F389481

General Info

Members Datasets Scaffolds Average Seq Length
289 189 578 298

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221678|2644436249
Length 343
Sequence TRAREAQGLREAQRNREAGEVREAGEVREARGTGGSEIRRHELAAFLRSRRERITPEQVGLPRGARRRTPGLRREEVAHLSAVGVTWYTWLEQSRDIQVSVQVLDALARTLLLDPSERAHLFQLAAATDPTPASSCTGITDAVREVLDQLDPLPACVQNSRYDILAYNRTYARLLCDLDAIPPEDRNCMILVHTHPQWRESVVHLDETMRLMAAKLRASMAGHLTEPAWKMLVKRLQSESPEFRENWERYEVVATRSKTKQFRNPHVGLLDLTHTDLWLSPELGARLVTYAPADEVTRERLEKLYAFARTASAESGGSAGAAERAGTAEIAGGAGAVRRGVRR

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
13 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
16 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
17 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
18 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
19 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
20 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
23 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
26 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
29 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
30 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
31 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
32 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
39 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
40 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
41 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
42 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
43 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
64 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
65 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
77 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
83 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
99 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
137 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
138 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
139 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
140 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
141 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
142 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
143 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
144 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
145 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
146 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
147 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
148 2643221647 Streptomyces sp. Root369 Isolate Unclassified
149 2643221670 Streptomyces sp. Root431 Isolate Unclassified
150 2643221714 Streptomyces sp. Root264 Isolate Unclassified
151 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
152 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
153 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
154 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
155 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
156 2808606448 Streptomyces sp. 193411 Isolate Unclassified
157 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
158 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
159 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
160 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
161 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
162 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
163 2867428634 Streptomyces sp. RP5T Isolate Unclassified
164 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
165 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
166 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
167 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
168 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
169 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
170 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
171 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
172 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
173 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
174 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
175 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
176 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
177 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
178 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
179 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
180 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
181 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
182 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
183 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
184 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
185 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
186 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
187 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
188 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
189 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.7
Metatranscriptomes 0.69
Isolates 16.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.54
Nodule 0
Rhizoplane 2.42
Rhizosphere 73.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10013950 3300001989 Bacteria 2927
2 JGI24737J22298_10022633 3300001990 Bacteria 1997
3 rootH1_10070781 3300003316 Bacteria 2681
4 rootH1_10096266 3300003316 Bacteria 1522
5 rootL2_10058260 3300003322 Bacteria 1667
6 Ga0006562J51391_1118238 3300003578 Bacteria 4300
7 Ga0006562J51391_1118240 3300003578 Bacteria 2980
8 Ga0070711_100046049 3300005439 Bacteria 2970
9 Ga0070698_100500376 3300005471 Bacteria 1153
10 Ga0068856_100159604 3300005614 Bacteria 2265
11 Ga0081455_10008369 3300005937 Bacteria 10765
12 Ga0081455_10030432 3300005937 Bacteria 4902
13 Ga0075368_10040864 3300006042 Bacteria 1821
14 Ga0075363_100005435 3300006048 Bacteria 5666
15 Ga0075363_100019846 3300006048 Bacteria 3365
16 Ga0075370_10172104 3300006353 Bacteria 1273
17 Ga0075433_10064750 3300006852 Bacteria 3205
18 Ga0114129_10149568 3300009147 Bacteria 3196
19 Ga0105243_10350710 3300009148 Bacteria 1355
20 Ga0157369_10172609 3300013105 Bacteria 2278
21 Ga0183367_1009 3300015688 Bacteria 484598
22 Ga0209758_1005749 3300025297 Bacteria 9338
23 Ga0207426_1001250 3300025302 Bacteria 22267
24 Ga0207426_1002287 3300025302 Bacteria 12639
25 Ga0207647_10085334 3300025904 Bacteria 1889
26 Ga0207709_10208918 3300025935 Bacteria 1399
27 Ga0209813_10027626 3300027866 Bacteria 1649
28 Ga0307517_10009378 3300028786 Bacteria 13864
29 Ga0307515_10000694 3300028794 Bacteria 77618
30 Ga0307515_10151149 3300028794 Bacteria 2426
31 Ga0307511_10012485 3300030521 Bacteria 8334
32 Ga0307511_10028525 3300030521 Bacteria 5064
33 Ga0307511_10076367 3300030521 Bacteria 2395
34 Ga0307512_10010397 3300030522 Bacteria 8877
35 Ga0307512_10098130 3300030522 Bacteria 2001
36 Ga0307512_10108719 3300030522 Bacteria 1838
37 Ga0307512_10191724 3300030522 Bacteria 1126
38 Ga0307513_10080897 3300031456 Bacteria 3349
39 Ga0307509_10022015 3300031507 Bacteria 7196
40 Ga0307509_10075812 3300031507 Bacteria 3492
41 Ga0307509_10082604 3300031507 Bacteria 3314
42 Ga0307508_10014780 3300031616 Bacteria 7117
43 Ga0307508_10027655 3300031616 Bacteria 5132
44 Ga0307508_10033730 3300031616 Bacteria 4619
45 Ga0307508_10046407 3300031616 Bacteria 3879
46 Ga0307514_10053597 3300031649 Bacteria 3111
47 Ga0307516_10004212 3300031730 Bacteria 17915
48 Ga0307516_10032251 3300031730 Bacteria 5276
49 Ga0307516_10414228 3300031730 Bacteria 1006
50 Ga0307518_10021072 3300031838 Bacteria 4686
51 Ga0307518_10059753 3300031838 Bacteria 2768
52 Ga0307518_10193931 3300031838 Bacteria 1357
53 Ga0307507_10135148 3300033179 Bacteria 1913
54 Ga0307507_10160668 3300033179 Bacteria 1661
55 Ga0307510_10016705 3300033180 Bacteria 8659
56 Ga0307510_10124933 3300033180 Bacteria 2265
57 Ga0395898_0006002 3300037466 Bacteria 13041
58 Ga0395898_0172546 3300037466 Bacteria 2067
59 Ga0451853_0839226 3300041512 Bacteria 3100
60 Ga0439449_0040039 3300042007 Bacteria 1742
61 Ga0450903_000924 3300042138 Bacteria 5634
62 Ga0439458_0000308 3300042157 Bacteria 12147
63 Ga0439458_0010206 3300042157 Bacteria 2091
64 Ga0450901_007009 3300042533 Bacteria 1161
65 Ga0466969_0031308 3300044656 Bacteria 2709
66 Ga0466969_0048073 3300044656 Bacteria 2110
67 Ga0466972_0002658 3300044658 Bacteria 8848
68 Ga0466972_0004831 3300044658 Bacteria 6759
69 Ga0466972_0011113 3300044658 Bacteria 4519
70 Ga0466972_0088342 3300044658 Bacteria 1471
71 Ga0466965_0001474 3300044683 Bacteria 9516
72 Ga0466965_0034678 3300044683 Bacteria 2469
73 Ga0466965_0075029 3300044683 Bacteria 1705
74 Ga0466965_0125303 3300044683 Bacteria 1329
75 Ga0466966_0004025 3300044684 Bacteria 9704
76 Ga0466961_0019001 3300044693 Bacteria 4421
77 Ga0466961_0033379 3300044693 Bacteria 3307
78 Ga0466961_0215191 3300044693 Bacteria 1185
79 Ga0466963_0000228 3300044694 Bacteria 24082
80 Ga0466963_0000601 3300044694 Bacteria 17213
81 Ga0466963_0095347 3300044694 Bacteria 2031
82 Ga0466964_0003679 3300044706 Bacteria 5612
83 Ga0466971_0000104 3300044719 Bacteria 31458
84 Ga0466971_0007664 3300044719 Bacteria 4709
85 Ga0466968_0006968 3300044735 Bacteria 4281
86 Ga0466970_0000447 3300044765 Bacteria 20242
87 Ga0466957_0000135 3300044842 Bacteria 31380
88 Ga0466960_0005120 3300044901 Bacteria 5185
89 Ga0466959_0000505 3300045049 Bacteria 22659
90 Ga0466959_0033788 3300045049 Bacteria 3783
91 Ga0466958_0000091 3300045836 Bacteria 27740
92 Ga0466967_0059528 3300045976 Bacteria 3381
93 Ga0466967_0100078 3300045976 Bacteria 2648
94 Ga0495592_0000576 3300046454 Bacteria 26018
95 Ga0495592_0003645 3300046454 Bacteria 11087
96 Ga0495603_0002843 3300046455 Bacteria 10224
97 Ga0495603_0016942 3300046455 Bacteria 4409
98 Ga0495629_0005372 3300046459 Bacteria 9560
99 Ga0495629_0007621 3300046459 Bacteria 7972
100 Ga0495629_0042610 3300046459 Bacteria 3188
101 Ga0495629_0195086 3300046459 Bacteria 1400
102 Ga0495651_0001088 3300046462 Bacteria 20919
103 Ga0495653_0028428 3300046463 Bacteria 4469
104 Ga0495580_0013694 3300046472 Bacteria 6179
105 Ga0495662_0000627 3300046476 Bacteria 16424
106 Ga0495662_0001431 3300046476 Bacteria 11819
107 Ga0495664_0000897 3300046477 Bacteria 15290
108 Ga0495664_0046057 3300046477 Bacteria 2587
109 Ga0495594_0108491 3300046499 Bacteria 1564
110 Ga0495594_0174946 3300046499 Bacteria 1221
111 Ga0495583_0021256 3300046506 Bacteria 3343
112 Ga0495608_0002343 3300046511 Bacteria 13650
113 Ga0495618_0009311 3300046514 Bacteria 5929
114 Ga0495628_0012146 3300046516 Bacteria 7259
115 Ga0495628_0055207 3300046516 Bacteria 3129
116 Ga0495630_0033761 3300046517 Bacteria 3816
117 Ga0495630_0081218 3300046517 Bacteria 2446
118 Ga0495631_0049166 3300046518 Bacteria 1847
119 Ga0495666_0012164 3300046526 Bacteria 4295
120 Ga0495652_0007059 3300046529 Bacteria 10376
121 Ga0495652_0062249 3300046529 Bacteria 3146
122 Ga0495640_0014936 3300046533 Bacteria 5857
123 Ga0495640_0019524 3300046533 Bacteria 5000
124 Ga0495586_0004758 3300046535 Bacteria 7260
125 Ga0495645_0002099 3300046543 Bacteria 13540
126 Ga0495645_0005277 3300046543 Bacteria 8850
127 Ga0495645_0016564 3300046543 Bacteria 5267
128 Ga0495622_0004972 3300046557 Bacteria 6159
129 Ga0495667_0013387 3300046559 Bacteria 5552
130 Ga0495634_0001729 3300046642 Bacteria 18914
131 Ga0495611_0038741 3300046648 Bacteria 2121
132 Ga0495625_0003462 3300046660 Bacteria 15715
133 Ga0495635_0008296 3300046663 Bacteria 7249
134 Ga0495588_0001494 3300046674 Bacteria 10019
135 Ga0495588_0044449 3300046674 Bacteria 2275
136 Ga0495657_0010913 3300046675 Bacteria 6815
137 Ga0495657_0021309 3300046675 Bacteria 4650
138 Ga0495623_0177997 3300046679 Bacteria 1237
139 Ga0495646_0036089 3300046680 Bacteria 3064
140 Ga0495646_0111805 3300046680 Bacteria 1554
141 Ga0495613_0001741 3300046689 Bacteria 16567
142 Ga0495613_0002310 3300046689 Bacteria 14446
143 Ga0495613_0003083 3300046689 Bacteria 12448
144 Ga0495613_0081551 3300046689 Bacteria 2350
145 Ga0495624_0116347 3300046690 Bacteria 1643
146 Ga0495671_0006456 3300046692 Bacteria 6773
147 Ga0495600_0012640 3300046809 Bacteria 5284
148 Ga0495600_0292234 3300046809 Bacteria 1029
149 Ga0495581_0010649 3300047315 Bacteria 5316
150 Ga0495581_0139866 3300047315 Bacteria 1412
151 Ga0495604_0001083 3300047317 Bacteria 22589
152 Ga0495604_0004510 3300047317 Bacteria 11031
153 Ga0495636_0003141 3300047318 Bacteria 6405
154 Ga0495636_0038158 3300047318 Bacteria 1986
155 Ga0495636_0095432 3300047318 Bacteria 1295
156 Ga0495674_0027286 3300047319 Bacteria 5218
157 Ga0495674_0148023 3300047319 Bacteria 1970
158 Ga0495676_0000862 3300047321 Bacteria 25339
159 Ga0495676_0031933 3300047321 Bacteria 4448
160 Ga0495676_0189034 3300047321 Bacteria 1437
161 Ga0495683_0030489 3300047323 Bacteria 2751
162 Ga0495687_000383 3300047443 Bacteria 54908
163 Ga0495675_0017308 3300047444 Bacteria 4567
164 Ga0495685_004747 3300047447 Bacteria 4408
165 Ga0495685_007033 3300047447 Bacteria 3705
166 Ga0495685_014071 3300047447 Bacteria 2715
167 Ga0495685_018008 3300047447 Bacteria 2421
168 Ga0495685_060300 3300047447 Bacteria 1279
169 Ga0495681_0000495 3300047470 Bacteria 30163
170 Ga0495684_0017180 3300047471 Bacteria 5570
171 Ga0495684_0039842 3300047471 Bacteria 3602
172 Ga0495686_0014557 3300047472 Bacteria 5410
173 Ga0495686_0062749 3300047472 Bacteria 2304
174 Ga0495593_0001380 3300047673 Bacteria 14207
175 Ga0495593_0032391 3300047673 Bacteria 2850
176 Ga0495614_0004894 3300048089 Bacteria 6041
177 Ga0495614_0049445 3300048089 Bacteria 1802
178 Ga0496100_0084705 3300048903 Bacteria 2149
179 Ga0496101_0016961 3300048904 Bacteria 4931
180 Ga0496102_0044643 3300048905 Bacteria 4023
181 Ga0496104_0119363 3300048907 Bacteria 2532
182 Ga0496105_0056878 3300048908 Bacteria 3229
183 Ga0496114_0103671 3300048917 Bacteria 2431
184 Ga0496115_0007400 3300048918 Bacteria 8077
185 Ga0501032_0029286 3300049569 Bacteria 3779
186 Ga0501032_0037309 3300049569 Bacteria 3314
187 Ga0501033_0001598 3300049570 Bacteria 19914
188 Ga0501033_0009599 3300049570 Bacteria 7446
189 Ga0501033_0130662 3300049570 Bacteria 1819
190 Ga0501034_0018694 3300049571 Bacteria 7102
191 Ga0501034_0041425 3300049571 Bacteria 4659
192 Ga0501034_0108268 3300049571 Bacteria 2770
193 Ga0501034_0410402 3300049571 Bacteria 1276
194 Ga0501036_0003500 3300049572 Bacteria 12552
195 Ga0501036_0182201 3300049572 Bacteria 1768
196 Ga0501036_0285836 3300049572 Bacteria 1380
197 Ga0501037_0037011 3300049573 Bacteria 3596
198 Ga0501037_0129654 3300049573 Bacteria 1809
199 Ga0501038_0002915 3300049574 Bacteria 15942
200 Ga0501038_0008656 3300049574 Bacteria 9346
201 Ga0501038_0154788 3300049574 Bacteria 1867
202 Ga0501039_0016397 3300049575 Bacteria 5675
203 Ga0501039_0111825 3300049575 Bacteria 2135
204 Ga0501042_0042994 3300049578 Bacteria 3216
205 Ga0501043_0017251 3300049579 Bacteria 5663
206 Ga0501046_0022780 3300049580 Bacteria 5157
207 Ga0501047_0014622 3300049581 Bacteria 7468
208 Ga0501047_0095273 3300049581 Bacteria 2855
209 Ga0501047_0167788 3300049581 Bacteria 2065
210 Ga0501047_0184108 3300049581 Bacteria 1954
211 Ga0501048_0029777 3300049582 Bacteria 3954
212 Ga0501048_0235782 3300049582 Bacteria 1298
213 Ga0501070_0019840 3300049586 Bacteria 5637
214 Ga0501035_0010463 3300049822 Bacteria 8597
215 Ga0501035_0011475 3300049822 Bacteria 8213
216 Ga0501035_0019745 3300049822 Bacteria 6191
217 Ga0501035_0033358 3300049822 Bacteria 4682
218 Ga0501035_0075132 3300049822 Bacteria 2989
219 Ga0501044_0017189 3300049823 Bacteria 7761
220 Ga0501044_0018007 3300049823 Bacteria 7573
221 Ga0501044_0048482 3300049823 Bacteria 4387
222 Ga0501044_0068433 3300049823 Bacteria 3616
223 Ga0501045_0332397 3300049824 Bacteria 1131
224 nmdc:mga03n38_17487_c1 3300050490 Bacteria 2809
225 nmdc:mga07m45_102235_c1 3300050496 Bacteria 1646
226 nmdc:mga05p37_27055_c1 3300050507 Bacteria 6981
227 nmdc:mga09592_239_c1 3300050508 Bacteria 39950
228 nmdc:mga0qj67_9877_c1 3300050509 Bacteria 7115
229 nmdc:mga06r32_167_c1 3300050510 Bacteria 51343
230 nmdc:mga0a205_31940_c1 3300050515 Bacteria 5046
231 Ga0495601_0043551 3300053077 Bacteria 2819
232 Ga0495619_0064276 3300053085 Bacteria 2446
233 Ga0500644_0006163 3300053088 Bacteria 3060
234 Ga0500640_003299 3300053095 Bacteria 5600
235 Ga0500560_026776 3300053107 Bacteria 1706
236 Ga0500560_032833 3300053107 Bacteria 1582
237 Ga0500574_032646 3300053141 Bacteria 1411
238 Ga0500624_001705 3300053157 Bacteria 3258
239 Ga0466962_0001696 3300061719 Bacteria 10343
240 Ga0466962_0003163 3300061719 Bacteria 7823
241 Ga0466962_0009300 3300061719 Bacteria 4708
242 2644436249 2643221678 Bacteria 9540101
243 2547407891 2547132111 Bacteria 8013147
244 2585304962 2582581313 Bacteria 10042643
245 2585318876 2582581314 Bacteria 11452267
246 2644018810 2643221601 Bacteria 7493239
247 2644179945 2643221631 Bacteria 8168043
248 2644269132 2643221647 Bacteria 10741251
249 2644385284 2643221670 Bacteria 6497041
250 2644625880 2643221714 Bacteria 9015452
251 2784587766 2784132148 Bacteria 8627943
252 2785368460 2784746768 Bacteria 10036182
253 2786669466 2786546132 Bacteria 10419719
254 2808841141 2808606359 Bacteria 9866990
255 2808919652 2808606375 Bacteria 9466072
256 2809231347 2808606448 Bacteria 8656184
257 2811848174 2808606982 Bacteria 7791042
258 2812359106 2811994879 Bacteria 9313447
259 2819693756 2818991463 Bacteria 7948711
260 2862182594 2862178590 Bacteria 8583590
261 2862288268 2862281513 Bacteria 9621493
262 2862296902 2862290372 Bacteria 7471434
263 2867436599 2867428634 Bacteria 9590268
264 2877682072 2877676314 Bacteria 9512378
265 2912721033 2912715099 Bacteria 9460473
266 2912725117 2912723979 Bacteria 8557534
267 2918503717 2918501144 Bacteria 8668083
268 2919468545 2919468124 Bacteria 9133025
269 2946066771 2946064051 Bacteria 8957905
270 2946075106 2946072368 Bacteria 8999607
271 2947230450 2947224130 Bacteria 9938529
272 2954387198 2954380949 Bacteria 10050426
273 2954675955 2954673503 Bacteria 9685905
274 2954688211 2954682443 Bacteria 9862841
275 2954698033 2954691527 Bacteria 10720516
276 2954704182 2954701450 Bacteria 10834262
277 2954717142 2954711539 Bacteria 10867210
278 2954727110 2954721474 Bacteria 10456478
279 2954734691 2954731030 Bacteria 10243860
280 2954746015 2954740390 Bacteria 10229294
281 2954753578 2954749733 Bacteria 10366972
282 2954764985 2954759201 Bacteria 9358192
283 2966603372 2966598605 Bacteria 7676064
284 2997456458 2997451912 Bacteria 8492419
285 3006395645 3006393351 Bacteria 6615579
286 3006488352 3006486233 Bacteria 8157040
287 8023628188 8023623736 Bacteria 8593882
288 8056673354 8056667051 Bacteria 6953971
289 8056836823 8056829672 Bacteria 9045328
290 JGI24739J22299_10013950
291 JGI24737J22298_10022633
292 rootH1_10070781
293 rootH1_10096266
294 rootL2_10058260
295 Ga0006562J51391_1118238
296 Ga0006562J51391_1118240
297 Ga0070711_100046049
298 Ga0070698_100500376
299 Ga0068856_100159604
300 Ga0081455_10008369
301 Ga0081455_10030432
302 Ga0075368_10040864
303 Ga0075363_100005435
304 Ga0075363_100019846
305 Ga0075370_10172104
306 Ga0075433_10064750
307 Ga0114129_10149568
308 Ga0105243_10350710
309 Ga0157369_10172609
310 Ga0183367_1009
311 Ga0209758_1005749
312 Ga0207426_1001250
313 Ga0207426_1002287
314 Ga0207647_10085334
315 Ga0207709_10208918
316 Ga0209813_10027626
317 Ga0307517_10009378
318 Ga0307515_10000694
319 Ga0307515_10151149
320 Ga0307511_10012485
321 Ga0307511_10028525
322 Ga0307511_10076367
323 Ga0307512_10010397
324 Ga0307512_10098130
325 Ga0307512_10108719
326 Ga0307512_10191724
327 Ga0307513_10080897
328 Ga0307509_10022015
329 Ga0307509_10075812
330 Ga0307509_10082604
331 Ga0307508_10014780
332 Ga0307508_10027655
333 Ga0307508_10033730
334 Ga0307508_10046407
335 Ga0307514_10053597
336 Ga0307516_10004212
337 Ga0307516_10032251
338 Ga0307516_10414228
339 Ga0307518_10021072
340 Ga0307518_10059753
341 Ga0307518_10193931
342 Ga0307507_10135148
343 Ga0307507_10160668
344 Ga0307510_10016705
345 Ga0307510_10124933
346 Ga0395898_0006002
347 Ga0395898_0172546
348 Ga0451853_0839226
349 Ga0439449_0040039
350 Ga0450903_000924
351 Ga0439458_0000308
352 Ga0439458_0010206
353 Ga0450901_007009
354 Ga0466969_0031308
355 Ga0466969_0048073
356 Ga0466972_0002658
357 Ga0466972_0004831
358 Ga0466972_0011113
359 Ga0466972_0088342
360 Ga0466965_0001474
361 Ga0466965_0034678
362 Ga0466965_0075029
363 Ga0466965_0125303
364 Ga0466966_0004025
365 Ga0466961_0019001
366 Ga0466961_0033379
367 Ga0466961_0215191
368 Ga0466963_0000228
369 Ga0466963_0000601
370 Ga0466963_0095347
371 Ga0466964_0003679
372 Ga0466971_0000104
373 Ga0466971_0007664
374 Ga0466968_0006968
375 Ga0466970_0000447
376 Ga0466957_0000135
377 Ga0466960_0005120
378 Ga0466959_0000505
379 Ga0466959_0033788
380 Ga0466958_0000091
381 Ga0466967_0059528
382 Ga0466967_0100078
383 Ga0495592_0000576
384 Ga0495592_0003645
385 Ga0495603_0002843
386 Ga0495603_0016942
387 Ga0495629_0005372
388 Ga0495629_0007621
389 Ga0495629_0042610
390 Ga0495629_0195086
391 Ga0495651_0001088
392 Ga0495653_0028428
393 Ga0495580_0013694
394 Ga0495662_0000627
395 Ga0495662_0001431
396 Ga0495664_0000897
397 Ga0495664_0046057
398 Ga0495594_0108491
399 Ga0495594_0174946
400 Ga0495583_0021256
401 Ga0495608_0002343
402 Ga0495618_0009311
403 Ga0495628_0012146
404 Ga0495628_0055207
405 Ga0495630_0033761
406 Ga0495630_0081218
407 Ga0495631_0049166
408 Ga0495666_0012164
409 Ga0495652_0007059
410 Ga0495652_0062249
411 Ga0495640_0014936
412 Ga0495640_0019524
413 Ga0495586_0004758
414 Ga0495645_0002099
415 Ga0495645_0005277
416 Ga0495645_0016564
417 Ga0495622_0004972
418 Ga0495667_0013387
419 Ga0495634_0001729
420 Ga0495611_0038741
421 Ga0495625_0003462
422 Ga0495635_0008296
423 Ga0495588_0001494
424 Ga0495588_0044449
425 Ga0495657_0010913
426 Ga0495657_0021309
427 Ga0495623_0177997
428 Ga0495646_0036089
429 Ga0495646_0111805
430 Ga0495613_0001741
431 Ga0495613_0002310
432 Ga0495613_0003083
433 Ga0495613_0081551
434 Ga0495624_0116347
435 Ga0495671_0006456
436 Ga0495600_0012640
437 Ga0495600_0292234
438 Ga0495581_0010649
439 Ga0495581_0139866
440 Ga0495604_0001083
441 Ga0495604_0004510
442 Ga0495636_0003141
443 Ga0495636_0038158
444 Ga0495636_0095432
445 Ga0495674_0027286
446 Ga0495674_0148023
447 Ga0495676_0000862
448 Ga0495676_0031933
449 Ga0495676_0189034
450 Ga0495683_0030489
451 Ga0495687_000383
452 Ga0495675_0017308
453 Ga0495685_004747
454 Ga0495685_007033
455 Ga0495685_014071
456 Ga0495685_018008
457 Ga0495685_060300
458 Ga0495681_0000495
459 Ga0495684_0017180
460 Ga0495684_0039842
461 Ga0495686_0014557
462 Ga0495686_0062749
463 Ga0495593_0001380
464 Ga0495593_0032391
465 Ga0495614_0004894
466 Ga0495614_0049445
467 Ga0496100_0084705
468 Ga0496101_0016961
469 Ga0496102_0044643
470 Ga0496104_0119363
471 Ga0496105_0056878
472 Ga0496114_0103671
473 Ga0496115_0007400
474 Ga0501032_0029286
475 Ga0501032_0037309
476 Ga0501033_0001598
477 Ga0501033_0009599
478 Ga0501033_0130662
479 Ga0501034_0018694
480 Ga0501034_0041425
481 Ga0501034_0108268
482 Ga0501034_0410402
483 Ga0501036_0003500
484 Ga0501036_0182201
485 Ga0501036_0285836
486 Ga0501037_0037011
487 Ga0501037_0129654
488 Ga0501038_0002915
489 Ga0501038_0008656
490 Ga0501038_0154788
491 Ga0501039_0016397
492 Ga0501039_0111825
493 Ga0501042_0042994
494 Ga0501043_0017251
495 Ga0501046_0022780
496 Ga0501047_0014622
497 Ga0501047_0095273
498 Ga0501047_0167788
499 Ga0501047_0184108
500 Ga0501048_0029777
501 Ga0501048_0235782
502 Ga0501070_0019840
503 Ga0501035_0010463
504 Ga0501035_0011475
505 Ga0501035_0019745
506 Ga0501035_0033358
507 Ga0501035_0075132
508 Ga0501044_0017189
509 Ga0501044_0018007
510 Ga0501044_0048482
511 Ga0501044_0068433
512 Ga0501045_0332397
513 nmdc:mga03n38_17487_c1
514 nmdc:mga07m45_102235_c1
515 nmdc:mga05p37_27055_c1
516 nmdc:mga09592_239_c1
517 nmdc:mga0qj67_9877_c1
518 nmdc:mga06r32_167_c1
519 nmdc:mga0a205_31940_c1
520 Ga0495601_0043551
521 Ga0495619_0064276
522 Ga0500644_0006163
523 Ga0500640_003299
524 Ga0500560_026776
525 Ga0500560_032833
526 Ga0500574_032646
527 Ga0500624_001705
528 Ga0466962_0001696
529 Ga0466962_0003163
530 Ga0466962_0009300
531 2644436249
532 2547407891
533 2585304962
534 2585318876
535 2644018810
536 2644179945
537 2644269132
538 2644385284
539 2644625880
540 2784587766
541 2785368460
542 2786669466
543 2808841141
544 2808919652
545 2809231347
546 2811848174
547 2812359106
548 2819693756
549 2862182594
550 2862288268
551 2862296902
552 2867436599
553 2877682072
554 2912721033
555 2912725117
556 2918503717
557 2919468545
558 2946066771
559 2946075106
560 2947230450
561 2954387198
562 2954675955
563 2954688211
564 2954698033
565 2954704182
566 2954717142
567 2954727110
568 2954734691
569 2954746015
570 2954753578
571 2954764985
572 2966603372
573 2997456458
574 3006395645
575 3006488352
576 8023628188
577 8056673354
578 8056836823

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13560

HTH_31

Helix-turn-helix domain

42

121

0.98

PF17765

MLTR_LBD

MmyB-like transcription regulator ligand binding domain

139

304

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ewc-assembly2.cif.gz_C mycobacterium tuberculosis higa2 (form i) 0.8568 55 94
1utx-assembly1.cif.gz_B regulation of cytolysin expression by enterococcus faecalis: role of cylr2 0.8434 30 97
4yba-assembly1.cif.gz_A the structure of the c.kpn2i controller protein 0.8426 27 95
3vk0-assembly1.cif.gz_A crystal structure of hypothetical transcription factor nhtf from neisseria 0.8172 20 101
1y7y-assembly1.cif.gz_B high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila 0.8118 21 101
ID Description Score Start End Superfamily
1zz9B01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8439 23 101 1.10.260.40
4ybaA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8426 27 95 1.10.260.40
2ofyB01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8254 19 102 1.10.260.40
1y7yA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8243 18 101 1.10.260.40
3vk0A00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8172 20 101 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A402AQT9-F1-model_v4 HTH cro/C1-type domain-containing protein 0.9856 19 114 GO:0003677
AF-A0A3E0CZ41-F1-model_v4 deleted 0.9809 19 109
AF-A0A0N1NWM1-F1-model_v4 deleted 0.9805 123 298
AF-A0A2W4REA5-F1-model_v4 Transcriptional regulator 0.9735 20 107 GO:0003677
AF-A0A7K2M030-F1-model_v4 Helix-turn-helix domain-containing protein 0.9626 22 110 GO:0003677

Map