F389213

General Info

Members Datasets Scaffolds Average Seq Length
289 244 578 235

Family's Representative Sequence

Representative Sequence 3300020082|Ga0206353_10294694|Ga0206353_102946941
Length 259
Sequence VSWNWRTSSAAEDRSVPLPREPEPVATLAPPVLRARVLVVDADEHARTHLRNLLADEGYDVVEAPDGPEALELFSDAVDLVLIELALPGMSGFQVWRTIRETSDAAIVVVTSLREEVDTVLALEIGADDYITKPFLDRELALRLRAVLRRARHDPSAGREPAIAEHRLHLDAQLQSVNVDGRQVALSPREFRLLELLLRSGGRLLTRTQILTAVWGEEAMPDNKTLDAQVRRLRAKIELDPHHPALLATVRGRGYRLAL

Samples

Sample ID Description Type Environment
1 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
19 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
27 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
28 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
30 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
37 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
38 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
39 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
42 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
46 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
47 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
48 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
49 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
50 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
51 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
52 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
53 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
54 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
55 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
56 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
63 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
64 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
65 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
66 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
67 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
76 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
77 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
78 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
79 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
85 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300049554 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
96 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
97 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
103 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
104 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
105 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
106 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
107 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
108 2554235283 Bacillus safensis VK Isolate Rhizosphere
109 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
110 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
111 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
112 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
113 2599185353 Staphylococcus sp. NFPP34 Isolate Rhizoplane
114 2600254943 Staphylococcus pasteuri NFIX07 Isolate Rhizoplane
115 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
116 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
117 2643221714 Streptomyces sp. Root264 Isolate Unclassified
118 2643221729 Bacillus sp. Root11 Isolate Unclassified
119 2643221730 Bacillus sp. Root131 Isolate Unclassified
120 2643221735 Bacillus sp. Root920 Isolate Unclassified
121 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
122 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
123 2671180694 Paenibacillus sp. A3 Isolate Unclassified
124 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
125 2684622632 Bacillus cereus 905 Isolate Unclassified
126 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
127 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
128 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
129 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
130 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
131 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
132 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
133 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
134 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
135 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
136 2738541295 Bacillus sp. OK085 Isolate Unclassified
137 2738541358 Bacillus sp. OV752 Isolate Unclassified
138 2738543006 Bacillus sp. OK077 Isolate Unclassified
139 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
140 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
141 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
142 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
143 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
144 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
145 2811994870 Bacillus sp. JB4 Isolate Unclassified
146 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
147 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
148 2818991441 Niallia circulans 3243 Isolate Rhizosphere
149 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
150 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
151 2818991459 Paenibacillus sp. 597 Isolate Unclassified
152 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
153 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
154 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
155 2842682962 Bacillus sp. R-72492 Isolate Unclassified
156 2849139964 Bacillus sp. R-71875 Isolate Unclassified
157 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
158 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
159 2857581216 Bacillus sp. R-71922 Isolate Unclassified
160 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
161 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
162 2860837431 Bacillus sp. WR11 Isolate Unclassified
163 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
164 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
165 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
166 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
167 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
168 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
169 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
170 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
171 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
172 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
173 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
174 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
175 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
176 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
177 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
178 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
179 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
180 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
181 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
182 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
183 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
184 2919726948 Bacillus pumilus 4489 Isolate Unclassified
185 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
186 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
187 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
188 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
189 2938917290 Bacillus sp. CR71 Isolate Unclassified
190 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
191 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
192 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
193 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
194 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
195 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
196 2965761152 Bacillus sp. COPE52 Isolate Unclassified
197 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
198 2969141011 Bacillus velezensis MH25 Isolate Unclassified
199 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
200 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
201 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
202 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
203 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
204 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
205 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
206 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
207 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
208 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
209 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
210 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
211 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
212 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
213 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
214 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
215 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
216 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
217 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
218 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
219 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
220 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
221 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
222 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
223 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
224 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
225 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
226 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
227 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
228 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
229 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
230 8022653035 Bacillus sp. Rc4 Isolate Unclassified
231 8022792930 Bacillus sp. Xin Isolate Rhizosphere
232 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
233 8023438354 Bacillus sp. BH2 Isolate Unclassified
234 8023444577 Bacillus sp. BH32 Isolate Unclassified
235 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
236 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
237 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
238 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
239 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
240 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
241 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
242 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
243 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
244 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 46.37
Metatranscriptomes 4.5
Isolates 49.13

Biome Distribution

Category Percentage (%)
Aerial Root 0.69
Bulb 0
Endosphere 10.03
Nodule 0.35
Rhizoplane 3.46
Rhizosphere 55.02
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0206353_10294694 3300020082 Bacteria 1230
2 JGI25159J45721_1000620 3300002987 Bacteria 15799
3 JGI25151J46595_10001692 3300003187 Bacteria 14407
4 JGI25151J46595_10003767 3300003187 Bacteria 8229
5 JGI25151J46595_10008174 3300003187 Bacteria 5057
6 JGI25151J46595_10012613 3300003187 Bacteria 3838
7 JGI25151J46595_10041920 3300003187 Bacteria 1656
8 JGI25151J46595_10048086 3300003187 Bacteria 1478
9 rootH2_10002931 3300003320 Bacteria 14935
10 Ga0006562J51391_1003626 3300003578 Bacteria 6840
11 Ga0006562J51391_1039238 3300003578 Bacteria 2132
12 Ga0055538_1000182 3300003751 Bacteria 38981
13 Ga0055536_1020361 3300003781 Bacteria 2050
14 Ga0055541_1000137 3300003841 Bacteria 40035
15 Ga0065704_10232833 3300005289 Bacteria 1027
16 Ga0070708_100188452 3300005445 Bacteria 1929
17 Ga0070706_100210853 3300005467 Bacteria 1814
18 Ga0070707_100210231 3300005468 Bacteria 1896
19 Ga0070698_100021436 3300005471 Bacteria 6768
20 Ga0070699_100030197 3300005518 Bacteria 4678
21 Ga0070717_10094537 3300006028 Bacteria 2528
22 Ga0105251_10017954 3300009011 Bacteria 3777
23 Ga0105244_10005953 3300009036 Bacteria 7995
24 Ga0105244_10086400 3300009036 Bacteria 1547
25 Ga0105244_10170440 3300009036 Bacteria 1036
26 Ga0105250_10104711 3300009092 Bacteria 1156
27 Ga0105250_10109354 3300009092 Bacteria 1131
28 Ga0105250_10120709 3300009092 Bacteria 1077
29 Ga0105241_10408490 3300009174 Bacteria 1193
30 Ga0105237_10000043 3300009545 Bacteria 177946
31 Ga0157371_10001065 3300013102 Bacteria 29962
32 Ga0209784_100118 3300025224 Bacteria 83084
33 Ga0209566_100015 3300025225 Bacteria 457963
34 Ga0209566_100751 3300025225 Bacteria 17781
35 Ga0209147_101168 3300025229 Bacteria 10725
36 Ga0209258_100975 3300025242 Bacteria 13367
37 Ga0209130_1001261 3300025284 Bacteria 17641
38 Ga0209130_1003058 3300025284 Bacteria 7530
39 Ga0209675_1010108 3300025291 Bacteria 3254
40 Ga0209676_1003211 3300025292 Bacteria 10346
41 Ga0209025_1000001 3300025294 Bacteria 1888151
42 Ga0209025_1000258 3300025294 Bacteria 124837
43 Ga0209025_1001353 3300025294 Bacteria 32921
44 Ga0209025_1002218 3300025294 Bacteria 21433
45 Ga0209025_1003908 3300025294 Bacteria 13424
46 Ga0209025_1005509 3300025294 Bacteria 10281
47 Ga0209025_1007011 3300025294 Bacteria 8543
48 Ga0209025_1018591 3300025294 Bacteria 3924
49 Ga0209025_1032202 3300025294 Bacteria 2457
50 Ga0209025_1092120 3300025294 Bacteria 987
51 Ga0207696_1002052 3300025711 Bacteria 10171
52 Ga0207696_1005482 3300025711 Bacteria 5258
53 Ga0207696_1074433 3300025711 Bacteria 942
54 Ga0207655_1003854 3300025728 Bacteria 10923
55 Ga0207655_1120402 3300025728 Bacteria 871
56 Ga0207684_10053273 3300025910 Bacteria 3435
57 Ga0207684_10137071 3300025910 Bacteria 2102
58 Ga0207671_10000046 3300025914 Bacteria 199770
59 Ga0207646_10131022 3300025922 Bacteria 2257
60 Ga0207694_10006664 3300025924 Bacteria 8774
61 Ga0209371_1011578 3300027312 Bacteria 2610
62 Ga0237817_10045 3300030083 Bacteria 42887
63 Ga0237817_10122 3300030083 Bacteria 23916
64 Ga0268256_1012577 3300030500 Bacteria 2610
65 Ga0307408_100023248 3300031548 Bacteria 4220
66 Ga0307413_10797988 3300031824 Bacteria 793
67 Ga0307518_10032589 3300031838 Bacteria 3778
68 Ga0307412_10167869 3300031911 Bacteria 1638
69 Ga0307409_100090651 3300031995 Bacteria 2503
70 Ga0307416_100057718 3300032002 Bacteria 3142
71 Ga0307416_100227775 3300032002 Bacteria 1794
72 Ga0307416_100318510 3300032002 Bacteria 1556
73 Ga0307416_100624982 3300032002 Bacteria 1159
74 Ga0307416_100912911 3300032002 Bacteria 979
75 Ga0307415_100065984 3300032126 Bacteria 2524
76 Ga0395905_0517329 3300037471 Bacteria 1094
77 Ga0436364_0089597 3300037853 Bacteria 2417
78 Ga0436364_0170294 3300037853 Unclassified 1953
79 Ga0436364_0907880 3300037853 Bacteria 1131
80 Ga0395901_1005140 3300038443 Bacteria 810
81 Ga0237819_00041 3300038705 Bacteria 45359
82 Ga0436365_1903240 3300039437 Unclassified 1015
83 Ga0436363_0544134 3300039450 Bacteria 2670
84 Ga0439439_0031357 3300041406 Bacteria 1354
85 Ga0439433_0005529 3300041999 Bacteria 2712
86 Ga0439449_0000314 3300042007 Bacteria 17505
87 Ga0439462_0000743 3300042015 Bacteria 6739
88 Ga0466961_0047691 3300044693 Bacteria 2739
89 Ga0466968_0014207 3300044735 Bacteria 3144
90 Ga0466959_0010221 3300045049 Bacteria 6701
91 Ga0466958_0055712 3300045836 Bacteria 2400
92 Ga0466967_0000945 3300045976 Bacteria 15683
93 Ga0466967_0578496 3300045976 Bacteria 1107
94 Ga0495592_0021540 3300046454 Bacteria 4903
95 Ga0495606_0158798 3300046507 Bacteria 1321
96 Ga0495637_0031591 3300046520 Bacteria 2341
97 Ga0495654_0060593 3300046530 Bacteria 1819
98 Ga0495622_0017911 3300046557 Bacteria 3299
99 Ga0495661_0065606 3300046665 Bacteria 2139
100 Ga0495661_0101648 3300046665 Bacteria 1617
101 Ga0495660_0053901 3300046810 Bacteria 2181
102 Ga0496105_0186029 3300048908 Bacteria 1700
103 Ga0496107_0099904 3300048910 Bacteria 2127
104 Ga0496110_0000513 3300048913 Bacteria 26329
105 Ga0496110_0195237 3300048913 Bacteria 1838
106 Ga0496110_0480562 3300048913 Bacteria 1132
107 Ga0496110_0548993 3300048913 Bacteria 1050
108 Ga0496112_0047495 3300048915 Bacteria 4211
109 Ga0496113_0153878 3300048916 Bacteria 1815
110 Ga0496117_0006483 3300048920 Bacteria 11817
111 Ga0496119_0001841 3300048922 Bacteria 24521
112 Ga0496119_0085090 3300048922 Bacteria 1811
113 Ga0496120_0075372 3300048923 Bacteria 1841
114 Ga0496121_0019130 3300048924 Bacteria 6865
115 Ga0496121_0069754 3300048924 Bacteria 2835
116 Ga0496122_0025515 3300048925 Bacteria 5129
117 Ga0496122_0027752 3300048925 Bacteria 4829
118 Ga0496123_0010395 3300048926 Bacteria 8231
119 Ga0496123_0013486 3300048926 Bacteria 6853
120 Ga0496124_0000805 3300048927 Bacteria 50918
121 Ga0496125_0000492 3300048928 Bacteria 69225
122 Ga0496125_0001374 3300048928 Bacteria 35737
123 Ga0496125_0286850 3300048928 Bacteria 1016
124 Ga0496126_0010767 3300048929 Bacteria 9550
125 Ga0501305_002504 3300049161 Bacteria 1992
126 Ga0501313_007006 3300049529 Bacteria 1235
127 Ga0501315_016919 3300049531 Bacteria 948
128 Ga0501316_003924 3300049532 Bacteria 1473
129 Ga0501317_000068 3300049533 Bacteria 4937
130 Ga0501317_002099 3300049533 Bacteria 1832
131 Ga0501321_003991 3300049537 Bacteria 1387
132 Ga0501335_000079 3300049551 Bacteria 4249
133 Ga0501336_000602 3300049552 Bacteria 1871
134 Ga0501338_00131 3300049554 Bacteria 2621
135 Ga0501032_0001717 3300049569 Bacteria 17321
136 Ga0501047_0167939 3300049581 Bacteria 2064
137 Ga0501071_0254466 3300049587 Bacteria 1326
138 Ga0501075_0828051 3300049591 Bacteria 704
139 Ga0501217_122391 3300049661 Bacteria 756
140 Ga0501234_026956 3300049707 Bacteria 923
141 Ga0501245_018949 3300049708 Bacteria 1062
142 Ga0501081_0161981 3300049743 Bacteria 1612
143 Ga0501270_012350 3300049767 Bacteria 1164
144 Ga0501035_0031799 3300049822 Bacteria 4807
145 Ga0501044_0020544 3300049823 Bacteria 7050
146 Ga0501044_0032990 3300049823 Bacteria 5442
147 Ga0530510_0429225 3300061734 Bacteria 998
148 2511700082 2511231119 Bacteria 4019861
149 2512732491 2512564039 Bacteria 8739048
150 2524186253 2524023129 Bacteria 6762600
151 2545556767 2545555800 Bacteria 4222588
152 2553391697 2551306519 Bacteria 5465154
153 2555467486 2554235283 Bacteria 3683090
154 2556064667 2554235469 Bacteria 3590176
155 2563928949 2563366752 Bacteria 4961801
156 2578931017 2576861599 Bacteria 4217202
157 2587738675 2585428059 Bacteria 8696589
158 2600198580 2599185353 Bacteria 2219443
159 2600401157 2600254943 Bacteria 2613887
160 2631984320 2630968484 Bacteria 3876276
161 2644421749 2643221676 Bacteria 8119172
162 2644627882 2643221714 Bacteria 9015452
163 2644703969 2643221729 Bacteria 6621700
164 2644708662 2643221730 Bacteria 6523787
165 2644740660 2643221735 Bacteria 3676263
166 2651532040 2648501850 Bacteria 3975476
167 2672336791 2671180330 Bacteria 5521719
168 2673823535 2671180694 Bacteria 7506943
169 2674419186 2671180844 Bacteria 4164150
170 2685149398 2684622632 Bacteria 5380049
171 2686997312 2684623153 Bacteria 3878815
172 2687498619 2687453109 Bacteria 3860091
173 2695628060 2695420354 Bacteria 3922431
174 2698323780 2695420987 Bacteria 6152737
175 2705993444 2703719227 Bacteria 5631989
176 2712197572 2711768088 Bacteria 3195027
177 2717916229 2716884898 Bacteria 3928789
178 2721504779 2718218445 Bacteria 5113413
179 2723604663 2721755693 Bacteria 6126117
180 2730135303 2728369359 Bacteria 5621728
181 2738814315 2738541295 Bacteria 5730091
182 2739156251 2738541358 Bacteria 5932299
183 2739210809 2738543006 Bacteria 5904091
184 2753809890 2751185905 Bacteria 6142767
185 2791212531 2788500588 Bacteria 4584915
186 2793186309 2791355222 Bacteria 5898266
187 2802436922 2802428803 Bacteria 5806948
188 2808869270 2808606364 Bacteria 4465927
189 2809057080 2808606399 Bacteria 4021018
190 2812316505 2811994870 Bacteria 3776934
191 2816862750 2816332186 Bacteria 5331395
192 2817480555 2816332295 Bacteria 4352468
193 2819569626 2818991441 Bacteria 5062707
194 2819579454 2818991443 Bacteria 6598732
195 2819626127 2818991451 Bacteria 4697364
196 2819669267 2818991459 Bacteria 8736032
197 2819723573 2818991468 Bacteria 3723169
198 2823528486 2823526263 Bacteria 3765752
199 2831905770 2831905167 Bacteria 3319172
200 2842684328 2842682962 Bacteria 5589973
201 2849144294 2849139964 Bacteria 5613304
202 2852675250 2852673933 Bacteria 3347676
203 2857453764 2857453340 Bacteria 8090534
204 2857582484 2857581216 Bacteria 5522813
205 2857604250 2857604169 Bacteria 5111450
206 2857610907 2857609550 Bacteria 3753890
207 2860839933 2860837431 Bacteria 4202080
208 2864997850 2864997549 Bacteria 5139696
209 2865003651 2865002811 Bacteria 6333767
210 2877770964 2877768649 Bacteria 3957164
211 2880171829 2880169592 Bacteria 3900066
212 2881644242 2881644220 Bacteria 5302661
213 2888581130 2888578766 Bacteria 6743310
214 2889050193 2889049205 Bacteria 7524325
215 2889280571 2889276214 Bacteria 5979355
216 2889297212 2889295896 Bacteria 4704906
217 2897112054 2897109615 Bacteria 4009619
218 2904118253 2904113452 Bacteria 7796941
219 2904561919 2904560550 Bacteria 4029838
220 2904595497 2904595352 Bacteria 6124848
221 2904606799 2904606771 Bacteria 4684500
222 2904762033 2904755435 Bacteria 7986759
223 2907205256 2907202186 Bacteria 6632024
224 2908668309 2908665501 Bacteria 3678115
225 2916974387 2916971899 Bacteria 4250608
226 2919096078 2919093281 Bacteria 3660974
227 2919415278 2919414237 Bacteria 5429133
228 2919431513 2919425241 Bacteria 8055701
229 2919728204 2919726948 Bacteria 3696050
230 2928513882 2928510474 Bacteria 4815308
231 2929208672 2929206907 Bacteria 5918291
232 2929234673 2929233124 Bacteria 5948380
233 2936367226 2936361878 Bacteria 5632809
234 2938918848 2938917290 Bacteria 5914775
235 2939593389 2939593269 Bacteria 4798695
236 2939705251 2939702853 Bacteria 5139229
237 2947428220 2947426588 Bacteria 5357194
238 2954773997 2954773129 Bacteria 3741715
239 2962293205 2962290636 Bacteria 4072939
240 2964377108 2964375228 Bacteria 4909004
241 2965762712 2965761152 Bacteria 5806513
242 2969139216 2969136845 Bacteria 3923176
243 2969143411 2969141011 Bacteria 4118468
244 2969767181 2969765954 Bacteria 4216713
245 2969773504 2969770375 Bacteria 4271280
246 2971417132 2971410472 Bacteria 8311090
247 2971895610 2971893375 Bacteria 3929648
248 2977256766 2977254563 Bacteria 4828420
249 2979085144 2979083700 Bacteria 5894929
250 2980126859 2980125574 Bacteria 5567337
251 2980189756 2980182181 Bacteria 9454109
252 2980494948 2980492589 Bacteria 4072961
253 2981285690 2981284811 Bacteria 4641497
254 2981290637 2981289755 Bacteria 4641509
255 2981980740 2981980479 Bacteria 4641628
256 2981985618 2981985349 Bacteria 4641497
257 2984530096 2984527788 Bacteria 5288478
258 2984536203 2984532647 Bacteria 5288506
259 2990277641 2990275345 Bacteria 4887158
260 2996709493 2996706504 Bacteria 5757485
261 3001268228 3001267043 Bacteria 4823521
262 3001273725 3001272096 Bacteria 4729684
263 3001897956 3001892409 Bacteria 6328293
264 3006829396 3006826541 Bacteria 4678913
265 3006860904 3006858327 Bacteria 4317835
266 3006881435 3006879489 Bacteria 4064221
267 3006972898 3006969106 Bacteria 4739423
268 3006975697 3006973921 Bacteria 4423788
269 3006981599 3006978542 Bacteria 5328100
270 3006984702 3006984091 Bacteria 4207523
271 3006989104 3006988479 Bacteria 4767936
272 648170706 648028048 Bacteria 5394884
273 8022622642 8022621104 Bacteria 5241040
274 8022633664 8022630665 Bacteria 3886130
275 8022657443 8022653035 Bacteria 4035078
276 8022798149 8022792930 Bacteria 5693794
277 8022949662 8022948649 Bacteria 5366783
278 8023442473 8023438354 Bacteria 5779374
279 8023447931 8023444577 Bacteria 5661597
280 8051955450 8051952484 Bacteria 3926774
281 8052176837 8052174270 Bacteria 3881265
282 8054281423 8054280661 Bacteria 4232245
283 8054798245 8054795415 Bacteria 9785225
284 8055533208 8055531788 Bacteria 5249694
285 8055635658 8055632911 Bacteria 5283357
286 8056536457 8056533031 Bacteria 8964429
287 8057478316 8057473075 Bacteria 5892720
288 8057584227 8057582654 Bacteria 5218944
289 8057635228 8057632132 Bacteria 4726859
290 Ga0206353_10294694
291 JGI25159J45721_1000620
292 JGI25151J46595_10001692
293 JGI25151J46595_10003767
294 JGI25151J46595_10008174
295 JGI25151J46595_10012613
296 JGI25151J46595_10041920
297 JGI25151J46595_10048086
298 rootH2_10002931
299 Ga0006562J51391_1003626
300 Ga0006562J51391_1039238
301 Ga0055538_1000182
302 Ga0055536_1020361
303 Ga0055541_1000137
304 Ga0065704_10232833
305 Ga0070708_100188452
306 Ga0070706_100210853
307 Ga0070707_100210231
308 Ga0070698_100021436
309 Ga0070699_100030197
310 Ga0070717_10094537
311 Ga0105251_10017954
312 Ga0105244_10005953
313 Ga0105244_10086400
314 Ga0105244_10170440
315 Ga0105250_10104711
316 Ga0105250_10109354
317 Ga0105250_10120709
318 Ga0105241_10408490
319 Ga0105237_10000043
320 Ga0157371_10001065
321 Ga0209784_100118
322 Ga0209566_100015
323 Ga0209566_100751
324 Ga0209147_101168
325 Ga0209258_100975
326 Ga0209130_1001261
327 Ga0209130_1003058
328 Ga0209675_1010108
329 Ga0209676_1003211
330 Ga0209025_1000001
331 Ga0209025_1000258
332 Ga0209025_1001353
333 Ga0209025_1002218
334 Ga0209025_1003908
335 Ga0209025_1005509
336 Ga0209025_1007011
337 Ga0209025_1018591
338 Ga0209025_1032202
339 Ga0209025_1092120
340 Ga0207696_1002052
341 Ga0207696_1005482
342 Ga0207696_1074433
343 Ga0207655_1003854
344 Ga0207655_1120402
345 Ga0207684_10053273
346 Ga0207684_10137071
347 Ga0207671_10000046
348 Ga0207646_10131022
349 Ga0207694_10006664
350 Ga0209371_1011578
351 Ga0237817_10045
352 Ga0237817_10122
353 Ga0268256_1012577
354 Ga0307408_100023248
355 Ga0307413_10797988
356 Ga0307518_10032589
357 Ga0307412_10167869
358 Ga0307409_100090651
359 Ga0307416_100057718
360 Ga0307416_100227775
361 Ga0307416_100318510
362 Ga0307416_100624982
363 Ga0307416_100912911
364 Ga0307415_100065984
365 Ga0395905_0517329
366 Ga0436364_0089597
367 Ga0436364_0170294
368 Ga0436364_0907880
369 Ga0395901_1005140
370 Ga0237819_00041
371 Ga0436365_1903240
372 Ga0436363_0544134
373 Ga0439439_0031357
374 Ga0439433_0005529
375 Ga0439449_0000314
376 Ga0439462_0000743
377 Ga0466961_0047691
378 Ga0466968_0014207
379 Ga0466959_0010221
380 Ga0466958_0055712
381 Ga0466967_0000945
382 Ga0466967_0578496
383 Ga0495592_0021540
384 Ga0495606_0158798
385 Ga0495637_0031591
386 Ga0495654_0060593
387 Ga0495622_0017911
388 Ga0495661_0065606
389 Ga0495661_0101648
390 Ga0495660_0053901
391 Ga0496105_0186029
392 Ga0496107_0099904
393 Ga0496110_0000513
394 Ga0496110_0195237
395 Ga0496110_0480562
396 Ga0496110_0548993
397 Ga0496112_0047495
398 Ga0496113_0153878
399 Ga0496117_0006483
400 Ga0496119_0001841
401 Ga0496119_0085090
402 Ga0496120_0075372
403 Ga0496121_0019130
404 Ga0496121_0069754
405 Ga0496122_0025515
406 Ga0496122_0027752
407 Ga0496123_0010395
408 Ga0496123_0013486
409 Ga0496124_0000805
410 Ga0496125_0000492
411 Ga0496125_0001374
412 Ga0496125_0286850
413 Ga0496126_0010767
414 Ga0501305_002504
415 Ga0501313_007006
416 Ga0501315_016919
417 Ga0501316_003924
418 Ga0501317_000068
419 Ga0501317_002099
420 Ga0501321_003991
421 Ga0501335_000079
422 Ga0501336_000602
423 Ga0501338_00131
424 Ga0501032_0001717
425 Ga0501047_0167939
426 Ga0501071_0254466
427 Ga0501075_0828051
428 Ga0501217_122391
429 Ga0501234_026956
430 Ga0501245_018949
431 Ga0501081_0161981
432 Ga0501270_012350
433 Ga0501035_0031799
434 Ga0501044_0020544
435 Ga0501044_0032990
436 Ga0530510_0429225
437 2511700082
438 2512732491
439 2524186253
440 2545556767
441 2553391697
442 2555467486
443 2556064667
444 2563928949
445 2578931017
446 2587738675
447 2600198580
448 2600401157
449 2631984320
450 2644421749
451 2644627882
452 2644703969
453 2644708662
454 2644740660
455 2651532040
456 2672336791
457 2673823535
458 2674419186
459 2685149398
460 2686997312
461 2687498619
462 2695628060
463 2698323780
464 2705993444
465 2712197572
466 2717916229
467 2721504779
468 2723604663
469 2730135303
470 2738814315
471 2739156251
472 2739210809
473 2753809890
474 2791212531
475 2793186309
476 2802436922
477 2808869270
478 2809057080
479 2812316505
480 2816862750
481 2817480555
482 2819569626
483 2819579454
484 2819626127
485 2819669267
486 2819723573
487 2823528486
488 2831905770
489 2842684328
490 2849144294
491 2852675250
492 2857453764
493 2857582484
494 2857604250
495 2857610907
496 2860839933
497 2864997850
498 2865003651
499 2877770964
500 2880171829
501 2881644242
502 2888581130
503 2889050193
504 2889280571
505 2889297212
506 2897112054
507 2904118253
508 2904561919
509 2904595497
510 2904606799
511 2904762033
512 2907205256
513 2908668309
514 2916974387
515 2919096078
516 2919415278
517 2919431513
518 2919728204
519 2928513882
520 2929208672
521 2929234673
522 2936367226
523 2938918848
524 2939593389
525 2939705251
526 2947428220
527 2954773997
528 2962293205
529 2964377108
530 2965762712
531 2969139216
532 2969143411
533 2969767181
534 2969773504
535 2971417132
536 2971895610
537 2977256766
538 2979085144
539 2980126859
540 2980189756
541 2980494948
542 2981285690
543 2981290637
544 2981980740
545 2981985618
546 2984530096
547 2984536203
548 2990277641
549 2996709493
550 3001268228
551 3001273725
552 3001897956
553 3006829396
554 3006860904
555 3006881435
556 3006972898
557 3006975697
558 3006981599
559 3006984702
560 3006989104
561 648170706
562 8022622642
563 8022633664
564 8022657443
565 8022798149
566 8022949662
567 8023442473
568 8023447931
569 8051955450
570 8052176837
571 8054281423
572 8054798245
573 8055533208
574 8055635658
575 8056536457
576 8057478316
577 8057584227
578 8057635228

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

181

257

0.98

PF00072

Response_reg

Response regulator receiver domain

37

145

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9757 5 122
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.973 5 121
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9723 3 124
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9723 5 121
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9705 5 122
ID Description Score Start End Superfamily
af_Q2FY79_1_81_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 1.005 6 80 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 1.001 5 80 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9877 6 80 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9853 6 87 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9788 5 86 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7X2IIZ5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9836 1 121 GO:0000155
AF-A0A7C3HKX2-F1-model_v4 Response regulator 0.9739 5 123 GO:0000160
GO:0003677
AF-A0A351KYM3-F1-model_v4 Diguanylate cyclase 0.9732 5 121 GO:0000160
GO:0005524
GO:0005886
GO:0016301
GO:0043709
GO:0052621
GO:1902201
AF-A0A2N2HFV0-F1-model_v4 Fis family transcriptional regulator 0.9722 5 120 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A2T3N0B4-F1-model_v4 Response regulatory domain-containing protein 0.9721 6 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map