F390179

General Info

Members Datasets Scaffolds Average Seq Length
291 227 582 479

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100112995|Ga0068868_1001129952
Length 523
Sequence MAKDGSGLAATDWKARRSPVNTGASFAMSPQVADGRVLGIQRKLHKWASEDQDRRFSDLHNLVCDPATLQVAWRRVRGNRGSRSAGIDGQTAYEIETRQGVERFLGELREELRAGTFGPLAVKERAIPKRSGKLRYLGIPTVRDRVVQAALKLVLEPIFEVDFQPCSYGFRPGRRTQDALAEIQHFTFRSYEWIVEGDIEACFDRIDHTALMDRVRRRIKDKRVLALIKAFLNAGVLKQHGDLARSVTGTPQGGILSPLLANIALGALDEHFARAWQAMGTVSQRYSARKRGEATYRLVRYADDFVICVAGTRQHAEALAADTAHVLRLLGLTLSLEKTRITHIDEGFDFLGWRVKRDLGRRGRPGIFLFPSKAAFASVKAKIKEITRSGTNQSLDQLLHRINPALRGWCVYFRSGQSSRTFQYLRHYTWRRVLPGWWPTGRDTVLYNPAAVSTTRYRYRGARIETPWQSGRIASRDAVGYLEQLQFLFEDDHWHARGEPDAGELARPVRRAAASRPPRASAA

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
73 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
74 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
75 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
76 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
85 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
86 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
131 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
137 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
138 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
139 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
140 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
141 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
142 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
143 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
144 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
147 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
148 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
149 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
150 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
151 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
152 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
153 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
154 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
155 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
156 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
157 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
158 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
159 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
160 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
161 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
162 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
163 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
164 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
165 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
166 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
167 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
168 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
169 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
170 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
171 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
172 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
173 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
174 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
175 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
176 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
177 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
178 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
179 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
180 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
181 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
182 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
183 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
184 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
185 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
186 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
187 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
188 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
189 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
190 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
191 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
192 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
193 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
194 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
195 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
196 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
197 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
198 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
199 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
200 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
201 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
202 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
203 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
204 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
205 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
206 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
207 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
208 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
209 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
210 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
211 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
212 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
214 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
215 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
216 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
217 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
218 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
219 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
220 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
221 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
222 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
223 2558860280 Kutzneria sp. 744 Isolate Unclassified
224 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
225 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
226 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
227 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.59
Metatranscriptomes 0
Isolates 2.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.41
Nodule 0
Rhizoplane 6.87
Rhizosphere 87.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100112995 3300005338 Bacteria 2208
2 JGI24743J22301_10004699 3300001991 Bacteria 2240
3 JGI24738J21930_10009287 3300002075 Bacteria 2217
4 JGI24034J26672_10003456 3300002239 Bacteria 2205
5 JGI24751J29686_10011874 3300002459 Bacteria 1797
6 JGI25407J50210_10025042 3300003373 Bacteria 1547
7 Ga0070658_10097323 3300005327 Bacteria 2430
8 Ga0070658_10121693 3300005327 Bacteria 2169
9 Ga0070676_10085538 3300005328 Bacteria 1922
10 Ga0070683_100225164 3300005329 Bacteria 1782
11 Ga0070690_100064849 3300005330 Bacteria 2361
12 Ga0070670_100093890 3300005331 Bacteria 2580
13 Ga0068869_100055333 3300005334 Bacteria 2891
14 Ga0070666_10074380 3300005335 Bacteria 2315
15 Ga0070680_100170169 3300005336 Bacteria 1833
16 Ga0068868_100033330 3300005338 Bacteria 3969
17 Ga0070660_100096626 3300005339 Bacteria 2336
18 Ga0070687_100041922 3300005343 Bacteria 2316
19 Ga0070692_10037288 3300005345 Bacteria 2471
20 Ga0070668_100029232 3300005347 Bacteria 4184
21 Ga0070675_100151457 3300005354 Bacteria 1989
22 Ga0070673_100091222 3300005364 Bacteria 2491
23 Ga0070688_100041277 3300005365 Bacteria 2831
24 Ga0070659_100052399 3300005366 Bacteria 3209
25 Ga0070659_100100898 3300005366 Bacteria 2323
26 Ga0070667_100165110 3300005367 Bacteria 1952
27 Ga0070714_100088453 3300005435 Bacteria 2710
28 Ga0070710_10072447 3300005437 Bacteria 1989
29 Ga0070663_100069961 3300005455 Bacteria 2551
30 Ga0070662_100059949 3300005457 Bacteria 2773
31 Ga0070662_100096982 3300005457 Bacteria 2225
32 Ga0068867_100098851 3300005459 Bacteria 2226
33 Ga0070707_100081420 3300005468 Bacteria 3126
34 Ga0070707_100111069 3300005468 Bacteria 2658
35 Ga0070699_100107959 3300005518 Bacteria 2442
36 Ga0070679_100154780 3300005530 Bacteria 2268
37 Ga0070684_100164741 3300005535 Bacteria 2012
38 Ga0070684_100246482 3300005535 Bacteria 1633
39 Ga0068853_100235089 3300005539 Bacteria 1678
40 Ga0070672_100145444 3300005543 Bacteria 1958
41 Ga0070686_100117439 3300005544 Bacteria 1821
42 Ga0070665_100127211 3300005548 Bacteria 2550
43 Ga0068855_100174034 3300005563 Bacteria 2437
44 Ga0068857_100172791 3300005577 Bacteria 1964
45 Ga0068854_100032021 3300005578 Bacteria 3656
46 Ga0068854_100056022 3300005578 Bacteria 2840
47 Ga0068856_100049121 3300005614 Bacteria 4158
48 Ga0070702_100040368 3300005615 Bacteria 2610
49 Ga0070702_100064945 3300005615 Bacteria 2136
50 Ga0068852_100121128 3300005616 Bacteria 2395
51 Ga0068852_100139001 3300005616 Bacteria 2246
52 Ga0068859_100074120 3300005617 Bacteria 3442
53 Ga0068859_100148410 3300005617 Bacteria 2420
54 Ga0068859_100178577 3300005617 Bacteria 2205
55 Ga0068864_100214374 3300005618 Bacteria 1774
56 Ga0068861_100172146 3300005719 Bacteria 1795
57 Ga0068863_100033859 3300005841 Bacteria 4867
58 Ga0068858_100089673 3300005842 Bacteria 2861
59 Ga0068860_100138419 3300005843 Bacteria 2339
60 Ga0068862_100127444 3300005844 Bacteria 2248
61 Ga0081538_10053601 3300005981 Bacteria 2396
62 Ga0081539_10041580 3300005985 Bacteria 2685
63 Ga0075368_10022798 3300006042 Bacteria 2385
64 Ga0075367_10050008 3300006178 Bacteria 2466
65 Ga0068871_100084335 3300006358 Bacteria 2637
66 Ga0075428_100131470 3300006844 Bacteria 2722
67 Ga0075433_10132883 3300006852 Bacteria 2211
68 Ga0075434_100016245 3300006871 Bacteria 7154
69 Ga0068865_100128897 3300006881 Bacteria 1893
70 Ga0097620_100074119 3300006931 Bacteria 3442
71 Ga0097620_100148414 3300006931 Bacteria 2420
72 Ga0097620_100178580 3300006931 Bacteria 2205
73 Ga0075435_100032257 3300007076 Bacteria 4135
74 Ga0105251_10047323 3300009011 Bacteria 2067
75 Ga0105245_10067459 3300009098 Bacteria 3240
76 Ga0105245_10104887 3300009098 Bacteria 2621
77 Ga0105245_10135978 3300009098 Bacteria 2310
78 Ga0105245_10199725 3300009098 Bacteria 1920
79 Ga0105247_10046348 3300009101 Bacteria 2668
80 Ga0114129_10247626 3300009147 Bacteria 2393
81 Ga0114129_10320773 3300009147 Bacteria 2059
82 Ga0114129_10324269 3300009147 Bacteria 2047
83 Ga0105243_10107996 3300009148 Bacteria 2322
84 Ga0105243_10159508 3300009148 Bacteria 1943
85 Ga0105241_10174459 3300009174 Bacteria 1778
86 Ga0105242_10098175 3300009176 Bacteria 2477
87 Ga0105248_10149947 3300009177 Bacteria 2631
88 Ga0105248_10281307 3300009177 Bacteria 1873
89 Ga0105237_10133436 3300009545 Bacteria 2478
90 Ga0105238_10088085 3300009551 Bacteria 3091
91 Ga0105249_10056397 3300009553 Bacteria 3597
92 Ga0105148_100070 3300009978 Bacteria 15919
93 Ga0105029_100048 3300009984 Bacteria 5519
94 Ga0105033_100091 3300009986 Bacteria 6940
95 Ga0105035_100246 3300009988 Bacteria 3579
96 Ga0105028_100105 3300009993 Bacteria 8778
97 Ga0105239_10147655 3300010375 Bacteria 2623
98 Ga0105239_10318385 3300010375 Bacteria 1754
99 Ga0105246_10063083 3300011119 Bacteria 2583
100 Ga0157371_10100301 3300013102 Bacteria 2053
101 Ga0157369_10232318 3300013105 Bacteria 1928
102 Ga0157374_10067889 3300013296 Bacteria 3353
103 Ga0157372_10164895 3300013307 Bacteria 2562
104 Ga0157375_10114110 3300013308 Bacteria 2803
105 Ga0157515_153953 3300013875 Bacteria 8272
106 Ga0163163_10103626 3300014325 Bacteria 2870
107 Ga0157380_10046610 3300014326 Bacteria 3406
108 Ga0157380_10113999 3300014326 Bacteria 2277
109 Ga0157377_10035254 3300014745 Bacteria 2743
110 Ga0157379_10137686 3300014968 Bacteria 2200
111 Ga0163161_10061754 3300017792 Bacteria 2728
112 Ga0207653_10005301 3300025885 Bacteria 4029
113 Ga0207710_10025864 3300025900 Bacteria 2535
114 Ga0207688_10045894 3300025901 Bacteria 2438
115 Ga0207680_10019216 3300025903 Bacteria 3649
116 Ga0207645_10047018 3300025907 Bacteria 2756
117 Ga0207643_10050547 3300025908 Bacteria 2357
118 Ga0207684_10022129 3300025910 Bacteria 5429
119 Ga0207654_10059216 3300025911 Bacteria 2233
120 Ga0207671_10089417 3300025914 Bacteria 2318
121 Ga0207693_10101857 3300025915 Bacteria 2252
122 Ga0207660_10144122 3300025917 Bacteria 1824
123 Ga0207662_10096987 3300025918 Bacteria 1822
124 Ga0207657_10100415 3300025919 Bacteria 2402
125 Ga0207657_10156537 3300025919 Bacteria 1853
126 Ga0207652_10119411 3300025921 Bacteria 2345
127 Ga0207646_10109409 3300025922 Bacteria 2479
128 Ga0207650_10061921 3300025925 Bacteria 2794
129 Ga0207659_10083471 3300025926 Bacteria 2368
130 Ga0207687_10091334 3300025927 Bacteria 2221
131 Ga0207690_10053833 3300025932 Bacteria 2702
132 Ga0207690_10069734 3300025932 Bacteria 2419
133 Ga0207690_10082864 3300025932 Bacteria 2244
134 Ga0207706_10102195 3300025933 Bacteria 2522
135 Ga0207706_10107494 3300025933 Bacteria 2455
136 Ga0207686_10082813 3300025934 Bacteria 2098
137 Ga0207709_10069722 3300025935 Bacteria 2227
138 Ga0207670_10074755 3300025936 Bacteria 2353
139 Ga0207704_10061513 3300025938 Bacteria 2330
140 Ga0207704_10062980 3300025938 Bacteria 2309
141 Ga0207689_10078478 3300025942 Bacteria 2713
142 Ga0207689_10153186 3300025942 Bacteria 1900
143 Ga0207689_10165603 3300025942 Bacteria 1821
144 Ga0207667_10211773 3300025949 Bacteria 1986
145 Ga0207668_10070300 3300025972 Bacteria 2495
146 Ga0207640_10034661 3300025981 Bacteria 3152
147 Ga0207640_10064286 3300025981 Bacteria 2442
148 Ga0207677_10086698 3300026023 Bacteria 2264
149 Ga0207703_10136317 3300026035 Bacteria 2125
150 Ga0207639_10071856 3300026041 Bacteria 2708
151 Ga0207678_10091333 3300026067 Bacteria 2602
152 Ga0207708_10080071 3300026075 Bacteria 2510
153 Ga0207702_10133301 3300026078 Bacteria 2238
154 Ga0207641_10136604 3300026088 Bacteria 2207
155 Ga0207648_10101660 3300026089 Bacteria 2519
156 Ga0207648_10124840 3300026089 Bacteria 2264
157 Ga0207676_10111103 3300026095 Bacteria 2293
158 Ga0207675_100114493 3300026118 Bacteria 2547
159 Ga0207683_10135261 3300026121 Bacteria 2219
160 Ga0207683_10205203 3300026121 Bacteria 1792
161 Ga0207698_10120113 3300026142 Bacteria 2222
162 Ga0209813_10001339 3300027866 Bacteria 5520
163 Ga0207428_10134338 3300027907 Bacteria 1892
164 Ga0268266_10088928 3300028379 Bacteria 2703
165 Ga0268264_10121298 3300028381 Bacteria 2304
166 Ga0307515_10173234 3300028794 Bacteria 2140
167 Ga0265327_10001374 3300031251 Bacteria 31238
168 Ga0307408_100138498 3300031548 Bacteria 1907
169 Ga0307508_10101917 3300031616 Bacteria 2467
170 Ga0307405_10073526 3300031731 Bacteria 2207
171 Ga0307405_10100692 3300031731 Bacteria 1937
172 Ga0307413_10087388 3300031824 Bacteria 2019
173 Ga0307413_10104655 3300031824 Bacteria 1879
174 Ga0307410_10052750 3300031852 Bacteria 2748
175 Ga0307410_10110506 3300031852 Bacteria 1988
176 Ga0307406_10075765 3300031901 Bacteria 2220
177 Ga0307407_10048958 3300031903 Bacteria 2409
178 Ga0307412_10151550 3300031911 Bacteria 1711
179 Ga0307409_100108445 3300031995 Bacteria 2322
180 Ga0307409_100111305 3300031995 Bacteria 2296
181 Ga0307416_100199580 3300032002 Bacteria 1896
182 Ga0307414_10068522 3300032004 Bacteria 2546
183 Ga0307411_10160608 3300032005 Bacteria 1682
184 Ga0307415_100013000 3300032126 Bacteria 4840
185 Ga0307415_100069786 3300032126 Bacteria 2465
186 Ga0307415_100072467 3300032126 Bacteria 2426
187 Ga0307415_100075913 3300032126 Bacteria 2380
188 Ga0373930_0004840 3300034816 Bacteria 2212
189 Ga0373926_0000950 3300035083 Bacteria 8402
190 Ga0373944_0005387 3300035089 Bacteria 3368
191 Ga0373923_0048111 3300035111 Bacteria 1780
192 Ga0373923_0054691 3300035111 Bacteria 1681
193 Ga0373936_0007368 3300035113 Bacteria 4140
194 Ga0373939_0010236 3300035114 Bacteria 2340
195 Ga0373956_0034759 3300035119 Bacteria 2220
196 Ga0373957_0032413 3300035120 Bacteria 1924
197 Ga0373943_0000152 3300035170 Bacteria 26886
198 Ga0373946_0000225 3300035171 Bacteria 17682
199 Ga0373942_0012591 3300035207 Bacteria 2024
200 Ga0373935_0000217 3300035692 Bacteria 27715
201 Ga0373935_0107935 3300035692 Bacteria 1844
202 Ga0373927_0001097 3300035695 Bacteria 20598
203 Ga0373933_0007078 3300035724 Bacteria 6112
204 Ga0373947_0000847 3300035725 Bacteria 18495
205 Ga0373947_0008087 3300035725 Bacteria 6063
206 Ga0373937_0067204 3300036401 Bacteria 3302
207 Ga0373925_0001291 3300037068 Bacteria 22021
208 Ga0373925_0076635 3300037068 Bacteria 2536
209 Ga0373925_0117025 3300037068 Bacteria 2065
210 Ga0436363_0140698 3300039450 Bacteria 2366
211 Ga0436363_0930302 3300039450 Bacteria 2436
212 Ga0439440_0008378 3300042993 Bacteria 2121
213 Ga0466963_0068461 3300044694 Bacteria 2384
214 Ga0466971_0050687 3300044719 Bacteria 1868
215 Ga0466960_0030362 3300044901 Bacteria 2486
216 Ga0466967_0130824 3300045976 Bacteria 2329
217 Ga0466967_0310030 3300045976 Bacteria 1520
218 Ga0495627_001528 3300046453 Bacteria 13279
219 Ga0495627_015689 3300046453 Bacteria 2609
220 Ga0495592_0078720 3300046454 Bacteria 2387
221 Ga0495629_0127491 3300046459 Bacteria 1773
222 Ga0495641_0013946 3300046461 Bacteria 4377
223 Ga0495651_0012621 3300046462 Bacteria 6520
224 Ga0495651_0074310 3300046462 Bacteria 2579
225 Ga0495653_0003229 3300046463 Bacteria 13071
226 Ga0495653_0040689 3300046463 Bacteria 3631
227 Ga0495664_0001536 3300046477 Bacteria 12212
228 Ga0495608_0044628 3300046511 Bacteria 2958
229 Ga0495608_0053736 3300046511 Bacteria 2664
230 Ga0495628_0078409 3300046516 Bacteria 2569
231 Ga0495652_0003177 3300046529 Bacteria 16378
232 Ga0495587_0052697 3300046536 Bacteria 2400
233 Ga0495645_0056264 3300046543 Bacteria 2856
234 Ga0495645_0111968 3300046543 Bacteria 1930
235 Ga0495633_0007374 3300046558 Bacteria 6335
236 Ga0495667_0067568 3300046559 Bacteria 2335
237 Ga0495634_0048970 3300046642 Bacteria 2843
238 Ga0495635_0000619 3300046663 Bacteria 22842
239 Ga0495657_0033615 3300046675 Bacteria 3569
240 Ga0495613_0144387 3300046689 Bacteria 1699
241 Ga0495624_0002083 3300046690 Bacteria 15253
242 Ga0495624_0063578 3300046690 Bacteria 2307
243 Ga0495581_0010324 3300047315 Bacteria 5402
244 Ga0495604_0081195 3300047317 Bacteria 2428
245 Ga0495636_0029400 3300047318 Bacteria 2243
246 Ga0495674_0000578 3300047319 Bacteria 34250
247 Ga0495674_0049013 3300047319 Bacteria 3735
248 Ga0495674_0104381 3300047319 Bacteria 2409
249 Ga0495680_0003901 3300047322 Bacteria 14426
250 Ga0495684_0002330 3300047471 Bacteria 15193
251 Ga0495593_0093120 3300047673 Bacteria 1551
252 Ga0495602_0063286 3300048088 Bacteria 3206
253 Ga0496100_0079803 3300048903 Bacteria 2206
254 Ga0496101_0092320 3300048904 Bacteria 2254
255 Ga0496102_0198275 3300048905 Bacteria 1892
256 Ga0496104_0147394 3300048907 Bacteria 2260
257 Ga0496106_0095897 3300048909 Bacteria 2295
258 Ga0496106_0118118 3300048909 Bacteria 2070
259 Ga0496108_0077797 3300048911 Bacteria 2806
260 Ga0496108_0282345 3300048911 Bacteria 1445
261 Ga0496109_0146099 3300048912 Bacteria 2212
262 Ga0496110_0013584 3300048913 Bacteria 6740
263 Ga0496110_0058831 3300048913 Bacteria 3385
264 Ga0496111_0072673 3300048914 Bacteria 2503
265 Ga0496111_0090748 3300048914 Bacteria 2238
266 Ga0496112_0123665 3300048915 Bacteria 2558
267 Ga0496112_0131244 3300048915 Bacteria 2476
268 Ga0496113_0068598 3300048916 Bacteria 2691
269 Ga0496113_0106966 3300048916 Bacteria 2173
270 Ga0496113_0117974 3300048916 Bacteria 2072
271 Ga0496114_0089288 3300048917 Bacteria 2615
272 Ga0496114_0113457 3300048917 Bacteria 2323
273 Ga0496126_0171461 3300048929 Bacteria 1848
274 Ga0501046_0039197 3300049580 Bacteria 3796
275 Ga0501271_001271 3300049768 Bacteria 2145
276 nmdc:mga06z11_47686_c1 3300050494 Bacteria 2177
277 nmdc:mga04h51_12493_c1 3300050495 Bacteria 2385
278 nmdc:mga05p37_263214_c1 3300050507 Bacteria 2063
279 nmdc:mga05p37_66451_c1 3300050507 Bacteria 4436
280 nmdc:mga0n895_19101_c1 3300050512 Bacteria 6363
281 nmdc:mga0rr50_6111_c1 3300050513 Bacteria 7283
282 Ga0500643_002900 3300053087 Bacteria 8523
283 Ga0500652_006780 3300053131 Bacteria 3708
284 Ga0590077_007129 3300059426 Bacteria 2289
285 2523385598 2523231044 Bacteria 6434991
286 2559423888 2558860280 Bacteria 11429938
287 2585304496 2582581313 Bacteria 10042643
288 2785372891 2784746768 Bacteria 10036182
289 2837183460 2837183177 Bacteria 4637169
290 2837183549 2837183177 Bacteria 4637169
291 2895448243 2895442618 Bacteria 11027144
292 Ga0068868_100112995
293 JGI24743J22301_10004699
294 JGI24738J21930_10009287
295 JGI24034J26672_10003456
296 JGI24751J29686_10011874
297 JGI25407J50210_10025042
298 Ga0070658_10097323
299 Ga0070658_10121693
300 Ga0070676_10085538
301 Ga0070683_100225164
302 Ga0070690_100064849
303 Ga0070670_100093890
304 Ga0068869_100055333
305 Ga0070666_10074380
306 Ga0070680_100170169
307 Ga0068868_100033330
308 Ga0070660_100096626
309 Ga0070687_100041922
310 Ga0070692_10037288
311 Ga0070668_100029232
312 Ga0070675_100151457
313 Ga0070673_100091222
314 Ga0070688_100041277
315 Ga0070659_100052399
316 Ga0070659_100100898
317 Ga0070667_100165110
318 Ga0070714_100088453
319 Ga0070710_10072447
320 Ga0070663_100069961
321 Ga0070662_100059949
322 Ga0070662_100096982
323 Ga0068867_100098851
324 Ga0070707_100081420
325 Ga0070707_100111069
326 Ga0070699_100107959
327 Ga0070679_100154780
328 Ga0070684_100164741
329 Ga0070684_100246482
330 Ga0068853_100235089
331 Ga0070672_100145444
332 Ga0070686_100117439
333 Ga0070665_100127211
334 Ga0068855_100174034
335 Ga0068857_100172791
336 Ga0068854_100032021
337 Ga0068854_100056022
338 Ga0068856_100049121
339 Ga0070702_100040368
340 Ga0070702_100064945
341 Ga0068852_100121128
342 Ga0068852_100139001
343 Ga0068859_100074120
344 Ga0068859_100148410
345 Ga0068859_100178577
346 Ga0068864_100214374
347 Ga0068861_100172146
348 Ga0068863_100033859
349 Ga0068858_100089673
350 Ga0068860_100138419
351 Ga0068862_100127444
352 Ga0081538_10053601
353 Ga0081539_10041580
354 Ga0075368_10022798
355 Ga0075367_10050008
356 Ga0068871_100084335
357 Ga0075428_100131470
358 Ga0075433_10132883
359 Ga0075434_100016245
360 Ga0068865_100128897
361 Ga0097620_100074119
362 Ga0097620_100148414
363 Ga0097620_100178580
364 Ga0075435_100032257
365 Ga0105251_10047323
366 Ga0105245_10067459
367 Ga0105245_10104887
368 Ga0105245_10135978
369 Ga0105245_10199725
370 Ga0105247_10046348
371 Ga0114129_10247626
372 Ga0114129_10320773
373 Ga0114129_10324269
374 Ga0105243_10107996
375 Ga0105243_10159508
376 Ga0105241_10174459
377 Ga0105242_10098175
378 Ga0105248_10149947
379 Ga0105248_10281307
380 Ga0105237_10133436
381 Ga0105238_10088085
382 Ga0105249_10056397
383 Ga0105148_100070
384 Ga0105029_100048
385 Ga0105033_100091
386 Ga0105035_100246
387 Ga0105028_100105
388 Ga0105239_10147655
389 Ga0105239_10318385
390 Ga0105246_10063083
391 Ga0157371_10100301
392 Ga0157369_10232318
393 Ga0157374_10067889
394 Ga0157372_10164895
395 Ga0157375_10114110
396 Ga0157515_153953
397 Ga0163163_10103626
398 Ga0157380_10046610
399 Ga0157380_10113999
400 Ga0157377_10035254
401 Ga0157379_10137686
402 Ga0163161_10061754
403 Ga0207653_10005301
404 Ga0207710_10025864
405 Ga0207688_10045894
406 Ga0207680_10019216
407 Ga0207645_10047018
408 Ga0207643_10050547
409 Ga0207684_10022129
410 Ga0207654_10059216
411 Ga0207671_10089417
412 Ga0207693_10101857
413 Ga0207660_10144122
414 Ga0207662_10096987
415 Ga0207657_10100415
416 Ga0207657_10156537
417 Ga0207652_10119411
418 Ga0207646_10109409
419 Ga0207650_10061921
420 Ga0207659_10083471
421 Ga0207687_10091334
422 Ga0207690_10053833
423 Ga0207690_10069734
424 Ga0207690_10082864
425 Ga0207706_10102195
426 Ga0207706_10107494
427 Ga0207686_10082813
428 Ga0207709_10069722
429 Ga0207670_10074755
430 Ga0207704_10061513
431 Ga0207704_10062980
432 Ga0207689_10078478
433 Ga0207689_10153186
434 Ga0207689_10165603
435 Ga0207667_10211773
436 Ga0207668_10070300
437 Ga0207640_10034661
438 Ga0207640_10064286
439 Ga0207677_10086698
440 Ga0207703_10136317
441 Ga0207639_10071856
442 Ga0207678_10091333
443 Ga0207708_10080071
444 Ga0207702_10133301
445 Ga0207641_10136604
446 Ga0207648_10101660
447 Ga0207648_10124840
448 Ga0207676_10111103
449 Ga0207675_100114493
450 Ga0207683_10135261
451 Ga0207683_10205203
452 Ga0207698_10120113
453 Ga0209813_10001339
454 Ga0207428_10134338
455 Ga0268266_10088928
456 Ga0268264_10121298
457 Ga0307515_10173234
458 Ga0265327_10001374
459 Ga0307408_100138498
460 Ga0307508_10101917
461 Ga0307405_10073526
462 Ga0307405_10100692
463 Ga0307413_10087388
464 Ga0307413_10104655
465 Ga0307410_10052750
466 Ga0307410_10110506
467 Ga0307406_10075765
468 Ga0307407_10048958
469 Ga0307412_10151550
470 Ga0307409_100108445
471 Ga0307409_100111305
472 Ga0307416_100199580
473 Ga0307414_10068522
474 Ga0307411_10160608
475 Ga0307415_100013000
476 Ga0307415_100069786
477 Ga0307415_100072467
478 Ga0307415_100075913
479 Ga0373930_0004840
480 Ga0373926_0000950
481 Ga0373944_0005387
482 Ga0373923_0048111
483 Ga0373923_0054691
484 Ga0373936_0007368
485 Ga0373939_0010236
486 Ga0373956_0034759
487 Ga0373957_0032413
488 Ga0373943_0000152
489 Ga0373946_0000225
490 Ga0373942_0012591
491 Ga0373935_0000217
492 Ga0373935_0107935
493 Ga0373927_0001097
494 Ga0373933_0007078
495 Ga0373947_0000847
496 Ga0373947_0008087
497 Ga0373937_0067204
498 Ga0373925_0001291
499 Ga0373925_0076635
500 Ga0373925_0117025
501 Ga0436363_0140698
502 Ga0436363_0930302
503 Ga0439440_0008378
504 Ga0466963_0068461
505 Ga0466971_0050687
506 Ga0466960_0030362
507 Ga0466967_0130824
508 Ga0466967_0310030
509 Ga0495627_001528
510 Ga0495627_015689
511 Ga0495592_0078720
512 Ga0495629_0127491
513 Ga0495641_0013946
514 Ga0495651_0012621
515 Ga0495651_0074310
516 Ga0495653_0003229
517 Ga0495653_0040689
518 Ga0495664_0001536
519 Ga0495608_0044628
520 Ga0495608_0053736
521 Ga0495628_0078409
522 Ga0495652_0003177
523 Ga0495587_0052697
524 Ga0495645_0056264
525 Ga0495645_0111968
526 Ga0495633_0007374
527 Ga0495667_0067568
528 Ga0495634_0048970
529 Ga0495635_0000619
530 Ga0495657_0033615
531 Ga0495613_0144387
532 Ga0495624_0002083
533 Ga0495624_0063578
534 Ga0495581_0010324
535 Ga0495604_0081195
536 Ga0495636_0029400
537 Ga0495674_0000578
538 Ga0495674_0049013
539 Ga0495674_0104381
540 Ga0495680_0003901
541 Ga0495684_0002330
542 Ga0495593_0093120
543 Ga0495602_0063286
544 Ga0496100_0079803
545 Ga0496101_0092320
546 Ga0496102_0198275
547 Ga0496104_0147394
548 Ga0496106_0095897
549 Ga0496106_0118118
550 Ga0496108_0077797
551 Ga0496108_0282345
552 Ga0496109_0146099
553 Ga0496110_0013584
554 Ga0496110_0058831
555 Ga0496111_0072673
556 Ga0496111_0090748
557 Ga0496112_0123665
558 Ga0496112_0131244
559 Ga0496113_0068598
560 Ga0496113_0106966
561 Ga0496113_0117974
562 Ga0496114_0089288
563 Ga0496114_0113457
564 Ga0496126_0171461
565 Ga0501046_0039197
566 Ga0501271_001271
567 nmdc:mga06z11_47686_c1
568 nmdc:mga04h51_12493_c1
569 nmdc:mga05p37_263214_c1
570 nmdc:mga05p37_66451_c1
571 nmdc:mga0n895_19101_c1
572 nmdc:mga0rr50_6111_c1
573 Ga0500643_002900
574 Ga0500652_006780
575 Ga0590077_007129
576 2523385598
577 2559423888
578 2585304496
579 2785372891
580 2837183460
581 2837183549
582 2895448243

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08388

GIIM

Group II intron, maturase-specific domain

376

438

0.95

PF00078

RVT_1

Reverse transcriptase (RNA-dependent DNA polymerase)

127

355

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ar1-assembly2.cif.gz_D structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.8879 38 438
6ar1-assembly1.cif.gz_A structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.8876 38 438
8bgj-assembly2.cif.gz_B crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.8723 115 333
8bgj-assembly3.cif.gz_C crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.843 104 333
5irg-assembly1.cif.gz_D reverse transcriptase domain of group ii intron maturase from roseburia intestinalis in p212121 space group 0.8426 37 354
ID Description Score Start End Superfamily
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9269 107 331 3.30.70.270
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8809 107 324 3.20.20.210
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8567 107 331 3.30.70.270
af_Q54EA8_349_594_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8205 107 335 3.30.70.270
1d0eA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8164 154 333 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A522S6V2-F1-model_v4 Group II intron reverse transcriptase/maturase 0.9822 13 225 GO:0003964
AF-A0A4R3HT95-F1-model_v4 deleted 0.9815 1 396
AF-A0A517Y7Q4-F1-model_v4 Group II intron-encoded protein LtrA 0.981 16 156
AF-A0A316IB24-F1-model_v4 RNA-directed DNA polymerase 0.9803 1 408 GO:0003964
AF-K1SNR9-F1-model_v4 RNA-directed DNA polymerase (Reverse transcriptase) (EC 2.7.7.49) 0.979 13 204 GO:0003720

Map