F390100

General Info

Members Datasets Scaffolds Average Seq Length
290 199 580 512

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995467583
Length 549
Sequence AEPDEAAQPQVPVVEASGITKSFGATVALRDARISVAPGESHALVGRNGAGKSTLVSLLTGMQQPDTGTLTFSGEPAPAFGNTEAWRSKVACVYQRSTVIAELTVAENLFLNRQSERSLRPIRWKALRSRAAALLAEYSVDVDPSVRIADLTVEQRQFVEIARALSFGARFIILDEPTAKLDARGIERLFAKLRHLQAQGVAFLFISHHLQEVYDLCTRVTVYRDARHILTASVADLGHDALVEAMTGESVGGPVLAKATSAAPESTDVSGRSPESVLELDGLTLPGRYEEVTLAVRRGEVVGLAGATASGNVQVGETVAGLHRTRIGRLAVTGRELRTGDIPAALTAGVGFVPEDRHLQGLVVGRSVAENATLTVTDQLGPYGTVLPSRTRVFAQRMIDDLDIKTPDAATPVGALSGGNQQKVVVARALATEPQLLVAIRPTNGVDIKSKEFLLGRFRQHAESGRAALIVSDELDDLRSCDRVVAMFHGRVVGEFAAGWTDEQLVAAMEGMGATHEDTTEQTHETNDPHDTYSHTHDAKERSRDGGHD

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
27 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
28 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
29 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
30 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
53 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
54 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
63 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
70 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
71 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
72 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
73 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
74 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
75 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
76 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
77 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
78 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
79 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
80 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
81 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
125 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
136 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
137 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
138 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
139 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
140 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
141 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
144 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
145 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
148 2558860280 Kutzneria sp. 744 Isolate Unclassified
149 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
150 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
151 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
152 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
153 2643221714 Streptomyces sp. Root264 Isolate Unclassified
154 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
155 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
156 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
157 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
158 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
159 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
160 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
161 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
162 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
163 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
164 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
165 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
166 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
167 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
168 2867428634 Streptomyces sp. RP5T Isolate Unclassified
169 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
170 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
171 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
172 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
173 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
174 2891562705 Microbispora tritici MT50 Isolate Unclassified
175 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
176 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
177 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
178 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
179 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
180 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
181 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
182 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
183 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
184 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
185 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
186 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
187 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
188 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
189 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
190 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
191 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
192 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
193 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
194 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
195 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
196 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
197 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
198 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
199 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.59
Metatranscriptomes 0.34
Isolates 22.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.17
Nodule 1.38
Rhizoplane 0
Rhizosphere 76.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10028051 3300001990 Bacteria 1772
2 JGI24738J21930_10006882 3300002075 Bacteria 2641
3 rootH1_10012277 3300003316 Bacteria 2132
4 Ga0070668_100000180 3300005347 Bacteria 40892
5 Ga0070668_100002726 3300005347 Bacteria 12994
6 Ga0070714_100004149 3300005435 Bacteria 10890
7 Ga0070710_10000034 3300005437 Bacteria 63340
8 Ga0070684_100048688 3300005535 Bacteria 3677
9 Ga0068853_100068628 3300005539 Bacteria 3082
10 Ga0068853_100088212 3300005539 Bacteria 2723
11 Ga0070665_100080700 3300005548 Bacteria 3259
12 Ga0068855_100008688 3300005563 Bacteria 12279
13 Ga0068855_100009579 3300005563 Bacteria 11688
14 Ga0068854_100022768 3300005578 Bacteria 4274
15 Ga0068856_100041591 3300005614 Bacteria 4518
16 Ga0068852_100066761 3300005616 Bacteria 3142
17 Ga0068859_100118589 3300005617 Bacteria 2712
18 Ga0068860_100060484 3300005843 Bacteria 3599
19 Ga0068860_100210050 3300005843 Bacteria 1888
20 Ga0081539_10000370 3300005985 Bacteria 98520
21 Ga0097620_100118589 3300006931 Bacteria 2712
22 Ga0105240_10023392 3300009093 Bacteria 8171
23 Ga0105243_10111437 3300009148 Bacteria 2290
24 Ga0105241_10003035 3300009174 Bacteria 12527
25 Ga0105241_10012387 3300009174 Bacteria 6250
26 Ga0105238_10004192 3300009551 Bacteria 14310
27 Ga0105238_10017820 3300009551 Bacteria 7220
28 Ga0105238_10020032 3300009551 Bacteria 6810
29 Ga0105239_10014794 3300010375 Bacteria 8654
30 Ga0157372_10130142 3300013307 Bacteria 2895
31 Ga0157375_10111125 3300013308 Bacteria 2839
32 Ga0163163_10015950 3300014325 Bacteria 6961
33 Ga0182008_10000777 3300014497 Bacteria 22348
34 Ga0182006_1015021 3300015261 Bacteria 3326
35 Ga0182007_10000409 3300015262 Bacteria 26386
36 Ga0182007_10000661 3300015262 Bacteria 19773
37 Ga0183367_1011 3300015688 Bacteria 397353
38 Ga0183367_1012 3300015688 Bacteria 347438
39 Ga0224712_10006494 3300022467 Bacteria 3339
40 Ga0209758_1008248 3300025297 Bacteria 6818
41 Ga0207692_10000142 3300025898 Bacteria 22149
42 Ga0207647_10004728 3300025904 Bacteria 10085
43 Ga0207647_10005686 3300025904 Bacteria 9103
44 Ga0207647_10030605 3300025904 Bacteria 3469
45 Ga0207654_10003921 3300025911 Bacteria 7491
46 Ga0207695_10003004 3300025913 Bacteria 24248
47 Ga0207695_10008519 3300025913 Bacteria 12820
48 Ga0207671_10000488 3300025914 Bacteria 53807
49 Ga0207671_10003157 3300025914 Bacteria 16681
50 Ga0207694_10001572 3300025924 Bacteria 19329
51 Ga0207694_10002286 3300025924 Bacteria 15688
52 Ga0207694_10022940 3300025924 Bacteria 4735
53 Ga0207664_10008861 3300025929 Bacteria 7040
54 Ga0207709_10051445 3300025935 Bacteria 2525
55 Ga0207689_10129871 3300025942 Bacteria 2073
56 Ga0207667_10017785 3300025949 Bacteria 7994
57 Ga0207667_10032649 3300025949 Bacteria 5606
58 Ga0207667_10264865 3300025949 Bacteria 1758
59 Ga0207668_10000789 3300025972 Bacteria 19389
60 Ga0207640_10033424 3300025981 Bacteria 3200
61 Ga0207640_10040182 3300025981 Bacteria 2965
62 Ga0207703_10058773 3300026035 Bacteria 3139
63 Ga0207639_10015718 3300026041 Bacteria 5339
64 Ga0268266_10040122 3300028379 Bacteria 3989
65 Ga0268266_10043131 3300028379 Bacteria 3854
66 Ga0268264_10177597 3300028381 Bacteria 1931
67 Ga0307517_10007803 3300028786 Bacteria 15519
68 Ga0307515_10065717 3300028794 Bacteria 5041
69 Ga0307515_10091013 3300028794 Bacteria 3818
70 Ga0307511_10001614 3300030521 Bacteria 23894
71 Ga0307512_10012796 3300030522 Bacteria 7896
72 Ga0307512_10049440 3300030522 Bacteria 3391
73 Ga0316177_1143321 3300030731 Bacteria 3669
74 Ga0316176_1115175 3300030732 Bacteria 4180
75 Ga0314311_1183715 3300030733 Bacteria 3965
76 Ga0307513_10010977 3300031456 Bacteria 11301
77 Ga0307509_10030391 3300031507 Bacteria 5977
78 Ga0307508_10013835 3300031616 Bacteria 7363
79 Ga0307508_10014270 3300031616 Bacteria 7247
80 Ga0307514_10110143 3300031649 Bacteria 1953
81 Ga0307516_10003016 3300031730 Bacteria 21965
82 Ga0307406_10106755 3300031901 Bacteria 1919
83 Ga0307411_10006542 3300032005 Bacteria 5843
84 Ga0307507_10046342 3300033179 Bacteria 4262
85 Ga0373962_0003801 3300035242 Bacteria 3629
86 Ga0395900_0033814 3300037418 Bacteria 5261
87 Ga0395898_0010491 3300037466 Bacteria 9685
88 Ga0395898_0019737 3300037466 Bacteria 6854
89 Ga0395901_0066969 3300038443 Bacteria 3740
90 Ga0439439_0000121 3300041406 Bacteria 10896
91 Ga0451853_3162027 3300041512 Bacteria 4332
92 Ga0439433_0002644 3300041999 Bacteria 3806
93 Ga0439449_0000378 3300042007 Bacteria 16401
94 Ga0439449_0009659 3300042007 Bacteria 3651
95 Ga0439457_000120 3300042014 Bacteria 19130
96 Ga0439457_000307 3300042014 Bacteria 13539
97 Ga0439457_002003 3300042014 Bacteria 5981
98 Ga0450894_000169 3300042131 Bacteria 11571
99 Ga0450894_000494 3300042131 Bacteria 6720
100 Ga0450898_000230 3300042134 Bacteria 6066
101 Ga0450898_000350 3300042134 Bacteria 5270
102 Ga0450899_001437 3300042135 Bacteria 2657
103 Ga0450906_000137 3300042145 Bacteria 13182
104 Ga0450906_001368 3300042145 Bacteria 5324
105 Ga0439458_0004442 3300042157 Bacteria 3217
106 Ga0450908_001998 3300042184 Bacteria 3995
107 Ga0466969_0002201 3300044656 Bacteria 10417
108 Ga0466969_0010818 3300044656 Bacteria 4833
109 Ga0466969_0011846 3300044656 Bacteria 4611
110 Ga0466969_0014006 3300044656 Bacteria 4219
111 Ga0466969_0016191 3300044656 Bacteria 3905
112 Ga0466969_0018098 3300044656 Bacteria 3675
113 Ga0466969_0021422 3300044656 Bacteria 3342
114 Ga0466972_0001073 3300044658 Bacteria 13098
115 Ga0466972_0002839 3300044658 Bacteria 8574
116 Ga0466972_0013389 3300044658 Bacteria 4119
117 Ga0466965_0002325 3300044683 Bacteria 8035
118 Ga0466965_0005681 3300044683 Bacteria 5629
119 Ga0466965_0028399 3300044683 Bacteria 2718
120 Ga0466966_0000483 3300044684 Bacteria 25573
121 Ga0466966_0005049 3300044684 Bacteria 8673
122 Ga0466966_0005518 3300044684 Bacteria 8311
123 Ga0466966_0010884 3300044684 Bacteria 6042
124 Ga0466961_0000878 3300044693 Bacteria 18680
125 Ga0466961_0001141 3300044693 Bacteria 16301
126 Ga0466961_0008091 3300044693 Bacteria 6701
127 Ga0466961_0012242 3300044693 Bacteria 5485
128 Ga0466961_0014951 3300044693 Bacteria 4984
129 Ga0466961_0036665 3300044693 Bacteria 3147
130 Ga0466961_0063308 3300044693 Bacteria 2350
131 Ga0466963_0000622 3300044694 Bacteria 16977
132 Ga0466964_0001568 3300044706 Bacteria 7876
133 Ga0466971_0000682 3300044719 Bacteria 13594
134 Ga0466971_0002364 3300044719 Bacteria 7966
135 Ga0466971_0019317 3300044719 Bacteria 3026
136 Ga0466970_0000889 3300044765 Bacteria 14418
137 Ga0466970_0002040 3300044765 Bacteria 9774
138 Ga0466970_0002982 3300044765 Bacteria 8201
139 Ga0466970_0012096 3300044765 Bacteria 4407
140 Ga0466970_0016038 3300044765 Bacteria 3857
141 Ga0466959_0003191 3300045049 Bacteria 10652
142 Ga0466959_0011601 3300045049 Bacteria 6334
143 Ga0466959_0022606 3300045049 Bacteria 4649
144 Ga0466959_0033825 3300045049 Bacteria 3780
145 Ga0466959_0068320 3300045049 Bacteria 2575
146 Ga0466958_0001342 3300045836 Bacteria 11615
147 Ga0466967_0000066 3300045976 Bacteria 38575
148 Ga0495592_0009352 3300046454 Bacteria 7369
149 Ga0495629_0040585 3300046459 Bacteria 3274
150 Ga0495638_0093030 3300046460 Bacteria 1814
151 Ga0495651_0002959 3300046462 Bacteria 13126
152 Ga0495651_0020676 3300046462 Bacteria 5109
153 Ga0495653_0004711 3300046463 Bacteria 11041
154 Ga0495580_0043519 3300046472 Bacteria 3196
155 Ga0495662_0012761 3300046476 Bacteria 4097
156 Ga0495664_0004495 3300046477 Bacteria 7630
157 Ga0495664_0007205 3300046477 Bacteria 6167
158 Ga0495664_0051393 3300046477 Bacteria 2447
159 Ga0495585_0020757 3300046492 Bacteria 3776
160 Ga0495608_0008779 3300046511 Bacteria 7070
161 Ga0495608_0025648 3300046511 Bacteria 4024
162 Ga0495620_0002502 3300046515 Bacteria 10648
163 Ga0495628_0009398 3300046516 Bacteria 8346
164 Ga0495628_0041917 3300046516 Bacteria 3652
165 Ga0495630_0038501 3300046517 Bacteria 3576
166 Ga0495643_0006314 3300046522 Bacteria 7834
167 Ga0495643_0009173 3300046522 Bacteria 6175
168 Ga0495643_0018430 3300046522 Bacteria 4056
169 Ga0495652_0004196 3300046529 Bacteria 13871
170 Ga0495652_0032170 3300046529 Bacteria 4588
171 Ga0495640_0020896 3300046533 Bacteria 4812
172 Ga0495586_0009402 3300046535 Bacteria 5202
173 Ga0495645_0008347 3300046543 Bacteria 7231
174 Ga0495667_0011964 3300046559 Bacteria 5879
175 Ga0495634_0034958 3300046642 Bacteria 3445
176 Ga0495611_0003748 3300046648 Bacteria 6635
177 Ga0495625_0141692 3300046660 Bacteria 1621
178 Ga0495657_0001859 3300046675 Bacteria 17964
179 Ga0495657_0011828 3300046675 Bacteria 6505
180 Ga0495646_0065636 3300046680 Bacteria 2148
181 Ga0495658_0058895 3300046683 Bacteria 2198
182 Ga0495658_0073787 3300046683 Bacteria 1987
183 Ga0495613_0002228 3300046689 Bacteria 14681
184 Ga0495670_0007842 3300046691 Bacteria 5252
185 Ga0495589_0008022 3300046794 Bacteria 5524
186 Ga0495600_0003110 3300046809 Bacteria 9715
187 Ga0495600_0003411 3300046809 Bacteria 9350
188 Ga0495581_0002746 3300047315 Bacteria 10043
189 Ga0495604_0003407 3300047317 Bacteria 12674
190 Ga0495604_0004232 3300047317 Bacteria 11358
191 Ga0495604_0006063 3300047317 Bacteria 9591
192 Ga0495683_0067947 3300047323 Bacteria 1754
193 Ga0495687_002821 3300047443 Bacteria 13387
194 Ga0495675_0024616 3300047444 Bacteria 3838
195 Ga0495685_000563 3300047447 Bacteria 11465
196 Ga0495685_000931 3300047447 Bacteria 8880
197 Ga0495681_0003555 3300047470 Bacteria 10848
198 Ga0495593_0019749 3300047673 Bacteria 3776
199 Ga0501032_0007240 3300049569 Bacteria 8118
200 Ga0501034_0010239 3300049571 Bacteria 9780
201 Ga0501036_0030024 3300049572 Bacteria 4593
202 Ga0501043_0075348 3300049579 Bacteria 2650
203 Ga0501046_0036227 3300049580 Bacteria 3972
204 Ga0501047_0011190 3300049581 Bacteria 8490
205 Ga0501047_0030799 3300049581 Bacteria 5171
206 Ga0501047_0078184 3300049581 Bacteria 3182
207 Ga0501047_0122117 3300049581 Bacteria 2486
208 Ga0501035_0014673 3300049822 Bacteria 7233
209 Ga0501044_0078910 3300049823 Bacteria 3336
210 Ga0500566_0010142 3300053094 Bacteria 5556
211 Ga0500569_001250 3300053109 Bacteria 4741
212 Ga0500614_003157 3300053123 Bacteria 3575
213 Ga0500614_011392 3300053123 Bacteria 1924
214 Ga0500652_004739 3300053131 Bacteria 4230
215 Ga0500658_0004033 3300053134 Bacteria 5517
216 Ga0500573_0058502 3300053140 Bacteria 2210
217 Ga0500600_0006627 3300053149 Bacteria 6923
218 Ga0500616_0004587 3300053153 Bacteria 9771
219 Ga0500616_0005770 3300053153 Bacteria 8315
220 Ga0500633_0001288 3300053160 Bacteria 4641
221 Ga0500634_0004848 3300053161 Bacteria 6298
222 Ga0500634_0026104 3300053161 Bacteria 3181
223 Ga0500587_001690 3300053739 Bacteria 3136
224 Ga0466962_0002288 3300061719 Bacteria 9079
225 Ga0466962_0015103 3300061719 Bacteria 3723
226 Ga0466962_0019150 3300061719 Bacteria 3287
227 2995467583 2995463766 Bacteria 8577691
228 2559427462 2558860280 Bacteria 11429938
229 2585309506 2582581313 Bacteria 10042643
230 2585313977 2582581314 Bacteria 11452267
231 2644179078 2643221631 Bacteria 8168043
232 2644443344 2643221678 Bacteria 9540101
233 2644627350 2643221714 Bacteria 9015452
234 2644631098 2643221714 Bacteria 9015452
235 2676489054 2675903060 Bacteria 10051191
236 2753076386 2751185734 Bacteria 8863695
237 2753270113 2751185782 Bacteria 11227053
238 2753271954 2751185782 Bacteria 11227053
239 2785339110 2784746763 Bacteria 9783172
240 2785346313 2784746763 Bacteria 9783172
241 2785346822 2784746763 Bacteria 9783172
242 2785365927 2784746768 Bacteria 10036182
243 2785373455 2784746768 Bacteria 10036182
244 2786666848 2786546132 Bacteria 10419719
245 2808848706 2808606359 Bacteria 9866990
246 2808916475 2808606375 Bacteria 9466072
247 2819747706 2818991472 Bacteria 10089953
248 2852642599 2852635781 Bacteria 8251373
249 2856745044 2856741275 Bacteria 8096094
250 2862184331 2862178590 Bacteria 8583590
251 2862386819 2862382967 Bacteria 10317375
252 2862389659 2862382967 Bacteria 10317375
253 2863407843 2863404153 Bacteria 9672205
254 2863411083 2863404153 Bacteria 9672205
255 2867433343 2867428634 Bacteria 9590268
256 2870723118 2870721527 Bacteria 9689237
257 2877683656 2877676314 Bacteria 9512378
258 2884699762 2884693830 Bacteria 11273186
259 2884702666 2884693830 Bacteria 11273186
260 2891402148 2891395885 Bacteria 9251614
261 2891560266 2891554331 Bacteria 8812224
262 2891563419 2891562705 Bacteria 8039471
263 2895429475 2895427314 Bacteria 13147766
264 2895443036 2895442618 Bacteria 11027144
265 2895452166 2895442618 Bacteria 11027144
266 2912759050 2912757875 Bacteria 7940295
267 2919474044 2919468124 Bacteria 9133025
268 2946079865 2946072368 Bacteria 8999607
269 2946080426 2946072368 Bacteria 8999607
270 2947224253 2947224130 Bacteria 9938529
271 2954009368 2954002825 Bacteria 9173742
272 2954390060 2954380949 Bacteria 10050426
273 2954681933 2954673503 Bacteria 9685905
274 2954690991 2954682443 Bacteria 9862841
275 2954712276 2954711539 Bacteria 10867210
276 2954722221 2954721474 Bacteria 10456478
277 2954739628 2954731030 Bacteria 10243860
278 2954741110 2954740390 Bacteria 10229294
279 2954758454 2954749733 Bacteria 10366972
280 2954760121 2954759201 Bacteria 9358192
281 2990066963 2990059506 Bacteria 9321252
282 2997454153 2997451912 Bacteria 8492419
283 3006323570 3006321560 Bacteria 8247479
284 3006428403 3006425503 Bacteria 6491253
285 8008558983 8008558824 Bacteria 10610750
286 8008560425 8008558824 Bacteria 10610750
287 8025530911 8025530807 Bacteria 8495698
288 8047712307 8047710418 Bacteria 11023148
289 8055069287 8055066027 Bacteria 9479577
290 8055172984 8055172936 Bacteria 9305943
291 JGI24737J22298_10028051
292 JGI24738J21930_10006882
293 rootH1_10012277
294 Ga0070668_100000180
295 Ga0070668_100002726
296 Ga0070714_100004149
297 Ga0070710_10000034
298 Ga0070684_100048688
299 Ga0068853_100068628
300 Ga0068853_100088212
301 Ga0070665_100080700
302 Ga0068855_100008688
303 Ga0068855_100009579
304 Ga0068854_100022768
305 Ga0068856_100041591
306 Ga0068852_100066761
307 Ga0068859_100118589
308 Ga0068860_100060484
309 Ga0068860_100210050
310 Ga0081539_10000370
311 Ga0097620_100118589
312 Ga0105240_10023392
313 Ga0105243_10111437
314 Ga0105241_10003035
315 Ga0105241_10012387
316 Ga0105238_10004192
317 Ga0105238_10017820
318 Ga0105238_10020032
319 Ga0105239_10014794
320 Ga0157372_10130142
321 Ga0157375_10111125
322 Ga0163163_10015950
323 Ga0182008_10000777
324 Ga0182006_1015021
325 Ga0182007_10000409
326 Ga0182007_10000661
327 Ga0183367_1011
328 Ga0183367_1012
329 Ga0224712_10006494
330 Ga0209758_1008248
331 Ga0207692_10000142
332 Ga0207647_10004728
333 Ga0207647_10005686
334 Ga0207647_10030605
335 Ga0207654_10003921
336 Ga0207695_10003004
337 Ga0207695_10008519
338 Ga0207671_10000488
339 Ga0207671_10003157
340 Ga0207694_10001572
341 Ga0207694_10002286
342 Ga0207694_10022940
343 Ga0207664_10008861
344 Ga0207709_10051445
345 Ga0207689_10129871
346 Ga0207667_10017785
347 Ga0207667_10032649
348 Ga0207667_10264865
349 Ga0207668_10000789
350 Ga0207640_10033424
351 Ga0207640_10040182
352 Ga0207703_10058773
353 Ga0207639_10015718
354 Ga0268266_10040122
355 Ga0268266_10043131
356 Ga0268264_10177597
357 Ga0307517_10007803
358 Ga0307515_10065717
359 Ga0307515_10091013
360 Ga0307511_10001614
361 Ga0307512_10012796
362 Ga0307512_10049440
363 Ga0316177_1143321
364 Ga0316176_1115175
365 Ga0314311_1183715
366 Ga0307513_10010977
367 Ga0307509_10030391
368 Ga0307508_10013835
369 Ga0307508_10014270
370 Ga0307514_10110143
371 Ga0307516_10003016
372 Ga0307406_10106755
373 Ga0307411_10006542
374 Ga0307507_10046342
375 Ga0373962_0003801
376 Ga0395900_0033814
377 Ga0395898_0010491
378 Ga0395898_0019737
379 Ga0395901_0066969
380 Ga0439439_0000121
381 Ga0451853_3162027
382 Ga0439433_0002644
383 Ga0439449_0000378
384 Ga0439449_0009659
385 Ga0439457_000120
386 Ga0439457_000307
387 Ga0439457_002003
388 Ga0450894_000169
389 Ga0450894_000494
390 Ga0450898_000230
391 Ga0450898_000350
392 Ga0450899_001437
393 Ga0450906_000137
394 Ga0450906_001368
395 Ga0439458_0004442
396 Ga0450908_001998
397 Ga0466969_0002201
398 Ga0466969_0010818
399 Ga0466969_0011846
400 Ga0466969_0014006
401 Ga0466969_0016191
402 Ga0466969_0018098
403 Ga0466969_0021422
404 Ga0466972_0001073
405 Ga0466972_0002839
406 Ga0466972_0013389
407 Ga0466965_0002325
408 Ga0466965_0005681
409 Ga0466965_0028399
410 Ga0466966_0000483
411 Ga0466966_0005049
412 Ga0466966_0005518
413 Ga0466966_0010884
414 Ga0466961_0000878
415 Ga0466961_0001141
416 Ga0466961_0008091
417 Ga0466961_0012242
418 Ga0466961_0014951
419 Ga0466961_0036665
420 Ga0466961_0063308
421 Ga0466963_0000622
422 Ga0466964_0001568
423 Ga0466971_0000682
424 Ga0466971_0002364
425 Ga0466971_0019317
426 Ga0466970_0000889
427 Ga0466970_0002040
428 Ga0466970_0002982
429 Ga0466970_0012096
430 Ga0466970_0016038
431 Ga0466959_0003191
432 Ga0466959_0011601
433 Ga0466959_0022606
434 Ga0466959_0033825
435 Ga0466959_0068320
436 Ga0466958_0001342
437 Ga0466967_0000066
438 Ga0495592_0009352
439 Ga0495629_0040585
440 Ga0495638_0093030
441 Ga0495651_0002959
442 Ga0495651_0020676
443 Ga0495653_0004711
444 Ga0495580_0043519
445 Ga0495662_0012761
446 Ga0495664_0004495
447 Ga0495664_0007205
448 Ga0495664_0051393
449 Ga0495585_0020757
450 Ga0495608_0008779
451 Ga0495608_0025648
452 Ga0495620_0002502
453 Ga0495628_0009398
454 Ga0495628_0041917
455 Ga0495630_0038501
456 Ga0495643_0006314
457 Ga0495643_0009173
458 Ga0495643_0018430
459 Ga0495652_0004196
460 Ga0495652_0032170
461 Ga0495640_0020896
462 Ga0495586_0009402
463 Ga0495645_0008347
464 Ga0495667_0011964
465 Ga0495634_0034958
466 Ga0495611_0003748
467 Ga0495625_0141692
468 Ga0495657_0001859
469 Ga0495657_0011828
470 Ga0495646_0065636
471 Ga0495658_0058895
472 Ga0495658_0073787
473 Ga0495613_0002228
474 Ga0495670_0007842
475 Ga0495589_0008022
476 Ga0495600_0003110
477 Ga0495600_0003411
478 Ga0495581_0002746
479 Ga0495604_0003407
480 Ga0495604_0004232
481 Ga0495604_0006063
482 Ga0495683_0067947
483 Ga0495687_002821
484 Ga0495675_0024616
485 Ga0495685_000563
486 Ga0495685_000931
487 Ga0495681_0003555
488 Ga0495593_0019749
489 Ga0501032_0007240
490 Ga0501034_0010239
491 Ga0501036_0030024
492 Ga0501043_0075348
493 Ga0501046_0036227
494 Ga0501047_0011190
495 Ga0501047_0030799
496 Ga0501047_0078184
497 Ga0501047_0122117
498 Ga0501035_0014673
499 Ga0501044_0078910
500 Ga0500566_0010142
501 Ga0500569_001250
502 Ga0500614_003157
503 Ga0500614_011392
504 Ga0500652_004739
505 Ga0500658_0004033
506 Ga0500573_0058502
507 Ga0500600_0006627
508 Ga0500616_0004587
509 Ga0500616_0005770
510 Ga0500633_0001288
511 Ga0500634_0004848
512 Ga0500634_0026104
513 Ga0500587_001690
514 Ga0466962_0002288
515 Ga0466962_0015103
516 Ga0466962_0019150
517 2995467583
518 2559427462
519 2585309506
520 2585313977
521 2644179078
522 2644443344
523 2644627350
524 2644631098
525 2676489054
526 2753076386
527 2753270113
528 2753271954
529 2785339110
530 2785346313
531 2785346822
532 2785365927
533 2785373455
534 2786666848
535 2808848706
536 2808916475
537 2819747706
538 2852642599
539 2856745044
540 2862184331
541 2862386819
542 2862389659
543 2863407843
544 2863411083
545 2867433343
546 2870723118
547 2877683656
548 2884699762
549 2884702666
550 2891402148
551 2891560266
552 2891563419
553 2895429475
554 2895443036
555 2895452166
556 2912759050
557 2919474044
558 2946079865
559 2946080426
560 2947224253
561 2954009368
562 2954390060
563 2954681933
564 2954690991
565 2954712276
566 2954722221
567 2954739628
568 2954741110
569 2954758454
570 2954760121
571 2990066963
572 2997454153
573 3006323570
574 3006428403
575 8008558983
576 8008560425
577 8025530911
578 8047712307
579 8055069287
580 8055172984

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

29

179

0.95

PF00005

ABC_tran

ABC transporter

289

444

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8717 17 241
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8644 17 241
2nq2-assembly1.cif.gz_D an inward-facing conformation of a putative metal-chelate type abc transporter. 0.8576 17 251
2it1-assembly1.cif.gz_B structure of ph0203 protein from pyrococcus horikoshii 0.8574 19 245
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.8538 16 239
ID Description Score Start End Superfamily
af_P77509_259_498_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.921 274 469 3.40.50.300
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9183 10 253 3.40.50.300
af_P37388_247_513_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9142 273 466 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9139 276 466 3.40.50.300
af_P0AAG8_265_500_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9132 276 467 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X6Q8U8-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9443 318 454 GO:0005524
GO:0016887
AF-A0A435UPJ4-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9436 323 456 GO:0005524
GO:0016887
AF-A0A7W1CF19-F1-model_v4 Heme ABC transporter ATP-binding protein 0.9428 322 460 GO:0005524
AF-A0A133U3K5-F1-model_v4 ABC transporter domain-containing protein 0.9326 321 456 GO:0005524
GO:0016887
AF-A0A351KD13-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9264 318 457 GO:0005524
GO:0005886
GO:0016887
GO:0043211

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