F391815

General Info

Members Datasets Scaffolds Average Seq Length
293 243 586 550

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2839993093|2839997708
Length 545
Sequence ADAIIIGAGLAGLVAATELTDAGKKVIILDQEPEQTLGGQAWRSFGGLFFVDSPEQRRLRIRDSHELALQDWMGSARFDREEDHWPRRWAEAYVDFAAGEKRSWLHAQGMRWFPVVGWAERGGSLATGHGNSVPRFHITWGTGLGVVEPFVRRAREAEESGLLAFRFRHRVTALATSAGALDTVDGEILQPSDVQRSEPSSRSVIGSFSLKAQAIIVCSGGIGGNHDLVRKNWPARLGKPKHLICGVPDHVDGLMLGVAQKAGAHLINEDRMWHYVEGVNNWNPIWTKHAIRILPGPSSLWFDALGNRMPAPCLPGFDTLSTLDHVMKSGFDYSWFVLNQTIVKKEFTLSGSEQNPDFTSKSWRQVLKRALGGVPAPVQAFLDNGEDFIVEKDFSELVRRMNALTGDNLIHAEKLKAQIIARDREIDNPYTKDAQITAIRGARNYIGDRLVRVVPPHKILDPRHGPLIAVRLNVLTRKSLGGIETDLSARVLKADGEPLPGIYAAGEAAGFGGGGMHGYNSLEGTFLGGCIFSGRTAGRAAAKAV

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
75 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
76 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
77 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
80 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
81 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
82 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
83 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
84 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
111 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
121 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
129 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
158 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
159 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
173 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
174 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
175 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
176 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
178 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
182 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
183 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
184 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
185 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
186 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
187 2643221548 Streptomyces sp. Root55 Isolate Unclassified
188 2643221578 Streptomyces sp. Root63 Isolate Unclassified
189 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
190 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
191 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
192 2643221670 Streptomyces sp. Root431 Isolate Unclassified
193 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
194 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
195 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
196 2643221736 Bosea sp. Root483D1 Isolate Unclassified
197 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
198 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
199 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
200 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
201 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
202 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
203 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
204 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
205 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
206 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
207 2851182111 Bosea sp. Tri-44 Isolate Nodule
208 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
209 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
210 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
211 2862574272 Streptomyces sp. AcE210 Isolate Nodule
212 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
213 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
214 2867475112 Streptomyces sp. TM32 Isolate Unclassified
215 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
216 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
217 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
218 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
219 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
220 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
221 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
222 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
223 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
224 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
225 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
226 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
227 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
228 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
229 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
230 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
231 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
232 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
233 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
234 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
235 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
236 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
237 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
238 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
239 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
240 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
241 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
242 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
243 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 78.5
Metatranscriptomes 0
Isolates 21.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.75
Nodule 1.37
Rhizoplane 2.39
Rhizosphere 78.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10103205 3300005293 Bacteria 3051
2 Ga0070680_100068419 3300005336 Bacteria 2915
3 Ga0070692_10010246 3300005345 Bacteria 4259
4 Ga0070668_100005825 3300005347 Bacteria 9143
5 Ga0070674_100043682 3300005356 Bacteria 3050
6 Ga0070673_100010103 3300005364 Bacteria 6371
7 Ga0070709_10029431 3300005434 Bacteria 3285
8 Ga0070708_100005647 3300005445 Bacteria 9915
9 Ga0070708_100089485 3300005445 Bacteria 2801
10 Ga0070662_100125498 3300005457 Bacteria 1972
11 Ga0070685_10002199 3300005466 Bacteria 10068
12 Ga0070685_10002724 3300005466 Bacteria 9050
13 Ga0070699_100001920 3300005518 Bacteria 18779
14 Ga0070697_100002859 3300005536 Bacteria 13275
15 Ga0068853_100075687 3300005539 Bacteria 2938
16 Ga0070695_100020568 3300005545 Bacteria 4029
17 Ga0070693_100001985 3300005547 Bacteria 9362
18 Ga0070704_100011880 3300005549 Bacteria 5360
19 Ga0068855_100058325 3300005563 Bacteria 4521
20 Ga0070702_100012157 3300005615 Bacteria 4303
21 Ga0068852_100017914 3300005616 Bacteria 5569
22 Ga0068861_100017242 3300005719 Bacteria 5122
23 Ga0081455_10000720 3300005937 Bacteria 42917
24 Ga0081540_1002156 3300005983 Bacteria 16348
25 Ga0070717_10009942 3300006028 Bacteria 7160
26 Ga0075428_100001802 3300006844 Bacteria 22929
27 Ga0075428_100045282 3300006844 Bacteria 4834
28 Ga0075430_100001417 3300006846 Bacteria 19498
29 Ga0075431_100001018 3300006847 Bacteria 24961
30 Ga0075431_100014459 3300006847 Bacteria 7984
31 Ga0075434_100055038 3300006871 Bacteria 3953
32 Ga0075429_100011776 3300006880 Bacteria 7583
33 Ga0075436_100011984 3300006914 Bacteria 5947
34 Ga0111539_10000200 3300009094 Bacteria 70531
35 Ga0111539_10057197 3300009094 Bacteria 4632
36 Ga0105247_10097987 3300009101 Bacteria 1871
37 Ga0114129_10000205 3300009147 Bacteria 65770
38 Ga0114129_10066407 3300009147 Bacteria 5032
39 Ga0114129_10195872 3300009147 Bacteria 2740
40 Ga0105238_10000003 3300009551 Bacteria 422077
41 Ga0105238_10011883 3300009551 Bacteria 8771
42 Ga0105249_10002813 3300009553 Bacteria 15020
43 Ga0105239_10134316 3300010375 Bacteria 2754
44 Ga0105246_10067687 3300011119 Bacteria 2503
45 Ga0157371_10074565 3300013102 Bacteria 2403
46 Ga0157369_10042015 3300013105 Bacteria 4989
47 Ga0157374_10047413 3300013296 Bacteria 3984
48 Ga0163162_10009588 3300013306 Bacteria 9419
49 Ga0157372_10132998 3300013307 Bacteria 2863
50 Ga0157375_10052856 3300013308 Bacteria 3995
51 Ga0163163_10235141 3300014325 Bacteria 1882
52 Ga0157379_10053584 3300014968 Bacteria 3604
53 Ga0163161_10003744 3300017792 Bacteria 10654
54 Ga0209758_1008332 3300025297 Bacteria 6753
55 Ga0207426_1001651 3300025302 Bacteria 17358
56 Ga0207426_1018661 3300025302 Bacteria 2440
57 Ga0207426_1023378 3300025302 Bacteria 2109
58 Ga0207684_10003019 3300025910 Bacteria 16676
59 Ga0207693_10003566 3300025915 Bacteria 13298
60 Ga0207657_10066234 3300025919 Bacteria 3075
61 Ga0207646_10014152 3300025922 Bacteria 7586
62 Ga0207694_10000020 3300025924 Bacteria 310240
63 Ga0207644_10099931 3300025931 Bacteria 2178
64 Ga0207706_10153911 3300025933 Bacteria 2023
65 Ga0207709_10025505 3300025935 Bacteria 3385
66 Ga0207689_10046927 3300025942 Bacteria 3568
67 Ga0207667_10055476 3300025949 Bacteria 4165
68 Ga0207712_10003968 3300025961 Bacteria 9345
69 Ga0207668_10007189 3300025972 Bacteria 6612
70 Ga0207639_10059828 3300026041 Bacteria 2937
71 Ga0207678_10134933 3300026067 Bacteria 2106
72 Ga0207641_10149021 3300026088 Bacteria 2118
73 Ga0207675_100009170 3300026118 Bacteria 9282
74 Ga0207683_10029353 3300026121 Bacteria 4761
75 Ga0207428_10001692 3300027907 Bacteria 22664
76 Ga0268265_10021108 3300028380 Bacteria 4556
77 Ga0268264_10019924 3300028381 Bacteria 5481
78 Ga0307517_10028022 3300028786 Bacteria 6738
79 Ga0307515_10035257 3300028794 Bacteria 8147
80 Ga0307508_10027257 3300031616 Bacteria 5173
81 Ga0307508_10145648 3300031616 Bacteria 1972
82 Ga0307516_10094044 3300031730 Bacteria 2822
83 Ga0307413_10001220 3300031824 Bacteria 9530
84 Ga0307409_100005715 3300031995 Bacteria 7209
85 Ga0307510_10110931 3300033180 Bacteria 2486
86 Ga0373959_0000338 3300034820 Bacteria 9563
87 Ga0373932_0020318 3300035112 Bacteria 1740
88 Ga0373931_0000582 3300035691 Bacteria 15085
89 Ga0395901_0015168 3300038443 Bacteria 7836
90 Ga0439436_0002008 3300041404 Bacteria 6044
91 Ga0451853_0607510 3300041512 Bacteria 4165
92 Ga0439457_000151 3300042014 Bacteria 17856
93 Ga0450894_000348 3300042131 Bacteria 8155
94 Ga0450898_000998 3300042134 Bacteria 3584
95 Ga0450899_001578 3300042135 Bacteria 2529
96 Ga0466969_0005476 3300044656 Bacteria 6753
97 Ga0466972_0008105 3300044658 Bacteria 5267
98 Ga0466972_0078414 3300044658 Bacteria 1573
99 Ga0466966_0000935 3300044684 Bacteria 18627
100 Ga0466961_0009047 3300044693 Bacteria 6353
101 Ga0466963_0000169 3300044694 Bacteria 26738
102 Ga0466963_0029936 3300044694 Bacteria 3508
103 Ga0466964_0002861 3300044706 Bacteria 6223
104 Ga0466968_0002983 3300044735 Bacteria 6250
105 Ga0466970_0002866 3300044765 Bacteria 8339
106 Ga0466967_0004942 3300045976 Bacteria 9119
107 Ga0495617_012012 3300046452 Bacteria 2953
108 Ga0495627_036920 3300046453 Bacteria 1517
109 Ga0495592_0005819 3300046454 Bacteria 9141
110 Ga0495592_0011313 3300046454 Bacteria 6749
111 Ga0495603_0000404 3300046455 Bacteria 23775
112 Ga0495603_0033645 3300046455 Bacteria 3084
113 Ga0495629_0012106 3300046459 Bacteria 6254
114 Ga0495629_0044780 3300046459 Bacteria 3105
115 Ga0495638_0082475 3300046460 Bacteria 1950
116 Ga0495651_0109065 3300046462 Bacteria 2049
117 Ga0495582_0039834 3300046473 Bacteria 2587
118 Ga0495585_0013219 3300046492 Bacteria 4836
119 Ga0495585_0075422 3300046492 Bacteria 1833
120 Ga0495594_0014752 3300046499 Bacteria 4101
121 Ga0495594_0080231 3300046499 Bacteria 1822
122 Ga0495608_0036342 3300046511 Bacteria 3317
123 Ga0495618_0110011 3300046514 Bacteria 1764
124 Ga0495631_0003284 3300046518 Bacteria 8892
125 Ga0495643_0000003 3300046522 Bacteria 571962
126 Ga0495643_0010303 3300046522 Bacteria 5757
127 Ga0495666_0016784 3300046526 Bacteria 3645
128 Ga0495666_0057140 3300046526 Bacteria 1868
129 Ga0495640_0015562 3300046533 Bacteria 5721
130 Ga0495640_0028085 3300046533 Bacteria 4053
131 Ga0495640_0067353 3300046533 Bacteria 2411
132 Ga0495609_0022922 3300046538 Bacteria 2875
133 Ga0495597_0017269 3300046542 Bacteria 3399
134 Ga0495622_0006439 3300046557 Bacteria 5445
135 Ga0495633_0022548 3300046558 Bacteria 3132
136 Ga0495667_0042697 3300046559 Bacteria 3007
137 Ga0495668_0009124 3300046616 Bacteria 6115
138 Ga0495625_0114433 3300046660 Bacteria 1841
139 Ga0495625_0115593 3300046660 Bacteria 1831
140 Ga0495661_0037460 3300046665 Bacteria 3028
141 Ga0495657_0001088 3300046675 Bacteria 23837
142 Ga0495657_0022450 3300046675 Bacteria 4518
143 Ga0495613_0044607 3300046689 Bacteria 3279
144 Ga0495613_0055693 3300046689 Bacteria 2904
145 Ga0495613_0068072 3300046689 Bacteria 2597
146 Ga0495624_0087726 3300046690 Bacteria 1921
147 Ga0495589_0022040 3300046794 Bacteria 3253
148 Ga0495589_0025420 3300046794 Bacteria 3005
149 Ga0495604_0003262 3300047317 Bacteria 12967
150 Ga0495604_0008925 3300047317 Bacteria 7924
151 Ga0495636_0002168 3300047318 Bacteria 7530
152 Ga0495636_0005842 3300047318 Bacteria 4826
153 Ga0495636_0018683 3300047318 Bacteria 2782
154 Ga0495674_0079808 3300047319 Bacteria 2809
155 Ga0495676_0035217 3300047321 Bacteria 4189
156 Ga0495676_0085989 3300047321 Bacteria 2368
157 Ga0495680_0021069 3300047322 Bacteria 5462
158 Ga0495687_000423 3300047443 Bacteria 52313
159 Ga0495679_023922 3300047446 Bacteria 2065
160 Ga0495685_000896 3300047447 Bacteria 9089
161 Ga0495685_007601 3300047447 Bacteria 3584
162 Ga0495681_0008305 3300047470 Bacteria 6522
163 Ga0495681_0047667 3300047470 Bacteria 2037
164 Ga0495593_0007482 3300047673 Bacteria 6386
165 Ga0495626_0012263 3300048091 Bacteria 4500
166 Ga0496104_0114701 3300048907 Bacteria 2584
167 Ga0496105_0101219 3300048908 Bacteria 2379
168 Ga0496107_0018885 3300048910 Bacteria 4860
169 Ga0496113_0055454 3300048916 Bacteria 2971
170 Ga0496113_0185703 3300048916 Bacteria 1649
171 Ga0496115_0051726 3300048918 Bacteria 3293
172 Ga0496117_0000346 3300048920 Bacteria 81937
173 Ga0496118_0003448 3300048921 Bacteria 19906
174 Ga0496122_0006062 3300048925 Bacteria 14087
175 Ga0496123_0011584 3300048926 Bacteria 7624
176 Ga0501032_0014314 3300049569 Bacteria 5618
177 Ga0501033_0082904 3300049570 Bacteria 2351
178 Ga0501036_0022151 3300049572 Bacteria 5344
179 Ga0501036_0078150 3300049572 Bacteria 2799
180 Ga0501036_0130361 3300049572 Bacteria 2123
181 Ga0501037_0010479 3300049573 Bacteria 6808
182 Ga0501038_0046046 3300049574 Bacteria 3783
183 Ga0501038_0068377 3300049574 Bacteria 3019
184 Ga0501038_0089282 3300049574 Bacteria 2585
185 Ga0501039_0141817 3300049575 Bacteria 1887
186 Ga0501041_0025876 3300049577 Bacteria 3528
187 Ga0501043_0016203 3300049579 Bacteria 5846
188 Ga0501043_0148819 3300049579 Bacteria 1832
189 Ga0501046_0046471 3300049580 Bacteria 3446
190 Ga0501046_0054854 3300049580 Bacteria 3133
191 Ga0501047_0000048 3300049581 Bacteria 167850
192 Ga0501047_0023053 3300049581 Bacteria 5976
193 Ga0501047_0024647 3300049581 Bacteria 5774
194 Ga0501047_0039572 3300049581 Bacteria 4560
195 Ga0501047_0047800 3300049581 Bacteria 4133
196 Ga0501048_0004535 3300049582 Bacteria 10574
197 Ga0501048_0021284 3300049582 Bacteria 4748
198 Ga0501068_0003741 3300049584 Bacteria 8231
199 Ga0501071_0010978 3300049587 Bacteria 6081
200 Ga0501072_0132302 3300049588 Bacteria 1988
201 Ga0501223_009921 3300049663 Bacteria 1922
202 Ga0501235_004584 3300049669 Bacteria 2986
203 Ga0501249_000577 3300049679 Bacteria 8709
204 Ga0501221_000959 3300049704 Bacteria 4722
205 Ga0501079_0022991 3300049741 Bacteria 4787
206 Ga0501083_0003319 3300049744 Bacteria 11244
207 Ga0501268_000455 3300049765 Bacteria 4436
208 Ga0501044_0019104 3300049823 Bacteria 7337
209 Ga0501044_0046292 3300049823 Bacteria 4505
210 Ga0501045_0039878 3300049824 Bacteria 3417
211 nmdc:mga05p37_146_c1 3300050507 Bacteria 27217
212 nmdc:mga05p37_267615_c1 3300050507 Bacteria 2043
213 nmdc:mga05p37_3943_c1 3300050507 Bacteria 17382
214 nmdc:mga09592_1356_c1 3300050508 Bacteria 19564
215 nmdc:mga09592_22685_c1 3300050508 Bacteria 5180
216 nmdc:mga0qj67_58931_c1 3300050509 Bacteria 3045
217 nmdc:mga06r32_347_c1 3300050510 Bacteria 38541
218 nmdc:mga06r32_48574_c1 3300050510 Bacteria 4057
219 nmdc:mga08y16_328_c1 3300050511 Bacteria 33166
220 nmdc:mga0rr50_33770_c1 3300050513 Bacteria 3658
221 nmdc:mga0a205_7927_c1 3300050515 Bacteria 9645
222 Ga0500560_023074 3300053107 Bacteria 1800
223 Ga0500628_002875 3300053129 Bacteria 2830
224 Ga0500658_0001344 3300053134 Bacteria 9954
225 Ga0500561_0003404 3300053137 Bacteria 2778
226 Ga0500634_0004748 3300053161 Bacteria 6350
227 Ga0500645_012628 3300053730 Bacteria 2728
228 Ga0500587_004248 3300053739 Bacteria 1974
229 Ga0501084_0038695 3300054114 Bacteria 3987
230 Ga0501082_0002774 3300060353 Bacteria 15303
231 2839997708 2839993093 Bacteria 5512535
232 2511388358 2511231027 Bacteria 5013807
233 2554259362 2554235005 Bacteria 6457341
234 2585296812 2582581312 Bacteria 7308206
235 2616695864 2616644814 Bacteria 11555299
236 2616900583 2616644941 Bacteria 8510691
237 2643759984 2643221548 Bacteria 8053412
238 2643904680 2643221578 Bacteria 9213798
239 2643946362 2643221587 Bacteria 7586415
240 2644014028 2643221601 Bacteria 7493239
241 2644174410 2643221631 Bacteria 8168043
242 2644389293 2643221670 Bacteria 6497041
243 2644406054 2643221673 Bacteria 9196637
244 2644434166 2643221677 Bacteria 7584031
245 2644460320 2643221682 Bacteria 6743283
246 2644744793 2643221736 Bacteria 6608466
247 2768644950 2767802112 Bacteria 6465194
248 2785345513 2784746763 Bacteria 9783172
249 2793983705 2791355406 Bacteria 11364898
250 2804843990 2802429296 Bacteria 7227771
251 2811847160 2808606982 Bacteria 7791042
252 2819428293 2818991318 Bacteria 5266538
253 2819664658 2818991458 Bacteria 4794049
254 2819696603 2818991463 Bacteria 7948711
255 2819743465 2818991472 Bacteria 10089953
256 2842872940 2842871566 Bacteria 4827117
257 2851182181 2851182111 Bacteria 6047226
258 2862180481 2862178590 Bacteria 8583590
259 2862294376 2862290372 Bacteria 7471434
260 2862389619 2862382967 Bacteria 10317375
261 2862583479 2862574272 Bacteria 10567477
262 2862708502 2862705112 Bacteria 6563286
263 2863406769 2863404153 Bacteria 9672205
264 2867479956 2867475112 Bacteria 6909112
265 2873157486 2873151551 Bacteria 8625867
266 2875392879 2875391855 Bacteria 7600475
267 2912759078 2912757875 Bacteria 7940295
268 2918502711 2918501144 Bacteria 8668083
269 2928524387 2928521798 Bacteria 4960112
270 2935395850 2935390628 Bacteria 7043367
271 2946051824 2946045630 Bacteria 8527308
272 2954015336 2954011201 Bacteria 4762601
273 2966604195 2966598605 Bacteria 7676064
274 2990047144 2990044586 Bacteria 6603797
275 2990062708 2990059506 Bacteria 9321252
276 2990094469 2990088156 Bacteria 6657676
277 2997454122 2997451912 Bacteria 8492419
278 2997601834 2997600082 Bacteria 9896405
279 3006324264 3006321560 Bacteria 8247479
280 3006429392 3006425503 Bacteria 6491253
281 3006493541 3006486233 Bacteria 8157040
282 8008486788 8008485437 Bacteria 7198341
283 8008561539 8008558824 Bacteria 10610750
284 8025419520 8025413630 Bacteria 7014048
285 8025525922 8025524527 Bacteria 7197316
286 8025530881 8025530807 Bacteria 8495698
287 8033690066 8033684223 Bacteria 6906479
288 8047900081 8047893842 Bacteria 11723082
289 8048131134 8048127548 Bacteria 11053136
290 8048358847 8048356638 Bacteria 11044339
291 8048377028 8048369669 Bacteria 11666822
292 8048386083 8048379754 Bacteria 11877923
293 8048412113 8048406513 Bacteria 8936924
294 Ga0065715_10103205
295 Ga0070680_100068419
296 Ga0070692_10010246
297 Ga0070668_100005825
298 Ga0070674_100043682
299 Ga0070673_100010103
300 Ga0070709_10029431
301 Ga0070708_100005647
302 Ga0070708_100089485
303 Ga0070662_100125498
304 Ga0070685_10002199
305 Ga0070685_10002724
306 Ga0070699_100001920
307 Ga0070697_100002859
308 Ga0068853_100075687
309 Ga0070695_100020568
310 Ga0070693_100001985
311 Ga0070704_100011880
312 Ga0068855_100058325
313 Ga0070702_100012157
314 Ga0068852_100017914
315 Ga0068861_100017242
316 Ga0081455_10000720
317 Ga0081540_1002156
318 Ga0070717_10009942
319 Ga0075428_100001802
320 Ga0075428_100045282
321 Ga0075430_100001417
322 Ga0075431_100001018
323 Ga0075431_100014459
324 Ga0075434_100055038
325 Ga0075429_100011776
326 Ga0075436_100011984
327 Ga0111539_10000200
328 Ga0111539_10057197
329 Ga0105247_10097987
330 Ga0114129_10000205
331 Ga0114129_10066407
332 Ga0114129_10195872
333 Ga0105238_10000003
334 Ga0105238_10011883
335 Ga0105249_10002813
336 Ga0105239_10134316
337 Ga0105246_10067687
338 Ga0157371_10074565
339 Ga0157369_10042015
340 Ga0157374_10047413
341 Ga0163162_10009588
342 Ga0157372_10132998
343 Ga0157375_10052856
344 Ga0163163_10235141
345 Ga0157379_10053584
346 Ga0163161_10003744
347 Ga0209758_1008332
348 Ga0207426_1001651
349 Ga0207426_1018661
350 Ga0207426_1023378
351 Ga0207684_10003019
352 Ga0207693_10003566
353 Ga0207657_10066234
354 Ga0207646_10014152
355 Ga0207694_10000020
356 Ga0207644_10099931
357 Ga0207706_10153911
358 Ga0207709_10025505
359 Ga0207689_10046927
360 Ga0207667_10055476
361 Ga0207712_10003968
362 Ga0207668_10007189
363 Ga0207639_10059828
364 Ga0207678_10134933
365 Ga0207641_10149021
366 Ga0207675_100009170
367 Ga0207683_10029353
368 Ga0207428_10001692
369 Ga0268265_10021108
370 Ga0268264_10019924
371 Ga0307517_10028022
372 Ga0307515_10035257
373 Ga0307508_10027257
374 Ga0307508_10145648
375 Ga0307516_10094044
376 Ga0307413_10001220
377 Ga0307409_100005715
378 Ga0307510_10110931
379 Ga0373959_0000338
380 Ga0373932_0020318
381 Ga0373931_0000582
382 Ga0395901_0015168
383 Ga0439436_0002008
384 Ga0451853_0607510
385 Ga0439457_000151
386 Ga0450894_000348
387 Ga0450898_000998
388 Ga0450899_001578
389 Ga0466969_0005476
390 Ga0466972_0008105
391 Ga0466972_0078414
392 Ga0466966_0000935
393 Ga0466961_0009047
394 Ga0466963_0000169
395 Ga0466963_0029936
396 Ga0466964_0002861
397 Ga0466968_0002983
398 Ga0466970_0002866
399 Ga0466967_0004942
400 Ga0495617_012012
401 Ga0495627_036920
402 Ga0495592_0005819
403 Ga0495592_0011313
404 Ga0495603_0000404
405 Ga0495603_0033645
406 Ga0495629_0012106
407 Ga0495629_0044780
408 Ga0495638_0082475
409 Ga0495651_0109065
410 Ga0495582_0039834
411 Ga0495585_0013219
412 Ga0495585_0075422
413 Ga0495594_0014752
414 Ga0495594_0080231
415 Ga0495608_0036342
416 Ga0495618_0110011
417 Ga0495631_0003284
418 Ga0495643_0000003
419 Ga0495643_0010303
420 Ga0495666_0016784
421 Ga0495666_0057140
422 Ga0495640_0015562
423 Ga0495640_0028085
424 Ga0495640_0067353
425 Ga0495609_0022922
426 Ga0495597_0017269
427 Ga0495622_0006439
428 Ga0495633_0022548
429 Ga0495667_0042697
430 Ga0495668_0009124
431 Ga0495625_0114433
432 Ga0495625_0115593
433 Ga0495661_0037460
434 Ga0495657_0001088
435 Ga0495657_0022450
436 Ga0495613_0044607
437 Ga0495613_0055693
438 Ga0495613_0068072
439 Ga0495624_0087726
440 Ga0495589_0022040
441 Ga0495589_0025420
442 Ga0495604_0003262
443 Ga0495604_0008925
444 Ga0495636_0002168
445 Ga0495636_0005842
446 Ga0495636_0018683
447 Ga0495674_0079808
448 Ga0495676_0035217
449 Ga0495676_0085989
450 Ga0495680_0021069
451 Ga0495687_000423
452 Ga0495679_023922
453 Ga0495685_000896
454 Ga0495685_007601
455 Ga0495681_0008305
456 Ga0495681_0047667
457 Ga0495593_0007482
458 Ga0495626_0012263
459 Ga0496104_0114701
460 Ga0496105_0101219
461 Ga0496107_0018885
462 Ga0496113_0055454
463 Ga0496113_0185703
464 Ga0496115_0051726
465 Ga0496117_0000346
466 Ga0496118_0003448
467 Ga0496122_0006062
468 Ga0496123_0011584
469 Ga0501032_0014314
470 Ga0501033_0082904
471 Ga0501036_0022151
472 Ga0501036_0078150
473 Ga0501036_0130361
474 Ga0501037_0010479
475 Ga0501038_0046046
476 Ga0501038_0068377
477 Ga0501038_0089282
478 Ga0501039_0141817
479 Ga0501041_0025876
480 Ga0501043_0016203
481 Ga0501043_0148819
482 Ga0501046_0046471
483 Ga0501046_0054854
484 Ga0501047_0000048
485 Ga0501047_0023053
486 Ga0501047_0024647
487 Ga0501047_0039572
488 Ga0501047_0047800
489 Ga0501048_0004535
490 Ga0501048_0021284
491 Ga0501068_0003741
492 Ga0501071_0010978
493 Ga0501072_0132302
494 Ga0501223_009921
495 Ga0501235_004584
496 Ga0501249_000577
497 Ga0501221_000959
498 Ga0501079_0022991
499 Ga0501083_0003319
500 Ga0501268_000455
501 Ga0501044_0019104
502 Ga0501044_0046292
503 Ga0501045_0039878
504 nmdc:mga05p37_146_c1
505 nmdc:mga05p37_267615_c1
506 nmdc:mga05p37_3943_c1
507 nmdc:mga09592_1356_c1
508 nmdc:mga09592_22685_c1
509 nmdc:mga0qj67_58931_c1
510 nmdc:mga06r32_347_c1
511 nmdc:mga06r32_48574_c1
512 nmdc:mga08y16_328_c1
513 nmdc:mga0rr50_33770_c1
514 nmdc:mga0a205_7927_c1
515 Ga0500560_023074
516 Ga0500628_002875
517 Ga0500658_0001344
518 Ga0500561_0003404
519 Ga0500634_0004748
520 Ga0500645_012628
521 Ga0500587_004248
522 Ga0501084_0038695
523 Ga0501082_0002774
524 2839997708
525 2511388358
526 2554259362
527 2585296812
528 2616695864
529 2616900583
530 2643759984
531 2643904680
532 2643946362
533 2644014028
534 2644174410
535 2644389293
536 2644406054
537 2644434166
538 2644460320
539 2644744793
540 2768644950
541 2785345513
542 2793983705
543 2804843990
544 2811847160
545 2819428293
546 2819664658
547 2819696603
548 2819743465
549 2842872940
550 2851182181
551 2862180481
552 2862294376
553 2862389619
554 2862583479
555 2862708502
556 2863406769
557 2867479956
558 2873157486
559 2875392879
560 2912759078
561 2918502711
562 2928524387
563 2935395850
564 2946051824
565 2954015336
566 2966604195
567 2990047144
568 2990062708
569 2990094469
570 2997454122
571 2997601834
572 3006324264
573 3006429392
574 3006493541
575 8008486788
576 8008561539
577 8025419520
578 8025525922
579 8025530881
580 8033690066
581 8047900081
582 8048131134
583 8048358847
584 8048377028
585 8048386083
586 8048412113

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

2

527

0.92

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

5

44

0.91

PF01494

FAD_binding_3

FAD binding domain

1

43

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9798 8 35
7o4t-assembly1.cif.gz_A structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme with coenzyme a bound at the hydratase, thiolase active sites and possible additional binding site (coa(ech/had)) 0.9781 8 37
4j0e-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 0.9776 8 37
4oqy-assembly1.cif.gz_B streptomyces sp. gf3546 imine reductase 0.9768 7 34
2hdh-assembly1.cif.gz_B biochemical characterization and structure determination of human heart short chain l-3-hydroxyacyl coa dehydrogenase provide insight into catalytic mechanism 0.9705 7 36
ID Description Score Start End Superfamily
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.999 8 36 3.40.50.720
4b3jB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9806 8 37 3.40.50.720
4oqyB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9768 7 34 3.40.50.720
3llvA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9681 6 39 3.40.50.720
2hdhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9651 7 36 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A530BYK8-F1-model_v4 FAD-dependent oxidoreductase 0.9718 6 117 GO:0016627
AF-A0A7X7PDP5-F1-model_v4 FAD-binding dehydrogenase 0.9701 149 550 GO:0016627
AF-A0A434SUF2-F1-model_v4 FAD-binding dehydrogenase 0.9699 6 552 GO:0016627
AF-A0A2N0QI48-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavo protein 0.9698 278 493 GO:0016627
AF-A0A318T2E7-F1-model_v4 FAD-dependent oxidoreductase 2 FAD binding domain-containing protein 0.9696 5 549 GO:0016627

Map