQas_1000046 3300000549 Bacteria 19569
3 JGI24748J21848_1000002 3300002074 Bacteria 426946
4 JGI24034J26672_10000004 3300002239 Bacteria 426946
5 JGI24751J29686_10000194 3300002459 Bacteria 26741
6 Ga0065714_10002422 3300005288 Bacteria 18332
7 Ga0065712_10067912 3300005290 Bacteria 21528
8 Ga0065715_10097305 3300005293 Bacteria 3726
9 Ga0065715_10103823 3300005293 Bacteria 3006
10 Ga0065707_10001528 3300005295 Bacteria 6694
11 Ga0065707_10014800 3300005295 Unclassified 2188
12 Ga0070658_10003151 3300005327 Bacteria 13607
13 Ga0070676_10025248 3300005328 Bacteria 3356
14 Ga0070676_10032939 3300005328 Bacteria 2971
15 Ga0070690_100000977 3300005330 Bacteria 14547
16 Ga0070690_100009987 3300005330 Bacteria 5510
17 Ga0070690_100067171 3300005330 Bacteria 2323
18 Ga0070670_100000177 3300005331 Bacteria 57701
19 Ga0070670_100030615 3300005331 Bacteria 4633
20 Ga0070670_100042801 3300005331 Unclassified 3894
21 Ga0070670_100091659 3300005331 Bacteria 2613
22 Ga0068869_100042013 3300005334 Bacteria 3276
23 Ga0068869_100042725 3300005334 Bacteria 3251
24 Ga0068869_100054821 3300005334 Bacteria 2904
25 Ga0068869_100074305 3300005334 Bacteria 2522
26 Ga0070666_10025603 3300005335 Bacteria 3848
27 Ga0070680_100000838 3300005336 Bacteria 21751
28 Ga0070680_100021769 3300005336 Bacteria 5099
29 Ga0070682_100000220 3300005337 Bacteria 41736
30 Ga0070660_100013795 3300005339 Bacteria 5813
31 Ga0070660_100129213 3300005339 Bacteria 2020
32 Ga0070689_100008940 3300005340 Bacteria 7087
33 Ga0070687_100030808 3300005343 Unclassified 2625
34 Ga0070692_10031235 3300005345 Bacteria 2669
35 Ga0070669_100001503 3300005353 Bacteria 16858
36 Ga0070669_100009956 3300005353 Bacteria 6762
37 Ga0070671_100011794 3300005355 Bacteria 7031
38 Ga0070671_100060762 3300005355 Bacteria 3146
39 Ga0070673_100093441 3300005364 Bacteria 2463
40 Ga0070688_100031667 3300005365 Bacteria 3183
41 Ga0070659_100002653 3300005366 Bacteria 12737
42 Ga0070659_100007191 3300005366 Bacteria 8077
43 Ga0070667_100045221 3300005367 Bacteria 3701
44 Ga0070703_10000384 3300005406 Bacteria 18716
45 Ga0070705_100016781 3300005440 Bacteria 3811
46 Ga0070694_100001689 3300005444 Bacteria 12988
47 Ga0070694_100064778 3300005444 Bacteria 2502
48 Ga0070708_100034616 3300005445 Bacteria 4396
49 Ga0070663_100024814 3300005455 Unclassified 4040
50 Ga0070681_10000210 3300005458 Bacteria 45431
51 Ga0070681_10006977 3300005458 Bacteria 10992
52 Ga0070681_10026223 3300005458 Bacteria 5858
53 Ga0070681_10037736 3300005458 Bacteria 4846
54 Ga0070681_10077411 3300005458 Bacteria 3284
55 Ga0070706_100000223 3300005467 Bacteria 69475
56 Ga0070706_100027688 3300005467 Bacteria 5214
57 Ga0070707_100000087 3300005468 Bacteria 82786
58 Ga0070707_100007935 3300005468 Bacteria 9856
59 Ga0070707_100122875 3300005468 Bacteria 2521
60 Ga0070698_100000245 3300005471 Bacteria 54182
61 Ga0070698_100007556 3300005471 Bacteria 11756
62 Ga0070698_100012872 3300005471 Bacteria 8860
63 Ga0070698_100055058 3300005471 Bacteria 4036
64 Ga0070698_100152784 3300005471 Bacteria 2255
65 Ga0070699_100022907 3300005518 Bacteria 5381
66 Ga0070699_100062774 3300005518 Unclassified 3220
67 Ga0070699_100149721 3300005518 Bacteria 2063
68 Ga0070679_100000055 3300005530 Bacteria 84504
69 Ga0070679_100011367 3300005530 Bacteria 8481
70 Ga0070697_100000754 3300005536 Bacteria 24161
71 Ga0070697_100002695 3300005536 Bacteria 13676
72 Ga0070697_100017895 3300005536 Bacteria 5582
73 Ga0070686_100005461 3300005544 Bacteria 7038
74 Ga0070686_100012871 3300005544 Bacteria 4775
75 Ga0070695_100032914 3300005545 Bacteria 3242
76 Ga0070695_100037021 3300005545 Bacteria 3073
77 Ga0070695_100069634 3300005545 Bacteria 2300
78 Ga0070696_100028056 3300005546 Unclassified 3839
79 Ga0070696_100038980 3300005546 Bacteria 3281
80 Ga0070696_100070538 3300005546 Bacteria 2458
81 Ga0070704_100000813 3300005549 Bacteria 15489
82 Ga0068855_100013564 3300005563 Bacteria 9828
83 Ga0070664_100002394 3300005564 Bacteria 15063
84 Ga0070664_100015510 3300005564 Bacteria 6234
85 Ga0070664_100072657 3300005564 Unclassified 2951
86 Ga0068857_100006124 3300005577 Bacteria 10278
87 Ga0068857_100058762 3300005577 Bacteria 3415
88 Ga0068854_100088115 3300005578 Bacteria 2304
89 Ga0068856_100007846 3300005614 Bacteria 10424
90 Ga0070702_100027454 3300005615 Bacteria 3072
91 Ga0070702_100033973 3300005615 Bacteria 2808
92 Ga0068852_100047271 3300005616 Unclassified 3671
93 Ga0068859_100021094 3300005617 Bacteria 6537
94 Ga0068859_100028242 3300005617 Bacteria 5624
95 Ga0068864_100010968 3300005618 Bacteria 7492
96 Ga0068864_100027030 3300005618 Bacteria 4841
97 Ga0068866_10004500 3300005718 Bacteria 5714
98 Ga0068851_10045186 3300005834 Bacteria 2225
99 Ga0068858_100000770 3300005842 Bacteria 33479
100 Ga0068858_100066645 3300005842 Bacteria 3334
101 Ga0068858_100076339 3300005842 Bacteria 3112
102 Ga0068858_100145446 3300005842 Bacteria 2226
103 Ga0068858_100199586 3300005842 Bacteria 1891
104 Ga0068860_100007345 3300005843 Bacteria 11015
105 Ga0068860_100009533 3300005843 Bacteria 9644
106 Ga0068860_100071528 3300005843 Bacteria 3296
107 Ga0068862_100006663 3300005844 Bacteria 9580
108 Ga0068862_100096913 3300005844 Bacteria 2575
109 Ga0081540_1044601 3300005983 Bacteria 2261
110 Ga0070716_100000016 3300006173 Bacteria 91387
111 Ga0097621_100026747 3300006237 Bacteria 4530
112 Ga0068871_100027966 3300006358 Bacteria 4416
113 Ga0075430_100083969 3300006846 Bacteria 2668
114 Ga0075431_100004609 3300006847 Bacteria 13536
115 Ga0075433_10020250 3300006852 Bacteria 5559
116 Ga0075433_10034920 3300006852 Bacteria 4321
117 Ga0075433_10050114 3300006852 Bacteria 3634
118 Ga0075434_100051344 3300006871 Bacteria 4098
119 Ga0075429_100013349 3300006880 Bacteria 7122
120 Ga0075436_100000009 3300006914 Bacteria 256132
121 Ga0097620_100021092 3300006931 Bacteria 6537
122 Ga0097620_100028241 3300006931 Bacteria 5624
123 Ga0075435_100000474 3300007076 Bacteria 24396
124 Ga0075435_100053940 3300007076 Bacteria 3243
125 Ga0105240_10083490 3300009093 Bacteria 3919
126 Ga0111539_10008874 3300009094 Bacteria 12731
127 Ga0105247_10000005 3300009101 Bacteria 426989
128 Ga0105247_10003372 3300009101 Bacteria 10452
129 Ga0105247_10012030 3300009101 Bacteria 5197
130 Ga0105247_10087953 3300009101 Bacteria 1968
131 Ga0114129_10003875 3300009147 Bacteria 21099
132 Ga0114129_10010589 3300009147 Bacteria 13148
133 Ga0114129_10014909 3300009147 Bacteria 11072
134 Ga0114129_10035238 3300009147 Bacteria 7071
135 Ga0114129_10065243 3300009147 Bacteria 5082
136 Ga0114129_10188069 3300009147 Bacteria 2806
137 Ga0105243_10000069 3300009148 Bacteria 121944
138 Ga0105243_10001117 3300009148 Bacteria 24373
139 Ga0105243_10052179 3300009148 Bacteria 3238
140 Ga0105241_10059615 3300009174 Bacteria 2935
141 Ga0105241_10140870 3300009174 Bacteria 1963
142 Ga0105242_10000023 3300009176 Bacteria 111152
143 Ga0105242_10000507 3300009176 Bacteria 30734
144 Ga0105242_10002021 3300009176 Bacteria 15959
145 Ga0105242_10012210 3300009176 Bacteria 6611
146 Ga0105248_10011147 3300009177 Bacteria 9921
147 Ga0105248_10192332 3300009177 Bacteria 2299
148 Ga0105237_10035502 3300009545 Bacteria 5045
149 Ga0105238_10003824 3300009551 Bacteria 14956
150 Ga0105249_10017976 3300009553 Bacteria 6284
151 Ga0105249_10024306 3300009553 Bacteria 5444
152 Ga0105239_10045593 3300010375 Bacteria 4805
153 Ga0105246_10029376 3300011119 Bacteria 3620
154 Ga0157371_10100516 3300013102 Bacteria 2051
155 Ga0157369_10150563 3300013105 Bacteria 2459
156 Ga0157374_10018289 3300013296 Bacteria 6183
157 Ga0157374_10038586 3300013296 Bacteria 4391
158 Ga0157378_10000067 3300013297 Bacteria 92867
159 Ga0157378_10010493 3300013297 Bacteria 8092
160 Ga0157378_10017684 3300013297 Bacteria 6259
161 Ga0157378_10049200 3300013297 Bacteria 3750
162 Ga0157378_10101592 3300013297 Bacteria 2626
163 Ga0163162_10001341 3300013306 Bacteria 22917
164 Ga0163162_10024074 3300013306 Bacteria 6009
165 Ga0163162_10070396 3300013306 Bacteria 3549
166 Ga0157372_10005151 3300013307 Bacteria 13898
167 Ga0157372_10041848 3300013307 Bacteria 5066
168 Ga0157372_10046401 3300013307 Bacteria 4823
169 Ga0157372_10189783 3300013307 Bacteria 2380
170 Ga0157372_10248665 3300013307 Bacteria 2064
171 Ga0157375_10040424 3300013308 Bacteria 4495
172 Ga0157375_10042532 3300013308 Bacteria 4398
173 Ga0157375_10100583 3300013308 Bacteria 2972
174 Ga0163163_10001634 3300014325 Bacteria 18862
175 Ga0163163_10008639 3300014325 Bacteria 9061
176 Ga0163163_10014520 3300014325 Bacteria 7244
177 Ga0163163_10066754 3300014325 Bacteria 3574
178 Ga0163163_10118310 3300014325 Bacteria 2682
179 Ga0157380_10003766 3300014326 Bacteria 10425
180 Ga0157380_10016941 3300014326 Bacteria 5383
181 Ga0157379_10092110 3300014968 Bacteria 2719
182 Ga0207672_1000178 3300025223 Bacteria 8856
183 Ga0207653_10000014 3300025885 Bacteria 152002
184 Ga0207642_10012796 3300025899 Bacteria 3040
185 Ga0207710_10000004 3300025900 Bacteria 846540
186 Ga0207710_10002224 3300025900 Bacteria 9125
187 Ga0207710_10007959 3300025900 Bacteria 4481
188 Ga0207647_10016561 3300025904 Bacteria 5028
189 Ga0207643_10032739 3300025908 Bacteria 2905
190 Ga0207643_10053701 3300025908 Bacteria 2289
191 Ga0207705_10007741 3300025909 Bacteria 7895
192 Ga0207684_10000312 3300025910 Bacteria 68977
193 Ga0207684_10014931 3300025910 Bacteria 6685
194 Ga0207684_10017514 3300025910 Bacteria 6144
195 Ga0207707_10000003 3300025912 Bacteria 642592
196 Ga0207707_10033098 3300025912 Bacteria 4523
197 Ga0207695_10028410 3300025913 Bacteria 6203
198 Ga0207660_10001940 3300025917 Bacteria 13810
199 Ga0207657_10012722 3300025919 Bacteria 8288
200 Ga0207657_10012763 3300025919 Bacteria 8274
201 Ga0207652_10000111 3300025921 Bacteria 88571
202 Ga0207652_10031254 3300025921 Bacteria 4471
203 Ga0207646_10001821 3300025922 Bacteria 25747
204 Ga0207646_10005658 3300025922 Bacteria 13114
205 Ga0207681_10000963 3300025923 Bacteria 18793
206 Ga0207681_10057782 3300025923 Bacteria 2653
207 Ga0207694_10016069 3300025924 Bacteria 5647
208 Ga0207650_10000103 3300025925 Bacteria 111316
209 Ga0207650_10001428 3300025925 Bacteria 17223
210 Ga0207644_10001123 3300025931 Bacteria 17147
211 Ga0207644_10015757 3300025931 Bacteria 5080
212 Ga0207706_10019912 3300025933 Bacteria 6032
213 Ga0207686_10000025 3300025934 Bacteria 169534
214 Ga0207686_10000229 3300025934 Bacteria 42633
215 Ga0207686_10043839 3300025934 Bacteria 2743
216 Ga0207709_10000024 3300025935 Bacteria 369177
217 Ga0207709_10001998 3300025935 Bacteria 13243
218 Ga0207670_10012919 3300025936 Unclassified 4905
219 Ga0207665_10000013 3300025939 Bacteria 140039
220 Ga0207665_10101276 3300025939 Bacteria 2011
221 Ga0207691_10043606 3300025940 Unclassified 4133
222 Ga0207689_10009205 3300025942 Bacteria 8542
223 Ga0207689_10045953 3300025942 Bacteria 3610
224 Ga0207689_10102363 3300025942 Bacteria 2353
225 Ga0207679_10031524 3300025945 Bacteria 3711
226 Ga0207712_10010267 3300025961 Bacteria 5941
227 Ga0207712_10029933 3300025961 Bacteria 3657
228 Ga0207677_10098841 3300026023 Bacteria 2142
229 Ga0207703_10000589 3300026035 Bacteria 36985
230 Ga0207703_10086412 3300026035 Bacteria 2627
231 Ga0207703_10119162 3300026035 Bacteria 2263
232 Ga0207639_10006642 3300026041 Bacteria 7866
233 Ga0207639_10010435 3300026041 Bacteria 6435
234 Ga0207678_10062726 3300026067 Unclassified 3194
235 Ga0207708_10039430 3300026075 Bacteria 3599
236 Ga0207641_10043828 3300026088 Bacteria 3760
237 Ga0207648_10075673 3300026089 Bacteria 2934
238 Ga0207676_10053387 3300026095 Bacteria 3163
239 Ga0207674_10002848 3300026116 Bacteria 21514
240 Ga0207674_10037523 3300026116 Bacteria 5038
241 Ga0207674_10195843 3300026116 Bacteria 1970
242 Ga0207675_100002974 3300026118 Bacteria 16670
243 Ga0207698_10046341 3300026142 Bacteria 3282
244 Ga0207698_10057466 3300026142 Unclassified 3010
245 Ga0207698_10126838 3300026142 Bacteria 2172
246 Ga0207428_10003368 3300027907 Bacteria 15535
247 Ga0268265_10117855 3300028380 Bacteria 2182
248 Ga0268265_10145321 3300028380 Bacteria 1992
249 Ga0268264_10017031 3300028381 Bacteria 5950
250 Ga0307408_100005975 3300031548 Bacteria 8106
251 Ga0307405_10003798 3300031731 Bacteria 7019
252 Ga0307405_10015469 3300031731 Bacteria 4134
253 Ga0307413_10000854 3300031824 Bacteria 10726
254 Ga0307413_10001401 3300031824 Bacteria 9100
255 Ga0307410_10000567 3300031852 Bacteria 15190
256 Ga0307410_10008026 3300031852 Bacteria 5824
257 Ga0307406_10008130 3300031901 Bacteria 5844
258 Ga0307406_10067754 3300031901 Bacteria 2328
259 Ga0307407_10000383 3300031903 Bacteria 13344
260 Ga0307412_10012813 3300031911 Bacteria 4896
261 Ga0307409_100000882 3300031995 Bacteria 13881
262 Ga0307416_100018545 3300032002 Bacteria 4906
263 Ga0307411_10022628 3300032005 Bacteria 3705
264 Ga0307415_100000794 3300032126 Bacteria 14334
265 Ga0307415_100025883 3300032126 Bacteria 3691
266 Ga0307415_100110811 3300032126 Bacteria 2036
267 Ga0395905_0029578 3300037471 Bacteria 5162
268 Ga0451849_0295924 3300041505 Bacteria 1796
269 Ga0439434_0018422 3300042435 Unclassified 2090
270 Ga0453684_0074096 3300044712 Bacteria 4289
271 Ga0495598_0000005 3300046537 Bacteria 34265
272 Ga0495598_0008030 3300046537 Bacteria 2445
273 Ga0495621_0000515 3300046539 Bacteria 9587
274 Ga0495668_0000708 3300046616 Bacteria 40231
275 Ga0495674_0036961 3300047319 Bacteria 4390
276 Ga0495672_0088144 3300047320 Bacteria 1711
277 Ga0496102_0027588 3300048905 Bacteria 5070
278 Ga0496106_0173833 3300048909 Bacteria 1708
279 Ga0496109_0055325 3300048912 Bacteria 3620
280 Ga0496114_0025100 3300048917 Unclassified 4869
281 Ga0496114_0056084 3300048917 Bacteria 3287
282 Ga0501072_0045327 3300049588 Bacteria 3457
283 nmdc:mga05p37_4997_c1 3300050507 Bacteria 15541
284 nmdc:mga0qj67_166703_c1 3300050509 Bacteria 1788
285 nmdc:mga08y16_104614_c1 3300050511 Bacteria 2947
286 nmdc:mga0n895_203862_c1 3300050512 Bacteria 2008
287 nmdc:mga0n895_52856_c1 3300050512 Bacteria 3989
288 nmdc:mga0rr50_124481_c1 3300050513 Unclassified 2056
289 nmdc:mga0rr50_344_c1 3300050513 Bacteria 25343
290 nmdc:mga08x19_31_c1 3300050514 Bacteria 209591
291 nmdc:mga0a205_18164_c1 3300050515 Bacteria 6607
292 nmdc:mga0a205_34121_c1 3300050515 Bacteria 4882
293 nmdc:mga0a205_48419_c1 3300050515 Bacteria 4102
294 nmdc:mga0a205_70020_c1 3300050515 Bacteria 3387
295 Ga0500577_0003652 3300053142 Bacteria 4009
296 Ga0068853_100003686
297 LJQas_1000046
298 JGI24748J21848_1000002
299 JGI24034J26672_10000004
300 JGI24751J29686_10000194
301 Ga0065714_10002422
302 Ga0065712_10067912
303 Ga0065715_10097305
304 Ga0065715_10103823
305 Ga0065707_10001528
306 Ga0065707_10014800
307 Ga0070658_10003151
308 Ga0070676_10025248
309 Ga0070676_10032939
310 Ga0070690_100000977
311 Ga0070690_100009987
312 Ga0070690_100067171
313 Ga0070670_100000177
314 Ga0070670_100030615
315 Ga0070670_100042801
316 Ga0070670_100091659
317 Ga0068869_100042013
318 Ga0068869_100042725
319 Ga0068869_100054821
320 Ga0068869_100074305
321 Ga0070666_10025603
322 Ga0070680_100000838
323 Ga0070680_100021769
324 Ga0070682_100000220
325 Ga0070660_100013795
326 Ga0070660_100129213
327 Ga0070689_100008940
328 Ga0070687_100030808
329 Ga0070692_10031235
330 Ga0070669_100001503
331 Ga0070669_100009956
332 Ga0070671_100011794
333 Ga0070671_100060762
334 Ga0070673_100093441
335 Ga0070688_100031667
336 Ga0070659_100002653
337 Ga0070659_100007191
338 Ga0070667_100045221
339 Ga0070703_10000384
340 Ga0070705_100016781
341 Ga0070694_100001689
342 Ga0070694_100064778
343 Ga0070708_100034616
344 Ga0070663_100024814
345 Ga0070681_10000210
346 Ga0070681_10006977
347 Ga0070681_10026223
348 Ga0070681_10037736
349 Ga0070681_10077411
350 Ga0070706_100000223
351 Ga0070706_100027688
352 Ga0070707_100000087
353 Ga0070707_100007935
354 Ga0070707_100122875
355 Ga0070698_100000245
356 Ga0070698_100007556
357 Ga0070698_100012872
358 Ga0070698_100055058
359 Ga0070698_100152784
360 Ga0070699_100022907
361 Ga0070699_100062774
362 Ga0070699_100149721
363 Ga0070679_100000055
364 Ga0070679_100011367
365 Ga0070697_100000754
366 Ga0070697_100002695
367 Ga0070697_100017895
368 Ga0070686_100005461
369 Ga0070686_100012871
370 Ga0070695_100032914
371 Ga0070695_100037021
372 Ga0070695_100069634
373 Ga0070696_100028056
374 Ga0070696_100038980
375 Ga0070696_100070538
376 Ga0070704_100000813
377 Ga0068855_100013564
378 Ga0070664_100002394
379 Ga0070664_100015510
380 Ga0070664_100072657
381 Ga0068857_100006124
382 Ga0068857_100058762
383 Ga0068854_100088115
384 Ga0068856_100007846
385 Ga0070702_100027454
386 Ga0070702_100033973
387 Ga0068852_100047271
388 Ga0068859_100021094
389 Ga0068859_100028242
390 Ga0068864_100010968
391 Ga0068864_100027030
392 Ga0068866_10004500
393 Ga0068851_10045186
394 Ga0068858_100000770
395 Ga0068858_100066645
396 Ga0068858_100076339
397 Ga0068858_100145446
398 Ga0068858_100199586
399 Ga0068860_100007345
400 Ga0068860_100009533
401 Ga0068860_100071528
402 Ga0068862_100006663
403 Ga0068862_100096913
404 Ga0081540_1044601
405 Ga0070716_100000016
406 Ga0097621_100026747
407 Ga0068871_100027966
408 Ga0075430_100083969
409 Ga0075431_100004609
410 Ga0075433_10020250
411 Ga0075433_10034920
412 Ga0075433_10050114
413 Ga0075434_100051344
414 Ga0075429_100013349
415 Ga0075436_100000009
416 Ga0097620_100021092
417 Ga0097620_100028241
418 Ga0075435_100000474
419 Ga0075435_100053940
420 Ga0105240_10083490
421 Ga0111539_10008874
422 Ga0105247_10000005
423 Ga0105247_10003372
424 Ga0105247_10012030
425 Ga0105247_10087953
426 Ga0114129_10003875
427 Ga0114129_10010589
428 Ga0114129_10014909
429 Ga0114129_10035238
430 Ga0114129_10065243
431 Ga0114129_10188069
432 Ga0105243_10000069
433 Ga0105243_10001117
434 Ga0105243_10052179
435 Ga0105241_10059615
436 Ga0105241_10140870
437 Ga0105242_10000023
438 Ga0105242_10000507
439 Ga0105242_10002021
440 Ga0105242_10012210
441 Ga0105248_10011147
442 Ga0105248_10192332
443 Ga0105237_10035502
444 Ga0105238_10003824
445 Ga0105249_10017976
446 Ga0105249_10024306
447 Ga0105239_10045593
448 Ga0105246_10029376
449 Ga0157371_10100516
450 Ga0157369_10150563
451 Ga0157374_10018289
452 Ga0157374_10038586
453 Ga0157378_10000067
454 Ga0157378_10010493
455 Ga0157378_10017684
456 Ga0157378_10049200
457 Ga0157378_10101592
458 Ga0163162_10001341
459 Ga0163162_10024074
460 Ga0163162_10070396
461 Ga0157372_10005151
462 Ga0157372_10041848
463 Ga0157372_10046401
464 Ga0157372_10189783
465 Ga0157372_10248665
466 Ga0157375_10040424
467 Ga0157375_10042532
468 Ga0157375_10100583
469 Ga0163163_10001634
470 Ga0163163_10008639
471 Ga0163163_10014520
472 Ga0163163_10066754
473 Ga0163163_10118310
474 Ga0157380_10003766
475 Ga0157380_10016941
476 Ga0157379_10092110
477 Ga0207672_1000178
478 Ga0207653_10000014
479 Ga0207642_10012796
480 Ga0207710_10000004
481 Ga0207710_10002224
482 Ga0207710_10007959
483 Ga0207647_10016561
484 Ga0207643_10032739
485 Ga0207643_10053701
486 Ga0207705_10007741
487 Ga0207684_10000312
488 Ga0207684_10014931
489 Ga0207684_10017514
490 Ga0207707_10000003
491 Ga0207707_10033098
492 Ga0207695_10028410
493 Ga0207660_10001940
494 Ga0207657_10012722
495 Ga0207657_10012763
496 Ga0207652_10000111
497 Ga0207652_10031254
498 Ga0207646_10001821
499 Ga0207646_10005658
500 Ga0207681_10000963
501 Ga0207681_10057782
502 Ga0207694_10016069
503 Ga0207650_10000103
504 Ga0207650_10001428
505 Ga0207644_10001123
506 Ga0207644_10015757
507 Ga0207706_10019912
508 Ga0207686_10000025
509 Ga0207686_10000229
510 Ga0207686_10043839
511 Ga0207709_10000024
512 Ga0207709_10001998
513 Ga0207670_10012919
514 Ga0207665_10000013
515 Ga0207665_10101276
516 Ga0207691_10043606
517 Ga0207689_10009205
518 Ga0207689_10045953
519 Ga0207689_10102363
520 Ga0207679_10031524
521 Ga0207712_10010267
522 Ga0207712_10029933
523 Ga0207677_10098841
524 Ga0207703_10000589
525 Ga0207703_10086412
526 Ga0207703_10119162
527 Ga0207639_10006642
528 Ga0207639_10010435
529 Ga0207678_10062726
530 Ga0207708_10039430
531 Ga0207641_10043828
532 Ga0207648_10075673
533 Ga0207676_10053387
534 Ga0207674_10002848
535 Ga0207674_10037523
536 Ga0207674_10195843
537 Ga0207675_100002974
538 Ga0207698_10046341
539 Ga0207698_10057466
540 Ga0207698_10126838
541 Ga0207428_10003368
542 Ga0268265_10117855
543 Ga0268265_10145321
544 Ga0268264_10017031
545 Ga0307408_100005975
546 Ga0307405_10003798
547 Ga0307405_10015469
548 Ga0307413_10000854
549 Ga0307413_10001401
550 Ga0307410_10000567
551 Ga0307410_10008026
552 Ga0307406_10008130
553 Ga0307406_10067754
554 Ga0307407_10000383
555 Ga0307412_10012813
556 Ga0307409_100000882
557 Ga0307416_100018545
558 Ga0307411_10022628
559 Ga0307415_100000794
560 Ga0307415_100025883
561 Ga0307415_100110811
562 Ga0395905_0029578
563 Ga0451849_0295924
564 Ga0439434_0018422
565 Ga0453684_0074096
566 Ga0495598_0000005
567 Ga0495598_0008030
568 Ga0495621_0000515
569 Ga0495668_0000708
570 Ga0495674_0036961
571 Ga0495672_0088144
572 Ga0496102_0027588
573 Ga0496106_0173833
574 Ga0496109_0055325
575 Ga0496114_0025100
576 Ga0496114_0056084
577 Ga0501072_0045327
578 nmdc:mga05p37_4997_c1
579 nmdc:mga0qj67_166703_c1
580 nmdc:mga08y16_104614_c1
581 nmdc:mga0n895_203862_c1
582 nmdc:mga0n895_52856_c1
583 nmdc:mga0rr50_124481_c1
584 nmdc:mga0rr50_344_c1
585 nmdc:mga08x19_31_c1
586 nmdc:mga0a205_18164_c1
587 nmdc:mga0a205_34121_c1
588 nmdc:mga0a205_48419_c1
589 nmdc:mga0a205_70020_c1
590 Ga0500577_0003652

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02355

SecD_SecF

Protein export membrane protein

380

562

0.95

PF22599

SecDF_P1_head

SecDF, P1 head subdomain

274

388

0.94

PF07549

Sec_GG

SecD/SecF GG Motif

49

69

0.93

PF21760

SecD_1st

Protein translocase subunit SecDF, P1 domain, N-terminal

166

228

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3aqo-assembly2.cif.gz_B structure and function of a membrane component secdf that enhances protein export 0.7582 163 391
2eg1-assembly1.cif.gz_A the crystal structure of pii protein 0.7183 168 212
3aqo-assembly2.cif.gz_B structure and function of a membrane component secdf that enhances protein export 0.7031 163 391
6rfq-assembly1.cif.gz_G cryo-em structure of a respiratory complex i assembly intermediate with ndufaf2 0.6391 294 316
6x89-assembly1.cif.gz_S3 vigna radiata mitochondrial complex i* 0.6218 295 317
ID Description Score Start End Superfamily
af_Q2FXT8_201_397_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7746 372 531 1.20.1640.10
af_K7DYL5_673_865_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7704 399 536 1.20.1640.10
af_P0AG90_434_612_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7686 389 536 1.20.1640.10
af_P18502_945_1111_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7596 400 527 1.20.1640.10
af_P0AG93_119_318_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7395 391 536 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A2V8MU44-F1-model_v4 Protein translocase subunit SecD 0.9472 161 394 GO:0005886
GO:0015031
AF-X1GQX6-F1-model_v4 Protein translocase subunit SecD 0.8917 10 463 GO:0005886
GO:0006886
GO:0015450
AF-A0A350M958-F1-model_v4 SecDF P1 head subdomain domain-containing protein 0.8789 216 375
AF-A0A7X1ZPW4-F1-model_v4 Protein translocase subunit SecD 0.8757 7 425 GO:0005886
GO:0006886
GO:0015450
AF-A0A524K2K6-F1-model_v4 Protein translocase subunit SecD 0.8719 1 398 GO:0005886
GO:0015031

Map