F392390

General Info

Members Datasets Scaffolds Average Seq Length
294 217 588 564

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862290372|2862295483
Length 612
Sequence DSAGVDNAVRPLRIGNASGFYGDRFEAVREMLSGGELDVLTGDYLAELTMLILGRDRLRDPGLGYAKTFLRQLEDCLGLAHERGVRIVTNAGGLNPAGLASAVRELAGRAGVPARVAHVEGDDLLARGGWGEGVLTANAYLGGEGITACLRAGADVVVTGRVTDAALVTGPAAWWFDWDRDTAPHRTTSPARDRTTPSTSMSTSASKSTSTPTSYEAALAGAVVAGHVLECGTQATGGNYAFFAEALAAGRDLRRPGFPLAEIHADGSAVITKHPGTGGLVDVDTVTAQLLYETGGARYAGPDVTARLDSVTLTQEGPDRVRVAGVEGEPPPPTLKTGLNRLGGWRNEIVFVLTGLDIEAKAALVKAQLADALAKHPPAHVSWELSRTDRPDASTEETASALLRLVVRDPEQEAVGRRLTSAAVELGLAGYPGFHLTAPPGKGSPYGVFEARYVERDAVRHVAVLPDGGRLAVPDPVSTRELAPVPAPPLPEPLPPGPVRRVPLGAVAGARSGDKGGDANIGVWVRTDAAWRWLAHALTVETLRELLPETAELTITRHLFPRLRAVNFVVEGLLGEGVAAQHRFDPQAKGLGEWLRSRHVDVPEQLLWTDGP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
93 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
130 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
169 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
170 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
171 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
172 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
178 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
179 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
180 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
181 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
182 2643221641 Nocardioides sp. Root122 Isolate Unclassified
183 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
184 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
185 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
186 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
187 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
188 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
189 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
190 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
191 2739367898 Nocardioides sp. CF479 Isolate Unclassified
192 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
193 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
194 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
195 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
196 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
197 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
198 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
199 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
200 2862574272 Streptomyces sp. AcE210 Isolate Nodule
201 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
202 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
203 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
204 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
205 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
206 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
207 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
208 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
209 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
210 2922554459 Rhodococcus sp. 66b Isolate Unclassified
211 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
212 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
213 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
214 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
215 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
216 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
217 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.05
Metatranscriptomes 0
Isolates 13.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.54
Nodule 0.68
Rhizoplane 6.12
Rhizosphere 67.69
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10004854 3300003203 Bacteria 6249
2 Ga0055540_1000602 3300003792 Bacteria 25879
3 Ga0055540_1005263 3300003792 Bacteria 5511
4 Ga0055540_1007497 3300003792 Bacteria 4102
5 Ga0070658_10000776 3300005327 Bacteria 27421
6 Ga0070658_10005788 3300005327 Bacteria 10025
7 Ga0070658_10054301 3300005327 Bacteria 3253
8 Ga0070670_100010475 3300005331 Bacteria 7913
9 Ga0068869_100072847 3300005334 Bacteria 2546
10 Ga0070660_100055130 3300005339 Bacteria 3071
11 Ga0070689_100033232 3300005340 Bacteria 3929
12 Ga0070687_100051972 3300005343 Bacteria 2125
13 Ga0070661_100016991 3300005344 Bacteria 5154
14 Ga0070669_100003308 3300005353 Bacteria 11591
15 Ga0070667_100015914 3300005367 Bacteria 6223
16 Ga0070667_100122661 3300005367 Bacteria 2262
17 Ga0070709_10002504 3300005434 Bacteria 9942
18 Ga0070714_100180230 3300005435 Bacteria 1922
19 Ga0070713_100012044 3300005436 Bacteria 6332
20 Ga0070678_100001848 3300005456 Bacteria 11415
21 Ga0070679_100010637 3300005530 Bacteria 8731
22 Ga0070679_100064210 3300005530 Bacteria 3659
23 Ga0068853_100047120 3300005539 Bacteria 3699
24 Ga0070693_100007426 3300005547 Bacteria 5359
25 Ga0068855_100064587 3300005563 Bacteria 4269
26 Ga0068857_100143747 3300005577 Bacteria 2158
27 Ga0068854_100023623 3300005578 Bacteria 4201
28 Ga0068856_100004823 3300005614 Bacteria 13367
29 Ga0068859_100009632 3300005617 Bacteria 9754
30 Ga0068864_100008244 3300005618 Bacteria 8594
31 Ga0068851_10051988 3300005834 Bacteria 2083
32 Ga0068870_10001619 3300005840 Bacteria 9174
33 Ga0068863_100001167 3300005841 Bacteria 26238
34 Ga0068863_100093263 3300005841 Bacteria 2857
35 Ga0068858_100002047 3300005842 Bacteria 20555
36 Ga0068858_100042625 3300005842 Bacteria 4207
37 Ga0068860_100000087 3300005843 Bacteria 158242
38 Ga0068860_100000902 3300005843 Bacteria 32958
39 Ga0081455_10004121 3300005937 Bacteria 16438
40 Ga0081540_1004108 3300005983 Bacteria 11236
41 Ga0081539_10000125 3300005985 Bacteria 180646
42 Ga0075365_10013217 3300006038 Bacteria 4926
43 Ga0075365_10036381 3300006038 Bacteria 3189
44 Ga0075363_100004891 3300006048 Bacteria 5920
45 Ga0075363_100008413 3300006048 Bacteria 4801
46 Ga0075363_100023174 3300006048 Bacteria 3144
47 Ga0075364_10022457 3300006051 Bacteria 3984
48 Ga0075364_10039446 3300006051 Bacteria 3061
49 Ga0075432_10004966 3300006058 Bacteria 4535
50 Ga0075367_10007000 3300006178 Bacteria 5744
51 Ga0075367_10047328 3300006178 Bacteria 2530
52 Ga0075430_100000279 3300006846 Bacteria 35927
53 Ga0075431_100005843 3300006847 Bacteria 12175
54 Ga0097620_100009632 3300006931 Bacteria 9754
55 Ga0075435_100134580 3300007076 Bacteria 2069
56 Ga0105245_10002374 3300009098 Bacteria 17034
57 Ga0105247_10000159 3300009101 Bacteria 66013
58 Ga0105247_10011402 3300009101 Bacteria 5361
59 Ga0114129_10128022 3300009147 Bacteria 3490
60 Ga0114129_10269201 3300009147 Bacteria 2280
61 Ga0105243_10000721 3300009148 Bacteria 31750
62 Ga0105241_10015603 3300009174 Bacteria 5566
63 Ga0105241_10017879 3300009174 Bacteria 5214
64 Ga0105248_10000050 3300009177 Bacteria 152667
65 Ga0105248_10020312 3300009177 Bacteria 7359
66 Ga0105248_10024205 3300009177 Bacteria 6749
67 Ga0105249_10000042 3300009553 Bacteria 195242
68 Ga0105239_10039611 3300010375 Bacteria 5162
69 Ga0105239_10161568 3300010375 Bacteria 2503
70 Ga0157370_10073654 3300013104 Bacteria 3222
71 Ga0157369_10015775 3300013105 Bacteria 8513
72 Ga0157374_10091129 3300013296 Bacteria 2907
73 Ga0157372_10000769 3300013307 Bacteria 34731
74 Ga0163163_10026730 3300014325 Bacteria 5520
75 Ga0163163_10040153 3300014325 Bacteria 4568
76 Ga0163163_10212884 3300014325 Bacteria 1982
77 Ga0213876_10020871 3300021384 Bacteria 3463
78 Ga0213875_10000443 3300021388 Bacteria 36140
79 Ga0209758_1004729 3300025297 Bacteria 11088
80 Ga0209051_1000633 3300025303 Bacteria 40448
81 Ga0209051_1006001 3300025303 Bacteria 6944
82 Ga0209051_1021378 3300025303 Bacteria 2757
83 Ga0207656_10035262 3300025321 Bacteria 2094
84 Ga0207710_10000173 3300025900 Bacteria 66353
85 Ga0207647_10011787 3300025904 Bacteria 6112
86 Ga0207647_10061483 3300025904 Bacteria 2292
87 Ga0207699_10009386 3300025906 Bacteria 4869
88 Ga0207705_10000676 3300025909 Bacteria 28263
89 Ga0207705_10020622 3300025909 Bacteria 4706
90 Ga0207705_10025210 3300025909 Bacteria 4246
91 Ga0207654_10018591 3300025911 Bacteria 3650
92 Ga0207707_10138035 3300025912 Bacteria 2132
93 Ga0207671_10001186 3300025914 Bacteria 30947
94 Ga0207660_10007072 3300025917 Bacteria 7271
95 Ga0207657_10033814 3300025919 Bacteria 4604
96 Ga0207652_10025289 3300025921 Bacteria 4934
97 Ga0207681_10004204 3300025923 Bacteria 8895
98 Ga0207694_10005070 3300025924 Bacteria 10185
99 Ga0207650_10006517 3300025925 Bacteria 7959
100 Ga0207664_10033485 3300025929 Bacteria 3948
101 Ga0207690_10023313 3300025932 Bacteria 3862
102 Ga0207691_10065653 3300025940 Bacteria 3284
103 Ga0207711_10000339 3300025941 Bacteria 49741
104 Ga0207689_10004333 3300025942 Bacteria 12926
105 Ga0207661_10002407 3300025944 Bacteria 12885
106 Ga0207661_10020898 3300025944 Bacteria 4900
107 Ga0207679_10017034 3300025945 Bacteria 4836
108 Ga0207712_10000010 3300025961 Bacteria 455972
109 Ga0207677_10009243 3300026023 Bacteria 5537
110 Ga0207703_10046323 3300026035 Bacteria 3502
111 Ga0207639_10098222 3300026041 Bacteria 2360
112 Ga0207678_10001576 3300026067 Bacteria 20952
113 Ga0207678_10052779 3300026067 Bacteria 3505
114 Ga0207702_10001899 3300026078 Bacteria 20432
115 Ga0207641_10001173 3300026088 Bacteria 26309
116 Ga0207641_10027400 3300026088 Bacteria 4705
117 Ga0207676_10003219 3300026095 Bacteria 11637
118 Ga0207676_10074036 3300026095 Bacteria 2742
119 Ga0207683_10000758 3300026121 Bacteria 29348
120 Ga0268264_10000150 3300028381 Bacteria 158263
121 Ga0268264_10000664 3300028381 Bacteria 40313
122 Ga0307515_10000229 3300028794 Bacteria 139040
123 Ga0307515_10022037 3300028794 Bacteria 11252
124 Ga0265338_10023985 3300028800 Bacteria 6248
125 Ga0307512_10009763 3300030522 Bacteria 9218
126 Ga0265325_10010719 3300031241 Bacteria 5289
127 Ga0265340_10013226 3300031247 Bacteria 4342
128 Ga0265339_10009283 3300031249 Bacteria 6196
129 Ga0307513_10006905 3300031456 Bacteria 14777
130 Ga0307513_10052991 3300031456 Bacteria 4364
131 Ga0307508_10016352 3300031616 Bacteria 6753
132 Ga0307508_10055022 3300031616 Bacteria 3526
133 Ga0307516_10000185 3300031730 Bacteria 80941
134 Ga0373951_0000016 3300035091 Bacteria 66469
135 Ga0436364_0936746 3300037853 Bacteria 31021
136 Ga0436365_0876614 3300039437 Bacteria 16871
137 Ga0439463_003762 3300042016 Bacteria 3822
138 Ga0466969_0035484 3300044656 Bacteria 2522
139 Ga0466972_0047526 3300044658 Bacteria 2075
140 Ga0466965_0003156 3300044683 Bacteria 7189
141 Ga0466965_0005738 3300044683 Bacteria 5603
142 Ga0466966_0018536 3300044684 Bacteria 4590
143 Ga0466961_0001904 3300044693 Bacteria 13006
144 Ga0466961_0009641 3300044693 Bacteria 6148
145 Ga0466961_0017386 3300044693 Bacteria 4619
146 Ga0466961_0024694 3300044693 Bacteria 3866
147 Ga0466961_0025583 3300044693 Bacteria 3795
148 Ga0466961_0029023 3300044693 Bacteria 3557
149 Ga0466961_0036102 3300044693 Bacteria 3172
150 Ga0466961_0066122 3300044693 Bacteria 2297
151 Ga0466963_0004428 3300044694 Bacteria 8162
152 Ga0466963_0044665 3300044694 Bacteria 2917
153 Ga0466968_0028562 3300044735 Bacteria 2300
154 Ga0466970_0002406 3300044765 Bacteria 9042
155 Ga0466970_0006884 3300044765 Bacteria 5692
156 Ga0466970_0007625 3300044765 Bacteria 5425
157 Ga0466970_0008698 3300044765 Bacteria 5115
158 Ga0466970_0016090 3300044765 Bacteria 3852
159 Ga0466957_0048253 3300044842 Bacteria 2588
160 Ga0466960_0017235 3300044901 Bacteria 3144
161 Ga0466959_0079437 3300045049 Bacteria 2365
162 Ga0466958_0001433 3300045836 Bacteria 11303
163 Ga0466958_0008313 3300045836 Bacteria 5747
164 Ga0466958_0013684 3300045836 Bacteria 4624
165 Ga0466967_0015609 3300045976 Bacteria 5958
166 Ga0466967_0020615 3300045976 Bacteria 5333
167 Ga0466967_0083315 3300045976 Bacteria 2892
168 Ga0466967_0115019 3300045976 Bacteria 2477
169 Ga0495603_0025353 3300046455 Bacteria 3585
170 Ga0495629_0126392 3300046459 Bacteria 1781
171 Ga0495638_0007658 3300046460 Bacteria 7721
172 Ga0495638_0009062 3300046460 Bacteria 7012
173 Ga0495651_0000280 3300046462 Bacteria 39649
174 Ga0495594_0026989 3300046499 Bacteria 3093
175 Ga0495594_0029140 3300046499 Bacteria 2983
176 Ga0495606_0003316 3300046507 Bacteria 17184
177 Ga0495652_0001343 3300046529 Bacteria 27403
178 Ga0495645_0025609 3300046543 Bacteria 4283
179 Ga0495668_0000265 3300046616 Bacteria 73791
180 Ga0495668_0000407 3300046616 Bacteria 56229
181 Ga0495625_0001241 3300046660 Bacteria 32179
182 Ga0495589_0009885 3300046794 Bacteria 4954
183 Ga0495589_0027541 3300046794 Bacteria 2873
184 Ga0495676_0029804 3300047321 Bacteria 4640
185 Ga0495676_0038534 3300047321 Bacteria 3968
186 Ga0495675_0004687 3300047444 Bacteria 8309
187 Ga0495685_017310 3300047447 Bacteria 2467
188 Ga0495626_0000052 3300048091 Bacteria 156421
189 Ga0496102_0000235 3300048905 Bacteria 72616
190 Ga0496102_0023254 3300048905 Bacteria 5501
191 Ga0496103_0000443 3300048906 Bacteria 35626
192 Ga0496104_0002628 3300048907 Bacteria 15455
193 Ga0496105_0018806 3300048908 Bacteria 5563
194 Ga0496106_0042163 3300048909 Bacteria 3422
195 Ga0496108_0000078 3300048911 Bacteria 104086
196 Ga0496108_0003614 3300048911 Bacteria 12383
197 Ga0496108_0037690 3300048911 Bacteria 4028
198 Ga0496109_0001430 3300048912 Bacteria 19793
199 Ga0496109_0005790 3300048912 Bacteria 10345
200 Ga0496109_0021499 3300048912 Bacteria 5705
201 Ga0496111_0004243 3300048914 Bacteria 9031
202 Ga0496111_0029449 3300048914 Bacteria 3900
203 Ga0496112_0167138 3300048915 Bacteria 2165
204 Ga0496113_0004921 3300048916 Bacteria 8275
205 Ga0496113_0018100 3300048916 Bacteria 4902
206 Ga0496114_0078296 3300048917 Bacteria 2789
207 Ga0496116_0013993 3300048919 Bacteria 6427
208 Ga0496117_0000521 3300048920 Bacteria 63484
209 Ga0496118_0000455 3300048921 Bacteria 67720
210 Ga0496119_0003885 3300048922 Bacteria 15212
211 Ga0496121_0028582 3300048924 Bacteria 5187
212 Ga0496123_0077850 3300048926 Bacteria 2034
213 Ga0496125_0026603 3300048928 Bacteria 5266
214 Ga0496126_0005592 3300048929 Bacteria 14295
215 Ga0496126_0007214 3300048929 Bacteria 12226
216 Ga0501032_0029221 3300049569 Bacteria 3785
217 Ga0501034_0011204 3300049571 Bacteria 9310
218 Ga0501046_0000382 3300049580 Bacteria 44315
219 Ga0501047_0009791 3300049581 Bacteria 9055
220 Ga0501048_0007310 3300049582 Bacteria 8372
221 Ga0501070_0000918 3300049586 Bacteria 26690
222 Ga0501070_0001555 3300049586 Bacteria 20409
223 Ga0501070_0001589 3300049586 Bacteria 20181
224 Ga0501070_0002657 3300049586 Bacteria 15598
225 Ga0501070_0003127 3300049586 Bacteria 14411
226 Ga0501070_0089593 3300049586 Bacteria 2546
227 Ga0501073_0053426 3300049589 Bacteria 2828
228 Ga0501073_0063130 3300049589 Bacteria 2584
229 Ga0501074_0006813 3300049590 Bacteria 8253
230 Ga0501079_0000093 3300049741 Bacteria 43802
231 Ga0501080_0001736 3300049742 Bacteria 18660
232 Ga0501044_0016822 3300049823 Bacteria 7847
233 nmdc:mga03n38_11096_c1 3300050490 Bacteria 3344
234 nmdc:mga03n38_4010_c1 3300050490 Bacteria 4815
235 nmdc:mga00v17_24294_c1 3300050491 Bacteria 3514
236 nmdc:mga00v17_37160_c1 3300050491 Bacteria 2906
237 nmdc:mga0yw44_11884_c1 3300050492 Bacteria 4518
238 nmdc:mga0yw44_28987_c1 3300050492 Bacteria 3191
239 nmdc:mga0yw44_3076_c1 3300050492 Bacteria 7308
240 nmdc:mga05p37_78652_c1 3300050507 Bacteria 4061
241 nmdc:mga0qj67_2674_c1 3300050509 Bacteria 12762
242 nmdc:mga06r32_25384_c1 3300050510 Bacteria 5513
243 nmdc:mga0a205_13761_c1 3300050515 Bacteria 7540
244 Ga0500610_0035769 3300053079 Bacteria 2550
245 Ga0500643_003040 3300053087 Bacteria 8281
246 Ga0500644_0000204 3300053088 Bacteria 35880
247 Ga0500646_0000613 3300053090 Bacteria 10196
248 Ga0500652_006051 3300053131 Bacteria 3863
249 Ga0500616_0002001 3300053153 Bacteria 18066
250 Ga0500616_0043225 3300053153 Bacteria 2409
251 Ga0500645_000421 3300053730 Bacteria 29323
252 Ga0466962_0002533 3300061719 Bacteria 8682
253 Ga0530510_0091301 3300061734 Bacteria 2222
254 2862295483 2862290372 Bacteria 7471434
255 2523383878 2523231044 Bacteria 6434991
256 2566992560 2565956761 Bacteria 6601618
257 2644016914 2643221601 Bacteria 7493239
258 2644177956 2643221631 Bacteria 8168043
259 2644228133 2643221641 Bacteria 4490190
260 2644490587 2643221687 Bacteria 6500351
261 2676486101 2675903059 Bacteria 8644972
262 2738707233 2738541274 Bacteria 6909446
263 2738887553 2738541308 Bacteria 7020677
264 2739202717 2738543005 Bacteria 5278128
265 2739236761 2738543011 Bacteria 5731169
266 2739328548 2738543028 Bacteria 6917070
267 2739366276 2738543034 Bacteria 6084756
268 2740165617 2739367898 Bacteria 4367674
269 2744954492 2744054611 Bacteria 5611514
270 2753035764 2751185725 Bacteria 5740550
271 2753326211 2751185792 Bacteria 5739090
272 2785369507 2784746768 Bacteria 10036182
273 2804847051 2802429296 Bacteria 7227771
274 2811849054 2808606982 Bacteria 7791042
275 2857484924 2857481737 Bacteria 4761446
276 2862180164 2862178590 Bacteria 8583590
277 2862579244 2862574272 Bacteria 10567477
278 2867510507 2867507094 Bacteria 6506033
279 2889305654 2889300758 Bacteria 5690814
280 2902843231 2902837492 Bacteria 6697721
281 2904541578 2904535858 Bacteria 6308016
282 2904767431 2904765812 Bacteria 5369154
283 2904774777 2904770941 Bacteria 5580202
284 2908813082 2908811453 Bacteria 5478616
285 2919423949 2919420072 Bacteria 5390363
286 2919436599 2919432681 Bacteria 5390474
287 2922560045 2922554459 Bacteria 6683962
288 2928143065 2928142448 Bacteria 5288925
289 2932401168 2932398195 Bacteria 3847976
290 2935393407 2935390628 Bacteria 7043367
291 2939743789 2939743619 Bacteria 5762299
292 8025417695 8025413630 Bacteria 7014048
293 8054612084 8054609563 Bacteria 5170090
294 8056063487 8056060235 Bacteria 7259403
295 JGI25406J46586_10004854
296 Ga0055540_1000602
297 Ga0055540_1005263
298 Ga0055540_1007497
299 Ga0070658_10000776
300 Ga0070658_10005788
301 Ga0070658_10054301
302 Ga0070670_100010475
303 Ga0068869_100072847
304 Ga0070660_100055130
305 Ga0070689_100033232
306 Ga0070687_100051972
307 Ga0070661_100016991
308 Ga0070669_100003308
309 Ga0070667_100015914
310 Ga0070667_100122661
311 Ga0070709_10002504
312 Ga0070714_100180230
313 Ga0070713_100012044
314 Ga0070678_100001848
315 Ga0070679_100010637
316 Ga0070679_100064210
317 Ga0068853_100047120
318 Ga0070693_100007426
319 Ga0068855_100064587
320 Ga0068857_100143747
321 Ga0068854_100023623
322 Ga0068856_100004823
323 Ga0068859_100009632
324 Ga0068864_100008244
325 Ga0068851_10051988
326 Ga0068870_10001619
327 Ga0068863_100001167
328 Ga0068863_100093263
329 Ga0068858_100002047
330 Ga0068858_100042625
331 Ga0068860_100000087
332 Ga0068860_100000902
333 Ga0081455_10004121
334 Ga0081540_1004108
335 Ga0081539_10000125
336 Ga0075365_10013217
337 Ga0075365_10036381
338 Ga0075363_100004891
339 Ga0075363_100008413
340 Ga0075363_100023174
341 Ga0075364_10022457
342 Ga0075364_10039446
343 Ga0075432_10004966
344 Ga0075367_10007000
345 Ga0075367_10047328
346 Ga0075430_100000279
347 Ga0075431_100005843
348 Ga0097620_100009632
349 Ga0075435_100134580
350 Ga0105245_10002374
351 Ga0105247_10000159
352 Ga0105247_10011402
353 Ga0114129_10128022
354 Ga0114129_10269201
355 Ga0105243_10000721
356 Ga0105241_10015603
357 Ga0105241_10017879
358 Ga0105248_10000050
359 Ga0105248_10020312
360 Ga0105248_10024205
361 Ga0105249_10000042
362 Ga0105239_10039611
363 Ga0105239_10161568
364 Ga0157370_10073654
365 Ga0157369_10015775
366 Ga0157374_10091129
367 Ga0157372_10000769
368 Ga0163163_10026730
369 Ga0163163_10040153
370 Ga0163163_10212884
371 Ga0213876_10020871
372 Ga0213875_10000443
373 Ga0209758_1004729
374 Ga0209051_1000633
375 Ga0209051_1006001
376 Ga0209051_1021378
377 Ga0207656_10035262
378 Ga0207710_10000173
379 Ga0207647_10011787
380 Ga0207647_10061483
381 Ga0207699_10009386
382 Ga0207705_10000676
383 Ga0207705_10020622
384 Ga0207705_10025210
385 Ga0207654_10018591
386 Ga0207707_10138035
387 Ga0207671_10001186
388 Ga0207660_10007072
389 Ga0207657_10033814
390 Ga0207652_10025289
391 Ga0207681_10004204
392 Ga0207694_10005070
393 Ga0207650_10006517
394 Ga0207664_10033485
395 Ga0207690_10023313
396 Ga0207691_10065653
397 Ga0207711_10000339
398 Ga0207689_10004333
399 Ga0207661_10002407
400 Ga0207661_10020898
401 Ga0207679_10017034
402 Ga0207712_10000010
403 Ga0207677_10009243
404 Ga0207703_10046323
405 Ga0207639_10098222
406 Ga0207678_10001576
407 Ga0207678_10052779
408 Ga0207702_10001899
409 Ga0207641_10001173
410 Ga0207641_10027400
411 Ga0207676_10003219
412 Ga0207676_10074036
413 Ga0207683_10000758
414 Ga0268264_10000150
415 Ga0268264_10000664
416 Ga0307515_10000229
417 Ga0307515_10022037
418 Ga0265338_10023985
419 Ga0307512_10009763
420 Ga0265325_10010719
421 Ga0265340_10013226
422 Ga0265339_10009283
423 Ga0307513_10006905
424 Ga0307513_10052991
425 Ga0307508_10016352
426 Ga0307508_10055022
427 Ga0307516_10000185
428 Ga0373951_0000016
429 Ga0436364_0936746
430 Ga0436365_0876614
431 Ga0439463_003762
432 Ga0466969_0035484
433 Ga0466972_0047526
434 Ga0466965_0003156
435 Ga0466965_0005738
436 Ga0466966_0018536
437 Ga0466961_0001904
438 Ga0466961_0009641
439 Ga0466961_0017386
440 Ga0466961_0024694
441 Ga0466961_0025583
442 Ga0466961_0029023
443 Ga0466961_0036102
444 Ga0466961_0066122
445 Ga0466963_0004428
446 Ga0466963_0044665
447 Ga0466968_0028562
448 Ga0466970_0002406
449 Ga0466970_0006884
450 Ga0466970_0007625
451 Ga0466970_0008698
452 Ga0466970_0016090
453 Ga0466957_0048253
454 Ga0466960_0017235
455 Ga0466959_0079437
456 Ga0466958_0001433
457 Ga0466958_0008313
458 Ga0466958_0013684
459 Ga0466967_0015609
460 Ga0466967_0020615
461 Ga0466967_0083315
462 Ga0466967_0115019
463 Ga0495603_0025353
464 Ga0495629_0126392
465 Ga0495638_0007658
466 Ga0495638_0009062
467 Ga0495651_0000280
468 Ga0495594_0026989
469 Ga0495594_0029140
470 Ga0495606_0003316
471 Ga0495652_0001343
472 Ga0495645_0025609
473 Ga0495668_0000265
474 Ga0495668_0000407
475 Ga0495625_0001241
476 Ga0495589_0009885
477 Ga0495589_0027541
478 Ga0495676_0029804
479 Ga0495676_0038534
480 Ga0495675_0004687
481 Ga0495685_017310
482 Ga0495626_0000052
483 Ga0496102_0000235
484 Ga0496102_0023254
485 Ga0496103_0000443
486 Ga0496104_0002628
487 Ga0496105_0018806
488 Ga0496106_0042163
489 Ga0496108_0000078
490 Ga0496108_0003614
491 Ga0496108_0037690
492 Ga0496109_0001430
493 Ga0496109_0005790
494 Ga0496109_0021499
495 Ga0496111_0004243
496 Ga0496111_0029449
497 Ga0496112_0167138
498 Ga0496113_0004921
499 Ga0496113_0018100
500 Ga0496114_0078296
501 Ga0496116_0013993
502 Ga0496117_0000521
503 Ga0496118_0000455
504 Ga0496119_0003885
505 Ga0496121_0028582
506 Ga0496123_0077850
507 Ga0496125_0026603
508 Ga0496126_0005592
509 Ga0496126_0007214
510 Ga0501032_0029221
511 Ga0501034_0011204
512 Ga0501046_0000382
513 Ga0501047_0009791
514 Ga0501048_0007310
515 Ga0501070_0000918
516 Ga0501070_0001555
517 Ga0501070_0001589
518 Ga0501070_0002657
519 Ga0501070_0003127
520 Ga0501070_0089593
521 Ga0501073_0053426
522 Ga0501073_0063130
523 Ga0501074_0006813
524 Ga0501079_0000093
525 Ga0501080_0001736
526 Ga0501044_0016822
527 nmdc:mga03n38_11096_c1
528 nmdc:mga03n38_4010_c1
529 nmdc:mga00v17_24294_c1
530 nmdc:mga00v17_37160_c1
531 nmdc:mga0yw44_11884_c1
532 nmdc:mga0yw44_28987_c1
533 nmdc:mga0yw44_3076_c1
534 nmdc:mga05p37_78652_c1
535 nmdc:mga0qj67_2674_c1
536 nmdc:mga06r32_25384_c1
537 nmdc:mga0a205_13761_c1
538 Ga0500610_0035769
539 Ga0500643_003040
540 Ga0500644_0000204
541 Ga0500646_0000613
542 Ga0500652_006051
543 Ga0500616_0002001
544 Ga0500616_0043225
545 Ga0500645_000421
546 Ga0466962_0002533
547 Ga0530510_0091301
548 2862295483
549 2523383878
550 2566992560
551 2644016914
552 2644177956
553 2644228133
554 2644490587
555 2676486101
556 2738707233
557 2738887553
558 2739202717
559 2739236761
560 2739328548
561 2739366276
562 2740165617
563 2744954492
564 2753035764
565 2753326211
566 2785369507
567 2804847051
568 2811849054
569 2857484924
570 2862180164
571 2862579244
572 2867510507
573 2889305654
574 2902843231
575 2904541578
576 2904767431
577 2904774777
578 2908813082
579 2919423949
580 2919436599
581 2922560045
582 2928143065
583 2932401168
584 2935393407
585 2939743789
586 8025417695
587 8054612084
588 8056063487

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07287

AtuA

Acyclic terpene utilisation family protein AtuA

12

187

0.97

PF07287

AtuA

Acyclic terpene utilisation family protein AtuA

211

465

0.95

PF23544

502

601

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mgj-assembly1.cif.gz_B crystal structure of the saccharop_dh_n domain of mj1480 protein from methanococcus jannaschii. northeast structural genomics consortium target mjr83a. 0.6824 293 382
3mgj-assembly1.cif.gz_B crystal structure of the saccharop_dh_n domain of mj1480 protein from methanococcus jannaschii. northeast structural genomics consortium target mjr83a. 0.6443 293 382
3mgj-assembly1.cif.gz_A crystal structure of the saccharop_dh_n domain of mj1480 protein from methanococcus jannaschii. northeast structural genomics consortium target mjr83a. 0.6202 293 386
6juy-assembly1.cif.gz_D crystal structure of argz, apo structure, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.6188 291 371
2joq-assembly1.cif.gz_A solution structure of protein hp0495 from h. pylori; northeast structural genomics consortium target pt2; ontario centre for structural proteomics target hp0488 0.5954 294 382
ID Description Score Start End Superfamily
1y80A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin-binding domain 0.6611 16 93 3.40.50.280
af_O50380_15_186_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.6576 291 366 3.20.20.70
2k3iA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6503 291 374 3.30.70.860
af_P15920_27_842_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.6362 294 385 1.20.58.390
af_A0A0R4IN61_2_781_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.6321 294 382 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A3B0THY3-F1-model_v4 Terpene utilization protein AtuA 0.9853 444 551
AF-T1B009-F1-model_v4 Protein containing DUF1446 0.9851 17 99
AF-A0A378UX09-F1-model_v4 Exopolyphosphatase 0.9825 20 172
AF-A0A1H0V4I5-F1-model_v4 Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.9801 3 408
AF-A0A6G3V9F6-F1-model_v4 deleted 0.9787 451 551

Map