F389362

General Info

Members Datasets Scaffolds Average Seq Length
289 184 578 434

Family's Representative Sequence

Representative Sequence 3300046472|Ga0495580_0061888|Ga0495580_0061888_123_1544
Length 473
Sequence LPDSLFGDEFVGTSAYTLENISQLQSADGTLPRRLGLASATAAVAGESIAVGIFLTPAGMAKSLGSPFWLLLVWLVVGALAVCGALCYGELAARFPRDGGIYVYLLETGGRRIAFLYGWMCLLVLDPGLTAALAVGLASYTGYIFPSSALAAKVVAIGVIWSLCILNVFSIRVGAGILRWTTWLKLGVLAAMVVWAFAFRLGSLSNFVPFVAQHPGSLPLGPALGAAMVGGFFSFGGWWDVSKIAGEVRDPGRTLPRAMLLGVLIVTVVYILVSAAFVYLLPLSQVTSDQAFVAQAGAVLFGRAGGMVFAAIVVVCVLSSLAAFIMSAPRVYYAMAKDGLFVQAMARTHPRFGTPANAILLQGSIATILVVIGSFQQIIAYFIFVAILFLALAGAGLFAARKRSQGIQPVFLTPAYPVPAIVFLILMSALLVLLVLHSPREALLGTAVVAAGLPVYSVFQRRGAAANIAGAKF

Samples

Sample ID Description Type Environment
1 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
57 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
73 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
79 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
84 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
85 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
86 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
89 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
90 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
91 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
138 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
142 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
143 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
144 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
145 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
146 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
147 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
148 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
149 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
150 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
151 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
152 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
153 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
154 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
155 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
156 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
157 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
158 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
159 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
160 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
161 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
162 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
168 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
169 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
170 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
171 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
172 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
173 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
174 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.73
Rhizosphere 96.54
Stem 0
Stem Tuber 0
Unclassified 16.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495580_0061888 3300046472 Bacteria 2627
2 CNAas_1000277 3300000532 Unclassified 4935
3 JGI24751J29686_10000108 3300002459 Bacteria 44377
4 JGI25406J46586_10006760 3300003203 Bacteria 5270
5 Ga0065714_10064440 3300005288 Bacteria 109986
6 Ga0065704_10002192 3300005289 Bacteria 8075
7 Ga0065712_10000120 3300005290 Bacteria 105792
8 Ga0065715_10004356 3300005293 Bacteria 3575
9 Ga0065715_10088971 3300005293 Bacteria 18989
10 Ga0070676_10029297 3300005328 Bacteria 3131
11 Ga0070676_10055774 3300005328 Bacteria 2333
12 Ga0070690_100019331 3300005330 Bacteria 4132
13 Ga0068869_100021148 3300005334 Unclassified 4472
14 Ga0068869_100044522 3300005334 Bacteria 3192
15 Ga0068869_100070697 3300005334 Bacteria 2583
16 Ga0070666_10109960 3300005335 Bacteria 1905
17 Ga0070682_100000098 3300005337 Bacteria 78492
18 Ga0070682_100018089 3300005337 Bacteria 4114
19 Ga0068868_100010892 3300005338 Bacteria 6600
20 Ga0068868_100023427 3300005338 Bacteria 4673
21 Ga0070689_100137949 3300005340 Bacteria 1959
22 Ga0070689_100147666 3300005340 Unclassified 1895
23 Ga0070669_100000118 3300005353 Bacteria 73256
24 Ga0070669_100015168 3300005353 Bacteria 5488
25 Ga0070669_100019892 3300005353 Bacteria 4796
26 Ga0070669_100029618 3300005353 Unclassified 3947
27 Ga0070675_100004402 3300005354 Bacteria 10744
28 Ga0070688_100011443 3300005365 Bacteria 4929
29 Ga0070659_100015324 3300005366 Bacteria 5740
30 Ga0070714_100137448 3300005435 Bacteria 2190
31 Ga0070713_100004707 3300005436 Bacteria 9218
32 Ga0070701_10013906 3300005438 Bacteria 3674
33 Ga0070705_100034489 3300005440 Bacteria 2830
34 Ga0070700_100096734 3300005441 Bacteria 1938
35 Ga0070694_100049856 3300005444 Bacteria 2820
36 Ga0070694_100178569 3300005444 Unclassified 1569
37 Ga0070694_100240114 3300005444 Bacteria 1366
38 Ga0070708_100008128 3300005445 Bacteria 8413
39 Ga0070708_100029117 3300005445 Unclassified 4761
40 Ga0070663_100119544 3300005455 Bacteria 1989
41 Ga0070662_100008318 3300005457 Bacteria 6762
42 Ga0070681_10000628 3300005458 Bacteria 28955
43 Ga0070681_10013220 3300005458 Bacteria 8202
44 Ga0070681_10056908 3300005458 Bacteria 3890
45 Ga0068867_100011034 3300005459 Bacteria 6371
46 Ga0070685_10041692 3300005466 Bacteria 2617
47 Ga0070706_100000023 3300005467 Bacteria 159966
48 Ga0070706_100001937 3300005467 Bacteria 21337
49 Ga0070706_100028804 3300005467 Bacteria 5115
50 Ga0070707_100141149 3300005468 Bacteria 2344
51 Ga0070698_100009401 3300005471 Bacteria 10475
52 Ga0070698_100023030 3300005471 Bacteria 6512
53 Ga0070699_100000933 3300005518 Bacteria 27278
54 Ga0070699_100012940 3300005518 Bacteria 7191
55 Ga0070679_100127929 3300005530 Bacteria 2522
56 Ga0070697_100000433 3300005536 Bacteria 32143
57 Ga0070697_100152463 3300005536 Bacteria 1948
58 Ga0070672_100039891 3300005543 Bacteria 3599
59 Ga0070686_100044742 3300005544 Unclassified 2785
60 Ga0070695_100132903 3300005545 Unclassified 1717
61 Ga0070696_100054927 3300005546 Unclassified 2777
62 Ga0070693_100008318 3300005547 Bacteria 5107
63 Ga0070693_100011781 3300005547 Bacteria 4410
64 Ga0070693_100101718 3300005547 Bacteria 1752
65 Ga0070704_100004337 3300005549 Bacteria 8196
66 Ga0070704_100010849 3300005549 Bacteria 5558
67 Ga0068854_100090503 3300005578 Unclassified 2275
68 Ga0068854_100202744 3300005578 Unclassified 1560
69 Ga0068856_100016465 3300005614 Bacteria 7156
70 Ga0068856_100329287 3300005614 Bacteria 1545
71 Ga0070702_100035118 3300005615 Bacteria 2768
72 Ga0068852_100304907 3300005616 Bacteria 1542
73 Ga0068859_100107200 3300005617 Bacteria 2854
74 Ga0068859_100141956 3300005617 Unclassified 2475
75 Ga0068864_100052874 3300005618 Bacteria 3502
76 Ga0068864_100170039 3300005618 Bacteria 1987
77 Ga0068864_100211973 3300005618 Bacteria 1784
78 Ga0068861_100003087 3300005719 Bacteria 11004
79 Ga0068861_100051599 3300005719 Bacteria 3123
80 Ga0068851_10028601 3300005834 Bacteria 2754
81 Ga0068870_10074113 3300005840 Bacteria 1864
82 Ga0068858_100223116 3300005842 Bacteria 1785
83 Ga0068862_100011125 3300005844 Bacteria 7429
84 Ga0068862_100093542 3300005844 Bacteria 2621
85 Ga0068862_100096849 3300005844 Bacteria 2576
86 Ga0081539_10000360 3300005985 Bacteria 100156
87 Ga0081539_10000372 3300005985 Bacteria 98410
88 Ga0081539_10000500 3300005985 Bacteria 82137
89 Ga0070716_100000481 3300006173 Bacteria 16505
90 Ga0070712_100002072 3300006175 Bacteria 12304
91 Ga0070712_100004882 3300006175 Bacteria 8293
92 Ga0097621_100000517 3300006237 Bacteria 27112
93 Ga0097621_100002090 3300006237 Bacteria 13681
94 Ga0068871_100005819 3300006358 Bacteria 8665
95 Ga0075428_100155068 3300006844 Bacteria 2488
96 Ga0075430_100048386 3300006846 Unclassified 3590
97 Ga0075433_10277138 3300006852 Unclassified 1486
98 Ga0075434_100002652 3300006871 Bacteria 15792
99 Ga0075434_100032535 3300006871 Bacteria 5142
100 Ga0075434_100056629 3300006871 Bacteria 3896
101 Ga0075434_100263301 3300006871 Bacteria 1743
102 Ga0075429_100157518 3300006880 Bacteria 1988
103 Ga0068865_100052786 3300006881 Bacteria 2819
104 Ga0075436_100000286 3300006914 Bacteria 32073
105 Ga0075436_100017576 3300006914 Bacteria 4895
106 Ga0097620_100007767 3300006931 Bacteria 10891
107 Ga0097620_100107203 3300006931 Bacteria 2854
108 Ga0097620_100141953 3300006931 Unclassified 2475
109 Ga0075435_100001576 3300007076 Bacteria 14704
110 Ga0075435_100102697 3300007076 Bacteria 2370
111 Ga0075435_100118142 3300007076 Bacteria 2210
112 Ga0105240_10117748 3300009093 Unclassified 3202
113 Ga0111539_10022879 3300009094 Bacteria 7675
114 Ga0111539_10024032 3300009094 Bacteria 7486
115 Ga0111539_10039419 3300009094 Bacteria 5694
116 Ga0105245_10017441 3300009098 Bacteria 6263
117 Ga0105247_10116273 3300009101 Bacteria 1727
118 Ga0114129_10187279 3300009147 Bacteria 2812
119 Ga0114129_10336554 3300009147 Bacteria 2003
120 Ga0105243_10052667 3300009148 Bacteria 3225
121 Ga0105243_10091113 3300009148 Unclassified 2510
122 Ga0105243_10194661 3300009148 Bacteria 1773
123 Ga0105242_10090432 3300009176 Bacteria 2575
124 Ga0105248_10015269 3300009177 Bacteria 8467
125 Ga0105248_10107336 3300009177 Unclassified 3148
126 Ga0105237_10000835 3300009545 Bacteria 42094
127 Ga0105237_10074168 3300009545 Unclassified 3394
128 Ga0105238_10002572 3300009551 Bacteria 18107
129 Ga0105238_10008401 3300009551 Bacteria 10333
130 Ga0105249_10083071 3300009553 Unclassified 2981
131 Ga0105249_10148801 3300009553 Bacteria 2252
132 Ga0105239_10083301 3300010375 Unclassified 3522
133 Ga0157373_10028697 3300013100 Bacteria 4013
134 Ga0157371_10070370 3300013102 Bacteria 2477
135 Ga0157369_10007966 3300013105 Bacteria 12173
136 Ga0157374_10091291 3300013296 Unclassified 2904
137 Ga0157378_10000144 3300013297 Bacteria 67006
138 Ga0157378_10045755 3300013297 Unclassified 3890
139 Ga0157372_10003405 3300013307 Bacteria 17169
140 Ga0157372_10076036 3300013307 Unclassified 3791
141 Ga0157372_10142070 3300013307 Bacteria 2767
142 Ga0157375_10085709 3300013308 Unclassified 3200
143 Ga0163163_10002497 3300014325 Bacteria 15554
144 Ga0163163_10068175 3300014325 Bacteria 3539
145 Ga0163163_10169324 3300014325 Unclassified 2231
146 Ga0157376_10048490 3300014969 Unclassified 3512
147 Ga0213876_10000006 3300021384 Bacteria 700803
148 Ga0213876_10006038 3300021384 Bacteria 6620
149 Ga0207656_10020456 3300025321 Bacteria 2631
150 Ga0207692_10009370 3300025898 Bacteria 4086
151 Ga0207642_10022322 3300025899 Bacteria 2508
152 Ga0207647_10006125 3300025904 Bacteria 8765
153 Ga0207645_10019092 3300025907 Bacteria 4501
154 Ga0207643_10004598 3300025908 Bacteria 7409
155 Ga0207684_10000329 3300025910 Bacteria 66627
156 Ga0207684_10040162 3300025910 Bacteria 3967
157 Ga0207707_10004425 3300025912 Bacteria 12381
158 Ga0207695_10025485 3300025913 Bacteria 6619
159 Ga0207695_10087081 3300025913 Bacteria 3147
160 Ga0207671_10003597 3300025914 Bacteria 15322
161 Ga0207693_10000777 3300025915 Bacteria 28620
162 Ga0207693_10008096 3300025915 Bacteria 8621
163 Ga0207693_10022396 3300025915 Bacteria 5021
164 Ga0207660_10172167 3300025917 Unclassified 1676
165 Ga0207662_10001418 3300025918 Bacteria 11616
166 Ga0207657_10007066 3300025919 Bacteria 11534
167 Ga0207652_10101783 3300025921 Bacteria 2538
168 Ga0207646_10062654 3300025922 Bacteria 3320
169 Ga0207681_10000098 3300025923 Bacteria 73269
170 Ga0207681_10029882 3300025923 Bacteria 3547
171 Ga0207694_10007563 3300025924 Bacteria 8236
172 Ga0207694_10154098 3300025924 Unclassified 1852
173 Ga0207650_10000007 3300025925 Bacteria 530810
174 Ga0207650_10053358 3300025925 Bacteria 2996
175 Ga0207687_10022097 3300025927 Unclassified 4232
176 Ga0207687_10027314 3300025927 Bacteria 3829
177 Ga0207700_10015552 3300025928 Bacteria 5023
178 Ga0207690_10084241 3300025932 Unclassified 2228
179 Ga0207706_10001122 3300025933 Bacteria 27226
180 Ga0207686_10023623 3300025934 Bacteria 3553
181 Ga0207686_10056014 3300025934 Unclassified 2476
182 Ga0207686_10075894 3300025934 Bacteria 2177
183 Ga0207709_10024022 3300025935 Bacteria 3476
184 Ga0207670_10000558 3300025936 Bacteria 20611
185 Ga0207670_10087290 3300025936 Bacteria 2197
186 Ga0207665_10003746 3300025939 Bacteria 10156
187 Ga0207665_10063767 3300025939 Bacteria 2503
188 Ga0207691_10027290 3300025940 Bacteria 5355
189 Ga0207711_10002524 3300025941 Bacteria 16302
190 Ga0207711_10080244 3300025941 Unclassified 2849
191 Ga0207689_10014786 3300025942 Bacteria 6626
192 Ga0207689_10048755 3300025942 Bacteria 3494
193 Ga0207689_10060987 3300025942 Bacteria 3101
194 Ga0207689_10064949 3300025942 Bacteria 3002
195 Ga0207689_10079085 3300025942 Unclassified 2702
196 Ga0207689_10089913 3300025942 Bacteria 2522
197 Ga0207661_10078251 3300025944 Unclassified 2722
198 Ga0207651_10187262 3300025960 Unclassified 1648
199 Ga0207712_10044315 3300025961 Bacteria 3074
200 Ga0207640_10143611 3300025981 Unclassified 1743
201 Ga0207677_10029404 3300026023 Bacteria 3491
202 Ga0207703_10018763 3300026035 Bacteria 5403
203 Ga0207703_10093032 3300026035 Unclassified 2539
204 Ga0207639_10086238 3300026041 Bacteria 2499
205 Ga0207678_10000950 3300026067 Bacteria 26463
206 Ga0207708_10000069 3300026075 Bacteria 82187
207 Ga0207708_10016327 3300026075 Bacteria 5581
208 Ga0207702_10037002 3300026078 Bacteria 4083
209 Ga0207641_10034220 3300026088 Bacteria 4225
210 Ga0207641_10348928 3300026088 Unclassified 1410
211 Ga0207648_10012845 3300026089 Bacteria 7821
212 Ga0207648_10015660 3300026089 Bacteria 6964
213 Ga0207676_10016365 3300026095 Bacteria 5368
214 Ga0207676_10124987 3300026095 Bacteria 2177
215 Ga0207676_10184269 3300026095 Bacteria 1831
216 Ga0207674_10103789 3300026116 Unclassified 2822
217 Ga0207674_10115130 3300026116 Bacteria 2660
218 Ga0207675_100006411 3300026118 Bacteria 11145
219 Ga0207675_100008030 3300026118 Bacteria 9943
220 Ga0207675_100053844 3300026118 Bacteria 3754
221 Ga0207698_10113116 3300026142 Unclassified 2280
222 Ga0207428_10023133 3300027907 Bacteria 5228
223 Ga0268266_10031488 3300028379 Bacteria 4505
224 Ga0268265_10061189 3300028380 Bacteria 2889
225 Ga0268264_10028827 3300028381 Bacteria 4544
226 Ga0268264_10095750 3300028381 Bacteria 2569
227 Ga0307513_10012632 3300031456 Bacteria 10408
228 Ga0307408_100039537 3300031548 Bacteria 3335
229 Ga0307408_100186939 3300031548 Bacteria 1666
230 Ga0307405_10028451 3300031731 Bacteria 3255
231 Ga0307413_10022513 3300031824 Bacteria 3398
232 Ga0307406_10009237 3300031901 Bacteria 5523
233 Ga0307409_100022252 3300031995 Bacteria 4366
234 Ga0307409_100063277 3300031995 Bacteria 2901
235 Ga0307416_100028414 3300032002 Bacteria 4158
236 Ga0307414_10005762 3300032004 Bacteria 6846
237 Ga0307414_10090334 3300032004 Bacteria 2273
238 Ga0307415_100016151 3300032126 Bacteria 4441
239 Ga0307415_100095327 3300032126 Bacteria 2166
240 Ga0373951_0000661 3300035091 Bacteria 9474
241 Ga0373936_0037532 3300035113 Unclassified 1935
242 Ga0373927_0044070 3300035695 Bacteria 2887
243 Ga0373947_0004334 3300035725 Bacteria 8334
244 Ga0373925_0001058 3300037068 Bacteria 24873
245 Ga0242422_00535 3300038699 Unclassified 2452
246 Ga0436365_0695157 3300039437 Bacteria 511493
247 Ga0436365_1466924 3300039437 Bacteria 9345
248 Ga0450889_003512 3300042144 Unclassified 1548
249 Ga0451576_0471295 3300045051 Unclassified 1319
250 Ga0495580_0001468 3300046472 Bacteria 20680
251 Ga0495580_0008839 3300046472 Bacteria 7974
252 Ga0495582_0000979 3300046473 Bacteria 15974
253 Ga0495663_0008360 3300046525 Bacteria 2866
254 Ga0495598_0002214 3300046537 Bacteria 3993
255 Ga0495621_0001453 3300046539 Bacteria 6142
256 Ga0496104_0330728 3300048907 Bacteria 1437
257 Ga0496112_0075446 3300048915 Bacteria 3335
258 Ga0496112_0075791 3300048915 Bacteria 3326
259 Ga0496112_0323126 3300048915 Bacteria 1487
260 Ga0496112_0326011 3300048915 Bacteria 1480
261 Ga0501296_001531 3300049519 Bacteria 2348
262 Ga0501038_0001912 3300049574 Bacteria 19263
263 Ga0501075_0124820 3300049591 Bacteria 1960
264 Ga0501202_015265 3300049652 Unclassified 1478
265 Ga0501216_008542 3300049660 Unclassified 1615
266 Ga0501224_002076 3300049664 Bacteria 2712
267 Ga0501227_003649 3300049665 Bacteria 3335
268 Ga0501235_022193 3300049669 Bacteria 1411
269 Ga0501225_0003253 3300049705 Bacteria 4959
270 Ga0501225_0008343 3300049705 Bacteria 2974
271 Ga0501234_008104 3300049707 Bacteria 1642
272 Ga0501045_0054048 3300049824 Bacteria 2936
273 nmdc:mga05p37_315715_c1 3300050507 Bacteria 1851
274 nmdc:mga09592_19742_c1 3300050508 Bacteria 5535
275 nmdc:mga0qj67_105684_c1 3300050509 Bacteria 2271
276 nmdc:mga0qj67_78437_c1 3300050509 Bacteria 2644
277 nmdc:mga06r32_46702_c1 3300050510 Bacteria 4132
278 nmdc:mga08y16_183139_c1 3300050511 Bacteria 2174
279 nmdc:mga08y16_4047_c1 3300050511 Bacteria 15299
280 nmdc:mga08y16_97060_c1 3300050511 Bacteria 3069
281 nmdc:mga0n895_1742_c1 3300050512 Bacteria 16460
282 nmdc:mga0n895_209922_c1 3300050512 Bacteria 1977
283 nmdc:mga0rr50_33441_c1 3300050513 Bacteria 3673
284 nmdc:mga0rr50_4978_c1 3300050513 Bacteria 7869
285 nmdc:mga08x19_149836_c1 3300050514 Bacteria 1579
286 nmdc:mga08x19_23750_c1 3300050514 Bacteria 3805
287 nmdc:mga08x19_5845_c1 3300050514 Bacteria 7281
288 nmdc:mga0a205_114066_c1 3300050515 Bacteria 2601
289 nmdc:mga0a205_343987_c1 3300050515 Unclassified 1360
290 Ga0495580_0061888
291 CNAas_1000277
292 JGI24751J29686_10000108
293 JGI25406J46586_10006760
294 Ga0065714_10064440
295 Ga0065704_10002192
296 Ga0065712_10000120
297 Ga0065715_10004356
298 Ga0065715_10088971
299 Ga0070676_10029297
300 Ga0070676_10055774
301 Ga0070690_100019331
302 Ga0068869_100021148
303 Ga0068869_100044522
304 Ga0068869_100070697
305 Ga0070666_10109960
306 Ga0070682_100000098
307 Ga0070682_100018089
308 Ga0068868_100010892
309 Ga0068868_100023427
310 Ga0070689_100137949
311 Ga0070689_100147666
312 Ga0070669_100000118
313 Ga0070669_100015168
314 Ga0070669_100019892
315 Ga0070669_100029618
316 Ga0070675_100004402
317 Ga0070688_100011443
318 Ga0070659_100015324
319 Ga0070714_100137448
320 Ga0070713_100004707
321 Ga0070701_10013906
322 Ga0070705_100034489
323 Ga0070700_100096734
324 Ga0070694_100049856
325 Ga0070694_100178569
326 Ga0070694_100240114
327 Ga0070708_100008128
328 Ga0070708_100029117
329 Ga0070663_100119544
330 Ga0070662_100008318
331 Ga0070681_10000628
332 Ga0070681_10013220
333 Ga0070681_10056908
334 Ga0068867_100011034
335 Ga0070685_10041692
336 Ga0070706_100000023
337 Ga0070706_100001937
338 Ga0070706_100028804
339 Ga0070707_100141149
340 Ga0070698_100009401
341 Ga0070698_100023030
342 Ga0070699_100000933
343 Ga0070699_100012940
344 Ga0070679_100127929
345 Ga0070697_100000433
346 Ga0070697_100152463
347 Ga0070672_100039891
348 Ga0070686_100044742
349 Ga0070695_100132903
350 Ga0070696_100054927
351 Ga0070693_100008318
352 Ga0070693_100011781
353 Ga0070693_100101718
354 Ga0070704_100004337
355 Ga0070704_100010849
356 Ga0068854_100090503
357 Ga0068854_100202744
358 Ga0068856_100016465
359 Ga0068856_100329287
360 Ga0070702_100035118
361 Ga0068852_100304907
362 Ga0068859_100107200
363 Ga0068859_100141956
364 Ga0068864_100052874
365 Ga0068864_100170039
366 Ga0068864_100211973
367 Ga0068861_100003087
368 Ga0068861_100051599
369 Ga0068851_10028601
370 Ga0068870_10074113
371 Ga0068858_100223116
372 Ga0068862_100011125
373 Ga0068862_100093542
374 Ga0068862_100096849
375 Ga0081539_10000360
376 Ga0081539_10000372
377 Ga0081539_10000500
378 Ga0070716_100000481
379 Ga0070712_100002072
380 Ga0070712_100004882
381 Ga0097621_100000517
382 Ga0097621_100002090
383 Ga0068871_100005819
384 Ga0075428_100155068
385 Ga0075430_100048386
386 Ga0075433_10277138
387 Ga0075434_100002652
388 Ga0075434_100032535
389 Ga0075434_100056629
390 Ga0075434_100263301
391 Ga0075429_100157518
392 Ga0068865_100052786
393 Ga0075436_100000286
394 Ga0075436_100017576
395 Ga0097620_100007767
396 Ga0097620_100107203
397 Ga0097620_100141953
398 Ga0075435_100001576
399 Ga0075435_100102697
400 Ga0075435_100118142
401 Ga0105240_10117748
402 Ga0111539_10022879
403 Ga0111539_10024032
404 Ga0111539_10039419
405 Ga0105245_10017441
406 Ga0105247_10116273
407 Ga0114129_10187279
408 Ga0114129_10336554
409 Ga0105243_10052667
410 Ga0105243_10091113
411 Ga0105243_10194661
412 Ga0105242_10090432
413 Ga0105248_10015269
414 Ga0105248_10107336
415 Ga0105237_10000835
416 Ga0105237_10074168
417 Ga0105238_10002572
418 Ga0105238_10008401
419 Ga0105249_10083071
420 Ga0105249_10148801
421 Ga0105239_10083301
422 Ga0157373_10028697
423 Ga0157371_10070370
424 Ga0157369_10007966
425 Ga0157374_10091291
426 Ga0157378_10000144
427 Ga0157378_10045755
428 Ga0157372_10003405
429 Ga0157372_10076036
430 Ga0157372_10142070
431 Ga0157375_10085709
432 Ga0163163_10002497
433 Ga0163163_10068175
434 Ga0163163_10169324
435 Ga0157376_10048490
436 Ga0213876_10000006
437 Ga0213876_10006038
438 Ga0207656_10020456
439 Ga0207692_10009370
440 Ga0207642_10022322
441 Ga0207647_10006125
442 Ga0207645_10019092
443 Ga0207643_10004598
444 Ga0207684_10000329
445 Ga0207684_10040162
446 Ga0207707_10004425
447 Ga0207695_10025485
448 Ga0207695_10087081
449 Ga0207671_10003597
450 Ga0207693_10000777
451 Ga0207693_10008096
452 Ga0207693_10022396
453 Ga0207660_10172167
454 Ga0207662_10001418
455 Ga0207657_10007066
456 Ga0207652_10101783
457 Ga0207646_10062654
458 Ga0207681_10000098
459 Ga0207681_10029882
460 Ga0207694_10007563
461 Ga0207694_10154098
462 Ga0207650_10000007
463 Ga0207650_10053358
464 Ga0207687_10022097
465 Ga0207687_10027314
466 Ga0207700_10015552
467 Ga0207690_10084241
468 Ga0207706_10001122
469 Ga0207686_10023623
470 Ga0207686_10056014
471 Ga0207686_10075894
472 Ga0207709_10024022
473 Ga0207670_10000558
474 Ga0207670_10087290
475 Ga0207665_10003746
476 Ga0207665_10063767
477 Ga0207691_10027290
478 Ga0207711_10002524
479 Ga0207711_10080244
480 Ga0207689_10014786
481 Ga0207689_10048755
482 Ga0207689_10060987
483 Ga0207689_10064949
484 Ga0207689_10079085
485 Ga0207689_10089913
486 Ga0207661_10078251
487 Ga0207651_10187262
488 Ga0207712_10044315
489 Ga0207640_10143611
490 Ga0207677_10029404
491 Ga0207703_10018763
492 Ga0207703_10093032
493 Ga0207639_10086238
494 Ga0207678_10000950
495 Ga0207708_10000069
496 Ga0207708_10016327
497 Ga0207702_10037002
498 Ga0207641_10034220
499 Ga0207641_10348928
500 Ga0207648_10012845
501 Ga0207648_10015660
502 Ga0207676_10016365
503 Ga0207676_10124987
504 Ga0207676_10184269
505 Ga0207674_10103789
506 Ga0207674_10115130
507 Ga0207675_100006411
508 Ga0207675_100008030
509 Ga0207675_100053844
510 Ga0207698_10113116
511 Ga0207428_10023133
512 Ga0268266_10031488
513 Ga0268265_10061189
514 Ga0268264_10028827
515 Ga0268264_10095750
516 Ga0307513_10012632
517 Ga0307408_100039537
518 Ga0307408_100186939
519 Ga0307405_10028451
520 Ga0307413_10022513
521 Ga0307406_10009237
522 Ga0307409_100022252
523 Ga0307409_100063277
524 Ga0307416_100028414
525 Ga0307414_10005762
526 Ga0307414_10090334
527 Ga0307415_100016151
528 Ga0307415_100095327
529 Ga0373951_0000661
530 Ga0373936_0037532
531 Ga0373927_0044070
532 Ga0373947_0004334
533 Ga0373925_0001058
534 Ga0242422_00535
535 Ga0436365_0695157
536 Ga0436365_1466924
537 Ga0450889_003512
538 Ga0451576_0471295
539 Ga0495580_0001468
540 Ga0495580_0008839
541 Ga0495582_0000979
542 Ga0495663_0008360
543 Ga0495598_0002214
544 Ga0495621_0001453
545 Ga0496104_0330728
546 Ga0496112_0075446
547 Ga0496112_0075791
548 Ga0496112_0323126
549 Ga0496112_0326011
550 Ga0501296_001531
551 Ga0501038_0001912
552 Ga0501075_0124820
553 Ga0501202_015265
554 Ga0501216_008542
555 Ga0501224_002076
556 Ga0501227_003649
557 Ga0501235_022193
558 Ga0501225_0003253
559 Ga0501225_0008343
560 Ga0501234_008104
561 Ga0501045_0054048
562 nmdc:mga05p37_315715_c1
563 nmdc:mga09592_19742_c1
564 nmdc:mga0qj67_105684_c1
565 nmdc:mga0qj67_78437_c1
566 nmdc:mga06r32_46702_c1
567 nmdc:mga08y16_183139_c1
568 nmdc:mga08y16_4047_c1
569 nmdc:mga08y16_97060_c1
570 nmdc:mga0n895_1742_c1
571 nmdc:mga0n895_209922_c1
572 nmdc:mga0rr50_33441_c1
573 nmdc:mga0rr50_4978_c1
574 nmdc:mga08x19_149836_c1
575 nmdc:mga08x19_23750_c1
576 nmdc:mga08x19_5845_c1
577 nmdc:mga0a205_114066_c1
578 nmdc:mga0a205_343987_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

41

399

0.85

PF13520

AA_permease_2

Amino acid permease

35

458

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8612 13 394
7nf6-assembly1.cif.gz_B ovine b0,+at-rbat heterodimer 0.851 10 400
6li9-assembly1.cif.gz_B heteromeric amino acid transporter b0,+at-rbat complex bound with arginine 0.8373 11 397
7dsk-assembly1.cif.gz_B overall structure of the lat1-4f2hc bound with jx-075 0.8341 7 405
8a6l-assembly1.cif.gz_B human 4f2hc-lat2 heterodimeric amino acid transporter in complex with anticalin d11vs 0.8287 12 395
ID Description Score Start End Superfamily
af_Q50E62_26_473_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8631 7 408 1.20.1740.10
af_Q8IR48_79_518_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8621 7 400 1.20.1740.10
af_Q5RKI7_10_447_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8576 7 400 1.20.1740.10
af_D4ADU2_38_483_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.855 7 397 1.20.1740.10
af_Q2FYJ4_6_440_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8544 6 403 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2D6LWU5-F1-model_v4 deleted 0.9077 2 401
AF-A0A0S2W8A7-F1-model_v4 Amino acid permease 0.9039 7 393 GO:0005886
GO:0015179
AF-A0A6N8ZF84-F1-model_v4 deleted 0.9035 2 395
AF-A0A539ELR2-F1-model_v4 Amino acid transporter 0.9023 2 391 GO:0005886
GO:0015179
AF-A0A6G0AJF7-F1-model_v4 Amino acid permease 0.9019 1 394 GO:0005886
GO:0015179

Map