F392391

General Info

Members Datasets Scaffolds Average Seq Length
294 249 588 922

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2863404153|2863409101
Length 1090
Sequence SDRHEYPAHWEADVVLRDGGTARIRPITVDDAERLVSFYEQVSDESKYYRFFAPYPRLSAKDVHRFTHHDFVDRVGLAATVGGEFIATVRYDRIGADGMPASAPADEAEVAFLVQDAHQGRGVASALLEHIAAVARERGIRRFAAEVLPANSKMIKVFTDAGYQQQRSFEDGVVRLEFDLEPTDRSVAVQRAREQRAEARSVQRLLAPGSVAVVGAGRTPGGVGRSVLANLREAGFTGRLYAVNKALGEDEKELAGVPAHRSVTDIEGPVDLAVVAVPAAHVPQVVAECGEHGVQGLVVVSAGYAESGPEGRERQRELVRQARTYGMRIIGPNAFGIINTAPDVRLNASLAPQTPRSGRIGLFAQSGAIGIALLSRLHRRGGGVTGVTGVSTFVSSGNRADVSGNDVLQYWYEDPDTDVVLMYLESIGNPRKFTRLARRTAAVKPLVVVQGARHGSAPLGHAVRATQLPHTTVSALLRQAGVIRVDTITELVDAGLLLARQPLPAGPRVAILGNSESLGMLTYDACLSEGLRPLPPLDLTTGASAQDFHAALSRALADDSCDAVVVTAIPALGETSPGDAALAEALRSAAAANPSKPVLVVHVELGGLAEALSAAASTAPQSIDKPAGATATAPLHGSPTDEAAGATRGETAVRPERTGEATGAASPPGAAVADGAQRAVTTRQTPGAGAATPAPGGAAPPADSSTAGPGVTGPGAVGPGPAGSGAAGPRAAGSDVPGLGTNDRGPADPGGPHPDQPVPGAARSGVTGGPGGAAQGPAGVPGGPASAVAGVGPGAVTSVESGGSRLIPAYPAAERAVRALSEAVNYAQWRREAAEPGRVPEYEDIDEKGAAEQIDALLARGEGLTLGEDETGALLARYGIRLRRARPAPTPDEAARAARLIGYPVALKTTAPHLRHRADLGGVRLDLADEEQLRRAYAELTELFGCPDELRPVVQGMAPRGVDTIVRTVVDPAAGAVLSFGLAGPASQLLGDMAHRLIPATERDAAALVRSIRTAPLLFGWRGSAPVDTEALEELLLRVSRLVDDHPEVVAVSLEPVVVAPQGLSVLGATVRLARPPVRDDLGPRTLPVY

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
28 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
29 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
45 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
56 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
57 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
58 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
59 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
60 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
61 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
62 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
63 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
64 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
82 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
83 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
84 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
87 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
94 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
145 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
146 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
147 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
148 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
149 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
150 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
151 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
152 2643221548 Streptomyces sp. Root55 Isolate Unclassified
153 2643221561 Nocardioides sp. Root151 Isolate Unclassified
154 2643221578 Streptomyces sp. Root63 Isolate Unclassified
155 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
156 2643221604 Nocardioides sp. Root190 Isolate Unclassified
157 2643221613 Oerskovia sp. Root22 Isolate Unclassified
158 2643221615 Nocardioides sp. Root224 Isolate Unclassified
159 2643221617 Nocardioides sp. Root79 Isolate Unclassified
160 2643221620 Nocardioides sp. Root240 Isolate Unclassified
161 2643221647 Streptomyces sp. Root369 Isolate Unclassified
162 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
163 2643221670 Streptomyces sp. Root431 Isolate Unclassified
164 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
165 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
166 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
167 2643221679 Angustibacter sp. Root456 Isolate Unclassified
168 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
169 2643221696 Nocardioides sp. Root140 Isolate Unclassified
170 2643221714 Streptomyces sp. Root264 Isolate Unclassified
171 2643221721 Oerskovia sp. Root918 Isolate Unclassified
172 2738541305 Nocardioides sp. CF167 Isolate Unclassified
173 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
174 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
175 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
176 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
177 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
178 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
179 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
180 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
181 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
182 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
183 2808606394 Promicromonospora sp. C35 Isolate Unclassified
184 2808606448 Streptomyces sp. 193411 Isolate Unclassified
185 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
186 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
187 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
188 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
189 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
190 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
191 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
192 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
193 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
194 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
195 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
196 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
197 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
198 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
199 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
200 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
201 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
202 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
203 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
204 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
205 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
206 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
207 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
208 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
209 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
210 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
211 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
212 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
213 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
214 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
215 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
216 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
217 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
218 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
219 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
220 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
221 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
222 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
223 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
224 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
225 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
226 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
227 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
228 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
229 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
230 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
231 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
232 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
233 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
234 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
235 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
236 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
237 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
238 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
239 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
240 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
241 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
242 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
243 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
244 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
245 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
246 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
247 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
248 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
249 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 63.27
Metatranscriptomes 0.68
Isolates 36.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.4
Nodule 0.68
Rhizoplane 5.44
Rhizosphere 69.39
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1141193 3300003578 Bacteria 4620
2 Ga0070683_100001765 3300005329 Bacteria 16830
3 Ga0070680_100043529 3300005336 Bacteria 3647
4 Ga0070682_100017031 3300005337 Bacteria 4232
5 Ga0070660_100046102 3300005339 Bacteria 3340
6 Ga0070687_100006878 3300005343 Bacteria 4695
7 Ga0070692_10001298 3300005345 Bacteria 8972
8 Ga0070700_100001307 3300005441 Bacteria 12371
9 Ga0068867_100004896 3300005459 Bacteria 9426
10 Ga0070684_100001108 3300005535 Bacteria 19295
11 Ga0070665_100003000 3300005548 Bacteria 18214
12 Ga0068857_100004947 3300005577 Bacteria 11317
13 Ga0068866_10005481 3300005718 Bacteria 5239
14 Ga0075365_10001053 3300006038 Bacteria 11915
15 Ga0075363_100001653 3300006048 Bacteria 8627
16 Ga0075370_10005291 3300006353 Bacteria 6393
17 Ga0068865_100002418 3300006881 Bacteria 11025
18 Ga0105245_10009430 3300009098 Bacteria 8515
19 Ga0105243_10004890 3300009148 Bacteria 10513
20 Ga0105248_10071737 3300009177 Bacteria 3891
21 Ga0105239_10006220 3300010375 Bacteria 13893
22 Ga0105246_10001245 3300011119 Bacteria 14952
23 Ga0163162_10002722 3300013306 Bacteria 16762
24 Ga0157372_10002563 3300013307 Bacteria 19710
25 Ga0157372_10057162 3300013307 Bacteria 4360
26 Ga0182008_10000172 3300014497 Bacteria 50594
27 Ga0157379_10021959 3300014968 Bacteria 5655
28 Ga0182007_10001778 3300015262 Bacteria 11257
29 Ga0183367_1001 3300015688 Bacteria 1225545
30 Ga0163161_10031130 3300017792 Bacteria 3800
31 Ga0206353_11773569 3300020082 Bacteria 8901
32 Ga0207426_1004587 3300025302 Bacteria 6664
33 Ga0207426_1008068 3300025302 Bacteria 4313
34 Ga0207642_10004744 3300025899 Bacteria 4390
35 Ga0207643_10000932 3300025908 Bacteria 17549
36 Ga0207705_10042199 3300025909 Bacteria 3275
37 Ga0207659_10015778 3300025926 Bacteria 4905
38 Ga0207709_10004667 3300025935 Bacteria 7880
39 Ga0207691_10004074 3300025940 Bacteria 14179
40 Ga0207691_10039671 3300025940 Bacteria 4355
41 Ga0207640_10011612 3300025981 Bacteria 4991
42 Ga0207708_10000227 3300026075 Bacteria 44512
43 Ga0207648_10000576 3300026089 Bacteria 41193
44 Ga0207674_10011189 3300026116 Bacteria 10086
45 Ga0268266_10049460 3300028379 Bacteria 3606
46 Ga0307515_10007146 3300028794 Bacteria 22162
47 Ga0307511_10002952 3300030521 Bacteria 17623
48 Ga0307512_10002924 3300030522 Bacteria 20655
49 Ga0307508_10006249 3300031616 Bacteria 11223
50 Ga0307508_10010807 3300031616 Bacteria 8348
51 Ga0307508_10052112 3300031616 Bacteria 3636
52 Ga0307514_10031881 3300031649 Bacteria 4223
53 Ga0316576_10000173 3300031727 Bacteria 26391
54 Ga0307516_10001470 3300031730 Bacteria 32516
55 Ga0307516_10006289 3300031730 Bacteria 13957
56 Ga0307510_10035100 3300033180 Bacteria 5605
57 Ga0316574_0002292 3300035398 Bacteria 9531
58 Ga0395899_0005464 3300037312 Bacteria 9857
59 Ga0395898_0013483 3300037466 Bacteria 8415
60 Ga0395901_0103265 3300038443 Bacteria 2991
61 Ga0400485_22316 3300038735 Bacteria 100302
62 Ga0400486_28906 3300038742 Bacteria 68419
63 Ga0439436_0007553 3300041404 Bacteria 3345
64 Ga0439431_0003824 3300041997 Bacteria 3326
65 Ga0439449_0002643 3300042007 Bacteria 6973
66 Ga0439457_000216 3300042014 Bacteria 15322
67 Ga0450894_000682 3300042131 Bacteria 5655
68 Ga0450898_000034 3300042134 Bacteria 10922
69 Ga0450903_000070 3300042138 Bacteria 20519
70 Ga0439458_0000118 3300042157 Bacteria 16080
71 Ga0466972_0002363 3300044658 Bacteria 9305
72 Ga0466972_0009267 3300044658 Bacteria 4947
73 Ga0466965_0000402 3300044683 Bacteria 14827
74 Ga0466966_0023035 3300044684 Bacteria 4080
75 Ga0466961_0005770 3300044693 Bacteria 7835
76 Ga0466963_0000569 3300044694 Bacteria 17447
77 Ga0466963_0022671 3300044694 Bacteria 3979
78 Ga0466963_0032695 3300044694 Bacteria 3371
79 Ga0466971_0000408 3300044719 Bacteria 16753
80 Ga0466971_0004705 3300044719 Bacteria 5901
81 Ga0466971_0007108 3300044719 Bacteria 4872
82 Ga0466970_0001117 3300044765 Bacteria 13004
83 Ga0466957_0000366 3300044842 Bacteria 22162
84 Ga0466960_0000909 3300044901 Bacteria 10477
85 Ga0466960_0003573 3300044901 Bacteria 5998
86 Ga0466959_0000973 3300045049 Bacteria 17040
87 Ga0466958_0003461 3300045836 Bacteria 8191
88 Ga0466967_0001468 3300045976 Bacteria 13724
89 Ga0466967_0018421 3300045976 Bacteria 5579
90 Ga0466967_0020617 3300045976 Bacteria 5333
91 Ga0466967_0040153 3300045976 Bacteria 4027
92 Ga0495627_005444 3300046453 Bacteria 5133
93 Ga0495603_0000234 3300046455 Bacteria 28916
94 Ga0495603_0003912 3300046455 Bacteria 8871
95 Ga0495603_0008997 3300046455 Bacteria 6040
96 Ga0495629_0002179 3300046459 Bacteria 15126
97 Ga0495629_0004987 3300046459 Bacteria 9956
98 Ga0495629_0012294 3300046459 Bacteria 6199
99 Ga0495638_0026895 3300046460 Bacteria 3727
100 Ga0495582_0002156 3300046473 Bacteria 11012
101 Ga0495605_0010490 3300046474 Bacteria 5181
102 Ga0495639_0015045 3300046475 Bacteria 3354
103 Ga0495662_0007264 3300046476 Bacteria 5483
104 Ga0495664_0004554 3300046477 Bacteria 7584
105 Ga0495585_0003204 3300046492 Bacteria 11166
106 Ga0495594_0000206 3300046499 Bacteria 28775
107 Ga0495594_0002853 3300046499 Bacteria 8981
108 Ga0495630_0005128 3300046517 Bacteria 9220
109 Ga0495645_0007985 3300046543 Bacteria 7367
110 Ga0495634_0004841 3300046642 Bacteria 10445
111 Ga0495625_0003876 3300046660 Bacteria 14447
112 Ga0495635_0020463 3300046663 Bacteria 4608
113 Ga0495661_0026720 3300046665 Bacteria 3714
114 Ga0495588_0010459 3300046674 Bacteria 4315
115 Ga0495657_0003644 3300046675 Bacteria 12503
116 Ga0495657_0007279 3300046675 Bacteria 8565
117 Ga0495657_0023429 3300046675 Bacteria 4412
118 Ga0495613_0000356 3300046689 Bacteria 40413
119 Ga0495613_0004724 3300046689 Bacteria 10221
120 Ga0495671_0004685 3300046692 Bacteria 8099
121 Ga0495604_0003072 3300047317 Bacteria 13350
122 Ga0495636_0015429 3300047318 Bacteria 3045
123 Ga0495676_0001900 3300047321 Bacteria 18344
124 Ga0495676_0009675 3300047321 Bacteria 8764
125 Ga0495680_0006440 3300047322 Bacteria 10910
126 Ga0495687_001531 3300047443 Bacteria 21080
127 Ga0495687_010035 3300047443 Bacteria 5230
128 Ga0495681_0000670 3300047470 Bacteria 26016
129 Ga0495686_0016195 3300047472 Bacteria 5062
130 Ga0495593_0011306 3300047673 Bacteria 5129
131 Ga0496102_0021998 3300048905 Bacteria 5647
132 Ga0496102_0051444 3300048905 Bacteria 3753
133 Ga0496103_0004544 3300048906 Bacteria 8399
134 Ga0496104_0001933 3300048907 Bacteria 17969
135 Ga0496105_0003907 3300048908 Bacteria 11143
136 Ga0496107_0010931 3300048910 Bacteria 6314
137 Ga0496108_0035093 3300048911 Bacteria 4168
138 Ga0496108_0080606 3300048911 Bacteria 2757
139 Ga0496109_0011016 3300048912 Bacteria 7750
140 Ga0496110_0038467 3300048913 Bacteria 4163
141 Ga0496111_0005152 3300048914 Bacteria 8335
142 Ga0496113_0032210 3300048916 Bacteria 3809
143 Ga0496114_0006970 3300048917 Bacteria 8905
144 Ga0496114_0049738 3300048917 Bacteria 3489
145 Ga0496115_0004397 3300048918 Bacteria 10203
146 Ga0501031_0001407 3300049568 Bacteria 14890
147 Ga0501032_0012023 3300049569 Bacteria 6196
148 Ga0501033_0001985 3300049570 Bacteria 17832
149 Ga0501033_0010861 3300049570 Bacteria 6981
150 Ga0501033_0019458 3300049570 Bacteria 5135
151 Ga0501033_0032984 3300049570 Bacteria 3888
152 Ga0501034_0002768 3300049571 Bacteria 20564
153 Ga0501034_0007832 3300049571 Bacteria 11363
154 Ga0501034_0009740 3300049571 Bacteria 10046
155 Ga0501034_0011349 3300049571 Bacteria 9238
156 Ga0501034_0012178 3300049571 Bacteria 8895
157 Ga0501034_0044213 3300049571 Bacteria 4505
158 Ga0501038_0006762 3300049574 Bacteria 10592
159 Ga0501038_0020276 3300049574 Bacteria 5980
160 Ga0501043_0001463 3300049579 Bacteria 20640
161 Ga0501047_0000074 3300049581 Bacteria 125728
162 Ga0501067_0000658 3300049583 Bacteria 18523
163 Ga0501069_0011276 3300049585 Bacteria 4741
164 Ga0501070_0001159 3300049586 Bacteria 23581
165 Ga0501070_0009129 3300049586 Bacteria 8386
166 Ga0501070_0011829 3300049586 Bacteria 7368
167 Ga0501070_0021094 3300049586 Bacteria 5466
168 Ga0501072_0014236 3300049588 Bacteria 6094
169 Ga0501073_0008664 3300049589 Bacteria 7535
170 Ga0501074_0003560 3300049590 Bacteria 11042
171 Ga0501074_0013549 3300049590 Bacteria 5926
172 Ga0501074_0015524 3300049590 Bacteria 5536
173 Ga0501077_0010813 3300049593 Bacteria 5686
174 Ga0501079_0037742 3300049741 Bacteria 3724
175 Ga0501080_0013400 3300049742 Bacteria 7542
176 Ga0501035_0002096 3300049822 Bacteria 19849
177 Ga0501035_0008246 3300049822 Bacteria 9706
178 Ga0501044_0000395 3300049823 Bacteria 54228
179 nmdc:mga03n38_2225_c1 3300050490 Bacteria 5926
180 nmdc:mga0yw44_14784_c1 3300050492 Bacteria 4157
181 nmdc:mga0yw44_1612_c1 3300050492 Bacteria 9069
182 nmdc:mga07m45_709_c2 3300050496 Bacteria 11165
183 Ga0495619_0013852 3300053085 Bacteria 5088
184 Ga0500560_001119 3300053107 Bacteria 4398
185 Ga0501084_0006631 3300054114 Bacteria 9523
186 Ga0501082_0008067 3300060353 Bacteria 9085
187 Ga0466962_0001573 3300061719 Bacteria 10679
188 Ga0466962_0005755 3300061719 Bacteria 5955
189 2863409101 2863404153 Bacteria 9672205
190 2547407328 2547132111 Bacteria 8013147
191 2554255835 2554235005 Bacteria 6457341
192 2585297289 2582581312 Bacteria 7308206
193 2585310096 2582581313 Bacteria 10042643
194 2585318496 2582581314 Bacteria 11452267
195 2616699257 2616644814 Bacteria 11555299
196 2616902275 2616644941 Bacteria 8510691
197 2643761374 2643221548 Bacteria 8053412
198 2643825684 2643221561 Bacteria 4984412
199 2643899006 2643221578 Bacteria 9213798
200 2643943055 2643221587 Bacteria 7586415
201 2644036206 2643221604 Bacteria 5014917
202 2644083186 2643221613 Bacteria 4622396
203 2644089457 2643221615 Bacteria 5487866
204 2644102010 2643221617 Bacteria 5139111
205 2644115233 2643221620 Bacteria 5134593
206 2644265011 2643221647 Bacteria 10741251
207 2644319302 2643221657 Bacteria 5490246
208 2644388436 2643221670 Bacteria 6497041
209 2644402764 2643221673 Bacteria 9196637
210 2644430515 2643221677 Bacteria 7584031
211 2644442354 2643221678 Bacteria 9540101
212 2644445378 2643221679 Bacteria 3839507
213 2644459224 2643221682 Bacteria 6743283
214 2644531678 2643221696 Bacteria 5431823
215 2644626481 2643221714 Bacteria 9015452
216 2644665706 2643221721 Bacteria 4486924
217 2738870206 2738541305 Bacteria 4910150
218 2739605837 2739367654 Bacteria 6049412
219 2768646405 2767802112 Bacteria 6465194
220 2784471987 2784132109 Bacteria 3141763
221 2784590818 2784132148 Bacteria 8627943
222 2785340724 2784746763 Bacteria 9783172
223 2785372043 2784746768 Bacteria 10036182
224 2786673156 2786546132 Bacteria 10419719
225 2804848364 2802429296 Bacteria 7227771
226 2808844543 2808606359 Bacteria 9866990
227 2808914119 2808606375 Bacteria 9466072
228 2809029078 2808606394 Bacteria 6248540
229 2809234572 2808606448 Bacteria 8656184
230 2811843959 2808606982 Bacteria 7791042
231 2812333427 2811994874 Bacteria 5367947
232 2812355490 2811994879 Bacteria 9313447
233 2812478341 2811994917 Bacteria 7761064
234 2819697686 2818991463 Bacteria 7948711
235 2848552327 2848551377 Bacteria 3720646
236 2852641549 2852635781 Bacteria 8251373
237 2855387907 2855386786 Bacteria 4752232
238 2862180325 2862178590 Bacteria 8583590
239 2862284140 2862281513 Bacteria 9621493
240 2862297121 2862290372 Bacteria 7471434
241 2862383359 2862382967 Bacteria 10317375
242 2862707464 2862705112 Bacteria 6563286
243 2867350791 2867346516 Bacteria 7608576
244 2873153622 2873151551 Bacteria 8625867
245 2875397186 2875391855 Bacteria 7600475
246 2877678532 2877676314 Bacteria 9512378
247 2884995689 2884994152 Bacteria 4492978
248 2912717100 2912715099 Bacteria 9460473
249 2912729706 2912723979 Bacteria 8557534
250 2912763243 2912757875 Bacteria 7940295
251 2919474180 2919468124 Bacteria 9133025
252 2935393541 2935390628 Bacteria 7043367
253 2935890850 2935890801 Bacteria 4593001
254 2946047378 2946045630 Bacteria 8527308
255 2946070318 2946064051 Bacteria 8957905
256 2946078191 2946072368 Bacteria 8999607
257 2947226452 2947224130 Bacteria 9938529
258 2954010616 2954002825 Bacteria 9173742
259 2954383504 2954380949 Bacteria 10050426
260 2954679473 2954673503 Bacteria 9685905
261 2954684683 2954682443 Bacteria 9862841
262 2954694296 2954691527 Bacteria 10720516
263 2954709499 2954701450 Bacteria 10834262
264 2954713802 2954711539 Bacteria 10867210
265 2954723769 2954721474 Bacteria 10456478
266 2954738067 2954731030 Bacteria 10243860
267 2954742669 2954740390 Bacteria 10229294
268 2954756925 2954749733 Bacteria 10366972
269 2954761633 2954759201 Bacteria 9358192
270 2966600418 2966598605 Bacteria 7676064
271 2990049270 2990044586 Bacteria 6603797
272 2990067457 2990059506 Bacteria 9321252
273 2997454904 2997451912 Bacteria 8492419
274 2997602657 2997600082 Bacteria 9896405
275 3001891287 3001889506 Bacteria 2975194
276 3006426202 3006425503 Bacteria 6491253
277 3006486517 3006486233 Bacteria 8157040
278 3006501622 3006493962 Bacteria 8825450
279 8004024536 8004021418 Bacteria 4313954
280 8004025970 8004025490 Bacteria 4327753
281 8008490098 8008485437 Bacteria 7198341
282 8008563266 8008558824 Bacteria 10610750
283 8008576697 8008574985 Bacteria 7815457
284 8023628452 8023623736 Bacteria 8593882
285 8025417289 8025413630 Bacteria 7014048
286 8025481371 8025478263 Bacteria 8209203
287 8025529169 8025524527 Bacteria 7197316
288 8047895635 8047893842 Bacteria 11723082
289 8048129973 8048127548 Bacteria 11053136
290 8048363304 8048356638 Bacteria 11044339
291 8048372658 8048369669 Bacteria 11666822
292 8048381593 8048379754 Bacteria 11877923
293 8048408766 8048406513 Bacteria 8936924
294 8056669866 8056667051 Bacteria 6953971
295 Ga0006562J51391_1141193
296 Ga0070683_100001765
297 Ga0070680_100043529
298 Ga0070682_100017031
299 Ga0070660_100046102
300 Ga0070687_100006878
301 Ga0070692_10001298
302 Ga0070700_100001307
303 Ga0068867_100004896
304 Ga0070684_100001108
305 Ga0070665_100003000
306 Ga0068857_100004947
307 Ga0068866_10005481
308 Ga0075365_10001053
309 Ga0075363_100001653
310 Ga0075370_10005291
311 Ga0068865_100002418
312 Ga0105245_10009430
313 Ga0105243_10004890
314 Ga0105248_10071737
315 Ga0105239_10006220
316 Ga0105246_10001245
317 Ga0163162_10002722
318 Ga0157372_10002563
319 Ga0157372_10057162
320 Ga0182008_10000172
321 Ga0157379_10021959
322 Ga0182007_10001778
323 Ga0183367_1001
324 Ga0163161_10031130
325 Ga0206353_11773569
326 Ga0207426_1004587
327 Ga0207426_1008068
328 Ga0207642_10004744
329 Ga0207643_10000932
330 Ga0207705_10042199
331 Ga0207659_10015778
332 Ga0207709_10004667
333 Ga0207691_10004074
334 Ga0207691_10039671
335 Ga0207640_10011612
336 Ga0207708_10000227
337 Ga0207648_10000576
338 Ga0207674_10011189
339 Ga0268266_10049460
340 Ga0307515_10007146
341 Ga0307511_10002952
342 Ga0307512_10002924
343 Ga0307508_10006249
344 Ga0307508_10010807
345 Ga0307508_10052112
346 Ga0307514_10031881
347 Ga0316576_10000173
348 Ga0307516_10001470
349 Ga0307516_10006289
350 Ga0307510_10035100
351 Ga0316574_0002292
352 Ga0395899_0005464
353 Ga0395898_0013483
354 Ga0395901_0103265
355 Ga0400485_22316
356 Ga0400486_28906
357 Ga0439436_0007553
358 Ga0439431_0003824
359 Ga0439449_0002643
360 Ga0439457_000216
361 Ga0450894_000682
362 Ga0450898_000034
363 Ga0450903_000070
364 Ga0439458_0000118
365 Ga0466972_0002363
366 Ga0466972_0009267
367 Ga0466965_0000402
368 Ga0466966_0023035
369 Ga0466961_0005770
370 Ga0466963_0000569
371 Ga0466963_0022671
372 Ga0466963_0032695
373 Ga0466971_0000408
374 Ga0466971_0004705
375 Ga0466971_0007108
376 Ga0466970_0001117
377 Ga0466957_0000366
378 Ga0466960_0000909
379 Ga0466960_0003573
380 Ga0466959_0000973
381 Ga0466958_0003461
382 Ga0466967_0001468
383 Ga0466967_0018421
384 Ga0466967_0020617
385 Ga0466967_0040153
386 Ga0495627_005444
387 Ga0495603_0000234
388 Ga0495603_0003912
389 Ga0495603_0008997
390 Ga0495629_0002179
391 Ga0495629_0004987
392 Ga0495629_0012294
393 Ga0495638_0026895
394 Ga0495582_0002156
395 Ga0495605_0010490
396 Ga0495639_0015045
397 Ga0495662_0007264
398 Ga0495664_0004554
399 Ga0495585_0003204
400 Ga0495594_0000206
401 Ga0495594_0002853
402 Ga0495630_0005128
403 Ga0495645_0007985
404 Ga0495634_0004841
405 Ga0495625_0003876
406 Ga0495635_0020463
407 Ga0495661_0026720
408 Ga0495588_0010459
409 Ga0495657_0003644
410 Ga0495657_0007279
411 Ga0495657_0023429
412 Ga0495613_0000356
413 Ga0495613_0004724
414 Ga0495671_0004685
415 Ga0495604_0003072
416 Ga0495636_0015429
417 Ga0495676_0001900
418 Ga0495676_0009675
419 Ga0495680_0006440
420 Ga0495687_001531
421 Ga0495687_010035
422 Ga0495681_0000670
423 Ga0495686_0016195
424 Ga0495593_0011306
425 Ga0496102_0021998
426 Ga0496102_0051444
427 Ga0496103_0004544
428 Ga0496104_0001933
429 Ga0496105_0003907
430 Ga0496107_0010931
431 Ga0496108_0035093
432 Ga0496108_0080606
433 Ga0496109_0011016
434 Ga0496110_0038467
435 Ga0496111_0005152
436 Ga0496113_0032210
437 Ga0496114_0006970
438 Ga0496114_0049738
439 Ga0496115_0004397
440 Ga0501031_0001407
441 Ga0501032_0012023
442 Ga0501033_0001985
443 Ga0501033_0010861
444 Ga0501033_0019458
445 Ga0501033_0032984
446 Ga0501034_0002768
447 Ga0501034_0007832
448 Ga0501034_0009740
449 Ga0501034_0011349
450 Ga0501034_0012178
451 Ga0501034_0044213
452 Ga0501038_0006762
453 Ga0501038_0020276
454 Ga0501043_0001463
455 Ga0501047_0000074
456 Ga0501067_0000658
457 Ga0501069_0011276
458 Ga0501070_0001159
459 Ga0501070_0009129
460 Ga0501070_0011829
461 Ga0501070_0021094
462 Ga0501072_0014236
463 Ga0501073_0008664
464 Ga0501074_0003560
465 Ga0501074_0013549
466 Ga0501074_0015524
467 Ga0501077_0010813
468 Ga0501079_0037742
469 Ga0501080_0013400
470 Ga0501035_0002096
471 Ga0501035_0008246
472 Ga0501044_0000395
473 nmdc:mga03n38_2225_c1
474 nmdc:mga0yw44_14784_c1
475 nmdc:mga0yw44_1612_c1
476 nmdc:mga07m45_709_c2
477 Ga0495619_0013852
478 Ga0500560_001119
479 Ga0501084_0006631
480 Ga0501082_0008067
481 Ga0466962_0001573
482 Ga0466962_0005755
483 2863409101
484 2547407328
485 2554255835
486 2585297289
487 2585310096
488 2585318496
489 2616699257
490 2616902275
491 2643761374
492 2643825684
493 2643899006
494 2643943055
495 2644036206
496 2644083186
497 2644089457
498 2644102010
499 2644115233
500 2644265011
501 2644319302
502 2644388436
503 2644402764
504 2644430515
505 2644442354
506 2644445378
507 2644459224
508 2644531678
509 2644626481
510 2644665706
511 2738870206
512 2739605837
513 2768646405
514 2784471987
515 2784590818
516 2785340724
517 2785372043
518 2786673156
519 2804848364
520 2808844543
521 2808914119
522 2809029078
523 2809234572
524 2811843959
525 2812333427
526 2812355490
527 2812478341
528 2819697686
529 2848552327
530 2852641549
531 2855387907
532 2862180325
533 2862284140
534 2862297121
535 2862383359
536 2862707464
537 2867350791
538 2873153622
539 2875397186
540 2877678532
541 2884995689
542 2912717100
543 2912729706
544 2912763243
545 2919474180
546 2935393541
547 2935890850
548 2946047378
549 2946070318
550 2946078191
551 2947226452
552 2954010616
553 2954383504
554 2954679473
555 2954684683
556 2954694296
557 2954709499
558 2954713802
559 2954723769
560 2954738067
561 2954742669
562 2954756925
563 2954761633
564 2966600418
565 2990049270
566 2990067457
567 2997454904
568 2997602657
569 3001891287
570 3006426202
571 3006486517
572 3006501622
573 8004024536
574 8004025970
575 8008490098
576 8008563266
577 8008576697
578 8023628452
579 8025417289
580 8025481371
581 8025529169
582 8047895635
583 8048129973
584 8048363304
585 8048372658
586 8048381593
587 8048408766
588 8056669866

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13549

ATP-grasp_5

ATP-grasp domain

857

1073

0.96

PF02629

CoA_binding

CoA binding domain

207

303

0.94

PF13380

CoA_binding_2

CoA binding domain

209

340

0.94

PF13607

Succ_CoA_lig

Succinyl-CoA ligase like flavodoxin domain

357

498

0.9

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

36

163

0.79

PF13302

Acetyltransf_3

Acetyltransferase (GNAT) domain

22

164

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_A crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9548 10 183
4nxy-assembly1.cif.gz_A crystal structure of the gnat domain of s. lividans pat 0.9543 9 183
4nxy-assembly1.cif.gz_A crystal structure of the gnat domain of s. lividans pat 0.9437 9 183
4u5y-assembly1.cif.gz_A crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9436 10 183
3f8k-assembly1.cif.gz_A crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus 0.8616 28 183
ID Description Score Start End Superfamily
4u5yA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9548 10 183 3.40.630.30
4u5yA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9436 10 183 3.40.630.30
4xz3B01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9293 795 911 3.30.470.20
4xymA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8975 206 337 3.40.50.720
1wr2A01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8937 685 913 3.30.470.20
ID Description Score Start End GO Terms
AF-X1FGD7-F1-model_v4 Acetyl-CoA synthetase 0.9707 806 909
AF-A0A7Y2ZZQ4-F1-model_v4 Acetate--CoA ligase family protein 0.9684 795 911 GO:0016874
AF-A0A6I5C448-F1-model_v4 Acyl-CoA synthetase 0.9637 290 574
AF-A0A6B3ETD3-F1-model_v4 Acyl-CoA synthetase 0.9618 265 445
AF-A0A6I5C448-F1-model_v4 Acyl-CoA synthetase 0.9571 290 574

Map