F388324

General Info

Members Datasets Scaffolds Average Seq Length
287 207 574 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8048406513|8048412758
Length 529
Sequence RTDAPYARTQRSLQGVQVSASRRKGAADALGPEEPEKNGPATGRSARSDDGEGPGHTDGTDGTDGTDHMDDIDHTDDIDTEDAMDSVDPGDADLLAALLDGMDAALCAFDADGVVTHWNREAERILGWSAEDAVGRRGFAGWAVRTADAEEIETRLMAAMHASGRQVHEFALVTKDGGRVLVRTQSAAVRGPDGKPAGLYCAFSEVHAQIDLERSIALSEALFEDASWGVVLVDADLRPAVVNAHAARSLGMGRTAVLGRPLGELLAQGVEEVESALAHVLAEGAPPAPAEIWVGVRTPDGEKRRCWRSGFLRLASPLAEEPVPLGVGWLFQDITETKQTEQEAALLRFRVNQLHRAARAAAECEDPGEAATVHLDFALAGFADHALIDRVAGTAPADDGPVRLVRVAATPSGAPGPSHLAGHAGIPVRYGRGHPALQCVERAGSVRASAGSAGPEAARDWAASRQWPPGTVHALCAVLRSRGRTLGVVTFLRGAGRTPFERTDSLYAEDVAVRIAAALDLEALGKAAR

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
7 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
8 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
9 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
10 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
13 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
14 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
15 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
16 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
20 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
21 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
22 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
25 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
26 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
27 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
28 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
29 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
33 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
34 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
35 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
36 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
39 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
40 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
41 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
42 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
43 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
65 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
66 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
70 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
71 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
72 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
73 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
74 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
75 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
91 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
92 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
93 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
101 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
106 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
110 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
127 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
128 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
129 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
130 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
131 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
133 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
134 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
135 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
136 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
137 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
138 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
139 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
140 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
141 2643221548 Streptomyces sp. Root55 Isolate Unclassified
142 2643221578 Streptomyces sp. Root63 Isolate Unclassified
143 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
144 2643221647 Streptomyces sp. Root369 Isolate Unclassified
145 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
146 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
147 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
148 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
149 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
150 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
151 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
152 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
153 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
154 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
155 2808606448 Streptomyces sp. 193411 Isolate Unclassified
156 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
157 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
158 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
159 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
160 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
161 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
162 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
163 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
164 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
165 2862574272 Streptomyces sp. AcE210 Isolate Nodule
166 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
167 2867475112 Streptomyces sp. TM32 Isolate Unclassified
168 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
169 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
170 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
171 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
172 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
173 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
174 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
175 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
176 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
177 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
178 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
179 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
180 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
181 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
182 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
183 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
184 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
185 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
186 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
187 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
188 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
189 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
190 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
191 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
192 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
193 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
194 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
195 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
196 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
197 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
198 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
199 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
200 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
201 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
202 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
203 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
204 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
205 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
206 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
207 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.52
Metatranscriptomes 0.35
Isolates 26.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.18
Nodule 0.7
Rhizoplane 0.7
Rhizosphere 73.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10014121 3300003316 Bacteria 4410
2 rootH1_10023547 3300003316 Bacteria 5665
3 rootH2_10072867 3300003320 Bacteria 4473
4 rootL2_10109407 3300003322 Bacteria 3023
5 Ga0006562J51391_1116082 3300003578 Bacteria 5710
6 Ga0068853_100120493 3300005539 Bacteria 2340
7 Ga0099826_10023928 3300006948 Bacteria 4543
8 Ga0105251_10006642 3300009011 Bacteria 7321
9 Ga0105245_10070686 3300009098 Bacteria 3168
10 Ga0105243_10121450 3300009148 Bacteria 2203
11 Ga0105238_10069575 3300009551 Bacteria 3520
12 Ga0105246_10000251 3300011119 Bacteria 27640
13 Ga0105246_10188081 3300011119 Bacteria 1596
14 Ga0182008_10015217 3300014497 Bacteria 4017
15 Ga0182007_10000374 3300015262 Bacteria 28125
16 Ga0183367_1005 3300015688 Bacteria 652063
17 Ga0213875_10004562 3300021388 Bacteria 7564
18 Ga0209758_1007919 3300025297 Bacteria 7052
19 Ga0207426_1002151 3300025302 Bacteria 13410
20 Ga0207426_1002193 3300025302 Bacteria 13159
21 Ga0207426_1003165 3300025302 Bacteria 9305
22 Ga0207426_1011169 3300025302 Bacteria 3440
23 Ga0207713_1021118 3300025735 Bacteria 3129
24 Ga0307517_10000838 3300028786 Bacteria 52894
25 Ga0307517_10013664 3300028786 Bacteria 11004
26 Ga0307515_10000933 3300028794 Bacteria 67151
27 Ga0307515_10044301 3300028794 Bacteria 6878
28 Ga0307511_10002973 3300030521 Bacteria 17554
29 Ga0307511_10024977 3300030521 Bacteria 5520
30 Ga0307512_10002861 3300030522 Bacteria 20972
31 Ga0307513_10009267 3300031456 Bacteria 12462
32 Ga0307509_10039731 3300031507 Bacteria 5123
33 Ga0307509_10040322 3300031507 Bacteria 5078
34 Ga0307509_10101677 3300031507 Bacteria 2908
35 Ga0307508_10003063 3300031616 Bacteria 17199
36 Ga0307508_10022767 3300031616 Bacteria 5695
37 Ga0307508_10043812 3300031616 Bacteria 4006
38 Ga0307508_10060716 3300031616 Bacteria 3342
39 Ga0307514_10015438 3300031649 Bacteria 6299
40 Ga0307514_10042667 3300031649 Bacteria 3566
41 Ga0307514_10066926 3300031649 Bacteria 2714
42 Ga0307514_10078636 3300031649 Bacteria 2448
43 Ga0307518_10064544 3300031838 Bacteria 2657
44 Ga0307507_10037236 3300033179 Bacteria 4954
45 Ga0307507_10058089 3300033179 Bacteria 3635
46 Ga0307510_10007071 3300033180 Bacteria 13374
47 Ga0307510_10029953 3300033180 Bacteria 6179
48 Ga0307510_10044399 3300033180 Bacteria 4814
49 Ga0395900_0113409 3300037418 Bacteria 2782
50 Ga0395898_0001694 3300037466 Bacteria 29452
51 Ga0395898_0004050 3300037466 Bacteria 16108
52 Ga0436364_1409655 3300037853 Bacteria 10025
53 Ga0395901_0031822 3300038443 Bacteria 5439
54 Ga0439436_0002007 3300041404 Bacteria 6045
55 Ga0439436_0005457 3300041404 Bacteria 3893
56 Ga0439439_0004980 3300041406 Bacteria 3014
57 Ga0439448_0002492 3300042005 Bacteria 5016
58 Ga0439449_0006052 3300042007 Bacteria 4623
59 Ga0439457_000064 3300042014 Bacteria 22792
60 Ga0439457_000499 3300042014 Bacteria 11375
61 Ga0450894_000707 3300042131 Bacteria 5535
62 Ga0450900_000780 3300042136 Bacteria 2763
63 Ga0450903_000074 3300042138 Bacteria 20108
64 Ga0439458_0005122 3300042157 Bacteria 2955
65 Ga0439458_0014324 3300042157 Bacteria 1789
66 Ga0466972_0006705 3300044658 Bacteria 5778
67 Ga0466972_0012618 3300044658 Bacteria 4245
68 Ga0466966_0008260 3300044684 Bacteria 6903
69 Ga0466966_0033532 3300044684 Bacteria 3324
70 Ga0466961_0003043 3300044693 Bacteria 10403
71 Ga0466961_0042630 3300044693 Bacteria 2908
72 Ga0466961_0059389 3300044693 Bacteria 2432
73 Ga0466963_0009950 3300044694 Bacteria 5743
74 Ga0466964_0001021 3300044706 Bacteria 9314
75 Ga0466971_0000141 3300044719 Bacteria 26725
76 Ga0466971_0014148 3300044719 Bacteria 3508
77 Ga0466968_0026666 3300044735 Bacteria 2373
78 Ga0466970_0000600 3300044765 Bacteria 17664
79 Ga0466970_0007711 3300044765 Bacteria 5400
80 Ga0466957_0000909 3300044842 Bacteria 15150
81 Ga0466960_0006581 3300044901 Bacteria 4667
82 Ga0466959_0000556 3300045049 Bacteria 21663
83 Ga0466959_0014829 3300045049 Bacteria 5674
84 Ga0466959_0117987 3300045049 Bacteria 1889
85 Ga0466958_0026068 3300045836 Bacteria 3452
86 Ga0466967_0004300 3300045976 Bacteria 9577
87 Ga0466967_0158246 3300045976 Bacteria 2124
88 Ga0466967_0309962 3300045976 Bacteria 1520
89 Ga0495592_0000781 3300046454 Bacteria 22116
90 Ga0495592_0013167 3300046454 Bacteria 6295
91 Ga0495603_0001872 3300046455 Bacteria 12400
92 Ga0495603_0001919 3300046455 Bacteria 12261
93 Ga0495603_0002370 3300046455 Bacteria 11066
94 Ga0495603_0007289 3300046455 Bacteria 6648
95 Ga0495603_0021425 3300046455 Bacteria 3914
96 Ga0495629_0000980 3300046459 Bacteria 22904
97 Ga0495629_0001258 3300046459 Bacteria 19910
98 Ga0495629_0006704 3300046459 Bacteria 8514
99 Ga0495638_0070902 3300046460 Bacteria 2132
100 Ga0495651_0003910 3300046462 Bacteria 11392
101 Ga0495582_0030207 3300046473 Bacteria 2974
102 Ga0495582_0031773 3300046473 Bacteria 2903
103 Ga0495605_0006550 3300046474 Bacteria 6681
104 Ga0495662_0000880 3300046476 Bacteria 14678
105 Ga0495662_0009962 3300046476 Bacteria 4668
106 Ga0495584_0020992 3300046491 Bacteria 3317
107 Ga0495594_0000134 3300046499 Bacteria 34789
108 Ga0495594_0007483 3300046499 Bacteria 5622
109 Ga0495594_0073218 3300046499 Bacteria 1906
110 Ga0495607_0012431 3300046501 Bacteria 5618
111 Ga0495606_0005509 3300046507 Bacteria 12096
112 Ga0495618_0008786 3300046514 Bacteria 6100
113 Ga0495620_0032299 3300046515 Bacteria 2386
114 Ga0495628_0017249 3300046516 Bacteria 6012
115 Ga0495628_0119099 3300046516 Bacteria 2026
116 Ga0495631_0007727 3300046518 Bacteria 5456
117 Ga0495632_0028124 3300046519 Bacteria 2937
118 Ga0495643_0001190 3300046522 Bacteria 25345
119 Ga0495643_0037122 3300046522 Bacteria 2674
120 Ga0495666_0012861 3300046526 Bacteria 4171
121 Ga0495654_0020057 3300046530 Bacteria 3489
122 Ga0495640_0001429 3300046533 Bacteria 18812
123 Ga0495640_0024618 3300046533 Bacteria 4378
124 Ga0495640_0048880 3300046533 Bacteria 2919
125 Ga0495609_0008250 3300046538 Bacteria 5114
126 Ga0495645_0007236 3300046543 Bacteria 7724
127 Ga0495667_0021112 3300046559 Bacteria 4393
128 Ga0495634_0010410 3300046642 Bacteria 6814
129 Ga0495634_0022361 3300046642 Bacteria 4456
130 Ga0495634_0022655 3300046642 Bacteria 4424
131 Ga0495611_0026446 3300046648 Bacteria 2531
132 Ga0495625_0098970 3300046660 Bacteria 2005
133 Ga0495661_0030827 3300046665 Bacteria 3411
134 Ga0495588_0011856 3300046674 Bacteria 4103
135 Ga0495657_0003014 3300046675 Bacteria 13926
136 Ga0495657_0017155 3300046675 Bacteria 5261
137 Ga0495646_0000479 3300046680 Bacteria 21264
138 Ga0495658_0009531 3300046683 Bacteria 4842
139 Ga0495613_0005626 3300046689 Bacteria 9405
140 Ga0495613_0006157 3300046689 Bacteria 8981
141 Ga0495613_0014102 3300046689 Bacteria 5928
142 Ga0495613_0077488 3300046689 Bacteria 2418
143 Ga0495624_0029487 3300046690 Bacteria 3580
144 Ga0495649_0018675 3300046694 Bacteria 3897
145 Ga0495649_0021331 3300046694 Bacteria 3630
146 Ga0495589_0015876 3300046794 Bacteria 3871
147 Ga0495600_0010927 3300046809 Bacteria 5646
148 Ga0495600_0028704 3300046809 Bacteria 3600
149 Ga0495600_0030706 3300046809 Bacteria 3480
150 Ga0495660_0039316 3300046810 Bacteria 2627
151 Ga0495581_0006435 3300047315 Bacteria 6816
152 Ga0495581_0043175 3300047315 Bacteria 2608
153 Ga0495604_0001421 3300047317 Bacteria 19651
154 Ga0495604_0077708 3300047317 Bacteria 2493
155 Ga0495636_0002577 3300047318 Bacteria 6970
156 Ga0495676_0001645 3300047321 Bacteria 19489
157 Ga0495676_0003313 3300047321 Bacteria 14559
158 Ga0495676_0006406 3300047321 Bacteria 10846
159 Ga0495676_0013297 3300047321 Bacteria 7397
160 Ga0495676_0013807 3300047321 Bacteria 7240
161 Ga0495676_0106327 3300047321 Bacteria 2067
162 Ga0495687_000974 3300047443 Bacteria 29055
163 Ga0495687_002280 3300047443 Bacteria 15696
164 Ga0495675_0049774 3300047444 Bacteria 2663
165 Ga0495685_000278 3300047447 Bacteria 17179
166 Ga0495685_003835 3300047447 Bacteria 4815
167 Ga0495681_0000288 3300047470 Bacteria 40169
168 Ga0495681_0001169 3300047470 Bacteria 19938
169 Ga0495684_0030114 3300047471 Bacteria 4167
170 Ga0495593_0000286 3300047673 Bacteria 27471
171 Ga0495593_0020167 3300047673 Bacteria 3734
172 Ga0495593_0070723 3300047673 Bacteria 1812
173 Ga0495602_0035015 3300048088 Bacteria 4687
174 Ga0495614_0002962 3300048089 Bacteria 7567
175 Ga0495614_0012754 3300048089 Bacteria 3687
176 Ga0495626_0013863 3300048091 Bacteria 4175
177 Ga0496106_0010321 3300048909 Bacteria 6904
178 Ga0496108_0058350 3300048911 Bacteria 3244
179 Ga0495678_016567 3300049459 Bacteria 3365
180 Ga0495682_0044072 3300049460 Bacteria 1633
181 Ga0501033_0006406 3300049570 Bacteria 9219
182 Ga0501033_0056594 3300049570 Bacteria 2898
183 Ga0501033_0077623 3300049570 Bacteria 2437
184 Ga0501034_0007138 3300049571 Bacteria 11920
185 Ga0501036_0003610 3300049572 Bacteria 12367
186 Ga0501038_0002790 3300049574 Bacteria 16256
187 Ga0501046_0051055 3300049580 Bacteria 3265
188 Ga0501047_0004991 3300049581 Bacteria 12455
189 Ga0501047_0203434 3300049581 Bacteria 1840
190 Ga0501047_0216467 3300049581 Bacteria 1772
191 Ga0501048_0083171 3300049582 Bacteria 2257
192 Ga0501070_0000381 3300049586 Bacteria 40532
193 Ga0501074_0017233 3300049590 Bacteria 5241
194 Ga0501080_0060036 3300049742 Bacteria 3539
195 Ga0501035_0063260 3300049822 Bacteria 3291
196 Ga0501044_0000276 3300049823 Bacteria 65263
197 Ga0501044_0002138 3300049823 Bacteria 22638
198 Ga0501044_0020128 3300049823 Bacteria 7123
199 Ga0501044_0023635 3300049823 Bacteria 6535
200 Ga0501044_0057164 3300049823 Bacteria 4003
201 nmdc:mga0yw44_182639_c1 3300050492 Bacteria 1381
202 Ga0495601_0117609 3300053077 Bacteria 1725
203 Ga0495619_0111351 3300053085 Bacteria 1871
204 Ga0500644_0028176 3300053088 Bacteria 1754
205 Ga0500640_003019 3300053095 Bacteria 5747
206 Ga0500569_010034 3300053109 Bacteria 2217
207 Ga0500652_001166 3300053131 Bacteria 8387
208 Ga0500561_0001443 3300053137 Bacteria 3859
209 Ga0500600_0022385 3300053149 Bacteria 3782
210 Ga0466962_0000057 3300061719 Bacteria 46351
211 Ga0466962_0001194 3300061719 Bacteria 11932
212 Ga0466962_0026826 3300061719 Bacteria 2766
213 8048412758 8048406513 Bacteria 8936924
214 2547408110 2547132111 Bacteria 8013147
215 2554257869 2554235005 Bacteria 6457341
216 2585299339 2582581312 Bacteria 7308206
217 2585308788 2582581313 Bacteria 10042643
218 2585313484 2582581314 Bacteria 11452267
219 2616695077 2616644814 Bacteria 11555299
220 2616902138 2616644941 Bacteria 8510691
221 2643764913 2643221548 Bacteria 8053412
222 2643902657 2643221578 Bacteria 9213798
223 2643942168 2643221587 Bacteria 7586415
224 2644262274 2643221647 Bacteria 10741251
225 2644404835 2643221673 Bacteria 9196637
226 2644429251 2643221677 Bacteria 7584031
227 2644437161 2643221678 Bacteria 9540101
228 2644461247 2643221682 Bacteria 6743283
229 2785343318 2784746763 Bacteria 9783172
230 2785369498 2784746768 Bacteria 10036182
231 2786670602 2786546132 Bacteria 10419719
232 2804847061 2802429296 Bacteria 7227771
233 2808842057 2808606359 Bacteria 9866990
234 2808920572 2808606375 Bacteria 9466072
235 2809232174 2808606448 Bacteria 8656184
236 2811849043 2808606982 Bacteria 7791042
237 2812358111 2811994879 Bacteria 9313447
238 2812480530 2811994917 Bacteria 7761064
239 2819695362 2818991463 Bacteria 7948711
240 2852636680 2852635781 Bacteria 8251373
241 2862181831 2862178590 Bacteria 8583590
242 2862285645 2862281513 Bacteria 9621493
243 2862295494 2862290372 Bacteria 7471434
244 2862512226 2862507626 Bacteria 9425308
245 2862579257 2862574272 Bacteria 10567477
246 2863404618 2863404153 Bacteria 9672205
247 2867475582 2867475112 Bacteria 6909112
248 2873155734 2873151551 Bacteria 8625867
249 2875395812 2875391855 Bacteria 7600475
250 2877681111 2877676314 Bacteria 9512378
251 2912724348 2912723979 Bacteria 8557534
252 2912760777 2912757875 Bacteria 7940295
253 2918505646 2918501144 Bacteria 8668083
254 2919469517 2919468124 Bacteria 9133025
255 2935393416 2935390628 Bacteria 7043367
256 2946048811 2946045630 Bacteria 8527308
257 2946067730 2946064051 Bacteria 8957905
258 2947229237 2947224130 Bacteria 9938529
259 2954007415 2954002825 Bacteria 9173742
260 2954386244 2954380949 Bacteria 10050426
261 2954676922 2954673503 Bacteria 9685905
262 2954687236 2954682443 Bacteria 9862841
263 2954696878 2954691527 Bacteria 10720516
264 2954705258 2954701450 Bacteria 10834262
265 2954716254 2954711539 Bacteria 10867210
266 2954735615 2954731030 Bacteria 10243860
267 2954745121 2954740390 Bacteria 10229294
268 2954754470 2954749733 Bacteria 10366972
269 2954764095 2954759201 Bacteria 9358192
270 2966601596 2966598605 Bacteria 7676064
271 2990066433 2990059506 Bacteria 9321252
272 2990088916 2990088156 Bacteria 6657676
273 2997457849 2997451912 Bacteria 8492419
274 2997600416 2997600082 Bacteria 9896405
275 3006325038 3006321560 Bacteria 8247479
276 3006428694 3006425503 Bacteria 6491253
277 3006488603 3006486233 Bacteria 8157040
278 3006500756 3006493962 Bacteria 8825450
279 8008578893 8008574985 Bacteria 7815457
280 8023630793 8023623736 Bacteria 8593882
281 8025417685 8025413630 Bacteria 7014048
282 8025480358 8025478263 Bacteria 8209203
283 8025538049 8025530807 Bacteria 8495698
284 8054166661 8054160619 Bacteria 7783213
285 8056451065 8056447290 Bacteria 7680491
286 8056669638 8056667051 Bacteria 6953971
287 8056831703 8056829672 Bacteria 9045328
288 rootH1_10014121
289 rootH1_10023547
290 rootH2_10072867
291 rootL2_10109407
292 Ga0006562J51391_1116082
293 Ga0068853_100120493
294 Ga0099826_10023928
295 Ga0105251_10006642
296 Ga0105245_10070686
297 Ga0105243_10121450
298 Ga0105238_10069575
299 Ga0105246_10000251
300 Ga0105246_10188081
301 Ga0182008_10015217
302 Ga0182007_10000374
303 Ga0183367_1005
304 Ga0213875_10004562
305 Ga0209758_1007919
306 Ga0207426_1002151
307 Ga0207426_1002193
308 Ga0207426_1003165
309 Ga0207426_1011169
310 Ga0207713_1021118
311 Ga0307517_10000838
312 Ga0307517_10013664
313 Ga0307515_10000933
314 Ga0307515_10044301
315 Ga0307511_10002973
316 Ga0307511_10024977
317 Ga0307512_10002861
318 Ga0307513_10009267
319 Ga0307509_10039731
320 Ga0307509_10040322
321 Ga0307509_10101677
322 Ga0307508_10003063
323 Ga0307508_10022767
324 Ga0307508_10043812
325 Ga0307508_10060716
326 Ga0307514_10015438
327 Ga0307514_10042667
328 Ga0307514_10066926
329 Ga0307514_10078636
330 Ga0307518_10064544
331 Ga0307507_10037236
332 Ga0307507_10058089
333 Ga0307510_10007071
334 Ga0307510_10029953
335 Ga0307510_10044399
336 Ga0395900_0113409
337 Ga0395898_0001694
338 Ga0395898_0004050
339 Ga0436364_1409655
340 Ga0395901_0031822
341 Ga0439436_0002007
342 Ga0439436_0005457
343 Ga0439439_0004980
344 Ga0439448_0002492
345 Ga0439449_0006052
346 Ga0439457_000064
347 Ga0439457_000499
348 Ga0450894_000707
349 Ga0450900_000780
350 Ga0450903_000074
351 Ga0439458_0005122
352 Ga0439458_0014324
353 Ga0466972_0006705
354 Ga0466972_0012618
355 Ga0466966_0008260
356 Ga0466966_0033532
357 Ga0466961_0003043
358 Ga0466961_0042630
359 Ga0466961_0059389
360 Ga0466963_0009950
361 Ga0466964_0001021
362 Ga0466971_0000141
363 Ga0466971_0014148
364 Ga0466968_0026666
365 Ga0466970_0000600
366 Ga0466970_0007711
367 Ga0466957_0000909
368 Ga0466960_0006581
369 Ga0466959_0000556
370 Ga0466959_0014829
371 Ga0466959_0117987
372 Ga0466958_0026068
373 Ga0466967_0004300
374 Ga0466967_0158246
375 Ga0466967_0309962
376 Ga0495592_0000781
377 Ga0495592_0013167
378 Ga0495603_0001872
379 Ga0495603_0001919
380 Ga0495603_0002370
381 Ga0495603_0007289
382 Ga0495603_0021425
383 Ga0495629_0000980
384 Ga0495629_0001258
385 Ga0495629_0006704
386 Ga0495638_0070902
387 Ga0495651_0003910
388 Ga0495582_0030207
389 Ga0495582_0031773
390 Ga0495605_0006550
391 Ga0495662_0000880
392 Ga0495662_0009962
393 Ga0495584_0020992
394 Ga0495594_0000134
395 Ga0495594_0007483
396 Ga0495594_0073218
397 Ga0495607_0012431
398 Ga0495606_0005509
399 Ga0495618_0008786
400 Ga0495620_0032299
401 Ga0495628_0017249
402 Ga0495628_0119099
403 Ga0495631_0007727
404 Ga0495632_0028124
405 Ga0495643_0001190
406 Ga0495643_0037122
407 Ga0495666_0012861
408 Ga0495654_0020057
409 Ga0495640_0001429
410 Ga0495640_0024618
411 Ga0495640_0048880
412 Ga0495609_0008250
413 Ga0495645_0007236
414 Ga0495667_0021112
415 Ga0495634_0010410
416 Ga0495634_0022361
417 Ga0495634_0022655
418 Ga0495611_0026446
419 Ga0495625_0098970
420 Ga0495661_0030827
421 Ga0495588_0011856
422 Ga0495657_0003014
423 Ga0495657_0017155
424 Ga0495646_0000479
425 Ga0495658_0009531
426 Ga0495613_0005626
427 Ga0495613_0006157
428 Ga0495613_0014102
429 Ga0495613_0077488
430 Ga0495624_0029487
431 Ga0495649_0018675
432 Ga0495649_0021331
433 Ga0495589_0015876
434 Ga0495600_0010927
435 Ga0495600_0028704
436 Ga0495600_0030706
437 Ga0495660_0039316
438 Ga0495581_0006435
439 Ga0495581_0043175
440 Ga0495604_0001421
441 Ga0495604_0077708
442 Ga0495636_0002577
443 Ga0495676_0001645
444 Ga0495676_0003313
445 Ga0495676_0006406
446 Ga0495676_0013297
447 Ga0495676_0013807
448 Ga0495676_0106327
449 Ga0495687_000974
450 Ga0495687_002280
451 Ga0495675_0049774
452 Ga0495685_000278
453 Ga0495685_003835
454 Ga0495681_0000288
455 Ga0495681_0001169
456 Ga0495684_0030114
457 Ga0495593_0000286
458 Ga0495593_0020167
459 Ga0495593_0070723
460 Ga0495602_0035015
461 Ga0495614_0002962
462 Ga0495614_0012754
463 Ga0495626_0013863
464 Ga0496106_0010321
465 Ga0496108_0058350
466 Ga0495678_016567
467 Ga0495682_0044072
468 Ga0501033_0006406
469 Ga0501033_0056594
470 Ga0501033_0077623
471 Ga0501034_0007138
472 Ga0501036_0003610
473 Ga0501038_0002790
474 Ga0501046_0051055
475 Ga0501047_0004991
476 Ga0501047_0203434
477 Ga0501047_0216467
478 Ga0501048_0083171
479 Ga0501070_0000381
480 Ga0501074_0017233
481 Ga0501080_0060036
482 Ga0501035_0063260
483 Ga0501044_0000276
484 Ga0501044_0002138
485 Ga0501044_0020128
486 Ga0501044_0023635
487 Ga0501044_0057164
488 nmdc:mga0yw44_182639_c1
489 Ga0495601_0117609
490 Ga0495619_0111351
491 Ga0500644_0028176
492 Ga0500640_003019
493 Ga0500569_010034
494 Ga0500652_001166
495 Ga0500561_0001443
496 Ga0500600_0022385
497 Ga0466962_0000057
498 Ga0466962_0001194
499 Ga0466962_0026826
500 8048412758
501 2547408110
502 2554257869
503 2585299339
504 2585308788
505 2585313484
506 2616695077
507 2616902138
508 2643764913
509 2643902657
510 2643942168
511 2644262274
512 2644404835
513 2644429251
514 2644437161
515 2644461247
516 2785343318
517 2785369498
518 2786670602
519 2804847061
520 2808842057
521 2808920572
522 2809232174
523 2811849043
524 2812358111
525 2812480530
526 2819695362
527 2852636680
528 2862181831
529 2862285645
530 2862295494
531 2862512226
532 2862579257
533 2863404618
534 2867475582
535 2873155734
536 2875395812
537 2877681111
538 2912724348
539 2912760777
540 2918505646
541 2919469517
542 2935393416
543 2946048811
544 2946067730
545 2947229237
546 2954007415
547 2954386244
548 2954676922
549 2954687236
550 2954696878
551 2954705258
552 2954716254
553 2954735615
554 2954745121
555 2954754470
556 2954764095
557 2966601596
558 2990066433
559 2990088916
560 2997457849
561 2997600416
562 3006325038
563 3006428694
564 3006488603
565 3006500756
566 8008578893
567 8023630793
568 8025417685
569 8025480358
570 8025538049
571 8054166661
572 8056451065
573 8056669638
574 8056831703

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08447

PAS_3

PAS fold

115

202

0.94

PF00989

PAS

PAS fold

93

206

0.88

PF08448

PAS_4

PAS fold

223

339

0.84

PF08448

PAS_4

PAS fold

99

210

0.83

PF13426

PAS_9

PAS domain

103

207

0.8

PF13188

PAS_8

PAS domain

93

158

0.77

PF13426

PAS_9

PAS domain

227

336

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5iu1-assembly1.cif.gz_B n-terminal pas domain homodimer of ppanr map3k from physcomitrella patens. 0.8922 38 138
5iu1-assembly1.cif.gz_A n-terminal pas domain homodimer of ppanr map3k from physcomitrella patens. 0.8921 36 138
4pky-assembly2.cif.gz_D arnt/hif transcription factor/coactivator complex 0.8898 38 140
3lyx-assembly1.cif.gz_A crystal structure of the pas domain of the protein cps_1291 from colwellia psychrerythraea. northeast structural genomics consortium target id csr222b 0.886 27 143
4pky-assembly1.cif.gz_A arnt/hif transcription factor/coactivator complex 0.8831 38 140
ID Description Score Start End Superfamily
af_I1KMQ9_125_227_3.30.450.20 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.9016 38 141 3.30.450.20
5iu1A00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.8921 36 138 3.30.450.20
3lyxA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.886 27 143 3.30.450.20
af_I1KMQ9_125_227_3.30.450.20 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.8856 38 141 3.30.450.20
af_A0A1D6GGX9_750_875_3.30.450.20 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.8693 38 140 3.30.450.20
ID Description Score Start End GO Terms
AF-A0A2D6QY64-F1-model_v4 PAS domain-containing protein 0.8713 27 145 GO:0006355
AF-A0A7C3Q3W9-F1-model_v4 PAS domain S-box protein 0.8434 23 139 GO:0005524
GO:0006355
GO:0016887
AF-A0A1S7LEE1-F1-model_v4 Anti-sigma factor antagonist 0.8379 27 143
AF-A0A3B3BWN1-F1-model_v4 Phosphodiesterase (EC 3.1.4.-) 0.8339 27 145 GO:0004115
GO:0005634
GO:0006198
GO:0006355
GO:0007165
GO:0046872
AF-A0A2H0HC51-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8135 27 159 GO:0000155
GO:0000156
GO:0006355
GO:0007234
GO:0016020
GO:0030295

Map