F390305

General Info

Members Datasets Scaffolds Average Seq Length
291 188 582 161

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10000002|Ga0111539_1000000291
Length 177
Sequence VSQELFLIRLDWQRRKNIMNARIDLMHVNPGVIKAMLGLERQIRQAGLDHRLLDLVRMRASQINGCAYCLDMHSKDARANGETEQRLYGLNAWRETPYYSERERAALEWTDALTLVSESGAPDDLYERVRVQFSEDEFVHLTLAIVAINGWNRLNVAARTVPGDYVAGSIAQVHAMI

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
107 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
126 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
127 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
128 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
129 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
130 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
131 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
132 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
135 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
138 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
142 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
165 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
174 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
185 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.97
Metatranscriptomes 1.03
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.12
Nodule 0
Rhizoplane 0.34
Rhizosphere 95.53
Stem 0
Stem Tuber 0
Unclassified 0.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10000002 3300009094 Bacteria 983359
2 Ga0065715_10066293 3300005293 Bacteria 707
3 Ga0065715_10101623 3300005293 Bacteria 3186
4 Ga0065715_10149633 3300005293 Bacteria 1745
5 Ga0065715_10205647 3300005293 Bacteria 1339
6 Ga0065707_10033305 3300005295 Bacteria 1120
7 Ga0065707_10107515 3300005295 Bacteria 2550
8 Ga0065707_10421036 3300005295 Bacteria 830
9 Ga0070676_10207894 3300005328 Bacteria 1286
10 Ga0070676_10869215 3300005328 Bacteria 670
11 Ga0070676_11056356 3300005328 Bacteria 612
12 Ga0070690_100714474 3300005330 Bacteria 771
13 Ga0070670_100453505 3300005331 Bacteria 1137
14 Ga0068869_100542205 3300005334 Bacteria 976
15 Ga0070666_10088971 3300005335 Bacteria 2119
16 Ga0068868_100302549 3300005338 Bacteria 1359
17 Ga0070660_100321145 3300005339 Bacteria 1272
18 Ga0070689_100349007 3300005340 Bacteria 1241
19 Ga0070691_10611048 3300005341 Bacteria 645
20 Ga0070687_100118636 3300005343 Bacteria 1509
21 Ga0070687_100176916 3300005343 Bacteria 1275
22 Ga0070687_100385907 3300005343 Bacteria 914
23 Ga0070669_100613737 3300005353 Bacteria 912
24 Ga0070669_101414495 3300005353 Bacteria 604
25 Ga0070675_100006481 3300005354 Bacteria 8989
26 Ga0070675_100179059 3300005354 Bacteria 1832
27 Ga0070675_100482180 3300005354 Bacteria 1115
28 Ga0070671_100060167 3300005355 Bacteria 3162
29 Ga0070671_100742874 3300005355 Bacteria 852
30 Ga0070674_100044222 3300005356 Bacteria 3035
31 Ga0070673_100035133 3300005364 Bacteria 3798
32 Ga0070709_10417196 3300005434 Bacteria 1005
33 Ga0070714_100421746 3300005435 Bacteria 1264
34 Ga0070701_10010228 3300005438 Bacteria 4139
35 Ga0070701_10324010 3300005438 Bacteria 954
36 Ga0070705_100239965 3300005440 Bacteria 1266
37 Ga0070705_100722481 3300005440 Bacteria 785
38 Ga0070694_101139953 3300005444 Bacteria 652
39 Ga0070678_100674784 3300005456 Bacteria 929
40 Ga0070662_100180710 3300005457 Bacteria 1663
41 Ga0070662_100301370 3300005457 Bacteria 1302
42 Ga0068867_100074640 3300005459 Bacteria 2542
43 Ga0068867_100135494 3300005459 Bacteria 1919
44 Ga0070679_101777427 3300005530 Bacteria 565
45 Ga0070672_100028928 3300005543 Bacteria 4149
46 Ga0070686_100015451 3300005544 Bacteria 4423
47 Ga0070696_100135545 3300005546 Bacteria 1795
48 Ga0070696_100616138 3300005546 Bacteria 877
49 Ga0070696_100931624 3300005546 Unclassified 722
50 Ga0070696_101103279 3300005546 Bacteria 667
51 Ga0070693_100616439 3300005547 Bacteria 785
52 Ga0068855_100797661 3300005563 Bacteria 1004
53 Ga0068855_101079927 3300005563 Bacteria 840
54 Ga0070702_101472689 3300005615 Bacteria 559
55 Ga0068852_101686240 3300005616 Bacteria 656
56 Ga0068864_100603128 3300005618 Bacteria 1066
57 Ga0068866_10724264 3300005718 Bacteria 684
58 Ga0068861_100033646 3300005719 Bacteria 3783
59 Ga0068861_100526754 3300005719 Bacteria 1073
60 Ga0068858_100666145 3300005842 Bacteria 1011
61 Ga0068860_101069795 3300005843 Bacteria 826
62 Ga0068862_100319219 3300005844 Bacteria 1433
63 Ga0075368_10045624 3300006042 Bacteria 1731
64 Ga0075364_10372782 3300006051 Bacteria 973
65 Ga0070712_100206384 3300006175 Bacteria 1547
66 Ga0075367_10078933 3300006178 Bacteria 1988
67 Ga0075366_10274702 3300006195 Bacteria 1029
68 Ga0097621_100098075 3300006237 Bacteria 2461
69 Ga0097621_100113839 3300006237 Bacteria 2288
70 Ga0075370_10084095 3300006353 Bacteria 1831
71 Ga0068871_100010534 3300006358 Bacteria 6754
72 Ga0068871_100740767 3300006358 Bacteria 903
73 Ga0075428_100000015 3300006844 Bacteria 164556
74 Ga0075428_100000864 3300006844 Bacteria 31871
75 Ga0075428_100004122 3300006844 Bacteria 15997
76 Ga0075428_100197492 3300006844 Bacteria 2175
77 Ga0075428_100205518 3300006844 Bacteria 2128
78 Ga0075428_101479048 3300006844 Bacteria 712
79 Ga0075430_100012620 3300006846 Bacteria 7194
80 Ga0075430_100029377 3300006846 Bacteria 4665
81 Ga0075431_100015802 3300006847 Bacteria 7653
82 Ga0075431_100031530 3300006847 Bacteria 5459
83 Ga0075431_100048841 3300006847 Bacteria 4364
84 Ga0075431_100051300 3300006847 Bacteria 4255
85 Ga0075431_100085858 3300006847 Bacteria 3248
86 Ga0075431_100595763 3300006847 Bacteria 1090
87 Ga0075433_11190605 3300006852 Bacteria 661
88 Ga0075429_100007662 3300006880 Bacteria 9374
89 Ga0075429_100015296 3300006880 Bacteria 6649
90 Ga0075429_100224961 3300006880 Bacteria 1643
91 Ga0068865_100016796 3300006881 Bacteria 4691
92 Ga0075435_100404868 3300007076 Bacteria 1174
93 Ga0105240_10002932 3300009093 Bacteria 26921
94 Ga0111539_10001367 3300009094 Bacteria 32489
95 Ga0111539_10002378 3300009094 Bacteria 24984
96 Ga0111539_10135205 3300009094 Bacteria 2887
97 Ga0111539_10380563 3300009094 Bacteria 1643
98 Ga0111539_10423449 3300009094 Bacteria 1551
99 Ga0111539_10595601 3300009094 Bacteria 1287
100 Ga0111539_11391381 3300009094 Bacteria 814
101 Ga0114129_10056538 3300009147 Bacteria 5495
102 Ga0114129_11880295 3300009147 Bacteria 726
103 Ga0105243_11169675 3300009148 Bacteria 781
104 Ga0105241_10812233 3300009174 Bacteria 862
105 Ga0105242_10075495 3300009176 Bacteria 2807
106 Ga0105242_10638476 3300009176 Bacteria 1034
107 Ga0105248_10018246 3300009177 Bacteria 7748
108 Ga0105248_10145229 3300009177 Bacteria 2677
109 Ga0105248_10432466 3300009177 Bacteria 1482
110 Ga0105248_10612868 3300009177 Bacteria 1228
111 Ga0105248_12925792 3300009177 Bacteria 544
112 Ga0105238_11292007 3300009551 Bacteria 755
113 Ga0105246_10394414 3300011119 Bacteria 1148
114 Ga0105246_10965538 3300011119 Bacteria 769
115 Ga0157374_10402364 3300013296 Bacteria 1366
116 Ga0163162_10232631 3300013306 Bacteria 1973
117 Ga0163162_10819652 3300013306 Bacteria 1047
118 Ga0157375_10310066 3300013308 Bacteria 1742
119 Ga0157375_10499883 3300013308 Bacteria 1380
120 Ga0157375_12016909 3300013308 Bacteria 686
121 Ga0163163_10377261 3300014325 Bacteria 1476
122 Ga0163163_11043137 3300014325 Bacteria 881
123 Ga0157380_10436628 3300014326 Bacteria 1253
124 Ga0157380_10642021 3300014326 Bacteria 1057
125 Ga0157380_10985219 3300014326 Bacteria 875
126 Ga0157377_10024038 3300014745 Bacteria 3236
127 Ga0157376_10243718 3300014969 Bacteria 1675
128 Ga0163161_11582515 3300017792 Bacteria 577
129 Ga0206356_11802134 3300020070 Bacteria 820
130 Ga0206353_11926413 3300020082 Bacteria 941
131 Ga0224712_10158672 3300022467 Bacteria 1007
132 Ga0207697_10101756 3300025315 Bacteria 1225
133 Ga0207642_10120481 3300025899 Bacteria 1352
134 Ga0207680_10083297 3300025903 Bacteria 2015
135 Ga0207645_10190017 3300025907 Bacteria 1349
136 Ga0207654_11072065 3300025911 Bacteria 587
137 Ga0207707_10507986 3300025912 Bacteria 1027
138 Ga0207695_10014731 3300025913 Bacteria 9246
139 Ga0207662_10013464 3300025918 Bacteria 4574
140 Ga0207657_10053799 3300025919 Bacteria 3485
141 Ga0207659_10000086 3300025926 Bacteria 55279
142 Ga0207659_10007168 3300025926 Bacteria 6843
143 Ga0207659_10457243 3300025926 Bacteria 1076
144 Ga0207644_10733487 3300025931 Bacteria 825
145 Ga0207690_11020827 3300025932 Bacteria 688
146 Ga0207706_11382121 3300025933 Bacteria 579
147 Ga0207670_10132528 3300025936 Bacteria 1828
148 Ga0207670_10715085 3300025936 Bacteria 830
149 Ga0207669_10451080 3300025937 Bacteria 1019
150 Ga0207669_10536601 3300025937 Bacteria 942
151 Ga0207704_10008968 3300025938 Bacteria 4807
152 Ga0207691_10023578 3300025940 Bacteria 5794
153 Ga0207691_10030895 3300025940 Bacteria 5002
154 Ga0207711_10019964 3300025941 Bacteria 5584
155 Ga0207689_10172764 3300025942 Bacteria 1782
156 Ga0207689_10461675 3300025942 Bacteria 1062
157 Ga0207689_11342016 3300025942 Bacteria 600
158 Ga0207667_10673043 3300025949 Bacteria 1039
159 Ga0207651_10004480 3300025960 Bacteria 7047
160 Ga0207651_10092248 3300025960 Bacteria 2220
161 Ga0207651_10472732 3300025960 Bacteria 1079
162 Ga0207658_10429822 3300025986 Bacteria 1166
163 Ga0207677_10097986 3300026023 Bacteria 2150
164 Ga0207677_10281550 3300026023 Bacteria 1365
165 Ga0207703_10178720 3300026035 Bacteria 1872
166 Ga0207641_10526834 3300026088 Bacteria 1150
167 Ga0207648_10238541 3300026089 Bacteria 1618
168 Ga0207648_10261490 3300026089 Bacteria 1544
169 Ga0207675_100030943 3300026118 Bacteria 4984
170 Ga0207683_10965161 3300026121 Bacteria 791
171 Ga0209967_1045304 3300027364 Bacteria 672
172 Ga0210002_1042915 3300027617 Bacteria 770
173 Ga0209983_1057902 3300027665 Bacteria 853
174 Ga0209813_10125246 3300027866 Bacteria 898
175 Ga0209974_10054437 3300027876 Bacteria 1348
176 Ga0207428_10000004 3300027907 Bacteria 727800
177 Ga0207428_10005509 3300027907 Bacteria 11794
178 Ga0207428_10133469 3300027907 Bacteria 1899
179 Ga0207428_10308915 3300027907 Bacteria 1169
180 Ga0265339_10021958 3300031249 Bacteria 3704
181 Ga0307408_100004139 3300031548 Bacteria 9877
182 Ga0307408_100636314 3300031548 Bacteria 952
183 Ga0307408_102078772 3300031548 Bacteria 547
184 Ga0307405_10242523 3300031731 Bacteria 1336
185 Ga0307405_10502313 3300031731 Bacteria 972
186 Ga0307413_10446062 3300031824 Bacteria 1026
187 Ga0307410_11384976 3300031852 Bacteria 617
188 Ga0307409_100413892 3300031995 Bacteria 1291
189 Ga0307409_101503591 3300031995 Bacteria 701
190 Ga0307416_100050126 3300032002 Bacteria 3326
191 Ga0307416_100109354 3300032002 Bacteria 2431
192 Ga0307411_11702760 3300032005 Bacteria 584
193 Ga0307415_100111175 3300032126 Bacteria 2033
194 Ga0373936_0348247 3300035113 Bacteria 674
195 Ga0373961_0114571 3300035241 Bacteria 887
196 Ga0373931_0080043 3300035691 Bacteria 1801
197 Ga0373933_0111433 3300035724 Bacteria 1707
198 Ga0373947_0043024 3300035725 Bacteria 2697
199 Ga0373937_0036658 3300036401 Bacteria 4469
200 Ga0395900_1466721 3300037418 Bacteria 595
201 Ga0439453_0075554 3300041408 Bacteria 719
202 Ga0439461_0010759 3300041410 Bacteria 1686
203 Ga0439433_0099862 3300041999 Bacteria 719
204 Ga0439463_142431 3300042016 Bacteria 621
205 Ga0450896_085540 3300042133 Bacteria 534
206 Ga0439434_0045144 3300042435 Bacteria 1359
207 Ga0439435_0067156 3300042436 Bacteria 1055
208 Ga0439435_0162760 3300042436 Bacteria 721
209 Ga0439464_0002172 3300042439 Bacteria 4796
210 Ga0495605_0417924 3300046474 Bacteria 556
211 Ga0495584_0242269 3300046491 Bacteria 917
212 Ga0495584_0488940 3300046491 Bacteria 627
213 Ga0495594_0178769 3300046499 Bacteria 1208
214 Ga0495608_0255371 3300046511 Bacteria 1092
215 Ga0495644_0251991 3300046523 Bacteria 686
216 Ga0495586_0291720 3300046535 Bacteria 934
217 Ga0495633_0113249 3300046558 Bacteria 1258
218 Ga0495634_0107348 3300046642 Bacteria 1798
219 Ga0495634_0310844 3300046642 Bacteria 951
220 Ga0495659_0021453 3300046664 Bacteria 2177
221 Ga0495669_0137118 3300046684 Bacteria 1154
222 Ga0495604_0506299 3300047317 Bacteria 783
223 Ga0495680_0209808 3300047322 Bacteria 1395
224 Ga0495684_0222578 3300047471 Bacteria 1383
225 Ga0496104_0062533 3300048907 Bacteria 3530
226 Ga0501299_014361 3300049522 Bacteria 1377
227 Ga0501033_0009537 3300049570 Bacteria 7470
228 Ga0501033_0236989 3300049570 Bacteria 1295
229 Ga0501034_0810538 3300049571 Bacteria 828
230 Ga0501036_1072014 3300049572 Bacteria 659
231 Ga0501038_0721978 3300049574 Bacteria 745
232 Ga0501040_0069958 3300049576 Bacteria 2421
233 Ga0501041_0008772 3300049577 Bacteria 5950
234 Ga0501042_0000936 3300049578 Bacteria 16448
235 Ga0501042_0622103 3300049578 Bacteria 785
236 Ga0501043_0157052 3300049579 Bacteria 1779
237 Ga0501046_0141556 3300049580 Bacteria 1820
238 Ga0501046_0706695 3300049580 Bacteria 710
239 Ga0501048_0053342 3300049582 Bacteria 2876
240 Ga0501048_0541743 3300049582 Bacteria 835
241 Ga0501068_0261194 3300049584 Bacteria 1105
242 Ga0501070_0385888 3300049586 Bacteria 1134
243 Ga0501073_0360241 3300049589 Bacteria 1004
244 Ga0501074_0118995 3300049590 Bacteria 1889
245 Ga0501075_0101570 3300049591 Bacteria 2184
246 Ga0501076_1134846 3300049592 Bacteria 643
247 Ga0501077_0223054 3300049593 Bacteria 1198
248 Ga0501077_0437635 3300049593 Bacteria 837
249 Ga0501233_113408 3300049668 Bacteria 727
250 Ga0501079_0367742 3300049741 Bacteria 1127
251 Ga0501265_073382 3300049762 Bacteria 582
252 Ga0501035_0860670 3300049822 Bacteria 720
253 Ga0501044_0123848 3300049823 Bacteria 2583
254 Ga0501044_0306493 3300049823 Bacteria 1515
255 Ga0501045_0694762 3300049824 Bacteria 751
256 nmdc:mga00v17_331510_c1 3300050491 Bacteria 989
257 nmdc:mga0k408_455537_c1 3300050493 Bacteria 760
258 nmdc:mga06z11_133827_c1 3300050494 Bacteria 1395
259 nmdc:mga04h51_67448_c1 3300050495 Bacteria 1241
260 nmdc:mga07m45_4265_c1 3300050496 Bacteria 6168
261 nmdc:mga05p37_589936_c1 3300050507 Bacteria 1256
262 nmdc:mga05p37_7693_c1 3300050507 Bacteria 12716
263 nmdc:mga09592_18010_c1 3300050508 Bacteria 5789
264 nmdc:mga09592_2459_c1 3300050508 Bacteria 14953
265 nmdc:mga09592_32158_c1 3300050508 Bacteria 4373
266 nmdc:mga09592_48291_c1 3300050508 Bacteria 3588
267 nmdc:mga0qj67_116043_c1 3300050509 Bacteria 2163
268 nmdc:mga0qj67_39232_c1 3300050509 Bacteria 3718
269 nmdc:mga06r32_23351_c1 3300050510 Bacteria 5721
270 nmdc:mga06r32_27642_c1 3300050510 Bacteria 5303
271 nmdc:mga06r32_52267_c1 3300050510 Bacteria 3913
272 nmdc:mga06r32_7143_c1 3300050510 Bacteria 10063
273 nmdc:mga06r32_790672_c1 3300050510 Bacteria 910
274 nmdc:mga06r32_85451_c1 3300050510 Bacteria 3076
275 nmdc:mga08y16_13877_c1 3300050511 Bacteria 8477
276 nmdc:mga08y16_14822_c1 3300050511 Bacteria 8197
277 nmdc:mga08y16_238726_c1 3300050511 Bacteria 1879
278 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
279 nmdc:mga08y16_32809_c1 3300050511 Bacteria 5459
280 nmdc:mga0n895_252221_c1 3300050512 Bacteria 1791
281 nmdc:mga0rr50_393599_c1 3300050513 Bacteria 1170
282 nmdc:mga0rr50_90627_c1 3300050513 Bacteria 2380
283 nmdc:mga08x19_70843_c1 3300050514 Bacteria 2272
284 Ga0495601_0218699 3300053077 Bacteria 1244
285 Ga0500611_002233 3300053727 Bacteria 2283
286 Ga0501084_0113550 3300054114 Bacteria 2277
287 Ga0501084_1434510 3300054114 Bacteria 578
288 Ga0590077_027573 3300059426 Bacteria 1231
289 Ga0590077_054884 3300059426 Bacteria 898
290 Ga0501082_0056000 3300060353 Bacteria 3397
291 Ga0501082_0973105 3300060353 Bacteria 742
292 Ga0111539_10000002
293 Ga0065715_10066293
294 Ga0065715_10101623
295 Ga0065715_10149633
296 Ga0065715_10205647
297 Ga0065707_10033305
298 Ga0065707_10107515
299 Ga0065707_10421036
300 Ga0070676_10207894
301 Ga0070676_10869215
302 Ga0070676_11056356
303 Ga0070690_100714474
304 Ga0070670_100453505
305 Ga0068869_100542205
306 Ga0070666_10088971
307 Ga0068868_100302549
308 Ga0070660_100321145
309 Ga0070689_100349007
310 Ga0070691_10611048
311 Ga0070687_100118636
312 Ga0070687_100176916
313 Ga0070687_100385907
314 Ga0070669_100613737
315 Ga0070669_101414495
316 Ga0070675_100006481
317 Ga0070675_100179059
318 Ga0070675_100482180
319 Ga0070671_100060167
320 Ga0070671_100742874
321 Ga0070674_100044222
322 Ga0070673_100035133
323 Ga0070709_10417196
324 Ga0070714_100421746
325 Ga0070701_10010228
326 Ga0070701_10324010
327 Ga0070705_100239965
328 Ga0070705_100722481
329 Ga0070694_101139953
330 Ga0070678_100674784
331 Ga0070662_100180710
332 Ga0070662_100301370
333 Ga0068867_100074640
334 Ga0068867_100135494
335 Ga0070679_101777427
336 Ga0070672_100028928
337 Ga0070686_100015451
338 Ga0070696_100135545
339 Ga0070696_100616138
340 Ga0070696_100931624
341 Ga0070696_101103279
342 Ga0070693_100616439
343 Ga0068855_100797661
344 Ga0068855_101079927
345 Ga0070702_101472689
346 Ga0068852_101686240
347 Ga0068864_100603128
348 Ga0068866_10724264
349 Ga0068861_100033646
350 Ga0068861_100526754
351 Ga0068858_100666145
352 Ga0068860_101069795
353 Ga0068862_100319219
354 Ga0075368_10045624
355 Ga0075364_10372782
356 Ga0070712_100206384
357 Ga0075367_10078933
358 Ga0075366_10274702
359 Ga0097621_100098075
360 Ga0097621_100113839
361 Ga0075370_10084095
362 Ga0068871_100010534
363 Ga0068871_100740767
364 Ga0075428_100000015
365 Ga0075428_100000864
366 Ga0075428_100004122
367 Ga0075428_100197492
368 Ga0075428_100205518
369 Ga0075428_101479048
370 Ga0075430_100012620
371 Ga0075430_100029377
372 Ga0075431_100015802
373 Ga0075431_100031530
374 Ga0075431_100048841
375 Ga0075431_100051300
376 Ga0075431_100085858
377 Ga0075431_100595763
378 Ga0075433_11190605
379 Ga0075429_100007662
380 Ga0075429_100015296
381 Ga0075429_100224961
382 Ga0068865_100016796
383 Ga0075435_100404868
384 Ga0105240_10002932
385 Ga0111539_10001367
386 Ga0111539_10002378
387 Ga0111539_10135205
388 Ga0111539_10380563
389 Ga0111539_10423449
390 Ga0111539_10595601
391 Ga0111539_11391381
392 Ga0114129_10056538
393 Ga0114129_11880295
394 Ga0105243_11169675
395 Ga0105241_10812233
396 Ga0105242_10075495
397 Ga0105242_10638476
398 Ga0105248_10018246
399 Ga0105248_10145229
400 Ga0105248_10432466
401 Ga0105248_10612868
402 Ga0105248_12925792
403 Ga0105238_11292007
404 Ga0105246_10394414
405 Ga0105246_10965538
406 Ga0157374_10402364
407 Ga0163162_10232631
408 Ga0163162_10819652
409 Ga0157375_10310066
410 Ga0157375_10499883
411 Ga0157375_12016909
412 Ga0163163_10377261
413 Ga0163163_11043137
414 Ga0157380_10436628
415 Ga0157380_10642021
416 Ga0157380_10985219
417 Ga0157377_10024038
418 Ga0157376_10243718
419 Ga0163161_11582515
420 Ga0206356_11802134
421 Ga0206353_11926413
422 Ga0224712_10158672
423 Ga0207697_10101756
424 Ga0207642_10120481
425 Ga0207680_10083297
426 Ga0207645_10190017
427 Ga0207654_11072065
428 Ga0207707_10507986
429 Ga0207695_10014731
430 Ga0207662_10013464
431 Ga0207657_10053799
432 Ga0207659_10000086
433 Ga0207659_10007168
434 Ga0207659_10457243
435 Ga0207644_10733487
436 Ga0207690_11020827
437 Ga0207706_11382121
438 Ga0207670_10132528
439 Ga0207670_10715085
440 Ga0207669_10451080
441 Ga0207669_10536601
442 Ga0207704_10008968
443 Ga0207691_10023578
444 Ga0207691_10030895
445 Ga0207711_10019964
446 Ga0207689_10172764
447 Ga0207689_10461675
448 Ga0207689_11342016
449 Ga0207667_10673043
450 Ga0207651_10004480
451 Ga0207651_10092248
452 Ga0207651_10472732
453 Ga0207658_10429822
454 Ga0207677_10097986
455 Ga0207677_10281550
456 Ga0207703_10178720
457 Ga0207641_10526834
458 Ga0207648_10238541
459 Ga0207648_10261490
460 Ga0207675_100030943
461 Ga0207683_10965161
462 Ga0209967_1045304
463 Ga0210002_1042915
464 Ga0209983_1057902
465 Ga0209813_10125246
466 Ga0209974_10054437
467 Ga0207428_10000004
468 Ga0207428_10005509
469 Ga0207428_10133469
470 Ga0207428_10308915
471 Ga0265339_10021958
472 Ga0307408_100004139
473 Ga0307408_100636314
474 Ga0307408_102078772
475 Ga0307405_10242523
476 Ga0307405_10502313
477 Ga0307413_10446062
478 Ga0307410_11384976
479 Ga0307409_100413892
480 Ga0307409_101503591
481 Ga0307416_100050126
482 Ga0307416_100109354
483 Ga0307411_11702760
484 Ga0307415_100111175
485 Ga0373936_0348247
486 Ga0373961_0114571
487 Ga0373931_0080043
488 Ga0373933_0111433
489 Ga0373947_0043024
490 Ga0373937_0036658
491 Ga0395900_1466721
492 Ga0439453_0075554
493 Ga0439461_0010759
494 Ga0439433_0099862
495 Ga0439463_142431
496 Ga0450896_085540
497 Ga0439434_0045144
498 Ga0439435_0067156
499 Ga0439435_0162760
500 Ga0439464_0002172
501 Ga0495605_0417924
502 Ga0495584_0242269
503 Ga0495584_0488940
504 Ga0495594_0178769
505 Ga0495608_0255371
506 Ga0495644_0251991
507 Ga0495586_0291720
508 Ga0495633_0113249
509 Ga0495634_0107348
510 Ga0495634_0310844
511 Ga0495659_0021453
512 Ga0495669_0137118
513 Ga0495604_0506299
514 Ga0495680_0209808
515 Ga0495684_0222578
516 Ga0496104_0062533
517 Ga0501299_014361
518 Ga0501033_0009537
519 Ga0501033_0236989
520 Ga0501034_0810538
521 Ga0501036_1072014
522 Ga0501038_0721978
523 Ga0501040_0069958
524 Ga0501041_0008772
525 Ga0501042_0000936
526 Ga0501042_0622103
527 Ga0501043_0157052
528 Ga0501046_0141556
529 Ga0501046_0706695
530 Ga0501048_0053342
531 Ga0501048_0541743
532 Ga0501068_0261194
533 Ga0501070_0385888
534 Ga0501073_0360241
535 Ga0501074_0118995
536 Ga0501075_0101570
537 Ga0501076_1134846
538 Ga0501077_0223054
539 Ga0501077_0437635
540 Ga0501233_113408
541 Ga0501079_0367742
542 Ga0501265_073382
543 Ga0501035_0860670
544 Ga0501044_0123848
545 Ga0501044_0306493
546 Ga0501045_0694762
547 nmdc:mga00v17_331510_c1
548 nmdc:mga0k408_455537_c1
549 nmdc:mga06z11_133827_c1
550 nmdc:mga04h51_67448_c1
551 nmdc:mga07m45_4265_c1
552 nmdc:mga05p37_589936_c1
553 nmdc:mga05p37_7693_c1
554 nmdc:mga09592_18010_c1
555 nmdc:mga09592_2459_c1
556 nmdc:mga09592_32158_c1
557 nmdc:mga09592_48291_c1
558 nmdc:mga0qj67_116043_c1
559 nmdc:mga0qj67_39232_c1
560 nmdc:mga06r32_23351_c1
561 nmdc:mga06r32_27642_c1
562 nmdc:mga06r32_52267_c1
563 nmdc:mga06r32_7143_c1
564 nmdc:mga06r32_790672_c1
565 nmdc:mga06r32_85451_c1
566 nmdc:mga08y16_13877_c1
567 nmdc:mga08y16_14822_c1
568 nmdc:mga08y16_238726_c1
569 nmdc:mga08y16_2_c1
570 nmdc:mga08y16_32809_c1
571 nmdc:mga0n895_252221_c1
572 nmdc:mga0rr50_393599_c1
573 nmdc:mga0rr50_90627_c1
574 nmdc:mga08x19_70843_c1
575 Ga0495601_0218699
576 Ga0500611_002233
577 Ga0501084_0113550
578 Ga0501084_1434510
579 Ga0590077_027573
580 Ga0590077_054884
581 Ga0501082_0056000
582 Ga0501082_0973105

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02627

CMD

Carboxymuconolactone decarboxylase family

30

112

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9676 10 135
2ijc-assembly2.cif.gz_I structure of a conserved protein of unknown function pa0269 from pseudomonas aeruginosa 0.9572 1 141
2ijc-assembly2.cif.gz_I structure of a conserved protein of unknown function pa0269 from pseudomonas aeruginosa 0.9253 1 141
2gmy-assembly1.cif.gz_C crystal structure of a protein of unknown function atu0492 from agrobacterium tumefaciens, putative antioxidant defence protein ahpd 0.9131 2 146
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9112 10 135
ID Description Score Start End Superfamily
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9346 2 141 1.20.1290.10
af_Q2FVE0_2_139_1.20.1290.10 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9309 14 137 1.20.1290.10
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9281 2 141 1.20.1290.10
2o4dA00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9278 2 141 1.20.1290.10
2gmyF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9193 2 146 1.20.1290.10
ID Description Score Start End GO Terms
AF-A0A5N3P4I3-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9764 39 141 GO:0051920
AF-A0A7W8RZQ1-F1-model_v4 AhpD family alkylhydroperoxidase 0.9761 40 141 GO:0051920
AF-A0A731Z005-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9754 36 139 GO:0051920
AF-A0A1H7BKH5-F1-model_v4 Alkylhydroperoxidase AhpD family core domain-containing protein 0.9717 1 141 GO:0051920
AF-A0A679JAJ8-F1-model_v4 Alkyl hydroperoxide reductase AhpD (EC 1.11.1.15) 0.9717 1 141 GO:0051920

Map