F389936

General Info

Members Datasets Scaffolds Average Seq Length
290 206 580 404

Family's Representative Sequence

Representative Sequence 3300046459|Ga0495629_0041218|Ga0495629_0041218_1076_2368
Length 430
Sequence MKRVERIDHMARTNPKARHQPMPPFDVPEGDPFGPHNLPYGVFSLADPAGDPERRVGVRLGDHVLDAGAAARALGSPYAGLLAQPTLDPLLAAGRTAWSDVRRALTAWVTVPAHRETLAPHFHPLSDVTLHLPFTVADYVDFYASENHARNVGQIFRPDAADSLTPNWKHLPIGYHGRAGTVVVSGTDVVRPSGQRKAPADDAPVFGPSIRLDIEAEVGFVVGTPSEQGRPVRLGDYRDHVFGLCLLNDWSARDIQAWEYVPLGPFLGKSFATSVSAWITPLDALDEARVASPARTHPLLPYLDDASEDPGGYDLRISVAINGHVVSEPPFSTMYWTAAQQLAHMTVNGASLRTGDLYGSGTVSGPSEGERGSLLELTWNGRDALELPDGKRTFLEDGDEVTLTAWAPGPGGTRVGLGEVRGRITQAVPH

Samples

Sample ID Description Type Environment
1 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
17 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
18 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
21 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
24 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
25 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
35 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
36 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
41 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
42 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
43 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
48 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
49 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
50 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
51 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
52 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
53 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
54 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
55 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
56 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
73 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
83 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
84 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
85 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
116 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
156 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
160 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
161 2643221711 Terrabacter sp. Root85 Isolate Unclassified
162 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
163 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
164 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
165 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
166 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
167 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
168 2808606448 Streptomyces sp. 193411 Isolate Unclassified
169 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
170 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
171 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
172 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
173 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
174 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
175 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
176 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
177 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
178 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
179 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
180 2862574272 Streptomyces sp. AcE210 Isolate Nodule
181 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
182 2867428634 Streptomyces sp. RP5T Isolate Unclassified
183 2867475112 Streptomyces sp. TM32 Isolate Unclassified
184 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
185 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
186 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
187 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
188 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
189 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
190 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
191 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
192 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
193 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
194 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
195 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
196 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
197 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
198 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
199 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
200 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
201 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
202 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
203 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
204 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
205 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
206 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.07
Metatranscriptomes 1.38
Isolates 16.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.38
Nodule 0.34
Rhizoplane 5.52
Rhizosphere 75.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495629_0041218 3300046459 Bacteria 3249
2 Ga0006562J51391_1075142 3300003578 Bacteria 4160
3 Ga0006562J51391_1075144 3300003578 Bacteria 2850
4 Ga0006562J51391_1091586 3300003578 Bacteria 2710
5 Ga0070658_10000338 3300005327 Bacteria 40418
6 Ga0070680_100093506 3300005336 Bacteria 2491
7 Ga0070705_100005761 3300005440 Bacteria 6053
8 Ga0070679_100260328 3300005530 Bacteria 1690
9 Ga0068853_100176173 3300005539 Bacteria 1937
10 Ga0068854_100157098 3300005578 Bacteria 1758
11 Ga0070702_100000890 3300005615 Bacteria 11627
12 Ga0081455_10003623 3300005937 Bacteria 17700
13 Ga0081540_1003757 3300005983 Bacteria 11902
14 Ga0114129_10011368 3300009147 Bacteria 12680
15 Ga0105243_10061180 3300009148 Bacteria 3010
16 Ga0105242_10011836 3300009176 Bacteria 6714
17 Ga0105238_10396338 3300009551 Bacteria 1373
18 Ga0105249_10058107 3300009553 Bacteria 3545
19 Ga0157378_10033975 3300013297 Bacteria 4511
20 Ga0163162_10100773 3300013306 Bacteria 2980
21 Ga0157375_10401428 3300013308 Bacteria 1537
22 Ga0183367_1002 3300015688 Bacteria 1101531
23 Ga0206353_10363802 3300020082 Bacteria 2322
24 Ga0213875_10026987 3300021388 Bacteria 2732
25 Ga0209758_1002824 3300025297 Bacteria 16900
26 Ga0207426_1003792 3300025302 Bacteria 7845
27 Ga0207642_10010694 3300025899 Bacteria 3246
28 Ga0207660_10064538 3300025917 Bacteria 2643
29 Ga0207712_10119929 3300025961 Bacteria 1988
30 Ga0207639_10194262 3300026041 Bacteria 1736
31 Ga0307517_10005623 3300028786 Bacteria 18815
32 Ga0307515_10001177 3300028794 Bacteria 59836
33 Ga0307515_10092152 3300028794 Bacteria 3775
34 Ga0265338_10055320 3300028800 Bacteria 3530
35 Ga0265338_10142091 3300028800 Bacteria 1879
36 Ga0307511_10001462 3300030521 Bacteria 24966
37 Ga0307511_10034460 3300030521 Bacteria 4441
38 Ga0307512_10001507 3300030522 Bacteria 32791
39 Ga0307512_10033349 3300030522 Bacteria 4428
40 Ga0265340_10002581 3300031247 Bacteria 10284
41 Ga0265340_10002853 3300031247 Bacteria 9837
42 Ga0307513_10011568 3300031456 Bacteria 10959
43 Ga0307509_10035214 3300031507 Bacteria 5497
44 Ga0307509_10088542 3300031507 Bacteria 3177
45 Ga0307508_10001538 3300031616 Bacteria 25800
46 Ga0307508_10014930 3300031616 Bacteria 7083
47 Ga0307514_10013129 3300031649 Bacteria 6872
48 Ga0265342_10112725 3300031712 Bacteria 1538
49 Ga0307516_10054758 3300031730 Bacteria 3897
50 Ga0307516_10067293 3300031730 Bacteria 3452
51 Ga0307518_10206666 3300031838 Bacteria 1297
52 Ga0307507_10009696 3300033179 Bacteria 12719
53 Ga0307507_10043008 3300033179 Bacteria 4490
54 Ga0307507_10120043 3300033179 Bacteria 2107
55 Ga0307510_10017067 3300033180 Bacteria 8564
56 Ga0307510_10051588 3300033180 Bacteria 4348
57 Ga0395898_0006282 3300037466 Bacteria 12702
58 Ga0395898_0018729 3300037466 Bacteria 7057
59 Ga0436364_1221885 3300037853 Bacteria 2709
60 Ga0395901_0115086 3300038443 Bacteria 2825
61 Ga0439436_0005865 3300041404 Bacteria 3764
62 Ga0439439_0001860 3300041406 Bacteria 4346
63 Ga0439439_0003755 3300041406 Bacteria 3370
64 Ga0439433_0000165 3300041999 Bacteria 10307
65 Ga0439433_0004789 3300041999 Bacteria 2908
66 Ga0439449_0014484 3300042007 Bacteria 2964
67 Ga0439449_0025931 3300042007 Bacteria 2189
68 Ga0439457_000561 3300042014 Bacteria 10837
69 Ga0439457_002321 3300042014 Bacteria 5470
70 Ga0439462_0003505 3300042015 Bacteria 3767
71 Ga0439462_0029786 3300042015 Bacteria 1444
72 Ga0450903_000454 3300042138 Bacteria 8677
73 Ga0439458_0000565 3300042157 Bacteria 9528
74 Ga0466972_0007271 3300044658 Bacteria 5559
75 Ga0466965_0006738 3300044683 Bacteria 5241
76 Ga0466966_0008800 3300044684 Bacteria 6683
77 Ga0466966_0014241 3300044684 Bacteria 5266
78 Ga0466966_0016892 3300044684 Bacteria 4822
79 Ga0466961_0002797 3300044693 Bacteria 10853
80 Ga0466961_0015152 3300044693 Bacteria 4950
81 Ga0466963_0005145 3300044694 Bacteria 7635
82 Ga0466964_0021525 3300044706 Bacteria 2495
83 Ga0466971_0038778 3300044719 Bacteria 2138
84 Ga0466970_0000292 3300044765 Bacteria 24512
85 Ga0466970_0011356 3300044765 Bacteria 4540
86 Ga0466957_0001576 3300044842 Bacteria 11997
87 Ga0466960_0001856 3300044901 Bacteria 7758
88 Ga0466959_0042031 3300045049 Bacteria 3372
89 Ga0466959_0131041 3300045049 Bacteria 1777
90 Ga0466958_0002907 3300045836 Bacteria 8749
91 Ga0466967_0005390 3300045976 Bacteria 8856
92 Ga0466967_0029020 3300045976 Bacteria 4625
93 Ga0466967_0046578 3300045976 Bacteria 3776
94 Ga0466967_0166933 3300045976 Bacteria 2069
95 Ga0466967_0228389 3300045976 Bacteria 1771
96 Ga0466967_0536589 3300045976 Bacteria 1150
97 Ga0495592_0061008 3300046454 Bacteria 2772
98 Ga0495590_0038113 3300046457 Bacteria 1675
99 Ga0495629_0006964 3300046459 Bacteria 8342
100 Ga0495629_0028355 3300046459 Bacteria 3975
101 Ga0495629_0045742 3300046459 Bacteria 3070
102 Ga0495638_0048255 3300046460 Bacteria 2666
103 Ga0495651_0002505 3300046462 Bacteria 14206
104 Ga0495651_0111120 3300046462 Bacteria 2026
105 Ga0495653_0115880 3300046463 Bacteria 1917
106 Ga0495582_0068376 3300046473 Bacteria 1963
107 Ga0495662_0006467 3300046476 Bacteria 5851
108 Ga0495662_0010499 3300046476 Bacteria 4532
109 Ga0495664_0004359 3300046477 Bacteria 7736
110 Ga0495585_0025331 3300046492 Bacteria 3399
111 Ga0495594_0006878 3300046499 Bacteria 5849
112 Ga0495594_0048077 3300046499 Bacteria 2343
113 Ga0495606_0002492 3300046507 Bacteria 21287
114 Ga0495608_0082434 3300046511 Bacteria 2089
115 Ga0495616_0004454 3300046513 Bacteria 8823
116 Ga0495618_0046825 3300046514 Bacteria 2729
117 Ga0495620_0003038 3300046515 Bacteria 9650
118 Ga0495628_0010112 3300046516 Bacteria 8023
119 Ga0495628_0131200 3300046516 Bacteria 1916
120 Ga0495631_0002505 3300046518 Bacteria 10337
121 Ga0495637_0021010 3300046520 Bacteria 2995
122 Ga0495643_0002231 3300046522 Bacteria 15747
123 Ga0495652_0028118 3300046529 Bacteria 4952
124 Ga0495652_0059248 3300046529 Bacteria 3240
125 Ga0495654_0041588 3300046530 Bacteria 2285
126 Ga0495586_0040133 3300046535 Bacteria 2517
127 Ga0495587_0009797 3300046536 Bacteria 6121
128 Ga0495645_0008585 3300046543 Bacteria 7136
129 Ga0495622_0012130 3300046557 Bacteria 3987
130 Ga0495633_0011969 3300046558 Bacteria 4637
131 Ga0495667_0037571 3300046559 Bacteria 3227
132 Ga0495656_0052730 3300046615 Bacteria 1745
133 Ga0495634_0004563 3300046642 Bacteria 10814
134 Ga0495634_0006797 3300046642 Bacteria 8661
135 Ga0495635_0012921 3300046663 Bacteria 5846
136 Ga0495661_0011932 3300046665 Bacteria 5881
137 Ga0495588_0034165 3300046674 Bacteria 2572
138 Ga0495657_0004839 3300046675 Bacteria 10733
139 Ga0495657_0033828 3300046675 Bacteria 3554
140 Ga0495657_0089364 3300046675 Bacteria 1979
141 Ga0495599_0078687 3300046678 Bacteria 2059
142 Ga0495646_0026827 3300046680 Bacteria 3615
143 Ga0495613_0001664 3300046689 Bacteria 16910
144 Ga0495613_0004397 3300046689 Bacteria 10548
145 Ga0495613_0015613 3300046689 Bacteria 5651
146 Ga0495613_0027842 3300046689 Bacteria 4206
147 Ga0495671_0006570 3300046692 Bacteria 6705
148 Ga0495589_0004470 3300046794 Bacteria 7438
149 Ga0495600_0012967 3300046809 Bacteria 5224
150 Ga0495581_0004000 3300047315 Bacteria 8488
151 Ga0495581_0075599 3300047315 Bacteria 1949
152 Ga0495581_0158711 3300047315 Bacteria 1322
153 Ga0495604_0002351 3300047317 Bacteria 15156
154 Ga0495636_0005270 3300047318 Bacteria 5075
155 Ga0495672_0044386 3300047320 Bacteria 2667
156 Ga0495676_0001590 3300047321 Bacteria 19706
157 Ga0495676_0060596 3300047321 Bacteria 2964
158 Ga0495680_0129171 3300047322 Bacteria 1858
159 Ga0495680_0167160 3300047322 Bacteria 1594
160 Ga0495687_004081 3300047443 Bacteria 10106
161 Ga0495675_0034092 3300047444 Bacteria 3249
162 Ga0495677_0073051 3300047445 Bacteria 1279
163 Ga0495685_005405 3300047447 Bacteria 4169
164 Ga0495681_0000493 3300047470 Bacteria 30292
165 Ga0495681_0033668 3300047470 Bacteria 2562
166 Ga0495686_0064526 3300047472 Bacteria 2266
167 Ga0495593_0003153 3300047673 Bacteria 9899
168 Ga0495593_0003506 3300047673 Bacteria 9383
169 Ga0495614_0002270 3300048089 Bacteria 8537
170 Ga0496100_0058403 3300048903 Bacteria 2531
171 Ga0496101_0008356 3300048904 Bacteria 6764
172 Ga0496104_0002769 3300048907 Bacteria 15099
173 Ga0496104_0043542 3300048907 Bacteria 4216
174 Ga0496104_0069717 3300048907 Bacteria 3342
175 Ga0496105_0009392 3300048908 Bacteria 7648
176 Ga0496105_0070502 3300048908 Bacteria 2889
177 Ga0496105_0194822 3300048908 Bacteria 1656
178 Ga0496107_0039773 3300048910 Bacteria 3374
179 Ga0496109_0217106 3300048912 Bacteria 1798
180 Ga0496109_0314168 3300048912 Bacteria 1478
181 Ga0496112_0095824 3300048915 Bacteria 2938
182 Ga0496112_0110658 3300048915 Bacteria 2717
183 Ga0496113_0095156 3300048916 Bacteria 2302
184 Ga0496114_0007842 3300048917 Bacteria 8447
185 Ga0496114_0030297 3300048917 Bacteria 4451
186 Ga0496126_0239969 3300048929 Bacteria 1515
187 Ga0501031_0005737 3300049568 Bacteria 8091
188 Ga0501031_0027541 3300049568 Bacteria 3705
189 Ga0501032_0005470 3300049569 Bacteria 9423
190 Ga0501033_0004249 3300049570 Bacteria 11520
191 Ga0501033_0138910 3300049570 Bacteria 1757
192 Ga0501034_0015479 3300049571 Bacteria 7837
193 Ga0501034_0025496 3300049571 Bacteria 6020
194 Ga0501034_0088539 3300049571 Bacteria 3094
195 Ga0501034_0283376 3300049571 Bacteria 1596
196 Ga0501036_0000337 3300049572 Bacteria 32891
197 Ga0501036_0014002 3300049572 Bacteria 6666
198 Ga0501036_0035654 3300049572 Bacteria 4208
199 Ga0501036_0051654 3300049572 Bacteria 3481
200 Ga0501036_0110811 3300049572 Bacteria 2319
201 Ga0501037_0004882 3300049573 Bacteria 9755
202 Ga0501037_0095740 3300049573 Bacteria 2146
203 Ga0501037_0099064 3300049573 Bacteria 2105
204 Ga0501038_0001678 3300049574 Bacteria 20514
205 Ga0501038_0020488 3300049574 Bacteria 5942
206 Ga0501038_0031351 3300049574 Bacteria 4698
207 Ga0501039_0003165 3300049575 Bacteria 12309
208 Ga0501042_0014076 3300049578 Bacteria 5454
209 Ga0501043_0003642 3300049579 Bacteria 12647
210 Ga0501043_0004286 3300049579 Bacteria 11613
211 Ga0501043_0011676 3300049579 Bacteria 6875
212 Ga0501046_0010001 3300049580 Bacteria 8170
213 Ga0501047_0001541 3300049581 Bacteria 22544
214 Ga0501047_0013526 3300049581 Bacteria 7737
215 Ga0501047_0016244 3300049581 Bacteria 7100
216 Ga0501048_0003811 3300049582 Bacteria 11500
217 Ga0501048_0054760 3300049582 Bacteria 2833
218 Ga0501048_0165877 3300049582 Bacteria 1564
219 Ga0501070_0001714 3300049586 Bacteria 19423
220 Ga0501070_0005824 3300049586 Bacteria 10516
221 Ga0501071_0026393 3300049587 Bacteria 4077
222 Ga0501072_0008310 3300049588 Bacteria 7884
223 Ga0501079_0059060 3300049741 Bacteria 2959
224 Ga0501080_0167566 3300049742 Bacteria 2027
225 Ga0501081_0052755 3300049743 Bacteria 2807
226 Ga0501035_0007011 3300049822 Bacteria 10529
227 Ga0501035_0011071 3300049822 Bacteria 8353
228 Ga0501035_0032852 3300049822 Bacteria 4719
229 Ga0501035_0045380 3300049822 Bacteria 3954
230 Ga0501035_0243482 3300049822 Bacteria 1529
231 Ga0501044_0007089 3300049823 Bacteria 12337
232 Ga0501044_0031981 3300049823 Bacteria 5532
233 Ga0501044_0040622 3300049823 Bacteria 4847
234 Ga0501044_0109074 3300049823 Bacteria 2777
235 Ga0501044_0348322 3300049823 Bacteria 1401
236 Ga0501045_0008949 3300049824 Bacteria 6992
237 nmdc:mga09592_37632_c1 3300050508 Bacteria 4059
238 Ga0495619_0030300 3300053085 Bacteria 3502
239 Ga0500640_002778 3300053095 Bacteria 5896
240 Ga0500572_003126 3300053111 Bacteria 3836
241 Ga0501084_0043659 3300054114 Bacteria 3750
242 Ga0530510_0017362 3300061734 Bacteria 5100
243 2585319503 2582581314 Bacteria 11452267
244 2616696880 2616644814 Bacteria 11555299
245 2644611369 2643221711 Bacteria 4865335
246 2784589643 2784132148 Bacteria 8627943
247 2785341969 2784746763 Bacteria 9783172
248 2785370686 2784746768 Bacteria 10036182
249 2786671869 2786546132 Bacteria 10419719
250 2808843236 2808606359 Bacteria 9866990
251 2808912825 2808606375 Bacteria 9466072
252 2809233316 2808606448 Bacteria 8656184
253 2812356807 2811994879 Bacteria 9313447
254 2812375544 2811994882 Bacteria 4688362
255 2812479528 2811994917 Bacteria 7761064
256 2819424263 2818991318 Bacteria 5266538
257 2819668227 2818991458 Bacteria 4794049
258 2819692065 2818991462 Bacteria 4320267
259 2819729820 2818991469 Bacteria 4644110
260 2852640426 2852635781 Bacteria 8251373
261 2862286766 2862281513 Bacteria 9621493
262 2862292190 2862290372 Bacteria 7471434
263 2862514381 2862507626 Bacteria 9425308
264 2862578270 2862574272 Bacteria 10567477
265 2862706071 2862705112 Bacteria 6563286
266 2867428854 2867428634 Bacteria 9590268
267 2867479138 2867475112 Bacteria 6909112
268 2877679902 2877676314 Bacteria 9512378
269 2912718555 2912715099 Bacteria 9460473
270 2912730868 2912723979 Bacteria 8557534
271 2935394874 2935390628 Bacteria 7043367
272 2946069065 2946064051 Bacteria 8957905
273 2947227872 2947224130 Bacteria 9938529
274 2954003038 2954002825 Bacteria 9173742
275 2954384858 2954380949 Bacteria 10050426
276 2954678141 2954673503 Bacteria 9685905
277 2954695671 2954691527 Bacteria 10720516
278 2954710864 2954701450 Bacteria 10834262
279 2990045367 2990044586 Bacteria 6603797
280 2990088732 2990088156 Bacteria 6657676
281 3006427237 3006425503 Bacteria 6491253
282 3006492637 3006486233 Bacteria 8157040
283 3006499670 3006493962 Bacteria 8825450
284 8008490401 8008485437 Bacteria 7198341
285 8008577882 8008574985 Bacteria 7815457
286 8023626431 8023623736 Bacteria 8593882
287 8025529703 8025524527 Bacteria 7197316
288 8033689147 8033684223 Bacteria 6906479
289 8056448881 8056447290 Bacteria 7680491
290 8056833884 8056829672 Bacteria 9045328
291 Ga0495629_0041218
292 Ga0006562J51391_1075142
293 Ga0006562J51391_1075144
294 Ga0006562J51391_1091586
295 Ga0070658_10000338
296 Ga0070680_100093506
297 Ga0070705_100005761
298 Ga0070679_100260328
299 Ga0068853_100176173
300 Ga0068854_100157098
301 Ga0070702_100000890
302 Ga0081455_10003623
303 Ga0081540_1003757
304 Ga0114129_10011368
305 Ga0105243_10061180
306 Ga0105242_10011836
307 Ga0105238_10396338
308 Ga0105249_10058107
309 Ga0157378_10033975
310 Ga0163162_10100773
311 Ga0157375_10401428
312 Ga0183367_1002
313 Ga0206353_10363802
314 Ga0213875_10026987
315 Ga0209758_1002824
316 Ga0207426_1003792
317 Ga0207642_10010694
318 Ga0207660_10064538
319 Ga0207712_10119929
320 Ga0207639_10194262
321 Ga0307517_10005623
322 Ga0307515_10001177
323 Ga0307515_10092152
324 Ga0265338_10055320
325 Ga0265338_10142091
326 Ga0307511_10001462
327 Ga0307511_10034460
328 Ga0307512_10001507
329 Ga0307512_10033349
330 Ga0265340_10002581
331 Ga0265340_10002853
332 Ga0307513_10011568
333 Ga0307509_10035214
334 Ga0307509_10088542
335 Ga0307508_10001538
336 Ga0307508_10014930
337 Ga0307514_10013129
338 Ga0265342_10112725
339 Ga0307516_10054758
340 Ga0307516_10067293
341 Ga0307518_10206666
342 Ga0307507_10009696
343 Ga0307507_10043008
344 Ga0307507_10120043
345 Ga0307510_10017067
346 Ga0307510_10051588
347 Ga0395898_0006282
348 Ga0395898_0018729
349 Ga0436364_1221885
350 Ga0395901_0115086
351 Ga0439436_0005865
352 Ga0439439_0001860
353 Ga0439439_0003755
354 Ga0439433_0000165
355 Ga0439433_0004789
356 Ga0439449_0014484
357 Ga0439449_0025931
358 Ga0439457_000561
359 Ga0439457_002321
360 Ga0439462_0003505
361 Ga0439462_0029786
362 Ga0450903_000454
363 Ga0439458_0000565
364 Ga0466972_0007271
365 Ga0466965_0006738
366 Ga0466966_0008800
367 Ga0466966_0014241
368 Ga0466966_0016892
369 Ga0466961_0002797
370 Ga0466961_0015152
371 Ga0466963_0005145
372 Ga0466964_0021525
373 Ga0466971_0038778
374 Ga0466970_0000292
375 Ga0466970_0011356
376 Ga0466957_0001576
377 Ga0466960_0001856
378 Ga0466959_0042031
379 Ga0466959_0131041
380 Ga0466958_0002907
381 Ga0466967_0005390
382 Ga0466967_0029020
383 Ga0466967_0046578
384 Ga0466967_0166933
385 Ga0466967_0228389
386 Ga0466967_0536589
387 Ga0495592_0061008
388 Ga0495590_0038113
389 Ga0495629_0006964
390 Ga0495629_0028355
391 Ga0495629_0045742
392 Ga0495638_0048255
393 Ga0495651_0002505
394 Ga0495651_0111120
395 Ga0495653_0115880
396 Ga0495582_0068376
397 Ga0495662_0006467
398 Ga0495662_0010499
399 Ga0495664_0004359
400 Ga0495585_0025331
401 Ga0495594_0006878
402 Ga0495594_0048077
403 Ga0495606_0002492
404 Ga0495608_0082434
405 Ga0495616_0004454
406 Ga0495618_0046825
407 Ga0495620_0003038
408 Ga0495628_0010112
409 Ga0495628_0131200
410 Ga0495631_0002505
411 Ga0495637_0021010
412 Ga0495643_0002231
413 Ga0495652_0028118
414 Ga0495652_0059248
415 Ga0495654_0041588
416 Ga0495586_0040133
417 Ga0495587_0009797
418 Ga0495645_0008585
419 Ga0495622_0012130
420 Ga0495633_0011969
421 Ga0495667_0037571
422 Ga0495656_0052730
423 Ga0495634_0004563
424 Ga0495634_0006797
425 Ga0495635_0012921
426 Ga0495661_0011932
427 Ga0495588_0034165
428 Ga0495657_0004839
429 Ga0495657_0033828
430 Ga0495657_0089364
431 Ga0495599_0078687
432 Ga0495646_0026827
433 Ga0495613_0001664
434 Ga0495613_0004397
435 Ga0495613_0015613
436 Ga0495613_0027842
437 Ga0495671_0006570
438 Ga0495589_0004470
439 Ga0495600_0012967
440 Ga0495581_0004000
441 Ga0495581_0075599
442 Ga0495581_0158711
443 Ga0495604_0002351
444 Ga0495636_0005270
445 Ga0495672_0044386
446 Ga0495676_0001590
447 Ga0495676_0060596
448 Ga0495680_0129171
449 Ga0495680_0167160
450 Ga0495687_004081
451 Ga0495675_0034092
452 Ga0495677_0073051
453 Ga0495685_005405
454 Ga0495681_0000493
455 Ga0495681_0033668
456 Ga0495686_0064526
457 Ga0495593_0003153
458 Ga0495593_0003506
459 Ga0495614_0002270
460 Ga0496100_0058403
461 Ga0496101_0008356
462 Ga0496104_0002769
463 Ga0496104_0043542
464 Ga0496104_0069717
465 Ga0496105_0009392
466 Ga0496105_0070502
467 Ga0496105_0194822
468 Ga0496107_0039773
469 Ga0496109_0217106
470 Ga0496109_0314168
471 Ga0496112_0095824
472 Ga0496112_0110658
473 Ga0496113_0095156
474 Ga0496114_0007842
475 Ga0496114_0030297
476 Ga0496126_0239969
477 Ga0501031_0005737
478 Ga0501031_0027541
479 Ga0501032_0005470
480 Ga0501033_0004249
481 Ga0501033_0138910
482 Ga0501034_0015479
483 Ga0501034_0025496
484 Ga0501034_0088539
485 Ga0501034_0283376
486 Ga0501036_0000337
487 Ga0501036_0014002
488 Ga0501036_0035654
489 Ga0501036_0051654
490 Ga0501036_0110811
491 Ga0501037_0004882
492 Ga0501037_0095740
493 Ga0501037_0099064
494 Ga0501038_0001678
495 Ga0501038_0020488
496 Ga0501038_0031351
497 Ga0501039_0003165
498 Ga0501042_0014076
499 Ga0501043_0003642
500 Ga0501043_0004286
501 Ga0501043_0011676
502 Ga0501046_0010001
503 Ga0501047_0001541
504 Ga0501047_0013526
505 Ga0501047_0016244
506 Ga0501048_0003811
507 Ga0501048_0054760
508 Ga0501048_0165877
509 Ga0501070_0001714
510 Ga0501070_0005824
511 Ga0501071_0026393
512 Ga0501072_0008310
513 Ga0501079_0059060
514 Ga0501080_0167566
515 Ga0501081_0052755
516 Ga0501035_0007011
517 Ga0501035_0011071
518 Ga0501035_0032852
519 Ga0501035_0045380
520 Ga0501035_0243482
521 Ga0501044_0007089
522 Ga0501044_0031981
523 Ga0501044_0040622
524 Ga0501044_0109074
525 Ga0501044_0348322
526 Ga0501045_0008949
527 nmdc:mga09592_37632_c1
528 Ga0495619_0030300
529 Ga0500640_002778
530 Ga0500572_003126
531 Ga0501084_0043659
532 Ga0530510_0017362
533 2585319503
534 2616696880
535 2644611369
536 2784589643
537 2785341969
538 2785370686
539 2786671869
540 2808843236
541 2808912825
542 2809233316
543 2812356807
544 2812375544
545 2812479528
546 2819424263
547 2819668227
548 2819692065
549 2819729820
550 2852640426
551 2862286766
552 2862292190
553 2862514381
554 2862578270
555 2862706071
556 2867428854
557 2867479138
558 2877679902
559 2912718555
560 2912730868
561 2935394874
562 2946069065
563 2947227872
564 2954003038
565 2954384858
566 2954678141
567 2954695671
568 2954710864
569 2990045367
570 2990088732
571 3006427237
572 3006492637
573 3006499670
574 8008490401
575 8008577882
576 8023626431
577 8025529703
578 8033689147
579 8056448881
580 8056833884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

138

425

0.91

PF09298

FAA_hydrolase_N

Fumarylacetoacetase N-terminal

36

133

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ti1-assembly1.cif.gz_B crystal structure of fumarylacetoacetate hydrolase from burkholderia xenovorans lb400 0.9379 15 404
1qqj-assembly1.cif.gz_A crystal structure of mouse fumarylacetoacetate hydrolase refined at 1.55 angstrom resolution 0.9366 1 404
5ti1-assembly4.cif.gz_G crystal structure of fumarylacetoacetate hydrolase from burkholderia xenovorans lb400 0.9362 15 404
1qqj-assembly1.cif.gz_A crystal structure of mouse fumarylacetoacetate hydrolase refined at 1.55 angstrom resolution 0.9344 1 404
5ti1-assembly1.cif.gz_A crystal structure of fumarylacetoacetate hydrolase from burkholderia xenovorans lb400 0.9299 15 404
ID Description Score Start End Superfamily
af_Q1ZXQ1_120_425_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9396 108 404 3.90.850.10
af_Q1ZXQ1_120_425_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9097 108 404 3.90.850.10
af_Q9VZI8_1_112_2.30.30.230 Mainly Beta;Roll;SH3 type barrels.;Fumarylacetoacetase, N-terminal domain 0.8802 6 106 2.30.30.230
af_O86346_1_303_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8522 17 404 3.90.850.10
af_O86346_1_303_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8496 17 404 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A7K2I6I0-F1-model_v4 Fumarylacetoacetase 0.9976 1 133 GO:0004334
GO:0006559
GO:0006572
GO:0046872
GO:1902000
AF-A0A2W2JGN3-F1-model_v4 Fumarylacetoacetase 0.9954 36 133 GO:0004334
GO:0006559
GO:0006572
GO:0046872
GO:1902000
AF-A0A7K2I6I0-F1-model_v4 Fumarylacetoacetase 0.9902 1 133 GO:0004334
GO:0006559
GO:0006572
GO:0046872
GO:1902000
AF-A0A6G3CB93-F1-model_v4 fumarylacetoacetase (EC 3.7.1.2) 0.9887 1 232 GO:0004334
GO:0006559
GO:0006572
GO:0046872
GO:1902000
AF-A0A4R1D2J5-F1-model_v4 deleted 0.9876 1 183

Map