F390372

General Info

Members Datasets Scaffolds Average Seq Length
291 191 582 735

Family's Representative Sequence

Representative Sequence 3300025901|Ga0207688_10025910|Ga0207688_100259101
Length 892
Sequence MFGFKSKSEDQPEKSGQAAQPSLFKRLREKLNRGNSWLTYDLANLLPAGRIDDTVLDELETRLITADVGVETTNRILDELRRKVQRKELADLNALLGALRSSLLDILTPTQQPLVIDRAAAPFAILVVGVNGAGKTTTIGKLARLLKQQGLKVMLAAGDTFRAAAVEQLQIWGERNDVTVIAQAAGADPAAVVFDALQAARARRIDVLLAGGPTEMTRVHGAGGWEASIDVAEIPDYRLRITYPGEFSAEVDDPFRYGRVITEYDVYLFAQGKHTRIYDKLGAHPMRIGEAVGVHFAVWAPNAERVSVVGDFNGWDGRMHPMRRLDPIGVWEIFIPGAQVGHHYKFEIRSQLWGELLLKTDPFGFRFEMPPLSAAIVARRDYEWHDAQWFVDRAGNNAWFNRAVSIYEVHLGSWARIPEERERSLTYLELADRLIPYVKEMGYTHIELMPVMEHPFFGSWGYQVTGFFAPSARYGAPEDFKAFVDKCHQANIGVILDWVPGHFPKDAHGLARFDGTSLYEHADPRQGEHRDWGTLIFNYGRNEVRNFLLANALFWLEEYHIDGLRVDAVASMLYLDYSRSADQWVPNKFGGRENLEAIEFMRELNALTHGEHAGSITVAEESTAFPSVSKPTYLGGLGFTYKWNMGWMNDTLEYVKQDPIFRRYHQRLLTFSLLYAFSENYILPFSHDEVVHMKGSMWGKVPGDDWQKAATLRALYGYMYAHPGKKLMFMGMEFGQTREWSHDRSLDWHLLEQPLHEGIRRFMRDLNRIYTSEAALYQCDFEPHGFQWIDCNDSDNSVVSLIRRATDPQDFLVAVLNFTPVVREGYVIGVPRGGSYTELLNSDASIYGGGNIGNGGVVFTDPVASHSHAQSLRLTLPPLGFLLLKPSAVTPS

Samples

Sample ID Description Type Environment
1 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
116 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
118 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
121 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
122 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
123 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
133 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
173 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
185 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
186 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
189 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
190 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
191 2848858292 Azospirillum brasilense Az39 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.63
Metatranscriptomes 0.34
Isolates 1.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.09
Nodule 0
Rhizoplane 3.44
Rhizosphere 92.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207688_10025910 3300025901 Bacteria 3223
2 JGI25406J46586_10000459 3300003203 Bacteria 19008
3 Ga0065715_10008926 3300005293 Bacteria 2551
4 Ga0065715_10098760 3300005293 Bacteria 3502
5 Ga0065715_10115957 3300005293 Bacteria 2397
6 Ga0070658_10020831 3300005327 Bacteria 5254
7 Ga0070690_100052812 3300005330 Bacteria 2599
8 Ga0070670_100003061 3300005331 Bacteria 13836
9 Ga0068869_100051791 3300005334 Bacteria 2979
10 Ga0070666_10064173 3300005335 Bacteria 2490
11 Ga0070680_100080200 3300005336 Bacteria 2691
12 Ga0068868_100050545 3300005338 Bacteria 3266
13 Ga0070687_100012816 3300005343 Bacteria 3715
14 Ga0070675_100091589 3300005354 Bacteria 2547
15 Ga0070671_100000959 3300005355 Bacteria 21132
16 Ga0070674_100016208 3300005356 Bacteria 4670
17 Ga0070674_100019394 3300005356 Bacteria 4320
18 Ga0070674_100069586 3300005356 Bacteria 2483
19 Ga0070673_100010028 3300005364 Bacteria 6392
20 Ga0070673_100029295 3300005364 Bacteria 4104
21 Ga0070673_100062284 3300005364 Bacteria 2963
22 Ga0070659_100080423 3300005366 Bacteria 2602
23 Ga0070714_100023509 3300005435 Bacteria 5065
24 Ga0070713_100001966 3300005436 Bacteria 13264
25 Ga0070701_10005053 3300005438 Bacteria 5415
26 Ga0070705_100006742 3300005440 Bacteria 5647
27 Ga0070700_100016406 3300005441 Bacteria 4219
28 Ga0070694_100001579 3300005444 Bacteria 13386
29 Ga0070694_100005258 3300005444 Bacteria 7824
30 Ga0070678_100020802 3300005456 Bacteria 4311
31 Ga0070662_100000385 3300005457 Bacteria 26267
32 Ga0070681_10107411 3300005458 Bacteria 2732
33 Ga0068867_100019532 3300005459 Bacteria 4829
34 Ga0070699_100001194 3300005518 Bacteria 23978
35 Ga0070699_100003632 3300005518 Bacteria 13646
36 Ga0070679_100067787 3300005530 Bacteria 3559
37 Ga0070684_100000689 3300005535 Bacteria 23237
38 Ga0070686_100000024 3300005544 Bacteria 128637
39 Ga0070686_100000424 3300005544 Bacteria 26581
40 Ga0070695_100003544 3300005545 Bacteria 9115
41 Ga0070695_100025874 3300005545 Bacteria 3627
42 Ga0070696_100019963 3300005546 Bacteria 4542
43 Ga0070693_100028844 3300005547 Bacteria 3021
44 Ga0070665_100002487 3300005548 Bacteria 20285
45 Ga0070665_100028329 3300005548 Bacteria 5642
46 Ga0070704_100004342 3300005549 Bacteria 8193
47 Ga0070704_100010575 3300005549 Bacteria 5618
48 Ga0070704_100018664 3300005549 Bacteria 4441
49 Ga0068855_100064402 3300005563 Bacteria 4275
50 Ga0070664_100001823 3300005564 Bacteria 17069
51 Ga0070664_100066207 3300005564 Bacteria 3085
52 Ga0068854_100033836 3300005578 Bacteria 3565
53 Ga0068854_100041027 3300005578 Bacteria 3268
54 Ga0068856_100051334 3300005614 Bacteria 4066
55 Ga0068859_100029461 3300005617 Bacteria 5507
56 Ga0068859_100056899 3300005617 Bacteria 3938
57 Ga0068859_100059619 3300005617 Bacteria 3845
58 Ga0068864_100031577 3300005618 Bacteria 4495
59 Ga0068861_100051565 3300005719 Bacteria 3123
60 Ga0068858_100002111 3300005842 Bacteria 20193
61 Ga0068858_100080676 3300005842 Bacteria 3023
62 Ga0068862_100033572 3300005844 Bacteria 4339
63 Ga0081455_10012545 3300005937 Bacteria 8455
64 Ga0081539_10000313 3300005985 Bacteria 108469
65 Ga0081539_10000561 3300005985 Bacteria 76621
66 Ga0081539_10001878 3300005985 Bacteria 32925
67 Ga0070716_100013251 3300006173 Bacteria 4198
68 Ga0075367_10005997 3300006178 Bacteria 6103
69 Ga0075367_10008267 3300006178 Bacteria 5384
70 Ga0075367_10011739 3300006178 Bacteria 4648
71 Ga0068871_100062199 3300006358 Bacteria 3050
72 Ga0075428_100011641 3300006844 Bacteria 9787
73 Ga0075428_100067217 3300006844 Bacteria 3924
74 Ga0075430_100001079 3300006846 Bacteria 21627
75 Ga0075430_100003232 3300006846 Bacteria 13654
76 Ga0075431_100041242 3300006847 Bacteria 4758
77 Ga0075431_100048117 3300006847 Bacteria 4398
78 Ga0075433_10066829 3300006852 Bacteria 3155
79 Ga0075433_10081959 3300006852 Bacteria 2845
80 Ga0075434_100000984 3300006871 Bacteria 23029
81 Ga0075434_100015477 3300006871 Bacteria 7315
82 Ga0075434_100028510 3300006871 Bacteria 5486
83 Ga0075434_100060756 3300006871 Bacteria 3759
84 Ga0075429_100008601 3300006880 Bacteria 8879
85 Ga0075429_100014424 3300006880 Bacteria 6848
86 Ga0075429_100020745 3300006880 Bacteria 5703
87 Ga0068865_100056070 3300006881 Bacteria 2744
88 Ga0075436_100000507 3300006914 Bacteria 25170
89 Ga0075436_100024931 3300006914 Bacteria 4112
90 Ga0097620_100029462 3300006931 Bacteria 5507
91 Ga0097620_100056898 3300006931 Bacteria 3938
92 Ga0097620_100059619 3300006931 Bacteria 3845
93 Ga0075435_100000005 3300007076 Bacteria 121698
94 Ga0075435_100003766 3300007076 Bacteria 10336
95 Ga0075435_100007011 3300007076 Bacteria 7996
96 Ga0111539_10000973 3300009094 Bacteria 37589
97 Ga0111539_10001134 3300009094 Bacteria 35229
98 Ga0111539_10001820 3300009094 Bacteria 28388
99 Ga0111539_10002378 3300009094 Bacteria 24984
100 Ga0111539_10006199 3300009094 Bacteria 15432
101 Ga0111539_10051691 3300009094 Bacteria 4893
102 Ga0111539_10069373 3300009094 Bacteria 4162
103 Ga0105247_10052107 3300009101 Bacteria 2522
104 Ga0114129_10000493 3300009147 Bacteria 47834
105 Ga0114129_10002661 3300009147 Bacteria 24853
106 Ga0114129_10004070 3300009147 Bacteria 20644
107 Ga0114129_10007474 3300009147 Bacteria 15564
108 Ga0114129_10013205 3300009147 Bacteria 11764
109 Ga0114129_10014820 3300009147 Bacteria 11109
110 Ga0114129_10031045 3300009147 Bacteria 7557
111 Ga0105243_10030374 3300009148 Bacteria 4159
112 Ga0105243_10045682 3300009148 Bacteria 3443
113 Ga0105242_10009189 3300009176 Bacteria 7586
114 Ga0105248_10001070 3300009177 Bacteria 30293
115 Ga0105248_10016576 3300009177 Bacteria 8113
116 Ga0105248_10028898 3300009177 Bacteria 6181
117 Ga0105238_10000078 3300009551 Bacteria 109783
118 Ga0105249_10006672 3300009553 Bacteria 10051
119 Ga0157369_10112990 3300013105 Bacteria 2885
120 Ga0157374_10032477 3300013296 Bacteria 4753
121 Ga0157375_10034636 3300013308 Bacteria 4812
122 Ga0163163_10022564 3300014325 Bacteria 5963
123 Ga0157380_10106213 3300014326 Bacteria 2349
124 Ga0157379_10006254 3300014968 Bacteria 10252
125 Ga0157379_10026508 3300014968 Bacteria 5160
126 Ga0207697_10011219 3300025315 Bacteria 3796
127 Ga0207697_10025730 3300025315 Bacteria 2406
128 Ga0207680_10024231 3300025903 Bacteria 3327
129 Ga0207645_10007418 3300025907 Bacteria 7750
130 Ga0207645_10020383 3300025907 Bacteria 4340
131 Ga0207707_10087036 3300025912 Bacteria 2730
132 Ga0207695_10071924 3300025913 Bacteria 3531
133 Ga0207662_10001717 3300025918 Bacteria 10727
134 Ga0207657_10007946 3300025919 Bacteria 10816
135 Ga0207646_10046014 3300025922 Bacteria 3916
136 Ga0207681_10008449 3300025923 Bacteria 6293
137 Ga0207681_10031452 3300025923 Bacteria 3466
138 Ga0207694_10000027 3300025924 Bacteria 248544
139 Ga0207650_10007845 3300025925 Bacteria 7272
140 Ga0207650_10031209 3300025925 Bacteria 3846
141 Ga0207650_10039728 3300025925 Bacteria 3439
142 Ga0207706_10000539 3300025933 Bacteria 40239
143 Ga0207669_10005266 3300025937 Bacteria 5782
144 Ga0207704_10043733 3300025938 Bacteria 2648
145 Ga0207691_10075258 3300025940 Bacteria 3044
146 Ga0207691_10113588 3300025940 Bacteria 2407
147 Ga0207711_10021576 3300025941 Bacteria 5379
148 Ga0207689_10003739 3300025942 Bacteria 13870
149 Ga0207661_10003343 3300025944 Bacteria 11127
150 Ga0207679_10011976 3300025945 Bacteria 5638
151 Ga0207679_10053876 3300025945 Bacteria 2959
152 Ga0207712_10012893 3300025961 Bacteria 5350
153 Ga0207658_10031521 3300025986 Bacteria 3766
154 Ga0207708_10007184 3300026075 Bacteria 8234
155 Ga0207702_10061043 3300026078 Bacteria 3214
156 Ga0207641_10000605 3300026088 Bacteria 39451
157 Ga0207648_10043176 3300026089 Bacteria 3958
158 Ga0207676_10001529 3300026095 Bacteria 17073
159 Ga0207676_10018663 3300026095 Bacteria 5048
160 Ga0207675_100005318 3300026118 Bacteria 12369
161 Ga0207675_100010727 3300026118 Bacteria 8583
162 Ga0207675_100025303 3300026118 Bacteria 5524
163 Ga0207683_10017219 3300026121 Bacteria 6155
164 Ga0207428_10005826 3300027907 Bacteria 11425
165 Ga0207428_10032955 3300027907 Bacteria 4259
166 Ga0268265_10015035 3300028380 Bacteria 5286
167 Ga0316579_10000666 3300031691 Bacteria 11618
168 Ga0316576_10000289 3300031727 Bacteria 22166
169 Ga0316578_10023926 3300031728 Bacteria 3422
170 Ga0307405_10008793 3300031731 Bacteria 5141
171 Ga0307413_10018778 3300031824 Bacteria 3636
172 Ga0307410_10029884 3300031852 Bacteria 3475
173 Ga0307407_10005215 3300031903 Bacteria 5607
174 Ga0307407_10005392 3300031903 Bacteria 5545
175 Ga0307412_10005626 3300031911 Bacteria 7036
176 Ga0307416_100007525 3300032002 Bacteria 6938
177 Ga0307414_10015458 3300032004 Bacteria 4607
178 Ga0307415_100030968 3300032126 Bacteria 3441
179 Ga0316583_10007903 3300032133 Bacteria 3834
180 Ga0316592_1000235 3300033524 Bacteria 6808
181 Ga0373959_0000107 3300034820 Bacteria 18508
182 Ga0373949_0000886 3300035090 Bacteria 9405
183 Ga0373939_0000259 3300035114 Bacteria 14201
184 Ga0373941_0011361 3300035115 Bacteria 2299
185 Ga0373960_0008861 3300035121 Bacteria 2423
186 Ga0373961_0002031 3300035241 Bacteria 5418
187 Ga0373962_0001681 3300035242 Bacteria 5256
188 Ga0373935_0011856 3300035692 Bacteria 5237
189 Ga0373947_0007925 3300035725 Bacteria 6126
190 Ga0373937_0001826 3300036401 Bacteria 17866
191 Ga0316584_0037428 3300036712 Bacteria 3604
192 Ga0373925_0000535 3300037068 Bacteria 37601
193 Ga0373925_0040622 3300037068 Bacteria 3445
194 Ga0395899_0011543 3300037312 Bacteria 6764
195 Ga0395900_0051237 3300037418 Bacteria 4253
196 Ga0395901_0108271 3300038443 Bacteria 2917
197 Ga0439464_0001225 3300042439 Bacteria 5972
198 Ga0466961_0011554 3300044693 Bacteria 5646
199 Ga0495662_0009020 3300046476 Bacteria 4898
200 Ga0495643_0000033 3300046522 Bacteria 251940
201 Ga0495586_0003477 3300046535 Bacteria 8445
202 Ga0495645_0004747 3300046543 Bacteria 9290
203 Ga0495667_0003263 3300046559 Bacteria 10875
204 Ga0495659_0007479 3300046664 Bacteria 3468
205 Ga0495599_0008068 3300046678 Bacteria 6393
206 Ga0495613_0001660 3300046689 Bacteria 16927
207 Ga0495674_0045928 3300047319 Bacteria 3878
208 Ga0495680_0021169 3300047322 Bacteria 5450
209 Ga0495684_0000162 3300047471 Bacteria 50004
210 Ga0495684_0062837 3300047471 Bacteria 2824
211 Ga0496101_0000290 3300048904 Bacteria 34975
212 Ga0496104_0074059 3300048907 Bacteria 3241
213 Ga0496108_0060538 3300048911 Bacteria 3186
214 Ga0496109_0120314 3300048912 Bacteria 2446
215 Ga0496110_0080653 3300048913 Bacteria 2900
216 Ga0496112_0001607 3300048915 Bacteria 17471
217 Ga0496112_0056821 3300048915 Bacteria 3852
218 Ga0496112_0070052 3300048915 Bacteria 3465
219 Ga0496113_0013142 3300048916 Bacteria 5592
220 Ga0496114_0018645 3300048917 Bacteria 5613
221 Ga0501034_0009522 3300049571 Bacteria 10169
222 Ga0501036_0088353 3300049572 Bacteria 2619
223 Ga0501040_0027078 3300049576 Bacteria 3858
224 Ga0501041_0021417 3300049577 Bacteria 3874
225 Ga0501042_0005394 3300049578 Bacteria 8229
226 Ga0501042_0009982 3300049578 Bacteria 6347
227 Ga0501046_0029906 3300049580 Bacteria 4426
228 Ga0501047_0043969 3300049581 Bacteria 4314
229 Ga0501048_0022593 3300049582 Bacteria 4600
230 Ga0501071_0012105 3300049587 Bacteria 5835
231 Ga0501072_0009688 3300049588 Bacteria 7327
232 Ga0501075_0017320 3300049591 Bacteria 5204
233 Ga0501075_0024921 3300049591 Bacteria 4392
234 Ga0501076_0004191 3300049592 Bacteria 10210
235 Ga0501076_0016108 3300049592 Bacteria 5660
236 Ga0501077_0042281 3300049593 Bacteria 2898
237 Ga0501079_0074403 3300049741 Bacteria 2626
238 Ga0501081_0017998 3300049743 Bacteria 4688
239 Ga0501044_0019373 3300049823 Bacteria 7282
240 Ga0501045_0001392 3300049824 Bacteria 16129
241 Ga0501045_0022058 3300049824 Bacteria 4556
242 nmdc:mga00v17_9789_c1 3300050491 Bacteria 5207
243 nmdc:mga0k408_702_c1 3300050493 Bacteria 18324
244 nmdc:mga06z11_15841_c1 3300050494 Bacteria 3377
245 nmdc:mga06z11_1728_c1 3300050494 Bacteria 8212
246 nmdc:mga07m45_19036_c1 3300050496 Bacteria 3715
247 nmdc:mga05p37_12133_c1 3300050507 Bacteria 10291
248 nmdc:mga05p37_12705_c1 3300050507 Bacteria 10065
249 nmdc:mga05p37_1288_c1 3300050507 Bacteria 29118
250 nmdc:mga05p37_50189_c1 3300050507 Bacteria 5131
251 nmdc:mga05p37_55755_c1 3300050507 Bacteria 4865
252 nmdc:mga05p37_7071_c1 3300050507 Bacteria 13230
253 nmdc:mga05p37_77224_c1 3300050507 Bacteria 4100
254 nmdc:mga05p37_826_c1 3300050507 Bacteria 34745
255 nmdc:mga09592_17328_c1 3300050508 Bacteria 5901
256 nmdc:mga09592_26322_c1 3300050508 Bacteria 4818
257 nmdc:mga0qj67_19602_c1 3300050509 Bacteria 5169
258 nmdc:mga0qj67_37947_c1 3300050509 Bacteria 3777
259 nmdc:mga06r32_17263_c1 3300050510 Bacteria 6589
260 nmdc:mga08y16_347_c1 3300050511 Bacteria 41642
261 nmdc:mga08y16_5106_c1 3300050511 Bacteria 13713
262 nmdc:mga08y16_9075_c1 3300050511 Bacteria 10439
263 nmdc:mga08y16_98949_c1 3300050511 Bacteria 3037
264 nmdc:mga0n895_30267_c1 3300050512 Bacteria 5172
265 nmdc:mga0n895_32379_c1 3300050512 Bacteria 5019
266 nmdc:mga0n895_4833_c1 3300050512 Bacteria 11160
267 nmdc:mga0n895_525_c1 3300050512 Bacteria 26154
268 nmdc:mga0rr50_14057_c1 3300050513 Bacteria 5236
269 nmdc:mga0rr50_17236_c1 3300050513 Bacteria 4817
270 nmdc:mga0rr50_18_c1 3300050513 Bacteria 166751
271 nmdc:mga08x19_164_c1 3300050514 Bacteria 48608
272 nmdc:mga08x19_17789_c1 3300050514 Bacteria 4352
273 nmdc:mga0a205_121612_c1 3300050515 Bacteria 2510
274 nmdc:mga0a205_14581_c1 3300050515 Bacteria 7335
275 nmdc:mga0a205_3517_c1 3300050515 Bacteria 14001
276 nmdc:mga0a205_4683_c1 3300050515 Bacteria 12274
277 nmdc:mga0a205_54598_c1 3300050515 Bacteria 3858
278 nmdc:mga0a205_70043_c1 3300050515 Bacteria 3386
279 nmdc:mga0a205_92470_c1 3300050515 Bacteria 2923
280 nmdc:mga0a205_9339_c1 3300050515 Bacteria 8958
281 Ga0495601_0006050 3300053077 Bacteria 7061
282 Ga0495619_0005928 3300053085 Bacteria 7741
283 Ga0500628_003469 3300053129 Bacteria 2602
284 Ga0590071_005513 3300059421 Bacteria 3040
285 Ga0590075_000332 3300059424 Bacteria 13166
286 Ga0590075_000550 3300059424 Bacteria 10126
287 Ga0590077_000204 3300059426 Bacteria 17184
288 Ga0590077_000237 3300059426 Bacteria 15719
289 2599104883 2597490356 Bacteria 7030811
290 2846954396 2846952575 Bacteria 6587527
291 2848859344 2848858292 Bacteria 7391279
292 Ga0207688_10025910
293 JGI25406J46586_10000459
294 Ga0065715_10008926
295 Ga0065715_10098760
296 Ga0065715_10115957
297 Ga0070658_10020831
298 Ga0070690_100052812
299 Ga0070670_100003061
300 Ga0068869_100051791
301 Ga0070666_10064173
302 Ga0070680_100080200
303 Ga0068868_100050545
304 Ga0070687_100012816
305 Ga0070675_100091589
306 Ga0070671_100000959
307 Ga0070674_100016208
308 Ga0070674_100019394
309 Ga0070674_100069586
310 Ga0070673_100010028
311 Ga0070673_100029295
312 Ga0070673_100062284
313 Ga0070659_100080423
314 Ga0070714_100023509
315 Ga0070713_100001966
316 Ga0070701_10005053
317 Ga0070705_100006742
318 Ga0070700_100016406
319 Ga0070694_100001579
320 Ga0070694_100005258
321 Ga0070678_100020802
322 Ga0070662_100000385
323 Ga0070681_10107411
324 Ga0068867_100019532
325 Ga0070699_100001194
326 Ga0070699_100003632
327 Ga0070679_100067787
328 Ga0070684_100000689
329 Ga0070686_100000024
330 Ga0070686_100000424
331 Ga0070695_100003544
332 Ga0070695_100025874
333 Ga0070696_100019963
334 Ga0070693_100028844
335 Ga0070665_100002487
336 Ga0070665_100028329
337 Ga0070704_100004342
338 Ga0070704_100010575
339 Ga0070704_100018664
340 Ga0068855_100064402
341 Ga0070664_100001823
342 Ga0070664_100066207
343 Ga0068854_100033836
344 Ga0068854_100041027
345 Ga0068856_100051334
346 Ga0068859_100029461
347 Ga0068859_100056899
348 Ga0068859_100059619
349 Ga0068864_100031577
350 Ga0068861_100051565
351 Ga0068858_100002111
352 Ga0068858_100080676
353 Ga0068862_100033572
354 Ga0081455_10012545
355 Ga0081539_10000313
356 Ga0081539_10000561
357 Ga0081539_10001878
358 Ga0070716_100013251
359 Ga0075367_10005997
360 Ga0075367_10008267
361 Ga0075367_10011739
362 Ga0068871_100062199
363 Ga0075428_100011641
364 Ga0075428_100067217
365 Ga0075430_100001079
366 Ga0075430_100003232
367 Ga0075431_100041242
368 Ga0075431_100048117
369 Ga0075433_10066829
370 Ga0075433_10081959
371 Ga0075434_100000984
372 Ga0075434_100015477
373 Ga0075434_100028510
374 Ga0075434_100060756
375 Ga0075429_100008601
376 Ga0075429_100014424
377 Ga0075429_100020745
378 Ga0068865_100056070
379 Ga0075436_100000507
380 Ga0075436_100024931
381 Ga0097620_100029462
382 Ga0097620_100056898
383 Ga0097620_100059619
384 Ga0075435_100000005
385 Ga0075435_100003766
386 Ga0075435_100007011
387 Ga0111539_10000973
388 Ga0111539_10001134
389 Ga0111539_10001820
390 Ga0111539_10002378
391 Ga0111539_10006199
392 Ga0111539_10051691
393 Ga0111539_10069373
394 Ga0105247_10052107
395 Ga0114129_10000493
396 Ga0114129_10002661
397 Ga0114129_10004070
398 Ga0114129_10007474
399 Ga0114129_10013205
400 Ga0114129_10014820
401 Ga0114129_10031045
402 Ga0105243_10030374
403 Ga0105243_10045682
404 Ga0105242_10009189
405 Ga0105248_10001070
406 Ga0105248_10016576
407 Ga0105248_10028898
408 Ga0105238_10000078
409 Ga0105249_10006672
410 Ga0157369_10112990
411 Ga0157374_10032477
412 Ga0157375_10034636
413 Ga0163163_10022564
414 Ga0157380_10106213
415 Ga0157379_10006254
416 Ga0157379_10026508
417 Ga0207697_10011219
418 Ga0207697_10025730
419 Ga0207680_10024231
420 Ga0207645_10007418
421 Ga0207645_10020383
422 Ga0207707_10087036
423 Ga0207695_10071924
424 Ga0207662_10001717
425 Ga0207657_10007946
426 Ga0207646_10046014
427 Ga0207681_10008449
428 Ga0207681_10031452
429 Ga0207694_10000027
430 Ga0207650_10007845
431 Ga0207650_10031209
432 Ga0207650_10039728
433 Ga0207706_10000539
434 Ga0207669_10005266
435 Ga0207704_10043733
436 Ga0207691_10075258
437 Ga0207691_10113588
438 Ga0207711_10021576
439 Ga0207689_10003739
440 Ga0207661_10003343
441 Ga0207679_10011976
442 Ga0207679_10053876
443 Ga0207712_10012893
444 Ga0207658_10031521
445 Ga0207708_10007184
446 Ga0207702_10061043
447 Ga0207641_10000605
448 Ga0207648_10043176
449 Ga0207676_10001529
450 Ga0207676_10018663
451 Ga0207675_100005318
452 Ga0207675_100010727
453 Ga0207675_100025303
454 Ga0207683_10017219
455 Ga0207428_10005826
456 Ga0207428_10032955
457 Ga0268265_10015035
458 Ga0316579_10000666
459 Ga0316576_10000289
460 Ga0316578_10023926
461 Ga0307405_10008793
462 Ga0307413_10018778
463 Ga0307410_10029884
464 Ga0307407_10005215
465 Ga0307407_10005392
466 Ga0307412_10005626
467 Ga0307416_100007525
468 Ga0307414_10015458
469 Ga0307415_100030968
470 Ga0316583_10007903
471 Ga0316592_1000235
472 Ga0373959_0000107
473 Ga0373949_0000886
474 Ga0373939_0000259
475 Ga0373941_0011361
476 Ga0373960_0008861
477 Ga0373961_0002031
478 Ga0373962_0001681
479 Ga0373935_0011856
480 Ga0373947_0007925
481 Ga0373937_0001826
482 Ga0316584_0037428
483 Ga0373925_0000535
484 Ga0373925_0040622
485 Ga0395899_0011543
486 Ga0395900_0051237
487 Ga0395901_0108271
488 Ga0439464_0001225
489 Ga0466961_0011554
490 Ga0495662_0009020
491 Ga0495643_0000033
492 Ga0495586_0003477
493 Ga0495645_0004747
494 Ga0495667_0003263
495 Ga0495659_0007479
496 Ga0495599_0008068
497 Ga0495613_0001660
498 Ga0495674_0045928
499 Ga0495680_0021169
500 Ga0495684_0000162
501 Ga0495684_0062837
502 Ga0496101_0000290
503 Ga0496104_0074059
504 Ga0496108_0060538
505 Ga0496109_0120314
506 Ga0496110_0080653
507 Ga0496112_0001607
508 Ga0496112_0056821
509 Ga0496112_0070052
510 Ga0496113_0013142
511 Ga0496114_0018645
512 Ga0501034_0009522
513 Ga0501036_0088353
514 Ga0501040_0027078
515 Ga0501041_0021417
516 Ga0501042_0005394
517 Ga0501042_0009982
518 Ga0501046_0029906
519 Ga0501047_0043969
520 Ga0501048_0022593
521 Ga0501071_0012105
522 Ga0501072_0009688
523 Ga0501075_0017320
524 Ga0501075_0024921
525 Ga0501076_0004191
526 Ga0501076_0016108
527 Ga0501077_0042281
528 Ga0501079_0074403
529 Ga0501081_0017998
530 Ga0501044_0019373
531 Ga0501045_0001392
532 Ga0501045_0022058
533 nmdc:mga00v17_9789_c1
534 nmdc:mga0k408_702_c1
535 nmdc:mga06z11_15841_c1
536 nmdc:mga06z11_1728_c1
537 nmdc:mga07m45_19036_c1
538 nmdc:mga05p37_12133_c1
539 nmdc:mga05p37_12705_c1
540 nmdc:mga05p37_1288_c1
541 nmdc:mga05p37_50189_c1
542 nmdc:mga05p37_55755_c1
543 nmdc:mga05p37_7071_c1
544 nmdc:mga05p37_77224_c1
545 nmdc:mga05p37_826_c1
546 nmdc:mga09592_17328_c1
547 nmdc:mga09592_26322_c1
548 nmdc:mga0qj67_19602_c1
549 nmdc:mga0qj67_37947_c1
550 nmdc:mga06r32_17263_c1
551 nmdc:mga08y16_347_c1
552 nmdc:mga08y16_5106_c1
553 nmdc:mga08y16_9075_c1
554 nmdc:mga08y16_98949_c1
555 nmdc:mga0n895_30267_c1
556 nmdc:mga0n895_32379_c1
557 nmdc:mga0n895_4833_c1
558 nmdc:mga0n895_525_c1
559 nmdc:mga0rr50_14057_c1
560 nmdc:mga0rr50_17236_c1
561 nmdc:mga0rr50_18_c1
562 nmdc:mga08x19_164_c1
563 nmdc:mga08x19_17789_c1
564 nmdc:mga0a205_121612_c1
565 nmdc:mga0a205_14581_c1
566 nmdc:mga0a205_3517_c1
567 nmdc:mga0a205_4683_c1
568 nmdc:mga0a205_54598_c1
569 nmdc:mga0a205_70043_c1
570 nmdc:mga0a205_92470_c1
571 nmdc:mga0a205_9339_c1
572 Ga0495601_0006050
573 Ga0495619_0005928
574 Ga0500628_003469
575 Ga0590071_005513
576 Ga0590075_000332
577 Ga0590075_000550
578 Ga0590077_000204
579 Ga0590077_000237
580 2599104883
581 2846954396
582 2848859344

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00448

SRP54

SRP54-type protein, GTPase domain

122

212

0.97

PF02806

Alpha-amylase_C

Alpha amylase, C-terminal all-beta domain

788

887

0.96

PF02922

CBM_48

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

280

364

0.92

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

430

534

0.89

PF02881

SRP54_N

SRP54-type protein, helical bundle domain

38

103

0.86

PF06414

Zeta_toxin

Zeta toxin

108

212

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5e6z-assembly3.cif.gz_C crystal structure of ecoli branching enzyme with beta cyclodextrin 0.9647 126 738
1m7x-assembly3.cif.gz_C the x-ray crystallographic structure of branching enzyme 0.9621 126 738
5e6y-assembly4.cif.gz_D crystal structure of e.coli branching enzyme in complex with alpha cyclodextrin 0.961 125 738
5e6z-assembly2.cif.gz_B crystal structure of ecoli branching enzyme with beta cyclodextrin 0.9597 125 738
5e6y-assembly3.cif.gz_C crystal structure of e.coli branching enzyme in complex with alpha cyclodextrin 0.9597 125 738
ID Description Score Start End Superfamily
af_P07762_103_221_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9839 111 229 2.60.40.10
5gquA04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9837 632 737 2.60.40.1180
af_P07762_103_221_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9758 111 229 2.60.40.10
af_P9WN45_110_230_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9755 113 229 2.60.40.10
3k1dA03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9753 636 737 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A523ASD6-F1-model_v4 1,4-alpha-glucan branching enzyme 1.005 666 737 GO:0003824
GO:0005975
GO:0043169
AF-A0A645BZH8-F1-model_v4 1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) 1.001 664 737 GO:0003844
GO:0005975
GO:0043169
AF-A0A2M8N5R9-F1-model_v4 1,4-alpha-glucan branching enzyme 0.9983 641 738 GO:0003824
GO:0005975
GO:0043169
AF-A0A7V4Y2Y7-F1-model_v4 1,4-alpha-glucan branching enzyme 0.992 630 737 GO:0003844
GO:0005829
GO:0005978
GO:0043169
AF-A0A2V6FG26-F1-model_v4 1,4-alpha-glucan branching enzyme 0.9915 616 736 GO:0003844
GO:0005829
GO:0005978
GO:0043169

Map