F389831

General Info

Members Datasets Scaffolds Average Seq Length
290 136 580 468

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10003581|Ga0265338_1000358111
Length 521
Sequence MPLPSRQFEAALRIIETLRAEGHQAFLAGGCVRDLLLGRTPLDYDVATSATPDIVLNLFPRTFAVGAHFGVVLVADETLDETPPLEDAPDSAPRYSVTEVATFRCDGIYSDGRHPDEVRYTTRPEEDVQRRDFTINGLLLDPARILASANQSVRRPASHISSSLEAASLNQPVSGHDFSRAESAEKTTRALAPEPSLDPQLLRHAVFDHVGGLADLDLRLIRAIGEPHRRFQEDQLRLLRAVRFAARFGYTIEPSTFAAIRQFASRIQSVSRERVRDELTKMLTEGRARRAFELLDETGLLVQVLPEISNMKGVQQPPQFHPEGDVFIHTLLLLAQLPPRCPRTLAWGALLHDVGKPPTFRVAPDRIRFDGHVEVGVAMAAEICRRLRFSNEDTRQILALVENHMRFADAPRMKASTLKRFFRLPCFEEHLELHRMDCMAAHANLDIYNYVNDRYHSIAEEEFRPRPLLTGDDLIAAGYAPGPQFKQMLQAAEDAQLEGAIATPEEALALVRERFAGARPA

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
135 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
136 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.03
Nodule 0
Rhizoplane 3.45
Rhizosphere 94.14
Stem 0
Stem Tuber 0
Unclassified 5.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10003581 3300028800 Bacteria 21687
2 rootL2_10077554 3300003322 Bacteria 2982
3 Ga0070658_10000123 3300005327 Bacteria 68437
4 Ga0070658_10033253 3300005327 Unclassified 4148
5 Ga0070683_100000196 3300005329 Bacteria 40484
6 Ga0070683_100006867 3300005329 Bacteria 9564
7 Ga0070683_100015355 3300005329 Bacteria 6724
8 Ga0070683_100035950 3300005329 Bacteria 4531
9 Ga0070683_100045559 3300005329 Bacteria 4048
10 Ga0070683_100165295 3300005329 Bacteria 2099
11 Ga0070670_100070320 3300005331 Bacteria 3004
12 Ga0070670_100238180 3300005331 Unclassified 1584
13 Ga0068869_100025994 3300005334 Bacteria 4071
14 Ga0068868_100000302 3300005338 Bacteria 33173
15 Ga0068868_100012844 3300005338 Bacteria 6128
16 Ga0070660_100100630 3300005339 Bacteria 2289
17 Ga0070661_100043733 3300005344 Unclassified 3272
18 Ga0070661_100072184 3300005344 Bacteria 2540
19 Ga0070661_100149300 3300005344 Bacteria 1766
20 Ga0070671_100018584 3300005355 Bacteria 5647
21 Ga0070671_100159309 3300005355 Bacteria 1908
22 Ga0070659_100034646 3300005366 Bacteria 3928
23 Ga0070667_100026688 3300005367 Unclassified 4804
24 Ga0070714_100061536 3300005435 Bacteria 3225
25 Ga0070714_100070231 3300005435 Bacteria 3027
26 Ga0070713_100051421 3300005436 Unclassified 3407
27 Ga0070713_100072594 3300005436 Bacteria 2911
28 Ga0070713_100199207 3300005436 Bacteria 1807
29 Ga0070678_100036978 3300005456 Bacteria 3423
30 Ga0070681_10031976 3300005458 Bacteria 5282
31 Ga0070679_100223617 3300005530 Bacteria 1843
32 Ga0070684_100000283 3300005535 Bacteria 35271
33 Ga0070684_100009494 3300005535 Bacteria 7664
34 Ga0070684_100075019 3300005535 Bacteria 2982
35 Ga0068853_100000114 3300005539 Bacteria 55124
36 Ga0068853_100017458 3300005539 Bacteria 5923
37 Ga0068853_100088857 3300005539 Bacteria 2713
38 Ga0068853_100100955 3300005539 Bacteria 2551
39 Ga0068855_100004872 3300005563 Bacteria 16379
40 Ga0068855_100010959 3300005563 Bacteria 10939
41 Ga0068855_100051137 3300005563 Bacteria 4867
42 Ga0068855_100058803 3300005563 Bacteria 4500
43 Ga0068855_100128072 3300005563 Bacteria 2901
44 Ga0068855_100195957 3300005563 Bacteria 2276
45 Ga0068855_100236984 3300005563 Bacteria 2040
46 Ga0070664_100063100 3300005564 Unclassified 3159
47 Ga0070664_100206573 3300005564 Bacteria 1754
48 Ga0068857_100000316 3300005577 Bacteria 33442
49 Ga0068857_100185519 3300005577 Bacteria 1894
50 Ga0068854_100002914 3300005578 Bacteria 10616
51 Ga0068856_100001974 3300005614 Bacteria 21387
52 Ga0068856_100008719 3300005614 Bacteria 9865
53 Ga0068856_100034712 3300005614 Bacteria 4940
54 Ga0068856_100126850 3300005614 Unclassified 2555
55 Ga0068852_100000029 3300005616 Bacteria 105168
56 Ga0068852_100000033 3300005616 Bacteria 101433
57 Ga0068852_100029059 3300005616 Bacteria 4535
58 Ga0068851_10000942 3300005834 Bacteria 12599
59 Ga0068851_10001494 3300005834 Bacteria 10258
60 Ga0068863_100000559 3300005841 Bacteria 37755
61 Ga0068858_100001251 3300005842 Bacteria 26278
62 Ga0068858_100060918 3300005842 Bacteria 3488
63 Ga0068860_100000188 3300005843 Bacteria 98490
64 Ga0081540_1010817 3300005983 Bacteria 6134
65 Ga0070717_10006072 3300006028 Bacteria 8859
66 Ga0070717_10008897 3300006028 Bacteria 7523
67 Ga0097621_100000725 3300006237 Bacteria 23063
68 Ga0068871_100000942 3300006358 Bacteria 19432
69 Ga0068871_100029387 3300006358 Bacteria 4317
70 Ga0068871_100049679 3300006358 Bacteria 3391
71 Ga0075430_100206773 3300006846 Bacteria 1629
72 Ga0075431_100022947 3300006847 Bacteria 6379
73 Ga0075434_100009706 3300006871 Bacteria 8994
74 Ga0075435_100004432 3300007076 Bacteria 9641
75 Ga0105240_10000065 3300009093 Bacteria 213992
76 Ga0105240_10000125 3300009093 Bacteria 159027
77 Ga0105240_10002055 3300009093 Bacteria 33025
78 Ga0105240_10010970 3300009093 Bacteria 12689
79 Ga0105240_10042613 3300009093 Bacteria 5783
80 Ga0105240_10052327 3300009093 Bacteria 5135
81 Ga0105240_10115206 3300009093 Bacteria 3245
82 Ga0105240_10129774 3300009093 Bacteria 3025
83 Ga0105240_10188979 3300009093 Bacteria 2423
84 Ga0105240_10191187 3300009093 Bacteria 2407
85 Ga0105245_10001131 3300009098 Bacteria 24131
86 Ga0105245_10026559 3300009098 Bacteria 5098
87 Ga0105243_10083347 3300009148 Bacteria 2616
88 Ga0105241_10000043 3300009174 Bacteria 105124
89 Ga0105241_10000092 3300009174 Bacteria 67501
90 Ga0105241_10001563 3300009174 Bacteria 17511
91 Ga0105241_10005980 3300009174 Bacteria 8976
92 Ga0105241_10022636 3300009174 Bacteria 4655
93 Ga0105241_10027880 3300009174 Bacteria 4206
94 Ga0105241_10129646 3300009174 Bacteria 2040
95 Ga0105241_10177862 3300009174 Bacteria 1762
96 Ga0105248_10000052 3300009177 Bacteria 145431
97 Ga0105248_10002053 3300009177 Bacteria 22294
98 Ga0105248_10006622 3300009177 Bacteria 12697
99 Ga0105237_10000686 3300009545 Bacteria 46922
100 Ga0105237_10002505 3300009545 Bacteria 22765
101 Ga0105237_10048088 3300009545 Bacteria 4288
102 Ga0105238_10000083 3300009551 Bacteria 107423
103 Ga0105238_10000122 3300009551 Bacteria 85581
104 Ga0105238_10004199 3300009551 Bacteria 14300
105 Ga0105238_10050618 3300009551 Bacteria 4181
106 Ga0105238_10117766 3300009551 Bacteria 2637
107 Ga0105238_10126806 3300009551 Bacteria 2531
108 Ga0105249_10055424 3300009553 Bacteria 3626
109 Ga0105239_10002274 3300010375 Bacteria 24516
110 Ga0105239_10005499 3300010375 Bacteria 14849
111 Ga0105239_10033974 3300010375 Bacteria 5600
112 Ga0105239_10411830 3300010375 Bacteria 1531
113 Ga0157370_10000009 3300013104 Bacteria 231270
114 Ga0157370_10015701 3300013104 Bacteria 7691
115 Ga0157370_10018641 3300013104 Bacteria 6977
116 Ga0157370_10028395 3300013104 Bacteria 5502
117 Ga0157370_10031307 3300013104 Bacteria 5206
118 Ga0157370_10125319 3300013104 Bacteria 2398
119 Ga0157369_10000022 3300013105 Bacteria 233081
120 Ga0157369_10001545 3300013105 Bacteria 28182
121 Ga0157369_10002717 3300013105 Bacteria 21119
122 Ga0157369_10004782 3300013105 Bacteria 15920
123 Ga0157369_10007000 3300013105 Bacteria 13013
124 Ga0157369_10009600 3300013105 Bacteria 11065
125 Ga0157369_10022573 3300013105 Bacteria 7019
126 Ga0157369_10056940 3300013105 Bacteria 4218
127 Ga0157374_10141091 3300013296 Bacteria 2339
128 Ga0157378_10017037 3300013297 Bacteria 6369
129 Ga0157378_10080023 3300013297 Unclassified 2951
130 Ga0163162_10044448 3300013306 Bacteria 4449
131 Ga0157372_10000040 3300013307 Bacteria 163677
132 Ga0157372_10001480 3300013307 Bacteria 25505
133 Ga0157372_10002407 3300013307 Bacteria 20270
134 Ga0157372_10011527 3300013307 Bacteria 9402
135 Ga0157372_10015073 3300013307 Bacteria 8274
136 Ga0157372_10069950 3300013307 Bacteria 3948
137 Ga0157372_10073519 3300013307 Bacteria 3854
138 Ga0157372_10074842 3300013307 Bacteria 3819
139 Ga0157372_10107312 3300013307 Unclassified 3195
140 Ga0157375_10009888 3300013308 Bacteria 8389
141 Ga0157375_10084183 3300013308 Unclassified 3228
142 Ga0163163_10025481 3300014325 Bacteria 5638
143 Ga0157379_10000074 3300014968 Bacteria 64363
144 Ga0157379_10034540 3300014968 Bacteria 4509
145 Ga0157376_10000355 3300014969 Bacteria 30465
146 Ga0157376_10138678 3300014969 Unclassified 2179
147 Ga0163161_10078441 3300017792 Bacteria 2427
148 Ga0209233_1003152 3300025261 Bacteria 5850
149 Ga0207697_10019306 3300025315 Unclassified 2791
150 Ga0207656_10012908 3300025321 Unclassified 3182
151 Ga0207656_10039805 3300025321 Bacteria 1990
152 Ga0207680_10067807 3300025903 Bacteria 2199
153 Ga0207705_10000100 3300025909 Bacteria 102196
154 Ga0207705_10032860 3300025909 Bacteria 3707
155 Ga0207654_10000019 3300025911 Bacteria 171031
156 Ga0207654_10000453 3300025911 Bacteria 23462
157 Ga0207654_10002861 3300025911 Bacteria 8753
158 Ga0207654_10011534 3300025911 Bacteria 4511
159 Ga0207654_10056698 3300025911 Bacteria 2274
160 Ga0207654_10082038 3300025911 Bacteria 1943
161 Ga0207707_10046948 3300025912 Bacteria 3761
162 Ga0207707_10074315 3300025912 Unclassified 2964
163 Ga0207695_10000052 3300025913 Bacteria 398089
164 Ga0207695_10000080 3300025913 Bacteria 287868
165 Ga0207695_10000210 3300025913 Bacteria 157198
166 Ga0207695_10000338 3300025913 Bacteria 110289
167 Ga0207695_10055449 3300025913 Bacteria 4130
168 Ga0207671_10000068 3300025914 Bacteria 161429
169 Ga0207671_10000145 3300025914 Bacteria 109306
170 Ga0207671_10142254 3300025914 Bacteria 1849
171 Ga0207657_10045097 3300025919 Bacteria 3872
172 Ga0207649_10042084 3300025920 Bacteria 2784
173 Ga0207694_10000043 3300025924 Bacteria 171251
174 Ga0207694_10000085 3300025924 Bacteria 108662
175 Ga0207694_10004479 3300025924 Bacteria 10902
176 Ga0207694_10022683 3300025924 Bacteria 4762
177 Ga0207694_10024542 3300025924 Bacteria 4579
178 Ga0207694_10063573 3300025924 Bacteria 2875
179 Ga0207687_10001384 3300025927 Bacteria 16552
180 Ga0207700_10016588 3300025928 Bacteria 4898
181 Ga0207700_10096839 3300025928 Bacteria 2344
182 Ga0207664_10180612 3300025929 Bacteria 1811
183 Ga0207644_10013472 3300025931 Bacteria 5453
184 Ga0207711_10000016 3300025941 Bacteria 486741
185 Ga0207711_10024249 3300025941 Bacteria 5078
186 Ga0207689_10000702 3300025942 Bacteria 32071
187 Ga0207689_10016019 3300025942 Bacteria 6345
188 Ga0207661_10000209 3300025944 Bacteria 37759
189 Ga0207661_10011410 3300025944 Bacteria 6437
190 Ga0207661_10027194 3300025944 Bacteria 4368
191 Ga0207661_10045500 3300025944 Bacteria 3474
192 Ga0207679_10045483 3300025945 Unclassified 3175
193 Ga0207679_10176262 3300025945 Bacteria 1765
194 Ga0207667_10009267 3300025949 Bacteria 11619
195 Ga0207667_10011980 3300025949 Bacteria 10038
196 Ga0207667_10013509 3300025949 Bacteria 9337
197 Ga0207667_10026354 3300025949 Bacteria 6353
198 Ga0207667_10057020 3300025949 Bacteria 4102
199 Ga0207640_10001979 3300025981 Bacteria 11043
200 Ga0207640_10048466 3300025981 Bacteria 2746
201 Ga0207640_10073796 3300025981 Bacteria 2306
202 Ga0207677_10000341 3300026023 Bacteria 33150
203 Ga0207703_10000500 3300026035 Bacteria 40575
204 Ga0207639_10000072 3300026041 Bacteria 94533
205 Ga0207639_10039662 3300026041 Bacteria 3510
206 Ga0207702_10000205 3300026078 Bacteria 70125
207 Ga0207702_10001023 3300026078 Bacteria 28721
208 Ga0207702_10012654 3300026078 Bacteria 7023
209 Ga0207702_10024853 3300026078 Bacteria 4971
210 Ga0207702_10036788 3300026078 Bacteria 4095
211 Ga0207641_10001066 3300026088 Bacteria 27665
212 Ga0207674_10000122 3300026116 Bacteria 90389
213 Ga0207674_10000239 3300026116 Bacteria 68575
214 Ga0207674_10000798 3300026116 Bacteria 40990
215 Ga0207683_10010968 3300026121 Bacteria 7727
216 Ga0207698_10000007 3300026142 Bacteria 289457
217 Ga0207698_10000040 3300026142 Bacteria 100053
218 Ga0207698_10009692 3300026142 Bacteria 6150
219 Ga0207698_10104811 3300026142 Bacteria 2354
220 Ga0268264_10000275 3300028381 Bacteria 88501
221 Ga0265338_10001309 3300028800 Bacteria 40797
222 Ga0265338_10140314 3300028800 Bacteria 1894
223 Ga0265330_10010682 3300031235 Bacteria 4321
224 Ga0265330_10037862 3300031235 Bacteria 2145
225 Ga0265325_10037435 3300031241 Bacteria 2564
226 Ga0265329_10016018 3300031242 Bacteria 2607
227 Ga0265339_10000300 3300031249 Bacteria 40394
228 Ga0265339_10000639 3300031249 Bacteria 27060
229 Ga0265316_10003064 3300031344 Bacteria 17054
230 Ga0265316_10005571 3300031344 Bacteria 12207
231 Ga0265316_10010166 3300031344 Bacteria 8595
232 Ga0265313_10051192 3300031595 Bacteria 1977
233 Ga0265314_10000731 3300031711 Bacteria 39545
234 Ga0265314_10002772 3300031711 Bacteria 17507
235 Ga0265314_10021870 3300031711 Bacteria 4906
236 Ga0265342_10009999 3300031712 Bacteria 6627
237 Ga0307510_10090122 3300033180 Bacteria 2915
238 Ga0307510_10177291 3300033180 Bacteria 1700
239 Ga0373955_0060237 3300035172 Bacteria 2093
240 Ga0373955_0076400 3300035172 Unclassified 1884
241 Ga0373931_0016053 3300035691 Bacteria 3682
242 Ga0373935_0034886 3300035692 Bacteria 3137
243 Ga0373927_0045937 3300035695 Bacteria 2826
244 Ga0373937_0000027 3300036401 Bacteria 123975
245 Ga0373937_0060096 3300036401 Bacteria 3493
246 Ga0436360_0204520 3300039438 Bacteria 8806
247 Ga0436361_0500168 3300039447 Bacteria 41610
248 Ga0436361_0786173 3300039447 Bacteria 5619
249 Ga0436361_1202653 3300039447 Bacteria 36636
250 Ga0436362_1056131 3300039453 Bacteria 1662
251 Ga0466966_0095667 3300044684 Bacteria 1840
252 Ga0466963_0070361 3300044694 Bacteria 2353
253 Ga0453684_0000046 3300044712 Bacteria 575242
254 Ga0466967_0001761 3300045976 Bacteria 12947
255 Ga0495629_0060393 3300046459 Bacteria 2650
256 Ga0495580_0001742 3300046472 Bacteria 19130
257 Ga0495580_0073349 3300046472 Bacteria 2390
258 Ga0495639_0047293 3300046475 Bacteria 1949
259 Ga0495630_0116071 3300046517 Bacteria 2029
260 Ga0495665_0056518 3300046531 Bacteria 2072
261 Ga0495625_0012571 3300046660 Bacteria 6852
262 Ga0495625_0030632 3300046660 Bacteria 4012
263 Ga0495623_0050922 3300046679 Bacteria 2621
264 Ga0495649_0002416 3300046694 Bacteria 13176
265 Ga0495581_0046625 3300047315 Bacteria 2505
266 Ga0495674_0024668 3300047319 Bacteria 5521
267 Ga0495675_0006541 3300047444 Bacteria 7135
268 Ga0495675_0073462 3300047444 Bacteria 2157
269 Ga0495684_0045862 3300047471 Bacteria 3344
270 Ga0495686_0000009 3300047472 Bacteria 661643
271 Ga0495686_0002802 3300047472 Bacteria 15826
272 Ga0495686_0011554 3300047472 Bacteria 6218
273 Ga0496101_0037586 3300048904 Bacteria 3435
274 Ga0496104_0000031 3300048907 Bacteria 194537
275 Ga0496104_0041755 3300048907 Bacteria 4302
276 Ga0496104_0087571 3300048907 Bacteria 2974
277 Ga0496104_0281454 3300048907 Bacteria 1576
278 Ga0496107_0039970 3300048910 Bacteria 3366
279 Ga0496112_0007234 3300048915 Bacteria 9838
280 Ga0496112_0032206 3300048915 Bacteria 5089
281 Ga0496113_0030710 3300048916 Bacteria 3891
282 Ga0496114_0013855 3300048917 Bacteria 6464
283 Ga0496126_0000029 3300048929 Bacteria 389370
284 Ga0501033_0079770 3300049570 Bacteria 2402
285 nmdc:mga06r32_81625_c1 3300050510 Bacteria 3149
286 nmdc:mga0n895_4537_c1 3300050512 Bacteria 11431
287 nmdc:mga0rr50_1690_c1 3300050513 Bacteria 12192
288 Ga0500595_030484 3300053119 Bacteria 1816
289 Ga0500661_002410 3300055283 Bacteria 3529
290 Ga0501082_0094751 3300060353 Bacteria 2580
291 Ga0265338_10003581
292 rootL2_10077554
293 Ga0070658_10000123
294 Ga0070658_10033253
295 Ga0070683_100000196
296 Ga0070683_100006867
297 Ga0070683_100015355
298 Ga0070683_100035950
299 Ga0070683_100045559
300 Ga0070683_100165295
301 Ga0070670_100070320
302 Ga0070670_100238180
303 Ga0068869_100025994
304 Ga0068868_100000302
305 Ga0068868_100012844
306 Ga0070660_100100630
307 Ga0070661_100043733
308 Ga0070661_100072184
309 Ga0070661_100149300
310 Ga0070671_100018584
311 Ga0070671_100159309
312 Ga0070659_100034646
313 Ga0070667_100026688
314 Ga0070714_100061536
315 Ga0070714_100070231
316 Ga0070713_100051421
317 Ga0070713_100072594
318 Ga0070713_100199207
319 Ga0070678_100036978
320 Ga0070681_10031976
321 Ga0070679_100223617
322 Ga0070684_100000283
323 Ga0070684_100009494
324 Ga0070684_100075019
325 Ga0068853_100000114
326 Ga0068853_100017458
327 Ga0068853_100088857
328 Ga0068853_100100955
329 Ga0068855_100004872
330 Ga0068855_100010959
331 Ga0068855_100051137
332 Ga0068855_100058803
333 Ga0068855_100128072
334 Ga0068855_100195957
335 Ga0068855_100236984
336 Ga0070664_100063100
337 Ga0070664_100206573
338 Ga0068857_100000316
339 Ga0068857_100185519
340 Ga0068854_100002914
341 Ga0068856_100001974
342 Ga0068856_100008719
343 Ga0068856_100034712
344 Ga0068856_100126850
345 Ga0068852_100000029
346 Ga0068852_100000033
347 Ga0068852_100029059
348 Ga0068851_10000942
349 Ga0068851_10001494
350 Ga0068863_100000559
351 Ga0068858_100001251
352 Ga0068858_100060918
353 Ga0068860_100000188
354 Ga0081540_1010817
355 Ga0070717_10006072
356 Ga0070717_10008897
357 Ga0097621_100000725
358 Ga0068871_100000942
359 Ga0068871_100029387
360 Ga0068871_100049679
361 Ga0075430_100206773
362 Ga0075431_100022947
363 Ga0075434_100009706
364 Ga0075435_100004432
365 Ga0105240_10000065
366 Ga0105240_10000125
367 Ga0105240_10002055
368 Ga0105240_10010970
369 Ga0105240_10042613
370 Ga0105240_10052327
371 Ga0105240_10115206
372 Ga0105240_10129774
373 Ga0105240_10188979
374 Ga0105240_10191187
375 Ga0105245_10001131
376 Ga0105245_10026559
377 Ga0105243_10083347
378 Ga0105241_10000043
379 Ga0105241_10000092
380 Ga0105241_10001563
381 Ga0105241_10005980
382 Ga0105241_10022636
383 Ga0105241_10027880
384 Ga0105241_10129646
385 Ga0105241_10177862
386 Ga0105248_10000052
387 Ga0105248_10002053
388 Ga0105248_10006622
389 Ga0105237_10000686
390 Ga0105237_10002505
391 Ga0105237_10048088
392 Ga0105238_10000083
393 Ga0105238_10000122
394 Ga0105238_10004199
395 Ga0105238_10050618
396 Ga0105238_10117766
397 Ga0105238_10126806
398 Ga0105249_10055424
399 Ga0105239_10002274
400 Ga0105239_10005499
401 Ga0105239_10033974
402 Ga0105239_10411830
403 Ga0157370_10000009
404 Ga0157370_10015701
405 Ga0157370_10018641
406 Ga0157370_10028395
407 Ga0157370_10031307
408 Ga0157370_10125319
409 Ga0157369_10000022
410 Ga0157369_10001545
411 Ga0157369_10002717
412 Ga0157369_10004782
413 Ga0157369_10007000
414 Ga0157369_10009600
415 Ga0157369_10022573
416 Ga0157369_10056940
417 Ga0157374_10141091
418 Ga0157378_10017037
419 Ga0157378_10080023
420 Ga0163162_10044448
421 Ga0157372_10000040
422 Ga0157372_10001480
423 Ga0157372_10002407
424 Ga0157372_10011527
425 Ga0157372_10015073
426 Ga0157372_10069950
427 Ga0157372_10073519
428 Ga0157372_10074842
429 Ga0157372_10107312
430 Ga0157375_10009888
431 Ga0157375_10084183
432 Ga0163163_10025481
433 Ga0157379_10000074
434 Ga0157379_10034540
435 Ga0157376_10000355
436 Ga0157376_10138678
437 Ga0163161_10078441
438 Ga0209233_1003152
439 Ga0207697_10019306
440 Ga0207656_10012908
441 Ga0207656_10039805
442 Ga0207680_10067807
443 Ga0207705_10000100
444 Ga0207705_10032860
445 Ga0207654_10000019
446 Ga0207654_10000453
447 Ga0207654_10002861
448 Ga0207654_10011534
449 Ga0207654_10056698
450 Ga0207654_10082038
451 Ga0207707_10046948
452 Ga0207707_10074315
453 Ga0207695_10000052
454 Ga0207695_10000080
455 Ga0207695_10000210
456 Ga0207695_10000338
457 Ga0207695_10055449
458 Ga0207671_10000068
459 Ga0207671_10000145
460 Ga0207671_10142254
461 Ga0207657_10045097
462 Ga0207649_10042084
463 Ga0207694_10000043
464 Ga0207694_10000085
465 Ga0207694_10004479
466 Ga0207694_10022683
467 Ga0207694_10024542
468 Ga0207694_10063573
469 Ga0207687_10001384
470 Ga0207700_10016588
471 Ga0207700_10096839
472 Ga0207664_10180612
473 Ga0207644_10013472
474 Ga0207711_10000016
475 Ga0207711_10024249
476 Ga0207689_10000702
477 Ga0207689_10016019
478 Ga0207661_10000209
479 Ga0207661_10011410
480 Ga0207661_10027194
481 Ga0207661_10045500
482 Ga0207679_10045483
483 Ga0207679_10176262
484 Ga0207667_10009267
485 Ga0207667_10011980
486 Ga0207667_10013509
487 Ga0207667_10026354
488 Ga0207667_10057020
489 Ga0207640_10001979
490 Ga0207640_10048466
491 Ga0207640_10073796
492 Ga0207677_10000341
493 Ga0207703_10000500
494 Ga0207639_10000072
495 Ga0207639_10039662
496 Ga0207702_10000205
497 Ga0207702_10001023
498 Ga0207702_10012654
499 Ga0207702_10024853
500 Ga0207702_10036788
501 Ga0207641_10001066
502 Ga0207674_10000122
503 Ga0207674_10000239
504 Ga0207674_10000798
505 Ga0207683_10010968
506 Ga0207698_10000007
507 Ga0207698_10000040
508 Ga0207698_10009692
509 Ga0207698_10104811
510 Ga0268264_10000275
511 Ga0265338_10001309
512 Ga0265338_10140314
513 Ga0265330_10010682
514 Ga0265330_10037862
515 Ga0265325_10037435
516 Ga0265329_10016018
517 Ga0265339_10000300
518 Ga0265339_10000639
519 Ga0265316_10003064
520 Ga0265316_10005571
521 Ga0265316_10010166
522 Ga0265313_10051192
523 Ga0265314_10000731
524 Ga0265314_10002772
525 Ga0265314_10021870
526 Ga0265342_10009999
527 Ga0307510_10090122
528 Ga0307510_10177291
529 Ga0373955_0060237
530 Ga0373955_0076400
531 Ga0373931_0016053
532 Ga0373935_0034886
533 Ga0373927_0045937
534 Ga0373937_0000027
535 Ga0373937_0060096
536 Ga0436360_0204520
537 Ga0436361_0500168
538 Ga0436361_0786173
539 Ga0436361_1202653
540 Ga0436362_1056131
541 Ga0466966_0095667
542 Ga0466963_0070361
543 Ga0453684_0000046
544 Ga0466967_0001761
545 Ga0495629_0060393
546 Ga0495580_0001742
547 Ga0495580_0073349
548 Ga0495639_0047293
549 Ga0495630_0116071
550 Ga0495665_0056518
551 Ga0495625_0012571
552 Ga0495625_0030632
553 Ga0495623_0050922
554 Ga0495649_0002416
555 Ga0495581_0046625
556 Ga0495674_0024668
557 Ga0495675_0006541
558 Ga0495675_0073462
559 Ga0495684_0045862
560 Ga0495686_0000009
561 Ga0495686_0002802
562 Ga0495686_0011554
563 Ga0496101_0037586
564 Ga0496104_0000031
565 Ga0496104_0041755
566 Ga0496104_0087571
567 Ga0496104_0281454
568 Ga0496107_0039970
569 Ga0496112_0007234
570 Ga0496112_0032206
571 Ga0496113_0030710
572 Ga0496114_0013855
573 Ga0496126_0000029
574 Ga0501033_0079770
575 nmdc:mga06r32_81625_c1
576 nmdc:mga0n895_4537_c1
577 nmdc:mga0rr50_1690_c1
578 Ga0500595_030484
579 Ga0500661_002410
580 Ga0501082_0094751

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

249

312

0.97

PF01743

PolyA_pol

Poly A polymerase head domain

25

149

0.94

PF01966

HD

HD domain

326

439

0.8

PF13735

tRNA_NucTran2_2

tRNA nucleotidyltransferase domain 2 putative

372

511

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6tvz-assembly1.cif.gz_A structure of a psychrophilic cca-adding enzyme crystallized in the xtalcontroller device 0.8462 3 455
6tvz-assembly1.cif.gz_A structure of a psychrophilic cca-adding enzyme crystallized in the xtalcontroller device 0.8419 3 455
1miy-assembly1.cif.gz_A crystal structure of bacillus stearothermophilus cca-adding enzyme in complex with ctp 0.8386 2 454
6qy6-assembly1.cif.gz_A crystal structure of the cca-adding enzyme of a psychrophilic organism 0.8357 2 455
6qxn-assembly1.cif.gz_A crystal structure of the cca-adding enzyme of a psychrophilic organism in complex with ctp 0.8344 3 455
ID Description Score Start End Superfamily
1miwB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9376 3 164 3.30.460.10
1miwB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9308 3 164 3.30.460.10
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9306 36 162 3.30.460.10
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9143 36 162 3.30.460.10
af_L7N672_164_416_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.8894 165 397 1.10.3090.10
ID Description Score Start End GO Terms
AF-A0A7Y5RB85-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9883 1 459 GO:0000049
GO:0000166
GO:0008033
GO:0016779
AF-A0A1V4X638-F1-model_v4 Multifunctional CCA protein 0.9843 179 459
AF-A0A836QUX8-F1-model_v4 CCA tRNA nucleotidyltransferase 0.972 2 380 GO:0000049
GO:0000166
GO:0008033
GO:0016779
AF-A0A2H0PIX6-F1-model_v4 Phosphohydrolase 0.9711 5 455 GO:0003723
GO:0005524
GO:0008033
GO:0016779
GO:0016787
GO:0042245
GO:0046872
AF-A0A2E3J8Q1-F1-model_v4 Phosphohydrolase 0.971 7 457 GO:0000049
GO:0000166
GO:0008033
GO:0016779
GO:0016787

Map