F388619

General Info

Members Datasets Scaffolds Average Seq Length
288 163 576 473

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10047595|Ga0207684_100475952
Length 564
Sequence MFVPRGLCCDNEPSPLPLGSARRLRDDSWCVRVAGAPRGPPRAQGYDVGVTLRLRNTLTRTVEPVVPLEPGRVRMYTCGPTVYRYAHVGNLRSYLLADLIRRVLVYHGLEVFHVKNITDVGHLRDERFDRGEDRMLVSAGLEDKSTTEIADAYEAAFHADEALVNILPANVFPRATEHIPEMVDLAEALVDAGHAYESPAGNVYYSVSSLPGYGRLSGNSLDDLRAGHRGEVEADKRDPADFALWKSAGEGRSLKWPTDRWGEGYPGWHLECSAMARRYLGDRFDLHTGGIDNVFPHHEDEIAQSAPLVGGPPAAMWVHGEFLLMAGRKMAKSAGNFQRVTELAERGLDPLAFRYLALTSRYGRKLNYSDASLTSAAAGLASLRSRLAALGPPPKDGPWAAPAVLVAGAAGDRPGGTAAGVAGFGGVVGYPVADRAHEPAAPLSIAGRDLHDRFVAALDDDLDLPVALAAVREMLRADLPADERRWLVLDADAVLGLDLHQVWDTYATEAAAAVVPTDVQLLVADRDRARSGGEYARADALRRELAERGWDVVDGPAGSTVRRR

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
84 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
100 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
101 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
102 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
103 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
104 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
158 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
159 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
160 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
161 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
162 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
163 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.92
Metatranscriptomes 0
Isolates 2.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 2.78
Rhizosphere 94.44
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10047595 3300025910 Bacteria 3636
2 JGI25406J46586_10041063 3300003203 Bacteria 1632
3 Ga0070687_100002475 3300005343 Bacteria 6945
4 Ga0070668_100085720 3300005347 Bacteria 2476
5 Ga0070674_100013725 3300005356 Bacteria 5014
6 Ga0070659_100191131 3300005366 Bacteria 1683
7 Ga0070709_10007763 3300005434 Bacteria 5890
8 Ga0070701_10015065 3300005438 Bacteria 3561
9 Ga0070701_10061602 3300005438 Bacteria 1979
10 Ga0070705_100003881 3300005440 Bacteria 7310
11 Ga0070705_100014968 3300005440 Bacteria 4002
12 Ga0070700_100013351 3300005441 Bacteria 4613
13 Ga0070694_100010064 3300005444 Bacteria 5815
14 Ga0070694_100011366 3300005444 Bacteria 5512
15 Ga0070694_100057946 3300005444 Bacteria 2634
16 Ga0070708_100038544 3300005445 Bacteria 4175
17 Ga0070708_100081681 3300005445 Bacteria 2926
18 Ga0070662_100037851 3300005457 Bacteria 3423
19 Ga0070706_100000195 3300005467 Bacteria 75731
20 Ga0070706_100008237 3300005467 Bacteria 9723
21 Ga0070706_100025859 3300005467 Bacteria 5402
22 Ga0070706_100168647 3300005467 Bacteria 2044
23 Ga0070706_100223408 3300005467 Bacteria 1758
24 Ga0070707_100001501 3300005468 Bacteria 22743
25 Ga0070707_100049469 3300005468 Bacteria 4029
26 Ga0070707_100106260 3300005468 Bacteria 2722
27 Ga0070698_100002097 3300005471 Bacteria 22132
28 Ga0070698_100003630 3300005471 Bacteria 16957
29 Ga0070699_100000014 3300005518 Bacteria 218133
30 Ga0070699_100001176 3300005518 Bacteria 24302
31 Ga0070699_100014883 3300005518 Bacteria 6687
32 Ga0070684_100167453 3300005535 Bacteria 1995
33 Ga0070697_100118663 3300005536 Bacteria 2211
34 Ga0068853_100046144 3300005539 Bacteria 3735
35 Ga0070686_100053701 3300005544 Bacteria 2574
36 Ga0070695_100004148 3300005545 Bacteria 8467
37 Ga0070695_100008083 3300005545 Bacteria 6234
38 Ga0070695_100041455 3300005545 Bacteria 2918
39 Ga0070696_100017268 3300005546 Bacteria 4870
40 Ga0070696_100036728 3300005546 Bacteria 3378
41 Ga0070693_100011823 3300005547 Bacteria 4403
42 Ga0068855_100009448 3300005563 Bacteria 11784
43 Ga0068857_100047829 3300005577 Bacteria 3798
44 Ga0068857_100080054 3300005577 Bacteria 2917
45 Ga0068852_100053157 3300005616 Bacteria 3485
46 Ga0068859_100018650 3300005617 Bacteria 6974
47 Ga0068861_100039214 3300005719 Bacteria 3534
48 Ga0068858_100119409 3300005842 Bacteria 2465
49 Ga0068860_100053880 3300005843 Bacteria 3823
50 Ga0068862_100053735 3300005844 Bacteria 3448
51 Ga0081455_10022907 3300005937 Bacteria 5824
52 Ga0081455_10047728 3300005937 Bacteria 3706
53 Ga0081538_10000001 3300005981 Bacteria 249890
54 Ga0081538_10000260 3300005981 Bacteria 60015
55 Ga0081538_10008482 3300005981 Bacteria 8710
56 Ga0081538_10008620 3300005981 Bacteria 8627
57 Ga0081538_10023095 3300005981 Bacteria 4481
58 Ga0081538_10026842 3300005981 Bacteria 4014
59 Ga0081539_10008138 3300005985 Bacteria 9256
60 Ga0081539_10009239 3300005985 Bacteria 8297
61 Ga0081539_10022592 3300005985 Bacteria 4156
62 Ga0081539_10030981 3300005985 Bacteria 3307
63 Ga0081539_10052943 3300005985 Bacteria 2276
64 Ga0070717_10000076 3300006028 Bacteria 82958
65 Ga0070717_10040661 3300006028 Bacteria 3788
66 Ga0075432_10004161 3300006058 Bacteria 4932
67 Ga0075430_100006521 3300006846 Bacteria 9839
68 Ga0075431_100023567 3300006847 Bacteria 6300
69 Ga0075431_100137137 3300006847 Bacteria 2523
70 Ga0075434_100284588 3300006871 Bacteria 1673
71 Ga0097620_100018650 3300006931 Bacteria 6974
72 Ga0075435_100069662 3300007076 Bacteria 2869
73 Ga0105240_10016111 3300009093 Bacteria 10128
74 Ga0105240_10214693 3300009093 Bacteria 2245
75 Ga0111539_10023560 3300009094 Bacteria 7565
76 Ga0111539_10025977 3300009094 Bacteria 7167
77 Ga0111539_10068629 3300009094 Bacteria 4186
78 Ga0111539_10097605 3300009094 Bacteria 3452
79 Ga0111539_10206589 3300009094 Bacteria 2289
80 Ga0105245_10062776 3300009098 Bacteria 3352
81 Ga0105245_10095752 3300009098 Bacteria 2739
82 Ga0114129_10000135 3300009147 Bacteria 76177
83 Ga0105243_10089798 3300009148 Bacteria 2527
84 Ga0105237_10002737 3300009545 Bacteria 21508
85 Ga0105238_10002025 3300009551 Bacteria 20465
86 Ga0105249_10019325 3300009553 Bacteria 6077
87 Ga0105030_100077 3300009987 Bacteria 7317
88 Ga0157369_10050252 3300013105 Unclassified 4516
89 Ga0157378_10005255 3300013297 Bacteria 11375
90 Ga0163162_10140415 3300013306 Bacteria 2529
91 Ga0163163_10129432 3300014325 Bacteria 2564
92 Ga0182008_10029537 3300014497 Bacteria 2770
93 Ga0157379_10017605 3300014968 Bacteria 6291
94 Ga0157379_10079319 3300014968 Bacteria 2940
95 Ga0157376_10077289 3300014969 Bacteria 2847
96 Ga0163161_10036306 3300017792 Bacteria 3529
97 Ga0163161_10068244 3300017792 Bacteria 2598
98 Ga0207647_10080018 3300025904 Unclassified 1960
99 Ga0207643_10042128 3300025908 Bacteria 2573
100 Ga0207684_10005206 3300025910 Bacteria 12087
101 Ga0207684_10008124 3300025910 Bacteria 9356
102 Ga0207684_10024067 3300025910 Bacteria 5196
103 Ga0207684_10046452 3300025910 Bacteria 3684
104 Ga0207684_10047896 3300025910 Bacteria 3625
105 Ga0207707_10092396 3300025912 Bacteria 2644
106 Ga0207707_10141368 3300025912 Bacteria 2104
107 Ga0207671_10000014 3300025914 Bacteria 461481
108 Ga0207660_10001788 3300025917 Bacteria 14359
109 Ga0207660_10021057 3300025917 Unclassified 4381
110 Ga0207649_10081534 3300025920 Bacteria 2095
111 Ga0207652_10011955 3300025921 Bacteria 7005
112 Ga0207652_10095601 3300025921 Bacteria 2617
113 Ga0207646_10001406 3300025922 Bacteria 29871
114 Ga0207646_10002416 3300025922 Bacteria 22043
115 Ga0207646_10003148 3300025922 Bacteria 18908
116 Ga0207646_10004190 3300025922 Bacteria 15798
117 Ga0207646_10204420 3300025922 Bacteria 1784
118 Ga0207646_10293821 3300025922 Bacteria 1468
119 Ga0207694_10002116 3300025924 Bacteria 16351
120 Ga0207706_10029541 3300025933 Bacteria 4893
121 Ga0207706_10100328 3300025933 Bacteria 2547
122 Ga0207669_10021240 3300025937 Bacteria 3423
123 Ga0207689_10130116 3300025942 Bacteria 2071
124 Ga0207667_10031480 3300025949 Bacteria 5726
125 Ga0207667_10077655 3300025949 Bacteria 3443
126 Ga0207712_10110627 3300025961 Bacteria 2060
127 Ga0207703_10178430 3300026035 Bacteria 1873
128 Ga0207678_10086387 3300026067 Bacteria 2681
129 Ga0207708_10001970 3300026075 Bacteria 15150
130 Ga0207648_10001899 3300026089 Bacteria 22836
131 Ga0207674_10006294 3300026116 Bacteria 13991
132 Ga0207674_10012710 3300026116 Bacteria 9409
133 Ga0207674_10096695 3300026116 Bacteria 2937
134 Ga0207675_100009358 3300026118 Bacteria 9183
135 Ga0207675_100021373 3300026118 Bacteria 6028
136 Ga0207698_10006258 3300026142 Bacteria 7407
137 Ga0207698_10072028 3300026142 Bacteria 2745
138 Ga0207428_10003081 3300027907 Bacteria 16406
139 Ga0268264_10037058 3300028381 Bacteria 4019
140 Ga0265319_1019597 3300028563 Bacteria 2521
141 Ga0265318_10015252 3300028577 Bacteria 3201
142 Ga0265338_10005476 3300028800 Bacteria 16562
143 Ga0265338_10015939 3300028800 Bacteria 8219
144 Ga0307405_10034113 3300031731 Bacteria 3025
145 Ga0307413_10005622 3300031824 Bacteria 5619
146 Ga0307413_10060229 3300031824 Bacteria 2336
147 Ga0307410_10038594 3300031852 Bacteria 3129
148 Ga0307406_10001744 3300031901 Bacteria 11922
149 Ga0307406_10012367 3300031901 Bacteria 4868
150 Ga0307407_10014494 3300031903 Bacteria 3863
151 Ga0307407_10140858 3300031903 Bacteria 1556
152 Ga0307412_10182136 3300031911 Bacteria 1581
153 Ga0307409_100001114 3300031995 Bacteria 12714
154 Ga0307409_100017463 3300031995 Bacteria 4784
155 Ga0307409_100024415 3300031995 Bacteria 4216
156 Ga0307416_100002273 3300032002 Bacteria 10948
157 Ga0307416_100009829 3300032002 Bacteria 6288
158 Ga0307416_100010105 3300032002 Bacteria 6218
159 Ga0307416_100035136 3300032002 Bacteria 3823
160 Ga0307416_100191269 3300032002 Bacteria 1930
161 Ga0307411_10016766 3300032005 Bacteria 4154
162 Ga0307415_100000597 3300032126 Bacteria 15809
163 Ga0307415_100001222 3300032126 Bacteria 12038
164 Ga0307415_100001668 3300032126 Bacteria 10777
165 Ga0307415_100002391 3300032126 Bacteria 9353
166 Ga0307415_100004420 3300032126 Bacteria 7290
167 Ga0307415_100005921 3300032126 Bacteria 6545
168 Ga0373955_0060737 3300035172 Bacteria 2086
169 Ga0395901_0059744 3300038443 Bacteria 3966
170 Ga0395901_0258686 3300038443 Bacteria 1812
171 Ga0436365_1283453 3300039437 Bacteria 2095
172 Ga0451853_1414464 3300041512 Bacteria 2758
173 Ga0439450_003065 3300042008 Bacteria 2718
174 Ga0439450_009432 3300042008 Bacteria 1853
175 Ga0439455_0019748 3300042012 Bacteria 1591
176 Ga0439456_004345 3300042013 Bacteria 2866
177 Ga0439444_0009484 3300042437 Bacteria 1535
178 Ga0439440_0002116 3300042993 Bacteria 3709
179 Ga0439440_0014027 3300042993 Bacteria 1725
180 Ga0453684_0000727 3300044712 Bacteria 115790
181 Ga0495651_0021880 3300046462 Bacteria 4972
182 Ga0495584_0020530 3300046491 Bacteria 3355
183 Ga0495656_0005276 3300046615 Bacteria 4452
184 Ga0495658_0088842 3300046683 Bacteria 1827
185 Ga0495669_0002448 3300046684 Bacteria 7581
186 Ga0495677_0023023 3300047445 Bacteria 2261
187 Ga0496102_0174345 3300048905 Bacteria 2024
188 Ga0496106_0110876 3300048909 Bacteria 2136
189 Ga0496108_0018154 3300048911 Bacteria 5757
190 Ga0496108_0061597 3300048911 Bacteria 3158
191 Ga0496109_0168974 3300048912 Bacteria 2051
192 Ga0496110_0098076 3300048913 Bacteria 2626
193 Ga0496111_0096168 3300048914 Bacteria 2174
194 Ga0496112_0000005 3300048915 Bacteria 525541
195 Ga0501031_0000856 3300049568 Bacteria 18284
196 Ga0501031_0003348 3300049568 Bacteria 10290
197 Ga0501031_0045822 3300049568 Bacteria 2853
198 Ga0501032_0021584 3300049569 Bacteria 4475
199 Ga0501033_0014204 3300049570 Bacteria 6053
200 Ga0501033_0036586 3300049570 Bacteria 3678
201 Ga0501036_0002559 3300049572 Bacteria 14301
202 Ga0501036_0034337 3300049572 Bacteria 4290
203 Ga0501037_0000617 3300049573 Bacteria 27594
204 Ga0501037_0034130 3300049573 Bacteria 3755
205 Ga0501037_0037141 3300049573 Unclassified 3591
206 Ga0501038_0001416 3300049574 Bacteria 21957
207 Ga0501038_0006742 3300049574 Bacteria 10608
208 Ga0501039_0000812 3300049575 Bacteria 22543
209 Ga0501039_0001235 3300049575 Bacteria 18736
210 Ga0501039_0058817 3300049575 Bacteria 2978
211 Ga0501040_0000361 3300049576 Bacteria 26839
212 Ga0501040_0000484 3300049576 Bacteria 23721
213 Ga0501040_0003106 3300049576 Bacteria 10764
214 Ga0501041_0000421 3300049577 Bacteria 21411
215 Ga0501041_0001923 3300049577 Bacteria 11654
216 Ga0501042_0000276 3300049578 Bacteria 25119
217 Ga0501042_0000462 3300049578 Bacteria 20967
218 Ga0501042_0022467 3300049578 Bacteria 4406
219 Ga0501043_0021896 3300049579 Bacteria 5013
220 Ga0501046_0005648 3300049580 Bacteria 11164
221 Ga0501046_0014377 3300049580 Bacteria 6683
222 Ga0501046_0018834 3300049580 Bacteria 5734
223 Ga0501047_0277765 3300049581 Bacteria 1520
224 Ga0501048_0000049 3300049582 Bacteria 58362
225 Ga0501048_0000949 3300049582 Bacteria 21431
226 Ga0501048_0023614 3300049582 Bacteria 4493
227 Ga0501067_0005375 3300049583 Bacteria 7109
228 Ga0501068_0015091 3300049584 Bacteria 4431
229 Ga0501068_0080579 3300049584 Bacteria 1997
230 Ga0501071_0000293 3300049587 Bacteria 24002
231 Ga0501071_0005975 3300049587 Bacteria 7885
232 Ga0501071_0007530 3300049587 Bacteria 7163
233 Ga0501072_0000113 3300049588 Bacteria 59615
234 Ga0501072_0002852 3300049588 Bacteria 12976
235 Ga0501072_0032081 3300049588 Bacteria 4113
236 Ga0501072_0039761 3300049588 Bacteria 3692
237 Ga0501074_0001917 3300049590 Bacteria 14296
238 Ga0501074_0020463 3300049590 Bacteria 4808
239 Ga0501074_0058014 3300049590 Bacteria 2789
240 Ga0501075_0000182 3300049591 Bacteria 32391
241 Ga0501075_0000596 3300049591 Bacteria 22083
242 Ga0501075_0030060 3300049591 Bacteria 4021
243 Ga0501075_0031347 3300049591 Bacteria 3945
244 Ga0501076_0000417 3300049592 Bacteria 26675
245 Ga0501076_0003917 3300049592 Bacteria 10495
246 Ga0501076_0084567 3300049592 Bacteria 2548
247 Ga0501076_0088491 3300049592 Bacteria 2489
248 Ga0501076_0157368 3300049592 Bacteria 1850
249 Ga0501077_0000774 3300049593 Bacteria 19304
250 Ga0501077_0001347 3300049593 Bacteria 14796
251 Ga0501079_0000293 3300049741 Bacteria 30845
252 Ga0501079_0001912 3300049741 Bacteria 14932
253 Ga0501079_0097255 3300049741 Bacteria 2282
254 Ga0501080_0013362 3300049742 Bacteria 7549
255 Ga0501080_0174344 3300049742 Bacteria 1982
256 Ga0501081_0001513 3300049743 Bacteria 14282
257 Ga0501081_0004591 3300049743 Bacteria 8869
258 Ga0501083_0067158 3300049744 Bacteria 2388
259 Ga0501035_0046858 3300049822 Bacteria 3886
260 Ga0501035_0055351 3300049822 Bacteria 3542
261 Ga0501035_0084532 3300049822 Bacteria 2798
262 Ga0501045_0001227 3300049824 Bacteria 17076
263 Ga0501045_0001559 3300049824 Bacteria 15262
264 Ga0501045_0002643 3300049824 Bacteria 12211
265 Ga0501045_0052096 3300049824 Bacteria 2987
266 nmdc:mga05p37_114606_c1 3300050507 Bacteria 3313
267 nmdc:mga05p37_44_c1 3300050507 Bacteria 107032
268 nmdc:mga09592_10199_c1 3300050508 Bacteria 7646
269 nmdc:mga0qj67_6770_c1 3300050509 Bacteria 8426
270 nmdc:mga06r32_16145_c1 3300050510 Bacteria 6802
271 nmdc:mga08y16_22615_c1 3300050511 Bacteria 6638
272 nmdc:mga0rr50_135834_c1 3300050513 Bacteria 1974
273 Ga0495595_0029461 3300053084 Bacteria 2457
274 Ga0500568_0000896 3300053139 Bacteria 20675
275 Ga0501084_0001961 3300054114 Bacteria 16433
276 Ga0501084_0005972 3300054114 Bacteria 10020
277 Ga0501082_0001141 3300060353 Bacteria 23438
278 Ga0501082_0004987 3300060353 Bacteria 11589
279 Ga0501082_0055157 3300060353 Bacteria 3424
280 Ga0530510_0000327 3300061734 Bacteria 30618
281 Ga0530510_0000353 3300061734 Bacteria 29688
282 Ga0530510_0029657 3300061734 Bacteria 3927
283 2873316864 2873314349 Bacteria 8512634
284 2884702896 2884693830 Bacteria 11273186
285 2895433988 2895427314 Bacteria 13147766
286 2895443921 2895442618 Bacteria 11027144
287 8055073546 8055066027 Bacteria 9479577
288 8055177369 8055172936 Bacteria 9305943
289 Ga0207684_10047595
290 JGI25406J46586_10041063
291 Ga0070687_100002475
292 Ga0070668_100085720
293 Ga0070674_100013725
294 Ga0070659_100191131
295 Ga0070709_10007763
296 Ga0070701_10015065
297 Ga0070701_10061602
298 Ga0070705_100003881
299 Ga0070705_100014968
300 Ga0070700_100013351
301 Ga0070694_100010064
302 Ga0070694_100011366
303 Ga0070694_100057946
304 Ga0070708_100038544
305 Ga0070708_100081681
306 Ga0070662_100037851
307 Ga0070706_100000195
308 Ga0070706_100008237
309 Ga0070706_100025859
310 Ga0070706_100168647
311 Ga0070706_100223408
312 Ga0070707_100001501
313 Ga0070707_100049469
314 Ga0070707_100106260
315 Ga0070698_100002097
316 Ga0070698_100003630
317 Ga0070699_100000014
318 Ga0070699_100001176
319 Ga0070699_100014883
320 Ga0070684_100167453
321 Ga0070697_100118663
322 Ga0068853_100046144
323 Ga0070686_100053701
324 Ga0070695_100004148
325 Ga0070695_100008083
326 Ga0070695_100041455
327 Ga0070696_100017268
328 Ga0070696_100036728
329 Ga0070693_100011823
330 Ga0068855_100009448
331 Ga0068857_100047829
332 Ga0068857_100080054
333 Ga0068852_100053157
334 Ga0068859_100018650
335 Ga0068861_100039214
336 Ga0068858_100119409
337 Ga0068860_100053880
338 Ga0068862_100053735
339 Ga0081455_10022907
340 Ga0081455_10047728
341 Ga0081538_10000001
342 Ga0081538_10000260
343 Ga0081538_10008482
344 Ga0081538_10008620
345 Ga0081538_10023095
346 Ga0081538_10026842
347 Ga0081539_10008138
348 Ga0081539_10009239
349 Ga0081539_10022592
350 Ga0081539_10030981
351 Ga0081539_10052943
352 Ga0070717_10000076
353 Ga0070717_10040661
354 Ga0075432_10004161
355 Ga0075430_100006521
356 Ga0075431_100023567
357 Ga0075431_100137137
358 Ga0075434_100284588
359 Ga0097620_100018650
360 Ga0075435_100069662
361 Ga0105240_10016111
362 Ga0105240_10214693
363 Ga0111539_10023560
364 Ga0111539_10025977
365 Ga0111539_10068629
366 Ga0111539_10097605
367 Ga0111539_10206589
368 Ga0105245_10062776
369 Ga0105245_10095752
370 Ga0114129_10000135
371 Ga0105243_10089798
372 Ga0105237_10002737
373 Ga0105238_10002025
374 Ga0105249_10019325
375 Ga0105030_100077
376 Ga0157369_10050252
377 Ga0157378_10005255
378 Ga0163162_10140415
379 Ga0163163_10129432
380 Ga0182008_10029537
381 Ga0157379_10017605
382 Ga0157379_10079319
383 Ga0157376_10077289
384 Ga0163161_10036306
385 Ga0163161_10068244
386 Ga0207647_10080018
387 Ga0207643_10042128
388 Ga0207684_10005206
389 Ga0207684_10008124
390 Ga0207684_10024067
391 Ga0207684_10046452
392 Ga0207684_10047896
393 Ga0207707_10092396
394 Ga0207707_10141368
395 Ga0207671_10000014
396 Ga0207660_10001788
397 Ga0207660_10021057
398 Ga0207649_10081534
399 Ga0207652_10011955
400 Ga0207652_10095601
401 Ga0207646_10001406
402 Ga0207646_10002416
403 Ga0207646_10003148
404 Ga0207646_10004190
405 Ga0207646_10204420
406 Ga0207646_10293821
407 Ga0207694_10002116
408 Ga0207706_10029541
409 Ga0207706_10100328
410 Ga0207669_10021240
411 Ga0207689_10130116
412 Ga0207667_10031480
413 Ga0207667_10077655
414 Ga0207712_10110627
415 Ga0207703_10178430
416 Ga0207678_10086387
417 Ga0207708_10001970
418 Ga0207648_10001899
419 Ga0207674_10006294
420 Ga0207674_10012710
421 Ga0207674_10096695
422 Ga0207675_100009358
423 Ga0207675_100021373
424 Ga0207698_10006258
425 Ga0207698_10072028
426 Ga0207428_10003081
427 Ga0268264_10037058
428 Ga0265319_1019597
429 Ga0265318_10015252
430 Ga0265338_10005476
431 Ga0265338_10015939
432 Ga0307405_10034113
433 Ga0307413_10005622
434 Ga0307413_10060229
435 Ga0307410_10038594
436 Ga0307406_10001744
437 Ga0307406_10012367
438 Ga0307407_10014494
439 Ga0307407_10140858
440 Ga0307412_10182136
441 Ga0307409_100001114
442 Ga0307409_100017463
443 Ga0307409_100024415
444 Ga0307416_100002273
445 Ga0307416_100009829
446 Ga0307416_100010105
447 Ga0307416_100035136
448 Ga0307416_100191269
449 Ga0307411_10016766
450 Ga0307415_100000597
451 Ga0307415_100001222
452 Ga0307415_100001668
453 Ga0307415_100002391
454 Ga0307415_100004420
455 Ga0307415_100005921
456 Ga0373955_0060737
457 Ga0395901_0059744
458 Ga0395901_0258686
459 Ga0436365_1283453
460 Ga0451853_1414464
461 Ga0439450_003065
462 Ga0439450_009432
463 Ga0439455_0019748
464 Ga0439456_004345
465 Ga0439444_0009484
466 Ga0439440_0002116
467 Ga0439440_0014027
468 Ga0453684_0000727
469 Ga0495651_0021880
470 Ga0495584_0020530
471 Ga0495656_0005276
472 Ga0495658_0088842
473 Ga0495669_0002448
474 Ga0495677_0023023
475 Ga0496102_0174345
476 Ga0496106_0110876
477 Ga0496108_0018154
478 Ga0496108_0061597
479 Ga0496109_0168974
480 Ga0496110_0098076
481 Ga0496111_0096168
482 Ga0496112_0000005
483 Ga0501031_0000856
484 Ga0501031_0003348
485 Ga0501031_0045822
486 Ga0501032_0021584
487 Ga0501033_0014204
488 Ga0501033_0036586
489 Ga0501036_0002559
490 Ga0501036_0034337
491 Ga0501037_0000617
492 Ga0501037_0034130
493 Ga0501037_0037141
494 Ga0501038_0001416
495 Ga0501038_0006742
496 Ga0501039_0000812
497 Ga0501039_0001235
498 Ga0501039_0058817
499 Ga0501040_0000361
500 Ga0501040_0000484
501 Ga0501040_0003106
502 Ga0501041_0000421
503 Ga0501041_0001923
504 Ga0501042_0000276
505 Ga0501042_0000462
506 Ga0501042_0022467
507 Ga0501043_0021896
508 Ga0501046_0005648
509 Ga0501046_0014377
510 Ga0501046_0018834
511 Ga0501047_0277765
512 Ga0501048_0000049
513 Ga0501048_0000949
514 Ga0501048_0023614
515 Ga0501067_0005375
516 Ga0501068_0015091
517 Ga0501068_0080579
518 Ga0501071_0000293
519 Ga0501071_0005975
520 Ga0501071_0007530
521 Ga0501072_0000113
522 Ga0501072_0002852
523 Ga0501072_0032081
524 Ga0501072_0039761
525 Ga0501074_0001917
526 Ga0501074_0020463
527 Ga0501074_0058014
528 Ga0501075_0000182
529 Ga0501075_0000596
530 Ga0501075_0030060
531 Ga0501075_0031347
532 Ga0501076_0000417
533 Ga0501076_0003917
534 Ga0501076_0084567
535 Ga0501076_0088491
536 Ga0501076_0157368
537 Ga0501077_0000774
538 Ga0501077_0001347
539 Ga0501079_0000293
540 Ga0501079_0001912
541 Ga0501079_0097255
542 Ga0501080_0013362
543 Ga0501080_0174344
544 Ga0501081_0001513
545 Ga0501081_0004591
546 Ga0501083_0067158
547 Ga0501035_0046858
548 Ga0501035_0055351
549 Ga0501035_0084532
550 Ga0501045_0001227
551 Ga0501045_0001559
552 Ga0501045_0002643
553 Ga0501045_0052096
554 nmdc:mga05p37_114606_c1
555 nmdc:mga05p37_44_c1
556 nmdc:mga09592_10199_c1
557 nmdc:mga0qj67_6770_c1
558 nmdc:mga06r32_16145_c1
559 nmdc:mga08y16_22615_c1
560 nmdc:mga0rr50_135834_c1
561 Ga0495595_0029461
562 Ga0500568_0000896
563 Ga0501084_0001961
564 Ga0501084_0005972
565 Ga0501082_0001141
566 Ga0501082_0004987
567 Ga0501082_0055157
568 Ga0530510_0000327
569 Ga0530510_0000353
570 Ga0530510_0029657
571 2873316864
572 2884702896
573 2895433988
574 2895443921
575 8055073546
576 8055177369

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

64

378

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tqo-assembly1.cif.gz_A structure of the cysteinyl-trna synthetase (cyss) from coxiella burnetii. 0.908 2 402
1li7-assembly1.cif.gz_A crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.8995 1 405
3c8z-assembly1.cif.gz_A the 1.6 a crystal structure of mshc: the rate limiting enzyme in the mycothiol biosynthetic pathway 0.8985 2 403
8qhp-assembly1.cif.gz_B cysteine trna ligase homodimer 0.8943 2 406
1li5-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase 0.8897 1 405
ID Description Score Start End Superfamily
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9655 1 318 3.40.50.620
af_C0PHQ1_15_336_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9642 2 318 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9624 1 318 3.40.50.620
af_A0A1D6M5V5_161_335_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9515 142 318 3.40.50.620
af_P9WFW1_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9506 2 315 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A535N9W1-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.97 2 320 GO:0004817
GO:0005524
GO:0005737
GO:0006423
AF-A0A3N5PRA2-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.9689 2 169 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A535H657-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.9677 2 399 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A3D4HKK4-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.9666 2 261 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A7W1LT67-F1-model_v4 Cysteine--tRNA ligase 0.966 1 173 GO:0004817
GO:0005524
GO:0005829
GO:0006423

Map