F391308

General Info

Members Datasets Scaffolds Average Seq Length
293 186 586 301

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10153692|Ga0065707_101536921
Length 323
Sequence MLLVPHYTITDYQLPISMSRITVYEVGPRDGLQNETVNVPTTEKIAFIDRLSTAGLPVIEVSAFVSPKWMPQMADAAEVFRGIGQRPGTRYSALVPNLKGLARASEAGVTEVAVFAAASETFSRRNINQSIDESFQSFREVSTAAAASRIRVRGYLSTAFGCPFEGDVPIARVIDLTKRLLDLGLYEIAVSDTIGIAHPGQVRVLLSRLSESVPVDRIALHFHDTRGTALVNVLTALEFGIRTFDASAGGLGGCPYAPGASGNLATEDLLYLLHGLGHETGVRLDGVVSAAQPLERVVGHRLPSRVFQATLATTKPSPPSSPS

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
105 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
126 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
168 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
182 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2919513703 Luteimonas sp. 3794 Isolate Unclassified
186 2919675420 Luteimonas terrae 4099 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0.34
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.85
Nodule 0
Rhizoplane 2.39
Rhizosphere 86.01
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10153692 3300005295 Bacteria 1631
2 Ga0065712_10079190 3300005290 Bacteria 3248
3 Ga0070683_100014479 3300005329 Bacteria 6900
4 Ga0070683_100321098 3300005329 Bacteria 1474
5 Ga0070683_100334689 3300005329 Bacteria 1441
6 Ga0070690_100037017 3300005330 Bacteria 3072
7 Ga0070677_10056986 3300005333 Bacteria 1600
8 Ga0068869_100031499 3300005334 Bacteria 3731
9 Ga0070666_10112855 3300005335 Bacteria 1880
10 Ga0068868_100032378 3300005338 Bacteria 4021
11 Ga0070689_100007056 3300005340 Bacteria 7819
12 Ga0070691_10008247 3300005341 Bacteria 4772
13 Ga0070668_100042125 3300005347 Bacteria 3499
14 Ga0070673_100263518 3300005364 Bacteria 1506
15 Ga0070688_100026430 3300005365 Bacteria 3448
16 Ga0070688_100150877 3300005365 Bacteria 1588
17 Ga0070714_100409077 3300005435 Bacteria 1284
18 Ga0070713_100014482 3300005436 Bacteria 5860
19 Ga0070694_100075008 3300005444 Bacteria 2339
20 Ga0070708_100017531 3300005445 Bacteria 5978
21 Ga0070708_100024533 3300005445 Bacteria 5147
22 Ga0070681_10068513 3300005458 Bacteria 3515
23 Ga0068867_100255097 3300005459 Bacteria 1428
24 Ga0070685_10071843 3300005466 Bacteria 2052
25 Ga0070706_100000261 3300005467 Bacteria 64138
26 Ga0070706_100043652 3300005467 Bacteria 4142
27 Ga0070706_100087622 3300005467 Bacteria 2886
28 Ga0070706_100127029 3300005467 Bacteria 2378
29 Ga0070707_100008910 3300005468 Bacteria 9308
30 Ga0070707_100390967 3300005468 Bacteria 1351
31 Ga0070707_100440522 3300005468 Bacteria 1263
32 Ga0070707_100640618 3300005468 Bacteria 1025
33 Ga0070698_100002589 3300005471 Bacteria 19918
34 Ga0070698_100087476 3300005471 Bacteria 3102
35 Ga0070698_100146802 3300005471 Bacteria 2307
36 Ga0070699_100000775 3300005518 Bacteria 29508
37 Ga0070699_100020249 3300005518 Bacteria 5735
38 Ga0070699_100134727 3300005518 Bacteria 2179
39 Ga0070684_100087002 3300005535 Bacteria 2774
40 Ga0070684_100194129 3300005535 Bacteria 1848
41 Ga0070697_100052221 3300005536 Bacteria 3321
42 Ga0070697_100202094 3300005536 Bacteria 1689
43 Ga0070697_100229081 3300005536 Bacteria 1585
44 Ga0070697_100443933 3300005536 Bacteria 1130
45 Ga0070695_100014247 3300005545 Bacteria 4791
46 Ga0070704_100057862 3300005549 Bacteria 2759
47 Ga0070704_100098706 3300005549 Bacteria 2195
48 Ga0070704_100387502 3300005549 Bacteria 1189
49 Ga0068855_100030329 3300005563 Bacteria 6469
50 Ga0070664_100066668 3300005564 Bacteria 3074
51 Ga0068857_100038799 3300005577 Bacteria 4217
52 Ga0068859_100000016 3300005617 Bacteria 261719
53 Ga0068859_100005982 3300005617 Bacteria 12355
54 Ga0068859_100272179 3300005617 Bacteria 1786
55 Ga0068864_100105500 3300005618 Bacteria 2505
56 Ga0068866_10121271 3300005718 Bacteria 1474
57 Ga0068870_10029130 3300005840 Bacteria 2779
58 Ga0068863_100018015 3300005841 Bacteria 6760
59 Ga0068858_100014373 3300005842 Bacteria 7464
60 Ga0068860_100038377 3300005843 Bacteria 4581
61 Ga0068862_100057845 3300005844 Bacteria 3326
62 Ga0068862_100069535 3300005844 Bacteria 3039
63 Ga0075365_10016617 3300006038 Bacteria 4480
64 Ga0075368_10070708 3300006042 Bacteria 1409
65 Ga0075363_100056877 3300006048 Bacteria 2098
66 Ga0075363_100259470 3300006048 Bacteria 1002
67 Ga0075364_10000167 3300006051 Bacteria 29270
68 Ga0075364_10015598 3300006051 Bacteria 4714
69 Ga0075364_10114224 3300006051 Bacteria 1804
70 Ga0075364_10128170 3300006051 Bacteria 1702
71 Ga0075367_10045694 3300006178 Bacteria 2570
72 Ga0075366_10000103 3300006195 Bacteria 34163
73 Ga0075370_10024310 3300006353 Bacteria 3346
74 Ga0068871_100081696 3300006358 Bacteria 2678
75 Ga0068871_100195040 3300006358 Bacteria 1746
76 Ga0075428_100002121 3300006844 Bacteria 21402
77 Ga0075428_100030067 3300006844 Bacteria 6007
78 Ga0075428_100046297 3300006844 Bacteria 4778
79 Ga0075430_100096574 3300006846 Bacteria 2470
80 Ga0075431_100001459 3300006847 Bacteria 21810
81 Ga0075431_100063452 3300006847 Bacteria 3813
82 Ga0075433_10057145 3300006852 Bacteria 3410
83 Ga0075433_10087928 3300006852 Bacteria 2745
84 Ga0075433_10121629 3300006852 Bacteria 2318
85 Ga0075434_100138434 3300006871 Bacteria 2454
86 Ga0075434_100435264 3300006871 Bacteria 1333
87 Ga0068865_100016259 3300006881 Bacteria 4757
88 Ga0097620_100000016 3300006931 Bacteria 261719
89 Ga0097620_100005981 3300006931 Bacteria 12355
90 Ga0097620_100272181 3300006931 Bacteria 1786
91 Ga0075435_100066284 3300007076 Bacteria 2937
92 Ga0105244_10018407 3300009036 Bacteria 3919
93 Ga0105250_10004797 3300009092 Bacteria 6160
94 Ga0111539_10004633 3300009094 Bacteria 17958
95 Ga0111539_10005012 3300009094 Bacteria 17220
96 Ga0111539_10008044 3300009094 Bacteria 13446
97 Ga0111539_10020021 3300009094 Bacteria 8243
98 Ga0111539_10034718 3300009094 Bacteria 6111
99 Ga0111539_10131372 3300009094 Bacteria 2932
100 Ga0111539_10308777 3300009094 Bacteria 1841
101 Ga0114129_10000313 3300009147 Bacteria 56679
102 Ga0114129_10033847 3300009147 Bacteria 7218
103 Ga0114129_10037831 3300009147 Bacteria 6810
104 Ga0114129_10057776 3300009147 Bacteria 5428
105 Ga0114129_10139731 3300009147 Bacteria 3321
106 Ga0114129_10235937 3300009147 Bacteria 2461
107 Ga0105241_10515093 3300009174 Bacteria 1069
108 Ga0105242_10186300 3300009176 Bacteria 1834
109 Ga0105248_10108966 3300009177 Bacteria 3123
110 Ga0105248_10288764 3300009177 Bacteria 1847
111 Ga0105237_10655337 3300009545 Bacteria 1056
112 Ga0157369_10010114 3300013105 Bacteria 10766
113 Ga0157378_10288905 3300013297 Unclassified 1583
114 Ga0163162_10579857 3300013306 Bacteria 1249
115 Ga0157375_10079987 3300013308 Bacteria 3305
116 Ga0157380_10051840 3300014326 Bacteria 3247
117 Ga0157380_10052875 3300014326 Bacteria 3218
118 Ga0157380_10255678 3300014326 Bacteria 1588
119 Ga0157377_10212694 3300014745 Bacteria 1234
120 Ga0163161_10113037 3300017792 Bacteria 2032
121 Ga0206356_11151818 3300020070 Bacteria 2166
122 Ga0213874_10000438 3300021377 Bacteria 8334
123 Ga0209051_1022617 3300025303 Bacteria 2642
124 Ga0207696_1005517 3300025711 Bacteria 5237
125 Ga0207713_1008700 3300025735 Bacteria 5800
126 Ga0207682_10016152 3300025893 Bacteria 2909
127 Ga0207642_10099207 3300025899 Bacteria 1458
128 Ga0207688_10116063 3300025901 Bacteria 1558
129 Ga0207643_10035047 3300025908 Bacteria 2813
130 Ga0207684_10027407 3300025910 Bacteria 4855
131 Ga0207684_10042534 3300025910 Bacteria 3851
132 Ga0207684_10071548 3300025910 Bacteria 2947
133 Ga0207684_10158687 3300025910 Bacteria 1947
134 Ga0207707_10171408 3300025912 Bacteria 1896
135 Ga0207660_10355272 3300025917 Bacteria 1175
136 Ga0207662_10000915 3300025918 Bacteria 13676
137 Ga0207646_10009158 3300025922 Bacteria 9823
138 Ga0207646_10012136 3300025922 Bacteria 8290
139 Ga0207646_10076377 3300025922 Bacteria 2993
140 Ga0207646_10305720 3300025922 Bacteria 1437
141 Ga0207681_10112078 3300025923 Bacteria 1986
142 Ga0207659_10041424 3300025926 Bacteria 3225
143 Ga0207700_10008131 3300025928 Bacteria 6475
144 Ga0207664_10434788 3300025929 Bacteria 1170
145 Ga0207709_10027837 3300025935 Bacteria 3261
146 Ga0207704_10070699 3300025938 Bacteria 2211
147 Ga0207665_10329890 3300025939 Bacteria 1147
148 Ga0207689_10019619 3300025942 Bacteria 5699
149 Ga0207661_10026218 3300025944 Bacteria 4438
150 Ga0207661_10041376 3300025944 Bacteria 3627
151 Ga0207661_10054021 3300025944 Bacteria 3217
152 Ga0207712_10021594 3300025961 Bacteria 4227
153 Ga0207677_10153854 3300026023 Bacteria 1778
154 Ga0207678_10014000 3300026067 Bacteria 7051
155 Ga0207641_10015270 3300026088 Bacteria 6294
156 Ga0207648_10001845 3300026089 Bacteria 23184
157 Ga0207648_10068628 3300026089 Bacteria 3089
158 Ga0207674_10000041 3300026116 Bacteria 129439
159 Ga0207674_10049612 3300026116 Bacteria 4292
160 Ga0207675_100011874 3300026118 Bacteria 8139
161 Ga0207428_10000065 3300027907 Bacteria 151182
162 Ga0207428_10014634 3300027907 Bacteria 6800
163 Ga0207428_10018423 3300027907 Bacteria 5964
164 Ga0207428_10019015 3300027907 Bacteria 5859
165 Ga0207428_10025992 3300027907 Bacteria 4891
166 Ga0207428_10151957 3300027907 Bacteria 1762
167 Ga0268265_10122586 3300028380 Bacteria 2144
168 Ga0268265_10189747 3300028380 Bacteria 1773
169 Ga0268264_10201960 3300028381 Bacteria 1819
170 Ga0307515_10323331 3300028794 Bacteria 1207
171 Ga0316577_10034130 3300031733 Bacteria 2843
172 Ga0307413_10106824 3300031824 Bacteria 1864
173 Ga0307416_100290724 3300032002 Bacteria 1618
174 Ga0316585_10020595 3300032137 Bacteria 2020
175 Ga0373937_0094469 3300036401 Bacteria 2773
176 Ga0373937_0199084 3300036401 Bacteria 1883
177 Ga0316582_0020073 3300036647 Bacteria 3923
178 Ga0316582_0027597 3300036647 Bacteria 3431
179 Ga0316584_0001595 3300036712 Bacteria 13782
180 Ga0373925_0659971 3300037068 Bacteria 862
181 Ga0436360_0786698 3300039438 Bacteria 2409
182 Ga0436361_0915484 3300039447 Bacteria 1676
183 Ga0436363_1180993 3300039450 Bacteria 9300
184 Ga0436363_1352259 3300039450 Bacteria 1937
185 Ga0436363_1656816 3300039450 Bacteria 2823
186 Ga0436362_1283940 3300039453 Unclassified 1618
187 Ga0451837_0504696 3300041494 Bacteria 1589
188 Ga0439446_0019618 3300042156 Bacteria 1901
189 Ga0451577_0193420 3300042876 Bacteria 1835
190 Ga0466972_0025228 3300044658 Unclassified 2948
191 Ga0451576_0120274 3300045051 Bacteria 2734
192 Ga0451576_0535877 3300045051 Bacteria 1230
193 Ga0466958_0081764 3300045836 Bacteria 1988
194 Ga0495627_000064 3300046453 Bacteria 132648
195 Ga0495638_0015846 3300046460 Bacteria 5051
196 Ga0495653_0007105 3300046463 Bacteria 9178
197 Ga0495631_0000519 3300046518 Bacteria 25886
198 Ga0495632_0010639 3300046519 Bacteria 5429
199 Ga0495654_0054641 3300046530 Bacteria 1936
200 Ga0495657_0179285 3300046675 Bacteria 1301
201 Ga0495669_0115837 3300046684 Bacteria 1254
202 Ga0495674_0041476 3300047319 Bacteria 4111
203 Ga0495674_0124510 3300047319 Bacteria 2176
204 Ga0495672_0000911 3300047320 Bacteria 30934
205 Ga0495672_0002483 3300047320 Bacteria 16901
206 Ga0496104_0197792 3300048907 Bacteria 1922
207 Ga0496104_0208363 3300048907 Bacteria 1867
208 Ga0496105_0283132 3300048908 Bacteria 1336
209 Ga0496111_0191120 3300048914 Bacteria 1522
210 Ga0496113_0245538 3300048916 Bacteria 1429
211 Ga0496114_0004022 3300048917 Bacteria 11359
212 Ga0496114_0257600 3300048917 Bacteria 1536
213 Ga0496122_0020599 3300048925 Bacteria 5947
214 Ga0496123_0016804 3300048926 Bacteria 5917
215 Ga0496125_0040858 3300048928 Bacteria 3972
216 Ga0501031_0001293 3300049568 Bacteria 15328
217 Ga0501032_0000406 3300049569 Bacteria 35558
218 Ga0501033_0131667 3300049570 Bacteria 1811
219 Ga0501034_0006809 3300049571 Bacteria 12225
220 Ga0501036_0297888 3300049572 Bacteria 1349
221 Ga0501037_0001182 3300049573 Bacteria 19278
222 Ga0501038_0006377 3300049574 Bacteria 10920
223 Ga0501039_0006716 3300049575 Bacteria 8752
224 Ga0501039_0253048 3300049575 Bacteria 1385
225 Ga0501040_0164235 3300049576 Bacteria 1570
226 Ga0501042_0057971 3300049578 Bacteria 2764
227 Ga0501042_0095625 3300049578 Bacteria 2134
228 Ga0501042_0182124 3300049578 Bacteria 1516
229 Ga0501043_0000788 3300049579 Bacteria 28179
230 Ga0501046_0004528 3300049580 Bacteria 12594
231 Ga0501046_0088035 3300049580 Bacteria 2392
232 Ga0501047_0010289 3300049581 Bacteria 8846
233 Ga0501048_0049063 3300049582 Bacteria 3010
234 Ga0501070_0117286 3300049586 Bacteria 2199
235 Ga0501071_0125694 3300049587 Bacteria 1903
236 Ga0501072_0039963 3300049588 Bacteria 3683
237 Ga0501073_0003764 3300049589 Bacteria 11399
238 Ga0501075_0065533 3300049591 Bacteria 2741
239 Ga0501075_0130579 3300049591 Bacteria 1914
240 Ga0501075_0273508 3300049591 Bacteria 1287
241 Ga0501076_0184269 3300049592 Bacteria 1702
242 Ga0501076_0207623 3300049592 Bacteria 1600
243 Ga0501076_0327394 3300049592 Bacteria 1257
244 Ga0501076_0332347 3300049592 Unclassified 1247
245 Ga0501077_0015251 3300049593 Bacteria 4835
246 Ga0501079_0111178 3300049741 Bacteria 2129
247 Ga0501079_0196467 3300049741 Unclassified 1575
248 Ga0501080_0043288 3300049742 Bacteria 4193
249 Ga0501035_0011753 3300049822 Bacteria 8109
250 nmdc:mga03683_19263_c1 3300050489 Bacteria 2603
251 nmdc:mga00v17_1505_c1 3300050491 Bacteria 12163
252 nmdc:mga00v17_164648_c1 3300050491 Bacteria 1429
253 nmdc:mga00v17_36549_c1 3300050491 Bacteria 2928
254 nmdc:mga00v17_41770_c1 3300050491 Bacteria 2755
255 nmdc:mga0yw44_81579_c1 3300050492 Bacteria 2028
256 nmdc:mga0k408_176_c1 3300050493 Bacteria 33630
257 nmdc:mga06z11_5460_c1 3300050494 Bacteria 5102
258 nmdc:mga06z11_84831_c1 3300050494 Bacteria 1707
259 nmdc:mga05p37_129263_c1 3300050507 Bacteria 3100
260 nmdc:mga05p37_199501_c1 3300050507 Bacteria 2424
261 nmdc:mga05p37_26275_c1 3300050507 Bacteria 7080
262 nmdc:mga05p37_28415_c1 3300050507 Bacteria 6820
263 nmdc:mga05p37_9753_c1 3300050507 Bacteria 11389
264 nmdc:mga05p37_9_c1 3300050507 Bacteria 151480
265 nmdc:mga09592_524059_c1 3300050508 Bacteria 1019
266 nmdc:mga09592_76060_c1 3300050508 Bacteria 2855
267 nmdc:mga0qj67_4641_c1 3300050509 Bacteria 4525
268 nmdc:mga06r32_448112_c1 3300050510 Bacteria 1270
269 nmdc:mga06r32_58014_c1 3300050510 Bacteria 3720
270 nmdc:mga06r32_9819_c1 3300050510 Bacteria 8635
271 nmdc:mga08y16_111504_c1 3300050511 Bacteria 2848
272 nmdc:mga08y16_134011_c1 3300050511 Bacteria 2575
273 nmdc:mga08y16_23391_c1 3300050511 Bacteria 6528
274 nmdc:mga08y16_27772_c1 3300050511 Bacteria 5964
275 nmdc:mga08y16_443150_c1 3300050511 Bacteria 1325
276 nmdc:mga08y16_56073_c1 3300050511 Bacteria 4119
277 nmdc:mga08y16_640042_c1 3300050511 Bacteria 1068
278 nmdc:mga08y16_85057_c1 3300050511 Bacteria 3296
279 nmdc:mga0n895_67963_c1 3300050512 Bacteria 3529
280 nmdc:mga0rr50_266520_c1 3300050513 Bacteria 1426
281 nmdc:mga0a205_119428_c1 3300050515 Bacteria 2535
282 nmdc:mga0a205_25505_c1 3300050515 Bacteria 5632
283 nmdc:mga0a205_30833_c1 3300050515 Bacteria 5135
284 Ga0495601_0325677 3300053077 Bacteria 1000
285 Ga0495612_0039893 3300053078 Bacteria 1911
286 Ga0495612_0060190 3300053078 Bacteria 1572
287 Ga0495619_0077643 3300053085 Bacteria 2231
288 Ga0500556_0003231 3300053104 Bacteria 4850
289 Ga0500659_0000968 3300053135 Bacteria 18498
290 Ga0501082_0252977 3300060353 Bacteria 1533
291 Ga0530510_0052217 3300061734 Bacteria 2954
292 2919514743 2919513703 Bacteria 3844312
293 2919677476 2919675420 Bacteria 3969095
294 Ga0065707_10153692
295 Ga0065712_10079190
296 Ga0070683_100014479
297 Ga0070683_100321098
298 Ga0070683_100334689
299 Ga0070690_100037017
300 Ga0070677_10056986
301 Ga0068869_100031499
302 Ga0070666_10112855
303 Ga0068868_100032378
304 Ga0070689_100007056
305 Ga0070691_10008247
306 Ga0070668_100042125
307 Ga0070673_100263518
308 Ga0070688_100026430
309 Ga0070688_100150877
310 Ga0070714_100409077
311 Ga0070713_100014482
312 Ga0070694_100075008
313 Ga0070708_100017531
314 Ga0070708_100024533
315 Ga0070681_10068513
316 Ga0068867_100255097
317 Ga0070685_10071843
318 Ga0070706_100000261
319 Ga0070706_100043652
320 Ga0070706_100087622
321 Ga0070706_100127029
322 Ga0070707_100008910
323 Ga0070707_100390967
324 Ga0070707_100440522
325 Ga0070707_100640618
326 Ga0070698_100002589
327 Ga0070698_100087476
328 Ga0070698_100146802
329 Ga0070699_100000775
330 Ga0070699_100020249
331 Ga0070699_100134727
332 Ga0070684_100087002
333 Ga0070684_100194129
334 Ga0070697_100052221
335 Ga0070697_100202094
336 Ga0070697_100229081
337 Ga0070697_100443933
338 Ga0070695_100014247
339 Ga0070704_100057862
340 Ga0070704_100098706
341 Ga0070704_100387502
342 Ga0068855_100030329
343 Ga0070664_100066668
344 Ga0068857_100038799
345 Ga0068859_100000016
346 Ga0068859_100005982
347 Ga0068859_100272179
348 Ga0068864_100105500
349 Ga0068866_10121271
350 Ga0068870_10029130
351 Ga0068863_100018015
352 Ga0068858_100014373
353 Ga0068860_100038377
354 Ga0068862_100057845
355 Ga0068862_100069535
356 Ga0075365_10016617
357 Ga0075368_10070708
358 Ga0075363_100056877
359 Ga0075363_100259470
360 Ga0075364_10000167
361 Ga0075364_10015598
362 Ga0075364_10114224
363 Ga0075364_10128170
364 Ga0075367_10045694
365 Ga0075366_10000103
366 Ga0075370_10024310
367 Ga0068871_100081696
368 Ga0068871_100195040
369 Ga0075428_100002121
370 Ga0075428_100030067
371 Ga0075428_100046297
372 Ga0075430_100096574
373 Ga0075431_100001459
374 Ga0075431_100063452
375 Ga0075433_10057145
376 Ga0075433_10087928
377 Ga0075433_10121629
378 Ga0075434_100138434
379 Ga0075434_100435264
380 Ga0068865_100016259
381 Ga0097620_100000016
382 Ga0097620_100005981
383 Ga0097620_100272181
384 Ga0075435_100066284
385 Ga0105244_10018407
386 Ga0105250_10004797
387 Ga0111539_10004633
388 Ga0111539_10005012
389 Ga0111539_10008044
390 Ga0111539_10020021
391 Ga0111539_10034718
392 Ga0111539_10131372
393 Ga0111539_10308777
394 Ga0114129_10000313
395 Ga0114129_10033847
396 Ga0114129_10037831
397 Ga0114129_10057776
398 Ga0114129_10139731
399 Ga0114129_10235937
400 Ga0105241_10515093
401 Ga0105242_10186300
402 Ga0105248_10108966
403 Ga0105248_10288764
404 Ga0105237_10655337
405 Ga0157369_10010114
406 Ga0157378_10288905
407 Ga0163162_10579857
408 Ga0157375_10079987
409 Ga0157380_10051840
410 Ga0157380_10052875
411 Ga0157380_10255678
412 Ga0157377_10212694
413 Ga0163161_10113037
414 Ga0206356_11151818
415 Ga0213874_10000438
416 Ga0209051_1022617
417 Ga0207696_1005517
418 Ga0207713_1008700
419 Ga0207682_10016152
420 Ga0207642_10099207
421 Ga0207688_10116063
422 Ga0207643_10035047
423 Ga0207684_10027407
424 Ga0207684_10042534
425 Ga0207684_10071548
426 Ga0207684_10158687
427 Ga0207707_10171408
428 Ga0207660_10355272
429 Ga0207662_10000915
430 Ga0207646_10009158
431 Ga0207646_10012136
432 Ga0207646_10076377
433 Ga0207646_10305720
434 Ga0207681_10112078
435 Ga0207659_10041424
436 Ga0207700_10008131
437 Ga0207664_10434788
438 Ga0207709_10027837
439 Ga0207704_10070699
440 Ga0207665_10329890
441 Ga0207689_10019619
442 Ga0207661_10026218
443 Ga0207661_10041376
444 Ga0207661_10054021
445 Ga0207712_10021594
446 Ga0207677_10153854
447 Ga0207678_10014000
448 Ga0207641_10015270
449 Ga0207648_10001845
450 Ga0207648_10068628
451 Ga0207674_10000041
452 Ga0207674_10049612
453 Ga0207675_100011874
454 Ga0207428_10000065
455 Ga0207428_10014634
456 Ga0207428_10018423
457 Ga0207428_10019015
458 Ga0207428_10025992
459 Ga0207428_10151957
460 Ga0268265_10122586
461 Ga0268265_10189747
462 Ga0268264_10201960
463 Ga0307515_10323331
464 Ga0316577_10034130
465 Ga0307413_10106824
466 Ga0307416_100290724
467 Ga0316585_10020595
468 Ga0373937_0094469
469 Ga0373937_0199084
470 Ga0316582_0020073
471 Ga0316582_0027597
472 Ga0316584_0001595
473 Ga0373925_0659971
474 Ga0436360_0786698
475 Ga0436361_0915484
476 Ga0436363_1180993
477 Ga0436363_1352259
478 Ga0436363_1656816
479 Ga0436362_1283940
480 Ga0451837_0504696
481 Ga0439446_0019618
482 Ga0451577_0193420
483 Ga0466972_0025228
484 Ga0451576_0120274
485 Ga0451576_0535877
486 Ga0466958_0081764
487 Ga0495627_000064
488 Ga0495638_0015846
489 Ga0495653_0007105
490 Ga0495631_0000519
491 Ga0495632_0010639
492 Ga0495654_0054641
493 Ga0495657_0179285
494 Ga0495669_0115837
495 Ga0495674_0041476
496 Ga0495674_0124510
497 Ga0495672_0000911
498 Ga0495672_0002483
499 Ga0496104_0197792
500 Ga0496104_0208363
501 Ga0496105_0283132
502 Ga0496111_0191120
503 Ga0496113_0245538
504 Ga0496114_0004022
505 Ga0496114_0257600
506 Ga0496122_0020599
507 Ga0496123_0016804
508 Ga0496125_0040858
509 Ga0501031_0001293
510 Ga0501032_0000406
511 Ga0501033_0131667
512 Ga0501034_0006809
513 Ga0501036_0297888
514 Ga0501037_0001182
515 Ga0501038_0006377
516 Ga0501039_0006716
517 Ga0501039_0253048
518 Ga0501040_0164235
519 Ga0501042_0057971
520 Ga0501042_0095625
521 Ga0501042_0182124
522 Ga0501043_0000788
523 Ga0501046_0004528
524 Ga0501046_0088035
525 Ga0501047_0010289
526 Ga0501048_0049063
527 Ga0501070_0117286
528 Ga0501071_0125694
529 Ga0501072_0039963
530 Ga0501073_0003764
531 Ga0501075_0065533
532 Ga0501075_0130579
533 Ga0501075_0273508
534 Ga0501076_0184269
535 Ga0501076_0207623
536 Ga0501076_0327394
537 Ga0501076_0332347
538 Ga0501077_0015251
539 Ga0501079_0111178
540 Ga0501079_0196467
541 Ga0501080_0043288
542 Ga0501035_0011753
543 nmdc:mga03683_19263_c1
544 nmdc:mga00v17_1505_c1
545 nmdc:mga00v17_164648_c1
546 nmdc:mga00v17_36549_c1
547 nmdc:mga00v17_41770_c1
548 nmdc:mga0yw44_81579_c1
549 nmdc:mga0k408_176_c1
550 nmdc:mga06z11_5460_c1
551 nmdc:mga06z11_84831_c1
552 nmdc:mga05p37_129263_c1
553 nmdc:mga05p37_199501_c1
554 nmdc:mga05p37_26275_c1
555 nmdc:mga05p37_28415_c1
556 nmdc:mga05p37_9753_c1
557 nmdc:mga05p37_9_c1
558 nmdc:mga09592_524059_c1
559 nmdc:mga09592_76060_c1
560 nmdc:mga0qj67_4641_c1
561 nmdc:mga06r32_448112_c1
562 nmdc:mga06r32_58014_c1
563 nmdc:mga06r32_9819_c1
564 nmdc:mga08y16_111504_c1
565 nmdc:mga08y16_134011_c1
566 nmdc:mga08y16_23391_c1
567 nmdc:mga08y16_27772_c1
568 nmdc:mga08y16_443150_c1
569 nmdc:mga08y16_56073_c1
570 nmdc:mga08y16_640042_c1
571 nmdc:mga08y16_85057_c1
572 nmdc:mga0n895_67963_c1
573 nmdc:mga0rr50_266520_c1
574 nmdc:mga0a205_119428_c1
575 nmdc:mga0a205_25505_c1
576 nmdc:mga0a205_30833_c1
577 Ga0495601_0325677
578 Ga0495612_0039893
579 Ga0495612_0060190
580 Ga0495619_0077643
581 Ga0500556_0003231
582 Ga0500659_0000968
583 Ga0501082_0252977
584 Ga0530510_0052217
585 2919514743
586 2919677476

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

20

293

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mp5-assembly2.cif.gz_C crystal structure of human lyase r41m in complex with hmg-coa 0.9897 1 293
2cw6-assembly1.cif.gz_A crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9879 1 294
2cw6-assembly2.cif.gz_D crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9872 1 293
3mp5-assembly2.cif.gz_D crystal structure of human lyase r41m in complex with hmg-coa 0.9871 1 293
3mp5-assembly3.cif.gz_E crystal structure of human lyase r41m in complex with hmg-coa 0.9869 1 294
ID Description Score Start End Superfamily
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9864 1 297 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9799 2 295 3.20.20.70
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9702 1 297 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9667 2 295 3.20.20.70
af_Q4DIQ4_8_322_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9296 3 284 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7S2C770-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.999 1 183 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-S9QPD6-F1-model_v4 Isopropylmalate/homocitrate/citramalate synthase 0.9968 5 169 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A0D2VKT3-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9966 1 184 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A452QYN2-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9965 1 206 GO:0000287
GO:0004419
GO:0005198
GO:0005739
GO:0005777
GO:0006552
GO:0007005
GO:0030145
GO:0032991
GO:0046951
AF-A0A176FCJ6-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9962 1 222 GO:0004419
GO:0006552
GO:0046872
GO:0046951

Map