F391646

General Info

Members Datasets Scaffolds Average Seq Length
293 154 291 297

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000214|Ga0451576_0000214_17411_18430
Length 339
Sequence LRENPARQRHRAARAPGLAGPPENPLVIRGVSYALRVAHFPMETQRKPSWLRAKLPGGPGFTATRQLVDHNHLHTVCQSAQCPNLGECWARGTATVMILGNICTRSCNFCAIATGRPTELDLGEPARVADAVARMNLRHCVVTSVARDELADGGAGVWAATIRAIRHRNPRTAIEVLVPDFKGNTAHIDLVLDAKPDIFNHNVETVERLQKPVRVQARYDRSRGVLRHAKSRGFTTKTGIMLGLGETEAEIEQTLRDIASDKTDIVTIGQYLQPTAQHLPVARWAPPEEFAHWKQFGLSIGLGVVESGPLVRSSYHADEQSRKYTGDDHLNTQNALASA

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
3 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
67 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
68 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
69 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
98 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
139 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0
Isolates 1.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.68
Rhizosphere 97.27
Stem 0
Stem Tuber 0
Unclassified 2.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_1788733 2162886011 Bacteria 1589
2 rootH2_10012478 3300003320 Bacteria 8635
3 rootH1_10009474 3300003316 Bacteria 4282
4 rootH1_10009474 3300003323 Bacteria 5453
5 rootH1_10073915 3300003323 Bacteria 7020
6 Ga0065712_10072190 3300005290 Bacteria 4865
7 Ga0070683_100183047 3300005329 Bacteria 1989
8 Ga0070670_100002856 3300005331 Bacteria 14284
9 Ga0068869_100000032 3300005334 Bacteria 58379
10 Ga0070680_100481007 3300005336 Bacteria 1061
11 Ga0068868_100000800 3300005338 Bacteria 21303
12 Ga0070661_100016606 3300005344 Bacteria 5207
13 Ga0070675_100017464 3300005354 Bacteria 5701
14 Ga0070667_100014176 3300005367 Bacteria 6584
15 Ga0070714_100010198 3300005435 Bacteria 7418
16 Ga0068867_100001662 3300005459 Bacteria 15489
17 Ga0070679_100013974 3300005530 Bacteria 7695
18 Ga0070684_100095740 3300005535 Unclassified 2646
19 Ga0070672_100000416 3300005543 Bacteria 24708
20 Ga0070665_100459628 3300005548 Bacteria 1283
21 Ga0068856_100003018 3300005614 Bacteria 17240
22 Ga0068856_100763208 3300005614 Bacteria 987
23 Ga0068859_100310729 3300005617 Unclassified 1670
24 Ga0068864_100119365 3300005618 Bacteria 2356
25 Ga0068866_10031069 3300005718 Bacteria 2569
26 Ga0068863_100004289 3300005841 Bacteria 14042
27 Ga0068863_100158957 3300005841 Unclassified 2164
28 Ga0068858_100035417 3300005842 Bacteria 4630
29 Ga0068858_100115403 3300005842 Bacteria 2509
30 Ga0070717_10000018 3300006028 Bacteria 195516
31 Ga0070717_10004623 3300006028 Bacteria 9973
32 Ga0097621_100003049 3300006237 Bacteria 11495
33 Ga0068871_100002955 3300006358 Bacteria 11667
34 Ga0068871_100007314 3300006358 Bacteria 7881
35 Ga0068871_100418016 3300006358 Bacteria 1197
36 Ga0075428_100000803 3300006844 Bacteria 32791
37 Ga0075433_10019285 3300006852 Bacteria 5681
38 Ga0075434_100026442 3300006871 Bacteria 5684
39 Ga0075434_100056639 3300006871 Bacteria 3896
40 Ga0075434_100713407 3300006871 Bacteria 1020
41 Ga0068865_100001562 3300006881 Bacteria 13389
42 Ga0097620_100310724 3300006931 Unclassified 1670
43 Ga0099794_10109213 3300007265 Unclassified 1385
44 Ga0105240_10063662 3300009093 Bacteria 4586
45 Ga0114129_10000063 3300009147 Bacteria 96268
46 Ga0114129_10026628 3300009147 Bacteria 8189
47 Ga0114129_10092938 3300009147 Bacteria 4179
48 Ga0114129_10376565 3300009147 Bacteria 1875
49 Ga0105243_10703570 3300009148 Bacteria 985
50 Ga0105248_10019763 3300009177 Bacteria 7458
51 Ga0105248_10309793 3300009177 Bacteria 1778
52 Ga0105239_10024936 3300010375 Bacteria 6587
53 Ga0163162_10007450 3300013306 Bacteria 10644
54 Ga0157375_10007813 3300013308 Bacteria 9359
55 Ga0157375_10164305 3300013308 Bacteria 2364
56 Ga0163163_10009845 3300014325 Bacteria 8565
57 Ga0207680_10032712 3300025903 Unclassified 2959
58 Ga0207649_10010072 3300025920 Bacteria 5186
59 Ga0207652_10009895 3300025921 Bacteria 7671
60 Ga0207650_10002505 3300025925 Bacteria 12753
61 Ga0207659_10351192 3300025926 Bacteria 1224
62 Ga0207664_10000859 3300025929 Bacteria 20553
63 Ga0207704_10025752 3300025938 Bacteria 3215
64 Ga0207691_10003943 3300025940 Bacteria 14415
65 Ga0207711_10006927 3300025941 Bacteria 9515
66 Ga0207689_10000640 3300025942 Bacteria 33433
67 Ga0207661_10006456 3300025944 Bacteria 8292
68 Ga0207679_10004521 3300025945 Bacteria 8662
69 Ga0207677_10000935 3300026023 Bacteria 16341
70 Ga0207703_10440643 3300026035 Unclassified 1215
71 Ga0207702_10023295 3300026078 Bacteria 5134
72 Ga0207641_10001664 3300026088 Bacteria 21678
73 Ga0207641_10363926 3300026088 Unclassified 1381
74 Ga0207648_10001776 3300026089 Bacteria 23622
75 Ga0207676_10356398 3300026095 Unclassified 1354
76 Ga0207674_10100085 3300026116 Bacteria 2880
77 Ga0207683_10372301 3300026121 Unclassified 1312
78 Ga0265337_1012260 3300028556 Bacteria 2920
79 Ga0265337_1024175 3300028556 Bacteria 1861
80 Ga0265319_1000398 3300028563 Bacteria 31610
81 Ga0265319_1000811 3300028563 Bacteria 19983
82 Ga0265319_1000931 3300028563 Bacteria 18319
83 Ga0265319_1001954 3300028563 Bacteria 11669
84 Ga0265319_1004700 3300028563 Bacteria 6696
85 Ga0265319_1005381 3300028563 Bacteria 6132
86 Ga0265319_1008804 3300028563 Bacteria 4376
87 Ga0265319_1009228 3300028563 Bacteria 4225
88 Ga0265319_1015762 3300028563 Bacteria 2917
89 Ga0265319_1020958 3300028563 Bacteria 2409
90 Ga0265334_10006004 3300028573 Bacteria 5274
91 Ga0265334_10031336 3300028573 Bacteria 2125
92 Ga0265318_10000356 3300028577 Bacteria 36349
93 Ga0265318_10000538 3300028577 Bacteria 27049
94 Ga0265318_10001258 3300028577 Bacteria 15325
95 Ga0265318_10002812 3300028577 Bacteria 9094
96 Ga0265318_10025784 3300028577 Bacteria 2317
97 Ga0265318_10041678 3300028577 Bacteria 1744
98 Ga0265318_10043521 3300028577 Bacteria 1701
99 Ga0265323_10000087 3300028653 Bacteria 53098
100 Ga0265323_10000260 3300028653 Bacteria 30902
101 Ga0265323_10003378 3300028653 Bacteria 7067
102 Ga0265323_10011762 3300028653 Bacteria 3523
103 Ga0265323_10026774 3300028653 Bacteria 2171
104 Ga0265323_10073018 3300028653 Bacteria 1170
105 Ga0265322_10001104 3300028654 Bacteria 9332
106 Ga0265322_10015028 3300028654 Bacteria 2238
107 Ga0265336_10012422 3300028666 Bacteria 2867
108 Ga0265338_10000619 3300028800 Bacteria 61997
109 Ga0265338_10001341 3300028800 Bacteria 40147
110 Ga0265338_10012783 3300028800 Bacteria 9547
111 Ga0265338_10198079 3300028800 Bacteria 1517
112 Ga0265324_10000015 3300029957 Bacteria 188550
113 Ga0265324_10003090 3300029957 Bacteria 8116
114 Ga0265324_10003307 3300029957 Bacteria 7747
115 Ga0265330_10004188 3300031235 Bacteria 7358
116 Ga0265330_10010184 3300031235 Bacteria 4439
117 Ga0265330_10015232 3300031235 Bacteria 3558
118 Ga0265330_10047324 3300031235 Bacteria 1893
119 Ga0265332_10043288 3300031238 Bacteria 1944
120 Ga0265332_10091101 3300031238 Bacteria 1289
121 Ga0265332_10119978 3300031238 Bacteria 1105
122 Ga0265328_10015926 3300031239 Bacteria 2936
123 Ga0265320_10000008 3300031240 Bacteria 296209
124 Ga0265320_10000415 3300031240 Bacteria 33862
125 Ga0265320_10000627 3300031240 Bacteria 27062
126 Ga0265320_10001257 3300031240 Bacteria 18587
127 Ga0265320_10003098 3300031240 Bacteria 11283
128 Ga0265320_10003559 3300031240 Bacteria 10418
129 Ga0265320_10014016 3300031240 Bacteria 4588
130 Ga0265320_10017490 3300031240 Bacteria 3978
131 Ga0265320_10090334 3300031240 Bacteria 1419
132 Ga0265320_10107699 3300031240 Bacteria 1279
133 Ga0265325_10013545 3300031241 Bacteria 4637
134 Ga0265325_10032943 3300031241 Bacteria 2764
135 Ga0265325_10077377 3300031241 Bacteria 1658
136 Ga0265329_10043241 3300031242 Bacteria 1441
137 Ga0265340_10070547 3300031247 Bacteria 1657
138 Ga0265339_10017844 3300031249 Bacteria 4195
139 Ga0265339_10071251 3300031249 Bacteria 1852
140 Ga0265339_10103708 3300031249 Bacteria 1477
141 Ga0265331_10003602 3300031250 Bacteria 9924
142 Ga0265331_10022937 3300031250 Bacteria 3178
143 Ga0265327_10000325 3300031251 Bacteria 90949
144 Ga0265327_10001875 3300031251 Bacteria 24315
145 Ga0265327_10002702 3300031251 Bacteria 18194
146 Ga0265327_10012318 3300031251 Bacteria 5785
147 Ga0265316_10013966 3300031344 Bacteria 7102
148 Ga0265316_10014564 3300031344 Bacteria 6913
149 Ga0265316_10018916 3300031344 Bacteria 5911
150 Ga0265316_10024448 3300031344 Bacteria 5062
151 Ga0265316_10040519 3300031344 Bacteria 3734
152 Ga0265316_10091373 3300031344 Bacteria 2322
153 Ga0265316_10211917 3300031344 Bacteria 1432
154 Ga0265316_10276380 3300031344 Bacteria 1228
155 Ga0265316_10280478 3300031344 Bacteria 1217
156 Ga0307408_100000033 3300031548 Bacteria 212574
157 Ga0265313_10000294 3300031595 Bacteria 54470
158 Ga0265313_10004162 3300031595 Bacteria 11238
159 Ga0265313_10011211 3300031595 Bacteria 5588
160 Ga0265313_10017952 3300031595 Bacteria 3995
161 Ga0265313_10018206 3300031595 Bacteria 3953
162 Ga0265313_10041760 3300031595 Bacteria 2257
163 Ga0265313_10126007 3300031595 Bacteria 1113
164 Ga0265314_10003784 3300031711 Bacteria 14461
165 Ga0265314_10005298 3300031711 Bacteria 11671
166 Ga0265314_10024490 3300031711 Bacteria 4575
167 Ga0265314_10038239 3300031711 Bacteria 3469
168 Ga0265314_10048527 3300031711 Bacteria 2979
169 Ga0265314_10061974 3300031711 Bacteria 2544
170 Ga0265314_10131697 3300031711 Bacteria 1559
171 Ga0265314_10147829 3300031711 Bacteria 1445
172 Ga0265342_10002105 3300031712 Bacteria 17557
173 Ga0265342_10004317 3300031712 Bacteria 11255
174 Ga0265342_10037790 3300031712 Bacteria 2942
175 Ga0265342_10050609 3300031712 Bacteria 2481
176 Ga0316576_10317864 3300031727 Unclassified 1162
177 Ga0307413_10135042 3300031824 Bacteria 1695
178 Ga0307410_10000025 3300031852 Bacteria 58385
179 Ga0307409_100000036 3300031995 Bacteria 47069
180 Ga0307416_100000061 3300032002 Bacteria 99793
181 Ga0373953_0020286 3300035117 Bacteria 2483
182 Ga0373937_0004676 3300036401 Bacteria 11633
183 Ga0373937_0020778 3300036401 Bacteria 5889
184 Ga0373937_0215960 3300036401 Bacteria 1805
185 Ga0373937_0564569 3300036401 Bacteria 1081
186 Ga0316584_0021111 3300036712 Bacteria 4728
187 Ga0395905_0000472 3300037471 Bacteria 55579
188 Ga0439441_027601 3300042001 Bacteria 1084
189 Ga0439460_0055183 3300042461 Bacteria 1200
190 Ga0451577_0001726 3300042876 Bacteria 28160
191 Ga0451577_0021726 3300042876 Bacteria 5869
192 Ga0451577_0339231 3300042876 Bacteria 1363
193 Ga0466972_0108915 3300044658 Bacteria 1309
194 Ga0453683_0016371 3300044673 Bacteria 4783
195 Ga0466966_0162096 3300044684 Bacteria 1361
196 Ga0466961_0115480 3300044693 Bacteria 1687
197 Ga0453684_0000001 3300044712 Bacteria 2623166
198 Ga0453684_0003800 3300044712 Bacteria 33316
199 Ga0453684_0081793 3300044712 Bacteria 4026
200 Ga0453684_0182188 3300044712 Bacteria 2465
201 Ga0453684_0201681 3300044712 Bacteria 2319
202 Ga0466968_0152482 3300044735 Bacteria 1063
203 Ga0466959_0106928 3300045049 Bacteria 2000
204 Ga0451576_0000214 3300045051 Bacteria 144183
205 Ga0451576_0000548 3300045051 Bacteria 80649
206 Ga0451576_0001941 3300045051 Bacteria 33031
207 Ga0451576_0037775 3300045051 Bacteria 5113
208 Ga0451576_0062556 3300045051 Bacteria 3880
209 Ga0451576_0074291 3300045051 Bacteria 3538
210 Ga0451576_0099126 3300045051 Bacteria 3031
211 Ga0451576_0267349 3300045051 Bacteria 1787
212 Ga0466967_0005071 3300045976 Bacteria 9037
213 Ga0495592_0206228 3300046454 Bacteria 1323
214 Ga0495629_0100186 3300046459 Bacteria 2022
215 Ga0495608_0051574 3300046511 Bacteria 2726
216 Ga0495618_0057340 3300046514 Bacteria 2466
217 Ga0495630_0251565 3300046517 Bacteria 1350
218 Ga0495640_0118018 3300046533 Bacteria 1727
219 Ga0495667_0036035 3300046559 Bacteria 3304
220 Ga0495657_0015114 3300046675 Bacteria 5656
221 Ga0495658_0106752 3300046683 Bacteria 1679
222 Ga0495658_0118471 3300046683 Bacteria 1599
223 Ga0495613_0041384 3300046689 Bacteria 3412
224 Ga0495674_0042060 3300047319 Unclassified 4079
225 Ga0495684_0031750 3300047471 Bacteria 4057
226 Ga0495684_0403966 3300047471 Bacteria 958
227 Ga0496104_0252221 3300048907 Bacteria 1677
228 Ga0496105_0418353 3300048908 Bacteria 1061
229 Ga0496116_0075516 3300048919 Bacteria 2114
230 Ga0501031_0215093 3300049568 Bacteria 1252
231 Ga0501032_0004446 3300049569 Bacteria 10568
232 Ga0501032_0043677 3300049569 Bacteria 3034
233 Ga0501033_0002513 3300049570 Bacteria 15534
234 Ga0501033_0026611 3300049570 Bacteria 4351
235 Ga0501033_0285593 3300049570 Bacteria 1164
236 Ga0501034_0003248 3300049571 Bacteria 18597
237 Ga0501034_0004101 3300049571 Bacteria 16353
238 Ga0501034_0069944 3300049571 Unclassified 3521
239 Ga0501034_0158452 3300049571 Bacteria 2236
240 Ga0501036_0001684 3300049572 Bacteria 17150
241 Ga0501037_0003556 3300049573 Bacteria 11307
242 Ga0501037_0329999 3300049573 Bacteria 1055
243 Ga0501038_0000869 3300049574 Bacteria 26757
244 Ga0501038_0031323 3300049574 Bacteria 4700
245 Ga0501039_0325476 3300049575 Bacteria 1208
246 Ga0501042_0085329 3300049578 Bacteria 2264
247 Ga0501042_0143128 3300049578 Bacteria 1724
248 Ga0501043_0000103 3300049579 Bacteria 78851
249 Ga0501046_0000009 3300049580 Bacteria 335813
250 Ga0501046_0000081 3300049580 Bacteria 101779
251 Ga0501046_0001395 3300049580 Bacteria 23259
252 Ga0501046_0003616 3300049580 Bacteria 14157
253 Ga0501046_0009388 3300049580 Bacteria 8456
254 Ga0501046_0107792 3300049580 Bacteria 2131
255 Ga0501047_0008026 3300049581 Bacteria 9957
256 Ga0501047_0013035 3300049581 Bacteria 7874
257 Ga0501047_0035385 3300049581 Bacteria 4825
258 Ga0501047_0209003 3300049581 Bacteria 1810
259 Ga0501047_0394878 3300049581 Bacteria 1216
260 Ga0501048_0002162 3300049582 Bacteria 14973
261 Ga0501070_0427424 3300049586 Bacteria 1069
262 Ga0501217_008828 3300049661 Bacteria 2184
263 Ga0501243_000148 3300049675 Bacteria 8052
264 Ga0501080_0041175 3300049742 Bacteria 4306
265 Ga0501083_0000037 3300049744 Bacteria 95622
266 Ga0501083_0002918 3300049744 Bacteria 11842
267 Ga0501083_0022729 3300049744 Bacteria 4352
268 Ga0501281_00172 3300049777 Bacteria 7513
269 Ga0501035_0002516 3300049822 Bacteria 17919
270 Ga0501035_0044601 3300049822 Bacteria 3992
271 Ga0501035_0159871 3300049822 Bacteria 1951
272 Ga0501044_0000067 3300049823 Bacteria 126697
273 Ga0501044_0005134 3300049823 Bacteria 14603
274 Ga0501044_0052028 3300049823 Bacteria 4222
275 Ga0501044_0147130 3300049823 Bacteria 2340
276 Ga0501044_0165164 3300049823 Bacteria 2188
277 Ga0501044_0259344 3300049823 Bacteria 1677
278 Ga0501045_0048659 3300049824 Bacteria 3090
279 Ga0501045_0059637 3300049824 Bacteria 2796
280 nmdc:mga05p37_4563_c1 3300050507 Bacteria 16191
281 nmdc:mga05p37_69755_c1 3300050507 Bacteria 4323
282 nmdc:mga06r32_148270_c1 3300050510 Unclassified 2324
283 nmdc:mga0n895_135432_c1 3300050512 Bacteria 2490
284 nmdc:mga0n895_5726_c1 3300050512 Bacteria 10428
285 nmdc:mga0rr50_39779_c1 3300050513 Bacteria 3413
286 nmdc:mga0rr50_7763_c1 3300050513 Bacteria 6646
287 nmdc:mga0a205_45610_c1 3300050515 Bacteria 4227
288 Ga0495619_0219553 3300053085 Bacteria 1317
289 Ga0501084_0051881 3300054114 Bacteria 3433
290 Ga0501082_0045374 3300060353 Bacteria 3791
291 Ga0501082_0073316 3300060353 Bacteria 2949

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025926 Ga0207659_10351192 Ga0207659_103511922 230
2 3300048907 Ga0496104_0252221 Ga0496104_0252221_142_846 232
3 3300046517 Ga0495630_0251565 Ga0495630_0251565_56_811 249
4 3300005530 Ga0070679_100013974 Ga0070679_1000139745 262
5 3300050510 nmdc:mga06r32_148270_c1 nmdc:mga06r32_148270_c1_66_926 263
6 3300048908 Ga0496105_0418353 Ga0496105_0418353_66_929 264
7 3300006871 Ga0075434_100026442 Ga0075434_1000264425 265
8 3300009147 Ga0114129_10026628 Ga0114129_100266284 265
9 3300009147 Ga0114129_10092938 Ga0114129_100929383 265
10 3300050507 nmdc:mga05p37_69755_c1 nmdc:mga05p37_69755_c1_771_1637 265
11 3300044712 Ga0453684_0201681 Ga0453684_0201681_1285_2220 267
12 3300045051 Ga0451576_0074291 Ga0451576_0074291_682_1617 267
13 3300009177 Ga0105248_10309793 Ga0105248_103097932 268
14 3300044735 Ga0466968_0152482 Ga0466968_0152482_159_1013 269
15 3300046683 Ga0495658_0106752 Ga0495658_0106752_373_1239 269
16 3300005435 Ga0070714_100010198 Ga0070714_1000101982 271
17 3300042461 Ga0439460_0055183 Ga0439460_0055183_94_987 277
18 3300049661 Ga0501217_008828 Ga0501217_008828_1078_1953 277
19 iso_pu_bacteria 2786546940 2788437238 278
20 3300005336 Ga0070680_100481007 Ga0070680_1004810071 279
21 3300005548 Ga0070665_100459628 Ga0070665_1004596282 279
22 3300009148 Ga0105243_10703570 Ga0105243_107035701 279
23 3300028563 Ga0265319_1009228 Ga0265319_10092282 279
24 3300028653 Ga0265323_10000260 Ga0265323_100002605 279
25 3300028654 Ga0265322_10001104 Ga0265322_100011045 279
26 3300031249 Ga0265339_10103708 Ga0265339_101037082 279
27 3300031344 Ga0265316_10014564 Ga0265316_100145643 279
28 3300031711 Ga0265314_10147829 Ga0265314_101478292 279
29 3300031712 Ga0265342_10004317 Ga0265342_100043173 279
30 3300042876 Ga0451577_0339231 Ga0451577_0339231_211_1089 279
31 3300044712 Ga0453684_0003800 Ga0453684_0003800_3005_3883 279
32 3300045051 Ga0451576_0062556 Ga0451576_0062556_103_1089 279
33 3300045051 Ga0451576_0267349 Ga0451576_0267349_218_1105 279
34 iso_pu_bacteria 2889276214 2889276329 279
35 3300003320 rootH2_10012478 rootH2_100124785 280
36 3300003323 rootH1_10009474 rootH1_100094745 280
37 3300003323 rootH1_10073915 rootH1_100739154 280
38 3300005329 Ga0070683_100183047 Ga0070683_1001830472 280
39 3300005334 Ga0068869_100000032 Ga0068869_10000003212 280
40 3300005459 Ga0068867_100001662 Ga0068867_10000166213 280
41 3300005614 Ga0068856_100003018 Ga0068856_10000301811 280
42 3300005614 Ga0068856_100763208 Ga0068856_1007632081 280
43 3300005718 Ga0068866_10031069 Ga0068866_100310691 280
44 3300006028 Ga0070717_10000018 Ga0070717_1000001816 280
45 3300006237 Ga0097621_100003049 Ga0097621_1000030498 280
46 3300006358 Ga0068871_100002955 Ga0068871_1000029555 280
47 3300006881 Ga0068865_100001562 Ga0068865_1000015623 280
48 3300009093 Ga0105240_10063662 Ga0105240_100636623 280
49 3300025921 Ga0207652_10009895 Ga0207652_100098955 280
50 3300025938 Ga0207704_10025752 Ga0207704_100257522 280
51 3300025942 Ga0207689_10000640 Ga0207689_1000064023 280
52 3300025944 Ga0207661_10006456 Ga0207661_100064563 280
53 3300026078 Ga0207702_10023295 Ga0207702_100232954 280
54 3300026089 Ga0207648_10001776 Ga0207648_1000177619 280
55 3300026116 Ga0207674_10100085 Ga0207674_101000852 280
56 3300028556 Ga0265337_1012260 Ga0265337_10122602 280
57 3300028556 Ga0265337_1024175 Ga0265337_10241751 280
58 3300028563 Ga0265319_1000398 Ga0265319_100039823 280
59 3300028563 Ga0265319_1000811 Ga0265319_100081111 280
60 3300028563 Ga0265319_1000931 Ga0265319_100093112 280
61 3300028563 Ga0265319_1001954 Ga0265319_10019548 280
62 3300028563 Ga0265319_1004700 Ga0265319_10047006 280
63 3300028563 Ga0265319_1005381 Ga0265319_10053812 280
64 3300028563 Ga0265319_1008804 Ga0265319_10088042 280
65 3300028563 Ga0265319_1015762 Ga0265319_10157621 280
66 3300028563 Ga0265319_1020958 Ga0265319_10209582 280
67 3300028573 Ga0265334_10006004 Ga0265334_100060042 280
68 3300028573 Ga0265334_10031336 Ga0265334_100313362 280
69 3300028577 Ga0265318_10000356 Ga0265318_1000035624 280
70 3300028577 Ga0265318_10000538 Ga0265318_1000053816 280
71 3300028577 Ga0265318_10001258 Ga0265318_100012589 280
72 3300028577 Ga0265318_10002812 Ga0265318_100028125 280
73 3300028577 Ga0265318_10025784 Ga0265318_100257842 280
74 3300028577 Ga0265318_10041678 Ga0265318_100416783 280
75 3300028577 Ga0265318_10043521 Ga0265318_100435212 280
76 3300028653 Ga0265323_10000087 Ga0265323_1000008744 280
77 3300028653 Ga0265323_10003378 Ga0265323_100033782 280
78 3300028653 Ga0265323_10011762 Ga0265323_100117623 280
79 3300028653 Ga0265323_10026774 Ga0265323_100267742 280
80 3300028653 Ga0265323_10073018 Ga0265323_100730181 280
81 3300028654 Ga0265322_10015028 Ga0265322_100150282 280
82 3300028666 Ga0265336_10012422 Ga0265336_100124223 280
83 3300028800 Ga0265338_10000619 Ga0265338_1000061914 280
84 3300028800 Ga0265338_10001341 Ga0265338_1000134115 280
85 3300028800 Ga0265338_10012783 Ga0265338_100127832 280
86 3300028800 Ga0265338_10198079 Ga0265338_101980792 280
87 3300029957 Ga0265324_10000015 Ga0265324_1000001529 280
88 3300029957 Ga0265324_10003090 Ga0265324_100030908 280
89 3300029957 Ga0265324_10003307 Ga0265324_100033073 280
90 3300031235 Ga0265330_10004188 Ga0265330_100041887 280
91 3300031235 Ga0265330_10010184 Ga0265330_100101843 280
92 3300031235 Ga0265330_10015232 Ga0265330_100152322 280
93 3300031235 Ga0265330_10047324 Ga0265330_100473242 280
94 3300031238 Ga0265332_10043288 Ga0265332_100432883 280
95 3300031238 Ga0265332_10091101 Ga0265332_100911011 280
96 3300031238 Ga0265332_10119978 Ga0265332_101199781 280
97 3300031239 Ga0265328_10015926 Ga0265328_100159262 280
98 3300031240 Ga0265320_10000008 Ga0265320_1000000836 280
99 3300031240 Ga0265320_10000415 Ga0265320_100004151 280
100 3300031240 Ga0265320_10000627 Ga0265320_100006279 280
101 3300031240 Ga0265320_10001257 Ga0265320_100012574 280
102 3300031240 Ga0265320_10003098 Ga0265320_100030983 280
103 3300031240 Ga0265320_10003559 Ga0265320_100035592 280
104 3300031240 Ga0265320_10014016 Ga0265320_100140165 280
105 3300031240 Ga0265320_10017490 Ga0265320_100174903 280
106 3300031240 Ga0265320_10090334 Ga0265320_100903341 280
107 3300031240 Ga0265320_10107699 Ga0265320_101076992 280
108 3300031241 Ga0265325_10013545 Ga0265325_100135454 280
109 3300031241 Ga0265325_10032943 Ga0265325_100329432 280
110 3300031241 Ga0265325_10077377 Ga0265325_100773772 280
111 3300031242 Ga0265329_10043241 Ga0265329_100432412 280
112 3300031247 Ga0265340_10070547 Ga0265340_100705472 280
113 3300031249 Ga0265339_10017844 Ga0265339_100178443 280
114 3300031249 Ga0265339_10071251 Ga0265339_100712512 280
115 3300031250 Ga0265331_10003602 Ga0265331_100036024 280
116 3300031250 Ga0265331_10022937 Ga0265331_100229372 280
117 3300031251 Ga0265327_10000325 Ga0265327_1000032549 280
118 3300031251 Ga0265327_10001875 Ga0265327_1000187521 280
119 3300031251 Ga0265327_10002702 Ga0265327_1000270213 280
120 3300031251 Ga0265327_10012318 Ga0265327_100123184 280
121 3300031344 Ga0265316_10013966 Ga0265316_100139663 280
122 3300031344 Ga0265316_10018916 Ga0265316_100189162 280
123 3300031344 Ga0265316_10024448 Ga0265316_100244483 280
124 3300031344 Ga0265316_10040519 Ga0265316_100405194 280
125 3300031344 Ga0265316_10091373 Ga0265316_100913732 280
126 3300031344 Ga0265316_10211917 Ga0265316_102119172 280
127 3300031344 Ga0265316_10276380 Ga0265316_102763801 280
128 3300031344 Ga0265316_10280478 Ga0265316_102804781 280
129 3300031548 Ga0307408_100000033 Ga0307408_10000003332 280
130 3300031595 Ga0265313_10000294 Ga0265313_1000029442 280
131 3300031595 Ga0265313_10004162 Ga0265313_100041626 280
132 3300031595 Ga0265313_10011211 Ga0265313_100112112 280
133 3300031595 Ga0265313_10017952 Ga0265313_100179523 280
134 3300031595 Ga0265313_10018206 Ga0265313_100182062 280
135 3300031595 Ga0265313_10041760 Ga0265313_100417602 280
136 3300031595 Ga0265313_10126007 Ga0265313_101260072 280
137 3300031711 Ga0265314_10003784 Ga0265314_1000378410 280
138 3300031711 Ga0265314_10005298 Ga0265314_100052982 280
139 3300031711 Ga0265314_10024490 Ga0265314_100244902 280
140 3300031711 Ga0265314_10038239 Ga0265314_100382392 280
141 3300031711 Ga0265314_10048527 Ga0265314_100485273 280
142 3300031711 Ga0265314_10061974 Ga0265314_100619742 280
143 3300031711 Ga0265314_10131697 Ga0265314_101316972 280
144 3300031712 Ga0265342_10002105 Ga0265342_100021054 280
145 3300031712 Ga0265342_10037790 Ga0265342_100377902 280
146 3300031712 Ga0265342_10050609 Ga0265342_100506092 280
147 3300031727 Ga0316576_10317864 Ga0316576_103178642 280
148 3300031824 Ga0307413_10135042 Ga0307413_101350422 280
149 3300031852 Ga0307410_10000025 Ga0307410_1000002514 280
150 3300031995 Ga0307409_100000036 Ga0307409_10000003614 280
151 3300032002 Ga0307416_100000061 Ga0307416_10000006145 280
152 3300036712 Ga0316584_0021111 Ga0316584_0021111_1504_2400 280
153 3300037471 Ga0395905_0000472 Ga0395905_0000472_10780_11676 280
154 3300042001 Ga0439441_027601 Ga0439441_027601_171_1067 280
155 3300042876 Ga0451577_0001726 Ga0451577_0001726_22737_23639 280
156 3300042876 Ga0451577_0021726 Ga0451577_0021726_4955_5842 280
157 3300044658 Ga0466972_0108915 Ga0466972_0108915_191_1099 280
158 3300044673 Ga0453683_0016371 Ga0453683_0016371_93_989 280
159 3300044684 Ga0466966_0162096 Ga0466966_0162096_371_1264 280
160 3300044693 Ga0466961_0115480 Ga0466961_0115480_138_1031 280
161 3300044712 Ga0453684_0000001 Ga0453684_0000001_1282708_1283595 280
162 3300044712 Ga0453684_0081793 Ga0453684_0081793_686_1588 280
163 3300044712 Ga0453684_0182188 Ga0453684_0182188_1483_2382 280
164 3300045049 Ga0466959_0106928 Ga0466959_0106928_578_1471 280
165 3300045051 Ga0451576_0000214 Ga0451576_0000214_17411_18430 280
166 3300045051 Ga0451576_0000548 Ga0451576_0000548_37740_38636 280
167 3300045051 Ga0451576_0001941 Ga0451576_0001941_8243_9142 280
168 3300045051 Ga0451576_0037775 Ga0451576_0037775_3775_4671 280
169 3300045051 Ga0451576_0099126 Ga0451576_0099126_1916_2815 280
170 3300045976 Ga0466967_0005071 Ga0466967_0005071_8060_8959 280
171 3300049568 Ga0501031_0215093 Ga0501031_0215093_186_1154 280
172 3300049569 Ga0501032_0004446 Ga0501032_0004446_4834_5730 280
173 3300049569 Ga0501032_0043677 Ga0501032_0043677_2046_2984 280
174 3300049570 Ga0501033_0002513 Ga0501033_0002513_13465_14361 280
175 3300049570 Ga0501033_0026611 Ga0501033_0026611_643_1539 280
176 3300049570 Ga0501033_0285593 Ga0501033_0285593_77_1009 280
177 3300049571 Ga0501034_0003248 Ga0501034_0003248_9085_10023 280
178 3300049571 Ga0501034_0004101 Ga0501034_0004101_5248_6207 280
179 3300049571 Ga0501034_0069944 Ga0501034_0069944_1192_2136 280
180 3300049571 Ga0501034_0158452 Ga0501034_0158452_1116_2108 280
181 3300049572 Ga0501036_0001684 Ga0501036_0001684_14539_15435 280
182 3300049573 Ga0501037_0003556 Ga0501037_0003556_9028_9969 280
183 3300049573 Ga0501037_0329999 Ga0501037_0329999_120_1028 280
184 3300049574 Ga0501038_0000869 Ga0501038_0000869_11202_12143 280
185 3300049574 Ga0501038_0031323 Ga0501038_0031323_460_1356 280
186 3300049575 Ga0501039_0325476 Ga0501039_0325476_199_1140 280
187 3300049578 Ga0501042_0085329 Ga0501042_0085329_770_1666 280
188 3300049578 Ga0501042_0143128 Ga0501042_0143128_260_1228 280
189 3300049579 Ga0501043_0000103 Ga0501043_0000103_65142_66110 280
190 3300049580 Ga0501046_0000009 Ga0501046_0000009_262403_263350 280
191 3300049580 Ga0501046_0000081 Ga0501046_0000081_59359_60327 280
192 3300049580 Ga0501046_0001395 Ga0501046_0001395_5500_6396 280
193 3300049580 Ga0501046_0003616 Ga0501046_0003616_7256_8155 280
194 3300049580 Ga0501046_0009388 Ga0501046_0009388_5865_6764 280
195 3300049580 Ga0501046_0107792 Ga0501046_0107792_104_1018 280
196 3300049581 Ga0501047_0008026 Ga0501047_0008026_3029_3928 280
197 3300049581 Ga0501047_0013035 Ga0501047_0013035_6458_7426 280
198 3300049581 Ga0501047_0035385 Ga0501047_0035385_982_1896 280
199 3300049581 Ga0501047_0209003 Ga0501047_0209003_846_1742 280
200 3300049581 Ga0501047_0394878 Ga0501047_0394878_196_1095 280
201 3300049582 Ga0501048_0002162 Ga0501048_0002162_13445_14413 280
202 3300049586 Ga0501070_0427424 Ga0501070_0427424_143_1039 280
203 3300049675 Ga0501243_000148 Ga0501243_000148_5295_6191 280
204 3300049742 Ga0501080_0041175 Ga0501080_0041175_3354_4295 280
205 3300049744 Ga0501083_0000037 Ga0501083_0000037_35296_36264 280
206 3300049744 Ga0501083_0002918 Ga0501083_0002918_2267_3172 280
207 3300049744 Ga0501083_0022729 Ga0501083_0022729_703_1608 280
208 3300049777 Ga0501281_00172 Ga0501281_00172_236_1183 280
209 3300049822 Ga0501035_0002516 Ga0501035_0002516_11307_12203 280
210 3300049822 Ga0501035_0044601 Ga0501035_0044601_855_1754 280
211 3300049822 Ga0501035_0159871 Ga0501035_0159871_94_990 280
212 3300049823 Ga0501044_0000067 Ga0501044_0000067_22781_23680 280
213 3300049823 Ga0501044_0005134 Ga0501044_0005134_1151_2059 280
214 3300049823 Ga0501044_0052028 Ga0501044_0052028_265_1161 280
215 3300049823 Ga0501044_0147130 Ga0501044_0147130_676_1626 280
216 3300049823 Ga0501044_0165164 Ga0501044_0165164_795_1763 280
217 3300049823 Ga0501044_0259344 Ga0501044_0259344_676_1605 280
218 3300049824 Ga0501045_0048659 Ga0501045_0048659_1006_1974 280
219 3300049824 Ga0501045_0059637 Ga0501045_0059637_174_1070 280
220 3300054114 Ga0501084_0051881 Ga0501084_0051881_990_1958 280
221 3300060353 Ga0501082_0045374 Ga0501082_0045374_1332_2228 280
222 3300060353 Ga0501082_0073316 Ga0501082_0073316_1913_2881 280
223 3300006028 Ga0070717_10004623 Ga0070717_100046231 282
224 3300006844 Ga0075428_100000803 Ga0075428_10000080319 282
225 3300025929 Ga0207664_10000859 Ga0207664_100008598 282
226 3300048919 Ga0496116_0075516 Ga0496116_0075516_689_1696 282
227 3300050512 nmdc:mga0n895_5726_c1 nmdc:mga0n895_5726_c1_9360_10253 282
228 iso_pu_bacteria 8055632911 8055633516 282
229 3300010375 Ga0105239_10024936 Ga0105239_100249364 285
230 2162886011 MRS1b_contig_1788733 MRS1b_0026.00001790 286
231 3300005290 Ga0065712_10072190 Ga0065712_100721904 286
232 3300005331 Ga0070670_100002856 Ga0070670_1000028567 286
233 3300005338 Ga0068868_100000800 Ga0068868_10000080014 286
234 3300005344 Ga0070661_100016606 Ga0070661_1000166063 286
235 3300005354 Ga0070675_100017464 Ga0070675_1000174643 286
236 3300005367 Ga0070667_100014176 Ga0070667_1000141762 286
237 3300005535 Ga0070684_100095740 Ga0070684_1000957402 286
238 3300005543 Ga0070672_100000416 Ga0070672_10000041614 286
239 3300005617 Ga0068859_100310729 Ga0068859_1003107292 286
240 3300005618 Ga0068864_100119365 Ga0068864_1001193653 286
241 3300005841 Ga0068863_100004289 Ga0068863_1000042893 286
242 3300005841 Ga0068863_100158957 Ga0068863_1001589573 286
243 3300005842 Ga0068858_100035417 Ga0068858_1000354173 286
244 3300005842 Ga0068858_100115403 Ga0068858_1001154032 286
245 3300006358 Ga0068871_100007314 Ga0068871_1000073146 286
246 3300006358 Ga0068871_100418016 Ga0068871_1004180162 286
247 3300006852 Ga0075433_10019285 Ga0075433_100192853 286
248 3300006871 Ga0075434_100056639 Ga0075434_1000566394 286
249 3300006871 Ga0075434_100713407 Ga0075434_1007134072 286
250 3300006931 Ga0097620_100310724 Ga0097620_1003107242 286
251 3300007265 Ga0099794_10109213 Ga0099794_101092132 286
252 3300009147 Ga0114129_10000063 Ga0114129_1000006335 286
253 3300009147 Ga0114129_10376565 Ga0114129_103765652 286
254 3300009177 Ga0105248_10019763 Ga0105248_100197635 286
255 3300013306 Ga0163162_10007450 Ga0163162_100074507 286
256 3300013308 Ga0157375_10007813 Ga0157375_100078138 286
257 3300013308 Ga0157375_10164305 Ga0157375_101643052 286
258 3300014325 Ga0163163_10009845 Ga0163163_100098456 286
259 3300025903 Ga0207680_10032712 Ga0207680_100327122 286
260 3300025920 Ga0207649_10010072 Ga0207649_100100723 286
261 3300025925 Ga0207650_10002505 Ga0207650_100025057 286
262 3300025940 Ga0207691_10003943 Ga0207691_100039435 286
263 3300025941 Ga0207711_10006927 Ga0207711_100069275 286
264 3300025945 Ga0207679_10004521 Ga0207679_100045214 286
265 3300026023 Ga0207677_10000935 Ga0207677_1000093511 286
266 3300026035 Ga0207703_10440643 Ga0207703_104406432 286
267 3300026088 Ga0207641_10001664 Ga0207641_1000166411 286
268 3300026088 Ga0207641_10363926 Ga0207641_103639262 286
269 3300026095 Ga0207676_10356398 Ga0207676_103563982 286
270 3300026121 Ga0207683_10372301 Ga0207683_103723012 286
271 3300035117 Ga0373953_0020286 Ga0373953_0020286_1043_1909 286
272 3300036401 Ga0373937_0004676 Ga0373937_0004676_8678_9544 286
273 3300036401 Ga0373937_0020778 Ga0373937_0020778_3743_4618 286
274 3300036401 Ga0373937_0215960 Ga0373937_0215960_750_1616 286
275 3300036401 Ga0373937_0564569 Ga0373937_0564569_187_1053 286
276 3300046454 Ga0495592_0206228 Ga0495592_0206228_32_898 286
277 3300046459 Ga0495629_0100186 Ga0495629_0100186_1069_1935 286
278 3300046511 Ga0495608_0051574 Ga0495608_0051574_920_1786 286
279 3300046514 Ga0495618_0057340 Ga0495618_0057340_866_1732 286
280 3300046533 Ga0495640_0118018 Ga0495640_0118018_403_1269 286
281 3300046559 Ga0495667_0036035 Ga0495667_0036035_925_1791 286
282 3300046675 Ga0495657_0015114 Ga0495657_0015114_4192_5058 286
283 3300046683 Ga0495658_0118471 Ga0495658_0118471_465_1331 286
284 3300046689 Ga0495613_0041384 Ga0495613_0041384_1384_2250 286
285 3300047319 Ga0495674_0042060 Ga0495674_0042060_2191_3057 286
286 3300047471 Ga0495684_0031750 Ga0495684_0031750_216_1082 286
287 3300047471 Ga0495684_0403966 Ga0495684_0403966_28_894 286
288 3300050507 nmdc:mga05p37_4563_c1 nmdc:mga05p37_4563_c1_3288_4154 286
289 3300050512 nmdc:mga0n895_135432_c1 nmdc:mga0n895_135432_c1_550_1416 286
290 3300050513 nmdc:mga0rr50_39779_c1 nmdc:mga0rr50_39779_c1_1623_2489 286
291 3300050513 nmdc:mga0rr50_7763_c1 nmdc:mga0rr50_7763_c1_1031_1897 286
292 3300050515 nmdc:mga0a205_45610_c1 nmdc:mga0a205_45610_c1_1397_2263 286
293 3300053085 Ga0495619_0219553 Ga0495619_0219553_106_972 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

97

258

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5exk-assembly6.cif.gz_K crystal structure of m. tuberculosis lipoyl synthase with 6-thiooctanoyl peptide intermediate 0.968 4 285
4u0p-assembly1.cif.gz_B the crystal structure of lipoyl synthase in complex with s-adenosyl homocysteine 0.9542 4 276
4u0o-assembly1.cif.gz_B crystal structure of thermosynechococcus elongatus lipoyl synthase 2 complexed with mta and dtt 0.9507 5 277
5exk-assembly6.cif.gz_K crystal structure of m. tuberculosis lipoyl synthase with 6-thiooctanoyl peptide intermediate 0.9416 4 285
4u0o-assembly1.cif.gz_B crystal structure of thermosynechococcus elongatus lipoyl synthase 2 complexed with mta and dtt 0.9405 5 277
ID Description Score Start End Superfamily
af_P60716_82_298_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9889 49 262 3.20.20.70
af_Q2FZX4_3_265_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.988 4 257 3.20.20.70
af_P9WK91_74_280_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9875 54 261 3.20.20.70
af_P9WK91_74_280_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9781 54 261 3.20.20.70
af_P0CH67_115_331_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9741 44 252 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3D3CMG9-F1-model_v4 lipoyl synthase (EC 2.8.1.8) 0.9975 55 243 GO:0016992
GO:0046872
GO:0051539
AF-A0A6N7M039-F1-model_v4 lipoyl synthase (EC 2.8.1.8) 0.9957 37 235 GO:0016992
GO:0046872
GO:0051539
AF-A0A535Q8R3-F1-model_v4 Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA) 0.9952 55 277 GO:0005737
GO:0016992
GO:0046872
GO:0051539
AF-A0A2M8B1D6-F1-model_v4 Lipoyl synthase 0.9928 74 277 GO:0016992
GO:0046872
GO:0051539
AF-A0A1F9LHL1-F1-model_v4 Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA) 0.9924 95 265 GO:0005737
GO:0016992
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
90.69 0.9 High
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Predicted Structure (AlphaFold2)

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