F390384

General Info

Members Datasets Scaffolds Average Seq Length
291 196 582 303

Family's Representative Sequence

Representative Sequence 3300025928|Ga0207700_10405032|Ga0207700_104050321
Length 339
Sequence MWRVVTAVCCGSSRQPSMPGPWTCQQRPGSSIVTLWAWGDLATIALKIDVDTFRGTREGVPRLAHVLTQVGARATFLFSVGPDHTGRAIKRVFRPGFMGKVKRTSVVEHYGLKTLMYGVLLPGPHIGRRCRSFMHDIARAGFEVGVHTYDHIKWQDSVARASEPWTRRELTLALDEFVEIFGQRPSVHGAAGWQVNEYVPALEQQLGFRYASDTRGVCPFVPVVGGVEVAVPQLPTTLPTLDELIGRPDLEGVDPVDHLLALTTQDEQRDHVFTLHAELEGGAYLQSFERLLRTWRARGVQLTDLVTYAGTLDINKLPRCKIVEGSVPGRSGVLALQAH

Samples

Sample ID Description Type Environment
1 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
116 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
117 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
124 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
128 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
129 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
130 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
136 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
153 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
179 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
186 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
187 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
188 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
189 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
190 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
191 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
192 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
193 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
194 2904424332 Duganella sp. 1411 Isolate Rhizosphere
195 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
196 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.88
Metatranscriptomes 0.69
Isolates 3.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.75
Nodule 1.37
Rhizoplane 7.22
Rhizosphere 81.1
Stem 0
Stem Tuber 0
Unclassified 5.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207700_10405032 3300025928 Bacteria 1196
2 JGI25151J46595_10016630 3300003187 Bacteria 3211
3 JGI25151J46595_10037429 3300003187 Bacteria 1820
4 rootH2_10090555 3300003320 Bacteria 1314
5 Ga0055526_1004070 3300003771 Bacteria 8966
6 Ga0065714_10076354 3300005288 Bacteria 2800
7 Ga0070690_100155137 3300005330 Bacteria 1565
8 Ga0068869_100089371 3300005334 Unclassified 2313
9 Ga0070666_10003758 3300005335 Bacteria 9204
10 Ga0070666_10020817 3300005335 Bacteria 4243
11 Ga0070680_100001606 3300005336 Bacteria 16503
12 Ga0070680_100008060 3300005336 Bacteria 8044
13 Ga0070680_100066224 3300005336 Bacteria 2962
14 Ga0068868_100190358 3300005338 Bacteria 1706
15 Ga0070673_100050122 3300005364 Bacteria 3263
16 Ga0070667_100002140 3300005367 Bacteria 17388
17 Ga0070667_100019464 3300005367 Bacteria 5632
18 Ga0070667_100111928 3300005367 Bacteria 2368
19 Ga0070667_100366320 3300005367 Bacteria 1307
20 Ga0070709_10013155 3300005434 Bacteria 4646
21 Ga0070709_10028158 3300005434 Bacteria 3348
22 Ga0070714_100150186 3300005435 Bacteria 2099
23 Ga0070713_100005736 3300005436 Bacteria 8525
24 Ga0070713_100052011 3300005436 Bacteria 3390
25 Ga0070713_100089385 3300005436 Unclassified 2645
26 Ga0070711_100012610 3300005439 Bacteria 5285
27 Ga0070711_100025712 3300005439 Bacteria 3854
28 Ga0070681_10005159 3300005458 Bacteria 12603
29 Ga0070679_100007972 3300005530 Bacteria 9940
30 Ga0070679_100024661 3300005530 Bacteria 5895
31 Ga0070679_100066734 3300005530 Bacteria 3587
32 Ga0070679_100075460 3300005530 Bacteria 3361
33 Ga0070679_100234381 3300005530 Unclassified 1795
34 Ga0070684_100082195 3300005535 Bacteria 2851
35 Ga0070686_100130816 3300005544 Bacteria 1735
36 Ga0070695_100017285 3300005545 Bacteria 4373
37 Ga0070695_100036202 3300005545 Bacteria 3105
38 Ga0070696_100003153 3300005546 Bacteria 10977
39 Ga0070693_100191025 3300005547 Bacteria 1324
40 Ga0070665_100003090 3300005548 Bacteria 17922
41 Ga0068855_100003213 3300005563 Bacteria 19993
42 Ga0068855_100011746 3300005563 Bacteria 10588
43 Ga0068855_100066102 3300005563 Bacteria 4215
44 Ga0068856_100652813 3300005614 Bacteria 1073
45 Ga0068866_10061769 3300005718 Bacteria 1947
46 Ga0068858_100052428 3300005842 Bacteria 3774
47 Ga0068858_100115447 3300005842 Bacteria 2509
48 Ga0068860_100045617 3300005843 Bacteria 4180
49 Ga0068860_100441778 3300005843 Bacteria 1292
50 Ga0070717_10008062 3300006028 Bacteria 7853
51 Ga0070716_100023279 3300006173 Bacteria 3283
52 Ga0070716_100045696 3300006173 Bacteria 2460
53 Ga0070712_100354791 3300006175 Unclassified 1201
54 Ga0097621_100084991 3300006237 Bacteria 2638
55 Ga0097621_100115930 3300006237 Bacteria 2268
56 Ga0097621_100139959 3300006237 Bacteria 2067
57 Ga0075428_100026372 3300006844 Bacteria 6433
58 Ga0075430_100074862 3300006846 Bacteria 2839
59 Ga0075431_100000024 3300006847 Bacteria 79167
60 Ga0075429_100001163 3300006880 Bacteria 21243
61 Ga0068865_100037528 3300006881 Bacteria 3272
62 Ga0068865_100413145 3300006881 Bacteria 1108
63 Ga0099826_10000021 3300006948 Bacteria 173580
64 Ga0105251_10076280 3300009011 Bacteria 1556
65 Ga0105244_10040932 3300009036 Bacteria 2403
66 Ga0105240_10003920 3300009093 Bacteria 22981
67 Ga0105240_10004348 3300009093 Bacteria 21630
68 Ga0105240_10084377 3300009093 Bacteria 3895
69 Ga0105240_10104524 3300009093 Bacteria 3439
70 Ga0105240_10121526 3300009093 Bacteria 3144
71 Ga0105240_10444387 3300009093 Bacteria 1452
72 Ga0111539_10000102 3300009094 Bacteria 91214
73 Ga0111539_10037440 3300009094 Bacteria 5858
74 Ga0105245_10071576 3300009098 Bacteria 3149
75 Ga0105245_10377540 3300009098 Bacteria 1411
76 Ga0105247_10009793 3300009101 Bacteria 5807
77 Ga0114129_10061602 3300009147 Bacteria 5244
78 Ga0105241_10008348 3300009174 Bacteria 7627
79 Ga0105242_10002729 3300009176 Bacteria 13813
80 Ga0105242_10039798 3300009176 Bacteria 3785
81 Ga0105248_10054689 3300009177 Bacteria 4477
82 Ga0105237_10029930 3300009545 Bacteria 5531
83 Ga0105237_10040110 3300009545 Bacteria 4723
84 Ga0105237_10060728 3300009545 Unclassified 3780
85 Ga0105237_10114471 3300009545 Bacteria 2690
86 Ga0105238_10051592 3300009551 Unclassified 4137
87 Ga0105239_10083826 3300010375 Bacteria 3511
88 Ga0157369_10024728 3300013105 Bacteria 6675
89 Ga0157369_10035119 3300013105 Bacteria 5499
90 Ga0157374_10022536 3300013296 Bacteria 5619
91 Ga0157374_10162411 3300013296 Unclassified 2176
92 Ga0157378_10017391 3300013297 Bacteria 6309
93 Ga0157375_10012966 3300013308 Bacteria 7403
94 Ga0157375_10134657 3300013308 Unclassified 2593
95 Ga0163163_10188341 3300014325 Bacteria 2112
96 Ga0163163_10265507 3300014325 Bacteria 1767
97 Ga0182008_10003181 3300014497 Bacteria 10043
98 Ga0157379_10039878 3300014968 Bacteria 4191
99 Ga0157379_10054014 3300014968 Bacteria 3589
100 Ga0157379_10373939 3300014968 Bacteria 1307
101 Ga0157376_10061916 3300014969 Unclassified 3147
102 Ga0157376_10081804 3300014969 Bacteria 2773
103 Ga0182006_1000002 3300015261 Bacteria 887990
104 Ga0182007_10000090 3300015262 Bacteria 66706
105 Ga0182005_1000070 3300015265 Bacteria 85687
106 Ga0163161_10012077 3300017792 Bacteria 5991
107 Ga0163161_10037307 3300017792 Bacteria 3484
108 Ga0213872_10046434 3300021361 Bacteria 1976
109 Ga0213874_10001617 3300021377 Bacteria 4727
110 Ga0209025_1014012 3300025294 Bacteria 4981
111 Ga0209051_1042175 3300025303 Bacteria 1615
112 Ga0207710_10036084 3300025900 Bacteria 2178
113 Ga0207699_10041628 3300025906 Bacteria 2655
114 Ga0207699_10069862 3300025906 Bacteria 2143
115 Ga0207654_10105062 3300025911 Bacteria 1747
116 Ga0207707_10002142 3300025912 Bacteria 17880
117 Ga0207695_10006575 3300025913 Bacteria 15036
118 Ga0207695_10009965 3300025913 Bacteria 11674
119 Ga0207695_10059030 3300025913 Bacteria 3980
120 Ga0207695_10182123 3300025913 Bacteria 2021
121 Ga0207695_10440667 3300025913 Bacteria 1186
122 Ga0207671_10064159 3300025914 Unclassified 2730
123 Ga0207671_10277194 3300025914 Bacteria 1322
124 Ga0207671_10501293 3300025914 Bacteria 968
125 Ga0207693_10000081 3300025915 Bacteria 86034
126 Ga0207663_10142557 3300025916 Bacteria 1671
127 Ga0207663_10239725 3300025916 Bacteria 1329
128 Ga0207660_10023364 3300025917 Bacteria 4175
129 Ga0207662_10398017 3300025918 Bacteria 933
130 Ga0207652_10016833 3300025921 Bacteria 5976
131 Ga0207652_10026898 3300025921 Bacteria 4794
132 Ga0207652_10035260 3300025921 Bacteria 4221
133 Ga0207652_10188420 3300025921 Bacteria 1855
134 Ga0207681_10129824 3300025923 Unclassified 1862
135 Ga0207694_10030685 3300025924 Unclassified 4104
136 Ga0207687_10046153 3300025927 Bacteria 3015
137 Ga0207700_10009585 3300025928 Bacteria 6062
138 Ga0207686_10077194 3300025934 Bacteria 2162
139 Ga0207686_10273677 3300025934 Bacteria 1243
140 Ga0207704_10016804 3300025938 Bacteria 3772
141 Ga0207704_10148563 3300025938 Bacteria 1650
142 Ga0207665_10031889 3300025939 Bacteria 3488
143 Ga0207661_10263428 3300025944 Bacteria 1536
144 Ga0207667_10036181 3300025949 Bacteria 5293
145 Ga0207667_10082248 3300025949 Unclassified 3336
146 Ga0207658_10000149 3300025986 Bacteria 73242
147 Ga0207703_10146736 3300026035 Bacteria 2053
148 Ga0207703_10203449 3300026035 Bacteria 1761
149 Ga0207702_10472683 3300026078 Bacteria 1219
150 Ga0207641_10058533 3300026088 Unclassified 3279
151 Ga0207641_10330940 3300026088 Bacteria 1447
152 Ga0207675_100024366 3300026118 Bacteria 5627
153 Ga0209282_1000019 3300027666 Bacteria 184034
154 Ga0207428_10033991 3300027907 Bacteria 4181
155 Ga0207428_10148518 3300027907 Bacteria 1785
156 Ga0268266_10004857 3300028379 Bacteria 12751
157 Ga0265338_10001076 3300028800 Bacteria 45292
158 Ga0265770_1001146 3300030878 Bacteria 3663
159 Ga0265760_10004073 3300031090 Bacteria 4212
160 Ga0265340_10077692 3300031247 Bacteria 1566
161 Ga0307509_10000001 3300031507 Bacteria 629324
162 Ga0316575_10002160 3300031665 Bacteria 6563
163 Ga0307414_10167759 3300032004 Bacteria 1751
164 Ga0373933_0119008 3300035724 Bacteria 1653
165 Ga0373947_0119648 3300035725 Bacteria 1672
166 Ga0373925_0026611 3300037068 Bacteria 4233
167 Ga0395899_0154366 3300037312 Bacteria 1625
168 Ga0395900_0078009 3300037418 Bacteria 3404
169 Ga0395898_0139948 3300037466 Bacteria 2317
170 Ga0395898_0250561 3300037466 Bacteria 1689
171 Ga0436365_1779381 3300039437 Bacteria 2792
172 Ga0436363_0141791 3300039450 Bacteria 6171
173 Ga0436363_1037748 3300039450 Bacteria 3900
174 Ga0451800_0788528 3300041459 Bacteria 1191
175 Ga0466969_0015234 3300044656 Unclassified 4030
176 Ga0466969_0020884 3300044656 Bacteria 3387
177 Ga0466966_0001223 3300044684 Bacteria 16480
178 Ga0466966_0128605 3300044684 Bacteria 1552
179 Ga0466961_0000690 3300044693 Bacteria 21333
180 Ga0466964_0004134 3300044706 Bacteria 5337
181 Ga0466968_0064371 3300044735 Bacteria 1586
182 Ga0466970_0007209 3300044765 Bacteria 5569
183 Ga0466957_0002485 3300044842 Bacteria 9907
184 Ga0466959_0001645 3300045049 Bacteria 13814
185 Ga0466959_0030531 3300045049 Unclassified 3990
186 Ga0466959_0036683 3300045049 Bacteria 3622
187 Ga0466958_0090350 3300045836 Bacteria 1895
188 Ga0495603_0013586 3300046455 Bacteria 4926
189 Ga0495580_0003050 3300046472 Bacteria 14345
190 Ga0495580_0133482 3300046472 Bacteria 1721
191 Ga0495582_0089779 3300046473 Bacteria 1713
192 Ga0495605_0010159 3300046474 Bacteria 5271
193 Ga0495639_0089870 3300046475 Bacteria 1440
194 Ga0495585_0001306 3300046492 Bacteria 19875
195 Ga0495596_0000533 3300046500 Bacteria 23909
196 Ga0495596_0000734 3300046500 Bacteria 20197
197 Ga0495596_0027205 3300046500 Bacteria 2301
198 Ga0495607_0009087 3300046501 Bacteria 6755
199 Ga0495610_0000545 3300046512 Bacteria 37663
200 Ga0495610_0012752 3300046512 Bacteria 5033
201 Ga0495610_0017089 3300046512 Bacteria 4147
202 Ga0495610_0047497 3300046512 Bacteria 2111
203 Ga0495618_0256751 3300046514 Bacteria 1095
204 Ga0495628_0393162 3300046516 Bacteria 1014
205 Ga0495643_0005413 3300046522 Bacteria 8642
206 Ga0495643_0036459 3300046522 Bacteria 2701
207 Ga0495644_0019612 3300046523 Bacteria 2582
208 Ga0495665_0023982 3300046531 Bacteria 3278
209 Ga0495609_0027862 3300046538 Bacteria 2580
210 Ga0495609_0046230 3300046538 Bacteria 1949
211 Ga0495621_0005138 3300046539 Bacteria 3741
212 Ga0495633_0003574 3300046558 Bacteria 10280
213 Ga0495633_0067615 3300046558 Bacteria 1668
214 Ga0495668_0051029 3300046616 Bacteria 2291
215 Ga0495611_0105672 3300046648 Bacteria 1309
216 Ga0495661_0110913 3300046665 Bacteria 1529
217 Ga0495623_0016660 3300046679 Bacteria 4747
218 Ga0495647_0141036 3300046681 Bacteria 1028
219 Ga0495670_0086213 3300046691 Bacteria 1603
220 Ga0495671_0002046 3300046692 Bacteria 12914
221 Ga0495649_0036740 3300046694 Bacteria 2690
222 Ga0495649_0045287 3300046694 Bacteria 2399
223 Ga0495589_0036908 3300046794 Bacteria 2449
224 Ga0495604_0294300 3300047317 Bacteria 1092
225 Ga0495674_0241965 3300047319 Bacteria 1487
226 Ga0495672_0040109 3300047320 Bacteria 2841
227 Ga0495672_0048318 3300047320 Bacteria 2523
228 Ga0495687_004211 3300047443 Bacteria 9868
229 Ga0495687_076333 3300047443 Bacteria 1327
230 Ga0495677_0030750 3300047445 Bacteria 1954
231 Ga0495685_006854 3300047447 Bacteria 3748
232 Ga0495673_0015212 3300047469 Bacteria 3971
233 Ga0495681_0093649 3300047470 Bacteria 1323
234 Ga0495602_0104885 3300048088 Bacteria 2312
235 Ga0496100_0076913 3300048903 Bacteria 2242
236 Ga0496102_0051798 3300048905 Bacteria 3739
237 Ga0496102_0057436 3300048905 Bacteria 3553
238 Ga0496102_0308629 3300048905 Bacteria 1491
239 Ga0496103_0007905 3300048906 Bacteria 6326
240 Ga0496103_0083275 3300048906 Bacteria 2014
241 Ga0496104_0220562 3300048907 Bacteria 1808
242 Ga0496106_0032552 3300048909 Bacteria 3888
243 Ga0496106_0072068 3300048909 Bacteria 2642
244 Ga0496108_0052109 3300048911 Bacteria 3428
245 Ga0496109_0090225 3300048912 Bacteria 2834
246 Ga0496110_0007798 3300048913 Bacteria 8578
247 Ga0496110_0032129 3300048913 Bacteria 4531
248 Ga0496111_0182892 3300048914 Unclassified 1558
249 Ga0496112_0203171 3300048915 Bacteria 1940
250 Ga0496113_0238491 3300048916 Bacteria 1451
251 Ga0496114_0068846 3300048917 Bacteria 2971
252 Ga0496114_0121358 3300048917 Bacteria 2248
253 Ga0496115_0008115 3300048918 Bacteria 7758
254 Ga0496116_0029721 3300048919 Bacteria 3934
255 Ga0496116_0214314 3300048919 Bacteria 994
256 Ga0496117_0000001 3300048920 Bacteria 2526244
257 Ga0496118_0000078 3300048921 Bacteria 190946
258 Ga0496118_0015547 3300048921 Bacteria 7039
259 Ga0496121_0007119 3300048924 Bacteria 13577
260 Ga0496121_0135025 3300048924 Bacteria 1839
261 Ga0496122_0037730 3300048925 Bacteria 3884
262 Ga0496122_0048246 3300048925 Bacteria 3277
263 Ga0496123_0002314 3300048926 Bacteria 23928
264 Ga0496124_0056101 3300048927 Bacteria 3324
265 Ga0496125_0089928 3300048928 Bacteria 2307
266 Ga0496126_0007747 3300048929 Bacteria 11708
267 Ga0496126_0253316 3300048929 Bacteria 1466
268 Ga0495682_0012575 3300049460 Bacteria 3242
269 Ga0501070_0144565 3300049586 Bacteria 1963
270 Ga0501080_0144468 3300049742 Bacteria 2199
271 nmdc:mga05p37_219306_c1 3300050507 Bacteria 2296
272 nmdc:mga09592_886_c1 3300050508 Bacteria 23447
273 nmdc:mga06r32_11_c1 3300050510 Bacteria 111691
274 nmdc:mga08y16_281775_c1 3300050511 Bacteria 1714
275 nmdc:mga08y16_7281_c1 3300050511 Bacteria 11613
276 nmdc:mga08y16_9136_c1 3300050511 Bacteria 10405
277 Ga0495612_0026211 3300053078 Bacteria 2343
278 Ga0500637_0001387 3300053178 Bacteria 10298
279 Ga0500637_0018147 3300053178 Bacteria 3776
280 Ga0500637_0076822 3300053178 Bacteria 1926
281 Ga0466962_0005365 3300061719 Bacteria 6168
282 2513955543 2513237150 Bacteria 6553639
283 2514040889 2513237165 Bacteria 6771773
284 2601667259 2600255292 Bacteria 6300551
285 2857552550 2857547612 Bacteria 6179999
286 2858696245 2858688981 Bacteria 8184122
287 2885085158 2885080285 Bacteria 6355622
288 2904426183 2904424332 Bacteria 7633521
289 2904426776 2904424332 Bacteria 7633521
290 2932414861 2932410948 Bacteria 6312192
291 2932419547 2932416698 Bacteria 6315112
292 Ga0207700_10405032
293 JGI25151J46595_10016630
294 JGI25151J46595_10037429
295 rootH2_10090555
296 Ga0055526_1004070
297 Ga0065714_10076354
298 Ga0070690_100155137
299 Ga0068869_100089371
300 Ga0070666_10003758
301 Ga0070666_10020817
302 Ga0070680_100001606
303 Ga0070680_100008060
304 Ga0070680_100066224
305 Ga0068868_100190358
306 Ga0070673_100050122
307 Ga0070667_100002140
308 Ga0070667_100019464
309 Ga0070667_100111928
310 Ga0070667_100366320
311 Ga0070709_10013155
312 Ga0070709_10028158
313 Ga0070714_100150186
314 Ga0070713_100005736
315 Ga0070713_100052011
316 Ga0070713_100089385
317 Ga0070711_100012610
318 Ga0070711_100025712
319 Ga0070681_10005159
320 Ga0070679_100007972
321 Ga0070679_100024661
322 Ga0070679_100066734
323 Ga0070679_100075460
324 Ga0070679_100234381
325 Ga0070684_100082195
326 Ga0070686_100130816
327 Ga0070695_100017285
328 Ga0070695_100036202
329 Ga0070696_100003153
330 Ga0070693_100191025
331 Ga0070665_100003090
332 Ga0068855_100003213
333 Ga0068855_100011746
334 Ga0068855_100066102
335 Ga0068856_100652813
336 Ga0068866_10061769
337 Ga0068858_100052428
338 Ga0068858_100115447
339 Ga0068860_100045617
340 Ga0068860_100441778
341 Ga0070717_10008062
342 Ga0070716_100023279
343 Ga0070716_100045696
344 Ga0070712_100354791
345 Ga0097621_100084991
346 Ga0097621_100115930
347 Ga0097621_100139959
348 Ga0075428_100026372
349 Ga0075430_100074862
350 Ga0075431_100000024
351 Ga0075429_100001163
352 Ga0068865_100037528
353 Ga0068865_100413145
354 Ga0099826_10000021
355 Ga0105251_10076280
356 Ga0105244_10040932
357 Ga0105240_10003920
358 Ga0105240_10004348
359 Ga0105240_10084377
360 Ga0105240_10104524
361 Ga0105240_10121526
362 Ga0105240_10444387
363 Ga0111539_10000102
364 Ga0111539_10037440
365 Ga0105245_10071576
366 Ga0105245_10377540
367 Ga0105247_10009793
368 Ga0114129_10061602
369 Ga0105241_10008348
370 Ga0105242_10002729
371 Ga0105242_10039798
372 Ga0105248_10054689
373 Ga0105237_10029930
374 Ga0105237_10040110
375 Ga0105237_10060728
376 Ga0105237_10114471
377 Ga0105238_10051592
378 Ga0105239_10083826
379 Ga0157369_10024728
380 Ga0157369_10035119
381 Ga0157374_10022536
382 Ga0157374_10162411
383 Ga0157378_10017391
384 Ga0157375_10012966
385 Ga0157375_10134657
386 Ga0163163_10188341
387 Ga0163163_10265507
388 Ga0182008_10003181
389 Ga0157379_10039878
390 Ga0157379_10054014
391 Ga0157379_10373939
392 Ga0157376_10061916
393 Ga0157376_10081804
394 Ga0182006_1000002
395 Ga0182007_10000090
396 Ga0182005_1000070
397 Ga0163161_10012077
398 Ga0163161_10037307
399 Ga0213872_10046434
400 Ga0213874_10001617
401 Ga0209025_1014012
402 Ga0209051_1042175
403 Ga0207710_10036084
404 Ga0207699_10041628
405 Ga0207699_10069862
406 Ga0207654_10105062
407 Ga0207707_10002142
408 Ga0207695_10006575
409 Ga0207695_10009965
410 Ga0207695_10059030
411 Ga0207695_10182123
412 Ga0207695_10440667
413 Ga0207671_10064159
414 Ga0207671_10277194
415 Ga0207671_10501293
416 Ga0207693_10000081
417 Ga0207663_10142557
418 Ga0207663_10239725
419 Ga0207660_10023364
420 Ga0207662_10398017
421 Ga0207652_10016833
422 Ga0207652_10026898
423 Ga0207652_10035260
424 Ga0207652_10188420
425 Ga0207681_10129824
426 Ga0207694_10030685
427 Ga0207687_10046153
428 Ga0207700_10009585
429 Ga0207686_10077194
430 Ga0207686_10273677
431 Ga0207704_10016804
432 Ga0207704_10148563
433 Ga0207665_10031889
434 Ga0207661_10263428
435 Ga0207667_10036181
436 Ga0207667_10082248
437 Ga0207658_10000149
438 Ga0207703_10146736
439 Ga0207703_10203449
440 Ga0207702_10472683
441 Ga0207641_10058533
442 Ga0207641_10330940
443 Ga0207675_100024366
444 Ga0209282_1000019
445 Ga0207428_10033991
446 Ga0207428_10148518
447 Ga0268266_10004857
448 Ga0265338_10001076
449 Ga0265770_1001146
450 Ga0265760_10004073
451 Ga0265340_10077692
452 Ga0307509_10000001
453 Ga0316575_10002160
454 Ga0307414_10167759
455 Ga0373933_0119008
456 Ga0373947_0119648
457 Ga0373925_0026611
458 Ga0395899_0154366
459 Ga0395900_0078009
460 Ga0395898_0139948
461 Ga0395898_0250561
462 Ga0436365_1779381
463 Ga0436363_0141791
464 Ga0436363_1037748
465 Ga0451800_0788528
466 Ga0466969_0015234
467 Ga0466969_0020884
468 Ga0466966_0001223
469 Ga0466966_0128605
470 Ga0466961_0000690
471 Ga0466964_0004134
472 Ga0466968_0064371
473 Ga0466970_0007209
474 Ga0466957_0002485
475 Ga0466959_0001645
476 Ga0466959_0030531
477 Ga0466959_0036683
478 Ga0466958_0090350
479 Ga0495603_0013586
480 Ga0495580_0003050
481 Ga0495580_0133482
482 Ga0495582_0089779
483 Ga0495605_0010159
484 Ga0495639_0089870
485 Ga0495585_0001306
486 Ga0495596_0000533
487 Ga0495596_0000734
488 Ga0495596_0027205
489 Ga0495607_0009087
490 Ga0495610_0000545
491 Ga0495610_0012752
492 Ga0495610_0017089
493 Ga0495610_0047497
494 Ga0495618_0256751
495 Ga0495628_0393162
496 Ga0495643_0005413
497 Ga0495643_0036459
498 Ga0495644_0019612
499 Ga0495665_0023982
500 Ga0495609_0027862
501 Ga0495609_0046230
502 Ga0495621_0005138
503 Ga0495633_0003574
504 Ga0495633_0067615
505 Ga0495668_0051029
506 Ga0495611_0105672
507 Ga0495661_0110913
508 Ga0495623_0016660
509 Ga0495647_0141036
510 Ga0495670_0086213
511 Ga0495671_0002046
512 Ga0495649_0036740
513 Ga0495649_0045287
514 Ga0495589_0036908
515 Ga0495604_0294300
516 Ga0495674_0241965
517 Ga0495672_0040109
518 Ga0495672_0048318
519 Ga0495687_004211
520 Ga0495687_076333
521 Ga0495677_0030750
522 Ga0495685_006854
523 Ga0495673_0015212
524 Ga0495681_0093649
525 Ga0495602_0104885
526 Ga0496100_0076913
527 Ga0496102_0051798
528 Ga0496102_0057436
529 Ga0496102_0308629
530 Ga0496103_0007905
531 Ga0496103_0083275
532 Ga0496104_0220562
533 Ga0496106_0032552
534 Ga0496106_0072068
535 Ga0496108_0052109
536 Ga0496109_0090225
537 Ga0496110_0007798
538 Ga0496110_0032129
539 Ga0496111_0182892
540 Ga0496112_0203171
541 Ga0496113_0238491
542 Ga0496114_0068846
543 Ga0496114_0121358
544 Ga0496115_0008115
545 Ga0496116_0029721
546 Ga0496116_0214314
547 Ga0496117_0000001
548 Ga0496118_0000078
549 Ga0496118_0015547
550 Ga0496121_0007119
551 Ga0496121_0135025
552 Ga0496122_0037730
553 Ga0496122_0048246
554 Ga0496123_0002314
555 Ga0496124_0056101
556 Ga0496125_0089928
557 Ga0496126_0007747
558 Ga0496126_0253316
559 Ga0495682_0012575
560 Ga0501070_0144565
561 Ga0501080_0144468
562 nmdc:mga05p37_219306_c1
563 nmdc:mga09592_886_c1
564 nmdc:mga06r32_11_c1
565 nmdc:mga08y16_281775_c1
566 nmdc:mga08y16_7281_c1
567 nmdc:mga08y16_9136_c1
568 Ga0495612_0026211
569 Ga0500637_0001387
570 Ga0500637_0018147
571 Ga0500637_0076822
572 Ga0466962_0005365
573 2513955543
574 2514040889
575 2601667259
576 2857552550
577 2858696245
578 2885085158
579 2904426183
580 2904426776
581 2932414861
582 2932419547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01522

Polysacc_deac_1

Polysaccharide deacetylase

42

211

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8t0j-assembly1.cif.gz_A salmonella typhimurium arnd 0.9237 1 295
8t0j-assembly1.cif.gz_A salmonella typhimurium arnd 0.9072 1 295
7bkf-assembly1.cif.gz_A crystal structure of wt ba3943, a ce4 family pseudoenzyme from bacillus anthracis 0.8648 3 265
6hm9-assembly1.cif.gz_A crystal structure of a ba3943 mutant,a ce4 family pseudoenzyme with restored enzymatic activity. 0.864 3 265
2y8u-assembly1.cif.gz_A a. nidulans chitin deacetylase 0.8191 3 265
ID Description Score Start End Superfamily
af_P76472_1_267_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8667 1 265 3.30.70.260
af_P76472_1_267_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8542 1 265 3.30.70.260
af_P9WLV3_5_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.828 1 39 3.90.550.10
2y8uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8191 3 265 3.20.20.370
5lgcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.801 2 271 3.20.20.370
ID Description Score Start End GO Terms
AF-A0A2Z6TLQ1-F1-model_v4 deleted 0.9911 2 296
AF-A0A3B9NZ29-F1-model_v4 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase 0.9818 1 295 GO:0005975
GO:0016810
AF-A0A2M7C0R3-F1-model_v4 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase 0.9805 1 262 GO:0005975
GO:0016810
AF-T1C747-F1-model_v4 Polysaccharide deacetylase family protein 0.9743 124 295 GO:0005975
AF-A0A7V5XDF1-F1-model_v4 NodB homology domain-containing protein 0.9706 94 295 GO:0005975
GO:0016810

Map