F388042

General Info

Members Datasets Scaffolds Average Seq Length
287 189 574 134

Family's Representative Sequence

Representative Sequence 3300025922|Ga0207646_10082813|Ga0207646_100828133
Length 149
Sequence MPTRRRSSVSEMRIPADTQALIEDALHRALEARDRAYAPYSGFRVGAAIIAGGRVFTGQNIENASYPVSVCAERNAVARMIDEGEHRIDAVAVVTGADEPTPPCGACRQVLWEFGREALVVAETTSGRRATWALEDLLPSAFGPEDLDR

Samples

Sample ID Description Type Environment
1 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
108 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
115 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
116 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
119 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
120 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
123 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
124 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
173 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
177 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.74
Nodule 0
Rhizoplane 6.62
Rhizosphere 88.5
Stem 0
Stem Tuber 0
Unclassified 7.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207646_10082813 3300025922 Bacteria 2869
2 JGI24751J29686_10013659 3300002459 Bacteria 1676
3 Ga0065712_10429988 3300005290 Bacteria 704
4 Ga0065715_10105042 3300005293 Bacteria 2918
5 Ga0065715_10198028 3300005293 Bacteria 1367
6 Ga0065707_10523290 3300005295 Bacteria 740
7 Ga0070670_100012095 3300005331 Bacteria 7380
8 Ga0068869_100722280 3300005334 Bacteria 851
9 Ga0070680_100286149 3300005336 Bacteria 1397
10 Ga0070682_100315717 3300005337 Unclassified 1152
11 Ga0070660_100033379 3300005339 Bacteria 3880
12 Ga0070689_100615087 3300005340 Bacteria 942
13 Ga0070689_101167824 3300005340 Bacteria 690
14 Ga0070674_100071530 3300005356 Bacteria 2454
15 Ga0070709_10329843 3300005434 Bacteria 1122
16 Ga0070701_10175725 3300005438 Bacteria 1250
17 Ga0070711_100281378 3300005439 Bacteria 1316
18 Ga0070705_100125399 3300005440 Bacteria 1665
19 Ga0070705_100131403 3300005440 Bacteria 1634
20 Ga0070700_100256128 3300005441 Bacteria 1258
21 Ga0070700_100981027 3300005441 Bacteria 693
22 Ga0070700_101648481 3300005441 Bacteria 549
23 Ga0070694_100105075 3300005444 Bacteria 2004
24 Ga0070694_100261120 3300005444 Bacteria 1314
25 Ga0070708_100666070 3300005445 Bacteria 980
26 Ga0070708_100701999 3300005445 Bacteria 952
27 Ga0070678_101465211 3300005456 Bacteria 638
28 Ga0070678_101703191 3300005456 Unclassified 593
29 Ga0070681_10043729 3300005458 Bacteria 4485
30 Ga0070685_10256428 3300005466 Bacteria 1161
31 Ga0070707_100097944 3300005468 Bacteria 2841
32 Ga0070707_100267779 3300005468 Bacteria 1661
33 Ga0070698_101704696 3300005471 Unclassified 583
34 Ga0070679_100110419 3300005530 Bacteria 2736
35 Ga0070679_100926358 3300005530 Bacteria 815
36 Ga0070697_100061710 3300005536 Bacteria 3058
37 Ga0070697_101139110 3300005536 Bacteria 695
38 Ga0070686_100464195 3300005544 Bacteria 976
39 Ga0070696_100026708 3300005546 Bacteria 3928
40 Ga0070696_100068682 3300005546 Bacteria 2488
41 Ga0070693_100626818 3300005547 Unclassified 779
42 Ga0070693_101300315 3300005547 Bacteria 562
43 Ga0070704_100447453 3300005549 Bacteria 1112
44 Ga0070704_100683635 3300005549 Bacteria 909
45 Ga0070664_100625946 3300005564 Bacteria 999
46 Ga0068857_100214203 3300005577 Bacteria 1758
47 Ga0068859_100014446 3300005617 Bacteria 7924
48 Ga0068859_100223921 3300005617 Bacteria 1969
49 Ga0068859_102571207 3300005617 Bacteria 560
50 Ga0068864_100065817 3300005618 Bacteria 3144
51 Ga0068866_10095898 3300005718 Bacteria 1626
52 Ga0068863_100492272 3300005841 Bacteria 1207
53 Ga0068863_100937620 3300005841 Bacteria 867
54 Ga0081455_10730254 3300005937 Bacteria 628
55 Ga0081538_10117789 3300005981 Bacteria 1285
56 Ga0075367_10083824 3300006178 Bacteria 1932
57 Ga0068871_101704617 3300006358 Unclassified 598
58 Ga0075433_10080166 3300006852 Bacteria 2877
59 Ga0075434_100006816 3300006871 Bacteria 10508
60 Ga0075434_100363532 3300006871 Bacteria 1468
61 Ga0068865_100077114 3300006881 Bacteria 2381
62 Ga0075436_100099025 3300006914 Bacteria 2029
63 Ga0097620_100014447 3300006931 Bacteria 7924
64 Ga0097620_100223898 3300006931 Bacteria 1969
65 Ga0097620_100327486 3300006931 Bacteria 1626
66 Ga0097620_102571576 3300006931 Bacteria 560
67 Ga0075435_100045343 3300007076 Bacteria 3524
68 Ga0111539_10019103 3300009094 Bacteria 8469
69 Ga0111539_10274298 3300009094 Bacteria 1963
70 Ga0105247_10011329 3300009101 Bacteria 5379
71 Ga0114129_10008808 3300009147 Bacteria 14398
72 Ga0114129_12665766 3300009147 Bacteria 596
73 Ga0105243_10009348 3300009148 Bacteria 7473
74 Ga0105243_10161501 3300009148 Bacteria 1932
75 Ga0105243_12614122 3300009148 Bacteria 545
76 Ga0105242_10016056 3300009176 Bacteria 5817
77 Ga0105248_10622707 3300009177 Bacteria 1218
78 Ga0105248_10932556 3300009177 Bacteria 981
79 Ga0105249_10607852 3300009553 Bacteria 1148
80 Ga0105249_10941770 3300009553 Bacteria 931
81 Ga0105239_12146070 3300010375 Bacteria 649
82 Ga0163162_10128575 3300013306 Bacteria 2641
83 Ga0163162_10645064 3300013306 Bacteria 1183
84 Ga0163162_11361492 3300013306 Bacteria 807
85 Ga0157375_11202203 3300013308 Bacteria 889
86 Ga0163163_12008907 3300014325 Bacteria 638
87 Ga0157380_10113140 3300014326 Bacteria 2285
88 Ga0157380_10425402 3300014326 Bacteria 1268
89 Ga0157380_11511462 3300014326 Bacteria 725
90 Ga0163161_10254241 3300017792 Bacteria 1370
91 Ga0213875_10530512 3300021388 Bacteria 567
92 Ga0207642_10106168 3300025899 Bacteria 1421
93 Ga0207710_10011798 3300025900 Bacteria 3675
94 Ga0207685_10125018 3300025905 Bacteria 1134
95 Ga0207699_10108134 3300025906 Unclassified 1778
96 Ga0207699_10886971 3300025906 Bacteria 658
97 Ga0207707_10235069 3300025912 Bacteria 1594
98 Ga0207660_10319238 3300025917 Bacteria 1240
99 Ga0207657_10043335 3300025919 Bacteria 3965
100 Ga0207657_10623471 3300025919 Unclassified 841
101 Ga0207652_11361636 3300025921 Unclassified 613
102 Ga0207646_10226280 3300025922 Bacteria 1690
103 Ga0207650_10024238 3300025925 Bacteria 4311
104 Ga0207706_10545905 3300025933 Bacteria 998
105 Ga0207686_10156272 3300025934 Bacteria 1594
106 Ga0207709_10045125 3300025935 Bacteria 2668
107 Ga0207709_10458489 3300025935 Bacteria 987
108 Ga0207670_11166327 3300025936 Unclassified 651
109 Ga0207669_10326067 3300025937 Bacteria 1177
110 Ga0207669_10349350 3300025937 Bacteria 1142
111 Ga0207704_10023931 3300025938 Bacteria 3301
112 Ga0207665_10071077 3300025939 Bacteria 2375
113 Ga0207665_11676858 3300025939 Unclassified 503
114 Ga0207711_10316528 3300025941 Bacteria 1441
115 Ga0207679_10648558 3300025945 Unclassified 955
116 Ga0207712_12111826 3300025961 Unclassified 504
117 Ga0207677_11207830 3300026023 Bacteria 692
118 Ga0207708_10339020 3300026075 Bacteria 1231
119 Ga0207641_10286881 3300026088 Bacteria 1550
120 Ga0207648_10015970 3300026089 Bacteria 6879
121 Ga0207674_10161117 3300026116 Bacteria 2198
122 Ga0207674_11248191 3300026116 Bacteria 713
123 Ga0207675_100233113 3300026118 Bacteria 1777
124 Ga0207683_10836309 3300026121 Bacteria 855
125 Ga0207683_11296003 3300026121 Bacteria 674
126 Ga0207683_11413836 3300026121 Unclassified 643
127 Ga0207428_10257663 3300027907 Bacteria 1300
128 Ga0268264_10140352 3300028381 Bacteria 2154
129 Ga0268264_12197725 3300028381 Unclassified 560
130 Ga0307405_10000780 3300031731 Bacteria 12489
131 Ga0307405_10095893 3300031731 Bacteria 1976
132 Ga0307413_10055279 3300031824 Bacteria 2414
133 Ga0307413_10137645 3300031824 Bacteria 1682
134 Ga0307410_10014141 3300031852 Bacteria 4683
135 Ga0307410_10041924 3300031852 Bacteria 3021
136 Ga0307406_10158863 3300031901 Bacteria 1622
137 Ga0307406_10808078 3300031901 Bacteria 792
138 Ga0307407_10000683 3300031903 Bacteria 10967
139 Ga0307407_10021007 3300031903 Bacteria 3357
140 Ga0307412_10024068 3300031911 Bacteria 3755
141 Ga0307412_10043640 3300031911 Bacteria 2921
142 Ga0307412_10788103 3300031911 Bacteria 824
143 Ga0307412_10864536 3300031911 Bacteria 790
144 Ga0307409_100241916 3300031995 Bacteria 1643
145 Ga0307416_100141176 3300032002 Bacteria 2189
146 Ga0307414_10566537 3300032004 Unclassified 1014
147 Ga0307411_10230040 3300032005 Bacteria 1444
148 Ga0373937_0234131 3300036401 Bacteria 1730
149 Ga0395905_0314719 3300037471 Unclassified 1454
150 Ga0436364_0711443 3300037853 Bacteria 702
151 Ga0439448_0166477 3300042005 Bacteria 768
152 Ga0466966_0406598 3300044684 Bacteria 818
153 Ga0466967_0616105 3300045976 Bacteria 1072
154 Ga0466967_0894541 3300045976 Bacteria 883
155 Ga0495605_0309035 3300046474 Bacteria 668
156 Ga0495585_0085217 3300046492 Bacteria 1708
157 Ga0495585_0287065 3300046492 Bacteria 812
158 Ga0495594_0092365 3300046499 Bacteria 1697
159 Ga0495594_0426137 3300046499 Bacteria 754
160 Ga0495607_0202358 3300046501 Bacteria 982
161 Ga0495628_0215221 3300046516 Bacteria 1444
162 Ga0495628_0356808 3300046516 Bacteria 1074
163 Ga0495644_0038280 3300046523 Bacteria 1809
164 Ga0495663_0070702 3300046525 Bacteria 1111
165 Ga0495642_0294248 3300046528 Bacteria 711
166 Ga0495640_0557586 3300046533 Bacteria 694
167 Ga0495598_0008920 3300046537 Bacteria 2351
168 Ga0495598_0206230 3300046537 Bacteria 712
169 Ga0495609_0146756 3300046538 Bacteria 1005
170 Ga0495609_0183170 3300046538 Bacteria 881
171 Ga0495621_0080239 3300046539 Bacteria 1216
172 Ga0495633_0066969 3300046558 Bacteria 1677
173 Ga0495656_0003232 3300046615 Bacteria 5498
174 Ga0495656_0099352 3300046615 Bacteria 1343
175 Ga0495659_0007398 3300046664 Bacteria 3484
176 Ga0495659_0056483 3300046664 Bacteria 1441
177 Ga0495670_0021661 3300046691 Bacteria 3171
178 Ga0495670_0124238 3300046691 Bacteria 1342
179 Ga0495604_0139355 3300047317 Bacteria 1734
180 Ga0495604_0460097 3300047317 Bacteria 830
181 Ga0495636_0108318 3300047318 Bacteria 1221
182 Ga0495677_0042447 3300047445 Bacteria 1666
183 Ga0495685_186727 3300047447 Bacteria 667
184 Ga0496100_0074522 3300048903 Bacteria 2274
185 Ga0496100_1229054 3300048903 Unclassified 591
186 Ga0496101_0089225 3300048904 Bacteria 2291
187 Ga0496102_0180302 3300048905 Bacteria 1990
188 Ga0496102_0613550 3300048905 Unclassified 1011
189 Ga0496102_0673949 3300048905 Unclassified 957
190 Ga0496103_0128357 3300048906 Bacteria 1618
191 Ga0496104_0209461 3300048907 Bacteria 1861
192 Ga0496106_0124610 3300048909 Bacteria 2016
193 Ga0496107_0007139 3300048910 Bacteria 7697
194 Ga0496108_0709576 3300048911 Unclassified 872
195 Ga0496108_0982790 3300048911 Bacteria 722
196 Ga0496109_0020495 3300048912 Bacteria 5840
197 Ga0496109_0067903 3300048912 Bacteria 3267
198 Ga0496109_0812336 3300048912 Bacteria 873
199 Ga0496109_0864417 3300048912 Bacteria 842
200 Ga0496112_0088948 3300048915 Bacteria 3056
201 Ga0496113_0350425 3300048916 Bacteria 1184
202 Ga0496114_0273392 3300048917 Bacteria 1489
203 Ga0496116_0001255 3300048919 Bacteria 29451
204 Ga0496122_0000015 3300048925 Bacteria 489028
205 Ga0496122_0000228 3300048925 Bacteria 125699
206 Ga0496123_0026165 3300048926 Bacteria 4379
207 Ga0496125_0246202 3300048928 Bacteria 1131
208 Ga0496126_0000008 3300048929 Bacteria 781752
209 Ga0496126_0000290 3300048929 Bacteria 106499
210 Ga0501297_047690 3300049520 Unclassified 622
211 Ga0501031_0052378 3300049568 Bacteria 2659
212 Ga0501031_0120291 3300049568 Bacteria 1715
213 Ga0501032_0008294 3300049569 Bacteria 7571
214 Ga0501033_0006698 3300049570 Bacteria 9001
215 Ga0501033_0502660 3300049570 Bacteria 838
216 Ga0501034_0075451 3300049571 Bacteria 3379
217 Ga0501034_0595879 3300049571 Bacteria 1011
218 Ga0501036_0023058 3300049572 Bacteria 5239
219 Ga0501036_0699740 3300049572 Bacteria 837
220 Ga0501037_0007290 3300049573 Bacteria 8083
221 Ga0501038_0053913 3300049574 Bacteria 3459
222 Ga0501039_0216303 3300049575 Bacteria 1506
223 Ga0501040_0007562 3300049576 Bacteria 7025
224 Ga0501040_0221384 3300049576 Bacteria 1346
225 Ga0501041_0013648 3300049577 Bacteria 4818
226 Ga0501042_0144444 3300049578 Bacteria 1715
227 Ga0501042_0420282 3300049578 Bacteria 969
228 Ga0501043_0060320 3300049579 Bacteria 2977
229 Ga0501046_0040371 3300049580 Bacteria 3729
230 Ga0501047_0030985 3300049581 Bacteria 5157
231 Ga0501047_0481114 3300049581 Bacteria 1069
232 Ga0501047_0764676 3300049581 Bacteria 782
233 Ga0501048_0069539 3300049582 Bacteria 2487
234 Ga0501068_0029961 3300049584 Bacteria 3226
235 Ga0501068_0414420 3300049584 Bacteria 869
236 Ga0501069_0101723 3300049585 Bacteria 1631
237 Ga0501070_0004057 3300049586 Bacteria 12585
238 Ga0501071_0040023 3300049587 Bacteria 3354
239 Ga0501071_0360026 3300049587 Bacteria 1108
240 Ga0501071_0413742 3300049587 Bacteria 1030
241 Ga0501072_0056607 3300049588 Bacteria 3089
242 Ga0501072_0174376 3300049588 Bacteria 1715
243 Ga0501073_0027543 3300049589 Bacteria 4064
244 Ga0501074_0009600 3300049590 Bacteria 7025
245 Ga0501075_0026917 3300049591 Bacteria 4235
246 Ga0501075_0292445 3300049591 Bacteria 1241
247 Ga0501076_0061977 3300049592 Bacteria 2977
248 Ga0501076_0433034 3300049592 Bacteria 1082
249 Ga0501076_1300851 3300049592 Bacteria 598
250 Ga0501076_1414725 3300049592 Bacteria 571
251 Ga0501077_0010102 3300049593 Bacteria 5876
252 Ga0501077_0407517 3300049593 Bacteria 869
253 Ga0501077_0445458 3300049593 Bacteria 829
254 Ga0501077_0731974 3300049593 Bacteria 636
255 Ga0501079_0014242 3300049741 Bacteria 6062
256 Ga0501079_0568989 3300049741 Bacteria 891
257 Ga0501080_0015817 3300049742 Bacteria 6960
258 Ga0501080_0658833 3300049742 Bacteria 926
259 Ga0501080_0967073 3300049742 Bacteria 740
260 Ga0501081_0146186 3300049743 Bacteria 1696
261 Ga0501081_0456082 3300049743 Bacteria 950
262 Ga0501083_0016800 3300049744 Bacteria 5112
263 Ga0501268_037129 3300049765 Bacteria 905
264 Ga0501270_036302 3300049767 Unclassified 839
265 Ga0501035_0029414 3300049822 Bacteria 5009
266 Ga0501044_0016803 3300049823 Bacteria 7853
267 Ga0501045_0036955 3300049824 Bacteria 3548
268 nmdc:mga05p37_69508_c1 3300050507 Bacteria 4331
269 nmdc:mga08y16_17012_c1 3300050511 Bacteria 7657
270 nmdc:mga0n895_472923_c1 3300050512 Bacteria 1264
271 nmdc:mga0n895_69876_c1 3300050512 Bacteria 3480
272 nmdc:mga0rr50_172650_c1 3300050513 Bacteria 1763
273 nmdc:mga08x19_35333_c1 3300050514 Bacteria 3161
274 nmdc:mga0a205_148909_c1 3300050515 Bacteria 2241
275 Ga0495619_0022981 3300053085 Bacteria 3993
276 Ga0495619_0113518 3300053085 Bacteria 1853
277 Ga0500651_0609512 3300053093 Bacteria 591
278 Ga0500555_000866 3300053103 Bacteria 10784
279 Ga0500616_0001071 3300053153 Bacteria 28659
280 Ga0500645_000579 3300053730 Bacteria 23617
281 Ga0501084_0025302 3300054114 Bacteria 4950
282 Ga0501084_0066972 3300054114 Bacteria 3005
283 Ga0501084_0834259 3300054114 Bacteria 776
284 Ga0501084_0976273 3300054114 Bacteria 712
285 Ga0501082_0037516 3300060353 Bacteria 4178
286 Ga0501082_0101220 3300060353 Bacteria 2492
287 Ga0501082_1301534 3300060353 Bacteria 635
288 Ga0207646_10082813
289 JGI24751J29686_10013659
290 Ga0065712_10429988
291 Ga0065715_10105042
292 Ga0065715_10198028
293 Ga0065707_10523290
294 Ga0070670_100012095
295 Ga0068869_100722280
296 Ga0070680_100286149
297 Ga0070682_100315717
298 Ga0070660_100033379
299 Ga0070689_100615087
300 Ga0070689_101167824
301 Ga0070674_100071530
302 Ga0070709_10329843
303 Ga0070701_10175725
304 Ga0070711_100281378
305 Ga0070705_100125399
306 Ga0070705_100131403
307 Ga0070700_100256128
308 Ga0070700_100981027
309 Ga0070700_101648481
310 Ga0070694_100105075
311 Ga0070694_100261120
312 Ga0070708_100666070
313 Ga0070708_100701999
314 Ga0070678_101465211
315 Ga0070678_101703191
316 Ga0070681_10043729
317 Ga0070685_10256428
318 Ga0070707_100097944
319 Ga0070707_100267779
320 Ga0070698_101704696
321 Ga0070679_100110419
322 Ga0070679_100926358
323 Ga0070697_100061710
324 Ga0070697_101139110
325 Ga0070686_100464195
326 Ga0070696_100026708
327 Ga0070696_100068682
328 Ga0070693_100626818
329 Ga0070693_101300315
330 Ga0070704_100447453
331 Ga0070704_100683635
332 Ga0070664_100625946
333 Ga0068857_100214203
334 Ga0068859_100014446
335 Ga0068859_100223921
336 Ga0068859_102571207
337 Ga0068864_100065817
338 Ga0068866_10095898
339 Ga0068863_100492272
340 Ga0068863_100937620
341 Ga0081455_10730254
342 Ga0081538_10117789
343 Ga0075367_10083824
344 Ga0068871_101704617
345 Ga0075433_10080166
346 Ga0075434_100006816
347 Ga0075434_100363532
348 Ga0068865_100077114
349 Ga0075436_100099025
350 Ga0097620_100014447
351 Ga0097620_100223898
352 Ga0097620_100327486
353 Ga0097620_102571576
354 Ga0075435_100045343
355 Ga0111539_10019103
356 Ga0111539_10274298
357 Ga0105247_10011329
358 Ga0114129_10008808
359 Ga0114129_12665766
360 Ga0105243_10009348
361 Ga0105243_10161501
362 Ga0105243_12614122
363 Ga0105242_10016056
364 Ga0105248_10622707
365 Ga0105248_10932556
366 Ga0105249_10607852
367 Ga0105249_10941770
368 Ga0105239_12146070
369 Ga0163162_10128575
370 Ga0163162_10645064
371 Ga0163162_11361492
372 Ga0157375_11202203
373 Ga0163163_12008907
374 Ga0157380_10113140
375 Ga0157380_10425402
376 Ga0157380_11511462
377 Ga0163161_10254241
378 Ga0213875_10530512
379 Ga0207642_10106168
380 Ga0207710_10011798
381 Ga0207685_10125018
382 Ga0207699_10108134
383 Ga0207699_10886971
384 Ga0207707_10235069
385 Ga0207660_10319238
386 Ga0207657_10043335
387 Ga0207657_10623471
388 Ga0207652_11361636
389 Ga0207646_10226280
390 Ga0207650_10024238
391 Ga0207706_10545905
392 Ga0207686_10156272
393 Ga0207709_10045125
394 Ga0207709_10458489
395 Ga0207670_11166327
396 Ga0207669_10326067
397 Ga0207669_10349350
398 Ga0207704_10023931
399 Ga0207665_10071077
400 Ga0207665_11676858
401 Ga0207711_10316528
402 Ga0207679_10648558
403 Ga0207712_12111826
404 Ga0207677_11207830
405 Ga0207708_10339020
406 Ga0207641_10286881
407 Ga0207648_10015970
408 Ga0207674_10161117
409 Ga0207674_11248191
410 Ga0207675_100233113
411 Ga0207683_10836309
412 Ga0207683_11296003
413 Ga0207683_11413836
414 Ga0207428_10257663
415 Ga0268264_10140352
416 Ga0268264_12197725
417 Ga0307405_10000780
418 Ga0307405_10095893
419 Ga0307413_10055279
420 Ga0307413_10137645
421 Ga0307410_10014141
422 Ga0307410_10041924
423 Ga0307406_10158863
424 Ga0307406_10808078
425 Ga0307407_10000683
426 Ga0307407_10021007
427 Ga0307412_10024068
428 Ga0307412_10043640
429 Ga0307412_10788103
430 Ga0307412_10864536
431 Ga0307409_100241916
432 Ga0307416_100141176
433 Ga0307414_10566537
434 Ga0307411_10230040
435 Ga0373937_0234131
436 Ga0395905_0314719
437 Ga0436364_0711443
438 Ga0439448_0166477
439 Ga0466966_0406598
440 Ga0466967_0616105
441 Ga0466967_0894541
442 Ga0495605_0309035
443 Ga0495585_0085217
444 Ga0495585_0287065
445 Ga0495594_0092365
446 Ga0495594_0426137
447 Ga0495607_0202358
448 Ga0495628_0215221
449 Ga0495628_0356808
450 Ga0495644_0038280
451 Ga0495663_0070702
452 Ga0495642_0294248
453 Ga0495640_0557586
454 Ga0495598_0008920
455 Ga0495598_0206230
456 Ga0495609_0146756
457 Ga0495609_0183170
458 Ga0495621_0080239
459 Ga0495633_0066969
460 Ga0495656_0003232
461 Ga0495656_0099352
462 Ga0495659_0007398
463 Ga0495659_0056483
464 Ga0495670_0021661
465 Ga0495670_0124238
466 Ga0495604_0139355
467 Ga0495604_0460097
468 Ga0495636_0108318
469 Ga0495677_0042447
470 Ga0495685_186727
471 Ga0496100_0074522
472 Ga0496100_1229054
473 Ga0496101_0089225
474 Ga0496102_0180302
475 Ga0496102_0613550
476 Ga0496102_0673949
477 Ga0496103_0128357
478 Ga0496104_0209461
479 Ga0496106_0124610
480 Ga0496107_0007139
481 Ga0496108_0709576
482 Ga0496108_0982790
483 Ga0496109_0020495
484 Ga0496109_0067903
485 Ga0496109_0812336
486 Ga0496109_0864417
487 Ga0496112_0088948
488 Ga0496113_0350425
489 Ga0496114_0273392
490 Ga0496116_0001255
491 Ga0496122_0000015
492 Ga0496122_0000228
493 Ga0496123_0026165
494 Ga0496125_0246202
495 Ga0496126_0000008
496 Ga0496126_0000290
497 Ga0501297_047690
498 Ga0501031_0052378
499 Ga0501031_0120291
500 Ga0501032_0008294
501 Ga0501033_0006698
502 Ga0501033_0502660
503 Ga0501034_0075451
504 Ga0501034_0595879
505 Ga0501036_0023058
506 Ga0501036_0699740
507 Ga0501037_0007290
508 Ga0501038_0053913
509 Ga0501039_0216303
510 Ga0501040_0007562
511 Ga0501040_0221384
512 Ga0501041_0013648
513 Ga0501042_0144444
514 Ga0501042_0420282
515 Ga0501043_0060320
516 Ga0501046_0040371
517 Ga0501047_0030985
518 Ga0501047_0481114
519 Ga0501047_0764676
520 Ga0501048_0069539
521 Ga0501068_0029961
522 Ga0501068_0414420
523 Ga0501069_0101723
524 Ga0501070_0004057
525 Ga0501071_0040023
526 Ga0501071_0360026
527 Ga0501071_0413742
528 Ga0501072_0056607
529 Ga0501072_0174376
530 Ga0501073_0027543
531 Ga0501074_0009600
532 Ga0501075_0026917
533 Ga0501075_0292445
534 Ga0501076_0061977
535 Ga0501076_0433034
536 Ga0501076_1300851
537 Ga0501076_1414725
538 Ga0501077_0010102
539 Ga0501077_0407517
540 Ga0501077_0445458
541 Ga0501077_0731974
542 Ga0501079_0014242
543 Ga0501079_0568989
544 Ga0501080_0015817
545 Ga0501080_0658833
546 Ga0501080_0967073
547 Ga0501081_0146186
548 Ga0501081_0456082
549 Ga0501083_0016800
550 Ga0501268_037129
551 Ga0501270_036302
552 Ga0501035_0029414
553 Ga0501044_0016803
554 Ga0501045_0036955
555 nmdc:mga05p37_69508_c1
556 nmdc:mga08y16_17012_c1
557 nmdc:mga0n895_472923_c1
558 nmdc:mga0n895_69876_c1
559 nmdc:mga0rr50_172650_c1
560 nmdc:mga08x19_35333_c1
561 nmdc:mga0a205_148909_c1
562 Ga0495619_0022981
563 Ga0495619_0113518
564 Ga0500651_0609512
565 Ga0500555_000866
566 Ga0500616_0001071
567 Ga0500645_000579
568 Ga0501084_0025302
569 Ga0501084_0066972
570 Ga0501084_0834259
571 Ga0501084_0976273
572 Ga0501082_0037516
573 Ga0501082_0101220
574 Ga0501082_1301534

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

19

123

0.92

PF08211

dCMP_cyt_deam_2

Cytidine and deoxycytidylate deaminase zinc-binding region

3

101

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d30-assembly1.cif.gz_A crystal structure of cytidine deaminase cdd-2 (ba4525) from bacillus anthracis at 2.40a resolution 0.9711 5 124
3dmo-assembly1.cif.gz_C 1.6 a crystal structure of cytidine deaminase from burkholderia pseudomallei 0.9633 5 124
2fr6-assembly1.cif.gz_A crystal structure of mouse cytidine deaminase complexed with cytidine 0.9568 7 125
1ux1-assembly1.cif.gz_D bacillus subtilis cytidine deaminase with a cys53his and an arg56gln substitution 0.9546 5 130
1jtk-assembly1.cif.gz_A crystal structure of cytidine deaminase from bacillus subtilis in complex with the inhibitor tetrahydrodeoxyuridine 0.9533 5 130
ID Description Score Start End Superfamily
af_A0A1D8PMQ1_5_145_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9332 1 130 3.40.140.10
af_Q2FY04_3_129_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9289 13 127 3.40.140.10
af_F1QSJ0_1_133_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.926 8 132 3.40.140.10
af_Q09190_1_133_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9205 8 130 3.40.140.10
af_A0A1D8PMQ1_5_145_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9129 1 130 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A2V7WNS3-F1-model_v4 Cytidine deaminase 0.9898 10 112 GO:0004126
GO:0005829
GO:0008270
GO:0009972
GO:0042802
AF-A0A658J6Z6-F1-model_v4 deleted 0.9824 5 99
AF-C0GKW3-F1-model_v4 Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) 0.9812 7 110 GO:0004126
GO:0005829
GO:0008270
GO:0009972
AF-A0A536T365-F1-model_v4 Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) 0.9803 7 105 GO:0004126
GO:0005829
GO:0008270
GO:0009972
GO:0042802
AF-A0A3N5NPG1-F1-model_v4 Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) 0.9778 9 131 GO:0004126
GO:0005829
GO:0008270
GO:0009972
GO:0042802

Map