F388013

General Info

Members Datasets Scaffolds Average Seq Length
287 177 287 561

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10016077|Ga0157369_100160774
Length 619
Sequence MGPRAGAGWRSSESAAAIPGAAKDPTRYREDSLVNDSKNLILAVALSALVLLGWGWAANRYFPSSNAPSSKVESGKQQPASQPTVQPNGPAAPKQLQSVSAALGSNPRVSIRTPLLAGSINLKGAEIDDLVLLNHKQAITKDSPPVRLLSPLGAPGAYVAQFGWVAAGRGQVPALDATWTTDNQVLTPGQPVTLSTQTADGSRYQIKIAVDDGYLFTVQQSVTNGTGEPIAVRPIGLVSRASQSADRSTWQNHVGPIGEFDGAADYDVGFDNLDGNEPSFMSKLFGNSAHAGVNSFTSTGGWIGFTDKYWLAAIVPPQNDQMRAQFLRSPSGAYQADYALASNTVAPGQTYTSTASIFAGAKEKARLDQYESAGVPKLSRAIDWGWFRWFMIPIFDLLLILFHSIGNFGLAIICLTFIVRAIMFPIAQKQFQSMAAMRKIQPKMKALQERFKDDKQRQQQEIMKLYQAEKINPAAGCLPILLQIPVFYALYKTLVVSVEMRHQPFILWIKDLSAPDPLTPLNLFGLLHFTLPAMLAIGVLPILVGATQWVSMKLNPQPMDPAQAQVFAIMPWFLVFIMAPFAAGLQLYWITNNLLTIAQQWFLYRKFGLHLSDTHPVHS

Samples

Sample ID Description Type Environment
1 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
9 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
10 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
11 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
12 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
13 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
14 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
23 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
134 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
143 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
144 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
145 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
146 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
150 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
151 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
152 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
169 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
170 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
171 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
172 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
173 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
174 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
175 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.05
Nodule 0
Rhizoplane 5.92
Rhizosphere 91.64
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000099 3300001904 Bacteria 14247
2 JGI24741J21665_1002006 3300001915 Bacteria 5469
3 JGI24752J21851_1000408 3300001976 Bacteria 5889
4 JGI24740J21852_10008204 3300001979 Bacteria 4184
5 JGI24739J22299_10005353 3300001989 Bacteria 4886
6 JGI24739J22299_10006637 3300001989 Bacteria 4357
7 JGI24737J22298_10005017 3300001990 Bacteria 4586
8 JGI24735J21928_10005664 3300002067 Bacteria 4131
9 JGI24750J21931_1000005 3300002070 Bacteria 25499
10 JGI24748J21848_1000076 3300002074 Bacteria 33018
11 JGI24738J21930_10000851 3300002075 Bacteria 8742
12 JGI24749J21850_1000356 3300002076 Bacteria 6800
13 JGI24034J26672_10000071 3300002239 Bacteria 27336
14 JGI24742J22300_10000886 3300002244 Bacteria 4587
15 Ga0065715_10124187 3300005293 Bacteria 2160
16 Ga0070658_10000002 3300005327 Bacteria 637290
17 Ga0070658_10002261 3300005327 Bacteria 16166
18 Ga0070658_10003845 3300005327 Bacteria 12307
19 Ga0070683_100010399 3300005329 Bacteria 8004
20 Ga0070683_100019869 3300005329 Bacteria 5971
21 Ga0070683_100032213 3300005329 Bacteria 4773
22 Ga0070690_100000338 3300005330 Bacteria 24029
23 Ga0070690_100010338 3300005330 Bacteria 5428
24 Ga0070670_100058453 3300005331 Bacteria 3310
25 Ga0070666_10000069 3300005335 Bacteria 75768
26 Ga0070666_10015314 3300005335 Bacteria 4889
27 Ga0068868_100096818 3300005338 Bacteria 2384
28 Ga0070660_100056596 3300005339 Bacteria 3034
29 Ga0070689_100004299 3300005340 Bacteria 9609
30 Ga0070691_10009035 3300005341 Bacteria 4560
31 Ga0070687_100057910 3300005343 Bacteria 2033
32 Ga0070661_100100594 3300005344 Bacteria 2149
33 Ga0070692_10004789 3300005345 Bacteria 5687
34 Ga0070668_100017315 3300005347 Bacteria 5396
35 Ga0070668_100021019 3300005347 Bacteria 4931
36 Ga0070669_100000167 3300005353 Bacteria 57589
37 Ga0070671_100000825 3300005355 Bacteria 22465
38 Ga0070671_100006182 3300005355 Bacteria 9540
39 Ga0070671_100013831 3300005355 Bacteria 6512
40 Ga0070671_100017100 3300005355 Bacteria 5868
41 Ga0070671_100102276 3300005355 Bacteria 2404
42 Ga0070673_100048678 3300005364 Bacteria 3306
43 Ga0070673_100050434 3300005364 Bacteria 3254
44 Ga0070688_100002153 3300005365 Bacteria 9925
45 Ga0070659_100010187 3300005366 Bacteria 6916
46 Ga0070659_100011048 3300005366 Bacteria 6669
47 Ga0070659_100058293 3300005366 Bacteria 3047
48 Ga0070667_100007820 3300005367 Bacteria 8866
49 Ga0070667_100137950 3300005367 Bacteria 2133
50 Ga0070667_100171025 3300005367 Bacteria 1918
51 Ga0070709_10005496 3300005434 Bacteria 6867
52 Ga0070714_100043362 3300005435 Bacteria 3804
53 Ga0070713_100067660 3300005436 Bacteria 3008
54 Ga0070713_100127977 3300005436 Bacteria 2236
55 Ga0070663_100022569 3300005455 Bacteria 4209
56 Ga0070663_100086534 3300005455 Bacteria 2314
57 Ga0070662_100022417 3300005457 Bacteria 4324
58 Ga0070662_100093528 3300005457 Bacteria 2262
59 Ga0068867_100004002 3300005459 Bacteria 10367
60 Ga0070685_10000036 3300005466 Bacteria 80641
61 Ga0070679_100085928 3300005530 Bacteria 3133
62 Ga0070684_100069402 3300005535 Bacteria 3099
63 Ga0068853_100010266 3300005539 Bacteria 7574
64 Ga0070672_100076688 3300005543 Bacteria 2671
65 Ga0070686_100000045 3300005544 Bacteria 101988
66 Ga0070686_100014585 3300005544 Bacteria 4534
67 Ga0070665_100000042 3300005548 Bacteria 292582
68 Ga0068855_100035472 3300005563 Bacteria 5940
69 Ga0070664_100021083 3300005564 Bacteria 5369
70 Ga0068857_100016853 3300005577 Bacteria 6401
71 Ga0068857_100055180 3300005577 Bacteria 3526
72 Ga0068852_100116540 3300005616 Bacteria 2437
73 Ga0068852_100134776 3300005616 Bacteria 2279
74 Ga0068859_100045068 3300005617 Bacteria 4431
75 Ga0068859_100090749 3300005617 Bacteria 3106
76 Ga0068864_100001290 3300005618 Bacteria 20864
77 Ga0068864_100005290 3300005618 Bacteria 10571
78 Ga0068864_100029448 3300005618 Bacteria 4651
79 Ga0068861_100001765 3300005719 Bacteria 13901
80 Ga0068861_100094794 3300005719 Bacteria 2362
81 Ga0068863_100000239 3300005841 Bacteria 58509
82 Ga0068863_100012076 3300005841 Bacteria 8344
83 Ga0068858_100002824 3300005842 Bacteria 17456
84 Ga0068858_100021992 3300005842 Bacteria 5956
85 Ga0068858_100053544 3300005842 Bacteria 3732
86 Ga0068860_100000182 3300005843 Bacteria 100888
87 Ga0068860_100006788 3300005843 Bacteria 11471
88 Ga0068862_100000163 3300005844 Bacteria 74506
89 Ga0068862_100000392 3300005844 Bacteria 47165
90 Ga0081455_10000187 3300005937 Bacteria 78623
91 Ga0081539_10006717 3300005985 Bacteria 10840
92 Ga0097621_100014304 3300006237 Bacteria 5935
93 Ga0068871_100080348 3300006358 Bacteria 2699
94 Ga0097620_100045068 3300006931 Bacteria 4431
95 Ga0097620_100090757 3300006931 Bacteria 3106
96 Ga0105240_10109137 3300009093 Bacteria 3352
97 Ga0105245_10028099 3300009098 Bacteria 4958
98 Ga0105247_10002736 3300009101 Bacteria 11818
99 Ga0105247_10061626 3300009101 Bacteria 2326
100 Ga0105242_10000993 3300009176 Bacteria 22209
101 Ga0105248_10008681 3300009177 Bacteria 11165
102 Ga0105248_10020042 3300009177 Bacteria 7406
103 Ga0105248_10099101 3300009177 Bacteria 3284
104 Ga0105237_10053552 3300009545 Bacteria 4047
105 Ga0105238_10027736 3300009551 Bacteria 5772
106 Ga0105238_10073539 3300009551 Bacteria 3412
107 Ga0105249_10000012 3300009553 Bacteria 292640
108 Ga0105249_10000103 3300009553 Bacteria 118397
109 Ga0105239_10031723 3300010375 Bacteria 5806
110 Ga0157371_10012875 3300013102 Bacteria 6370
111 Ga0157371_10038346 3300013102 Bacteria 3429
112 Ga0157370_10076562 3300013104 Bacteria 3151
113 Ga0157369_10016077 3300013105 Bacteria 8419
114 Ga0157369_10036491 3300013105 Bacteria 5384
115 Ga0157372_10002170 3300013307 Bacteria 21361
116 Ga0157375_10010035 3300013308 Bacteria 8325
117 Ga0163163_10033677 3300014325 Bacteria 4957
118 Ga0163163_10141694 3300014325 Bacteria 2447
119 Ga0157380_10001315 3300014326 Bacteria 16128
120 Ga0157379_10036983 3300014968 Bacteria 4352
121 Ga0157379_10114594 3300014968 Bacteria 2423
122 Ga0157376_10033036 3300014969 Bacteria 4162
123 Ga0163161_10000202 3300017792 Bacteria 54518
124 Ga0207672_1000418 3300025223 Bacteria 5397
125 Ga0207697_10003593 3300025315 Bacteria 7608
126 Ga0207688_10028334 3300025901 Bacteria 3081
127 Ga0207680_10000012 3300025903 Bacteria 293810
128 Ga0207680_10025261 3300025903 Bacteria 3275
129 Ga0207647_10003796 3300025904 Bacteria 11293
130 Ga0207647_10027574 3300025904 Bacteria 3702
131 Ga0207647_10039429 3300025904 Bacteria 2980
132 Ga0207705_10000008 3300025909 Bacteria 589717
133 Ga0207705_10006704 3300025909 Bacteria 8515
134 Ga0207705_10052145 3300025909 Bacteria 2944
135 Ga0207654_10000754 3300025911 Bacteria 17918
136 Ga0207707_10012787 3300025912 Bacteria 7303
137 Ga0207695_10010118 3300025913 Bacteria 11575
138 Ga0207695_10055456 3300025913 Bacteria 4130
139 Ga0207671_10000358 3300025914 Bacteria 65072
140 Ga0207657_10001393 3300025919 Bacteria 25775
141 Ga0207657_10005176 3300025919 Bacteria 13680
142 Ga0207657_10036194 3300025919 Bacteria 4420
143 Ga0207657_10042839 3300025919 Bacteria 3991
144 Ga0207657_10044267 3300025919 Bacteria 3914
145 Ga0207657_10064960 3300025919 Bacteria 3112
146 Ga0207649_10011668 3300025920 Bacteria 4854
147 Ga0207649_10025238 3300025920 Bacteria 3463
148 Ga0207649_10084610 3300025920 Bacteria 2062
149 Ga0207652_10133270 3300025921 Bacteria 2217
150 Ga0207681_10000076 3300025923 Bacteria 89353
151 Ga0207694_10025689 3300025924 Bacteria 4477
152 Ga0207694_10061197 3300025924 Bacteria 2930
153 Ga0207650_10043162 3300025925 Bacteria 3309
154 Ga0207700_10021189 3300025928 Bacteria 4432
155 Ga0207700_10023020 3300025928 Bacteria 4286
156 Ga0207664_10015933 3300025929 Bacteria 5474
157 Ga0207644_10000254 3300025931 Bacteria 36059
158 Ga0207644_10000480 3300025931 Bacteria 25749
159 Ga0207644_10008610 3300025931 Bacteria 6673
160 Ga0207690_10007769 3300025932 Bacteria 6367
161 Ga0207706_10003424 3300025933 Bacteria 15149
162 Ga0207706_10010762 3300025933 Bacteria 8351
163 Ga0207706_10020442 3300025933 Bacteria 5952
164 Ga0207706_10032000 3300025933 Bacteria 4686
165 Ga0207706_10131065 3300025933 Bacteria 2205
166 Ga0207686_10087936 3300025934 Bacteria 2045
167 Ga0207670_10040446 3300025936 Bacteria 3060
168 Ga0207669_10013644 3300025937 Bacteria 4045
169 Ga0207704_10026012 3300025938 Bacteria 3203
170 Ga0207711_10026436 3300025941 Bacteria 4870
171 Ga0207711_10101935 3300025941 Bacteria 2540
172 Ga0207689_10021845 3300025942 Bacteria 5381
173 Ga0207661_10014441 3300025944 Bacteria 5789
174 Ga0207667_10023530 3300025949 Bacteria 6782
175 Ga0207667_10038314 3300025949 Bacteria 5121
176 Ga0207651_10001484 3300025960 Bacteria 10671
177 Ga0207712_10000021 3300025961 Bacteria 292649
178 Ga0207712_10000069 3300025961 Bacteria 127318
179 Ga0207668_10009480 3300025972 Bacteria 5839
180 Ga0207668_10017228 3300025972 Bacteria 4522
181 Ga0207640_10023246 3300025981 Bacteria 3723
182 Ga0207658_10001111 3300025986 Bacteria 21725
183 Ga0207658_10079431 3300025986 Bacteria 2509
184 Ga0207677_10018043 3300026023 Bacteria 4226
185 Ga0207677_10057994 3300026023 Bacteria 2663
186 Ga0207677_10094523 3300026023 Bacteria 2182
187 Ga0207703_10002473 3300026035 Bacteria 16026
188 Ga0207703_10007577 3300026035 Bacteria 8605
189 Ga0207703_10020734 3300026035 Bacteria 5143
190 Ga0207639_10000798 3300026041 Bacteria 21425
191 Ga0207639_10003539 3300026041 Bacteria 10493
192 Ga0207639_10082756 3300026041 Bacteria 2545
193 Ga0207678_10004085 3300026067 Bacteria 13124
194 Ga0207678_10005615 3300026067 Bacteria 11218
195 Ga0207678_10012937 3300026067 Bacteria 7323
196 Ga0207702_10004320 3300026078 Bacteria 12676
197 Ga0207702_10059094 3300026078 Bacteria 3265
198 Ga0207702_10088600 3300026078 Bacteria 2704
199 Ga0207641_10000589 3300026088 Bacteria 39950
200 Ga0207641_10016333 3300026088 Bacteria 6078
201 Ga0207648_10004524 3300026089 Bacteria 14251
202 Ga0207648_10010962 3300026089 Bacteria 8562
203 Ga0207676_10000921 3300026095 Bacteria 22753
204 Ga0207674_10000580 3300026116 Bacteria 48154
205 Ga0207674_10007588 3300026116 Bacteria 12639
206 Ga0207674_10011216 3300026116 Bacteria 10072
207 Ga0207674_10012038 3300026116 Bacteria 9692
208 Ga0207674_10023780 3300026116 Bacteria 6557
209 Ga0207675_100000227 3300026118 Bacteria 53090
210 Ga0207683_10040215 3300026121 Bacteria 4079
211 Ga0207698_10000703 3300026142 Bacteria 19442
212 Ga0207698_10008333 3300026142 Bacteria 6549
213 Ga0268266_10000054 3300028379 Bacteria 292717
214 Ga0268265_10000182 3300028380 Bacteria 74651
215 Ga0268265_10000278 3300028380 Bacteria 58293
216 Ga0268264_10000074 3300028381 Bacteria 259555
217 Ga0268264_10004758 3300028381 Bacteria 11524
218 Ga0307405_10028429 3300031731 Bacteria 3256
219 Ga0307412_10005076 3300031911 Bacteria 7362
220 Ga0373923_0017800 3300035111 Bacteria 2723
221 Ga0373956_0038364 3300035119 Bacteria 2119
222 Ga0373937_0053100 3300036401 Bacteria 3717
223 Ga0395899_0099335 3300037312 Bacteria 2102
224 Ga0395900_0018428 3300037418 Bacteria 7120
225 Ga0395900_0113377 3300037418 Bacteria 2782
226 Ga0395898_0008853 3300037466 Bacteria 10607
227 Ga0395898_0084708 3300037466 Bacteria 3055
228 Ga0395898_0097473 3300037466 Bacteria 2824
229 Ga0395898_0131239 3300037466 Bacteria 2399
230 Ga0395905_0006961 3300037471 Bacteria 11302
231 Ga0395905_0018675 3300037471 Bacteria 6576
232 Ga0395905_0040293 3300037471 Bacteria 4382
233 Ga0395905_0101384 3300037471 Bacteria 2702
234 Ga0395901_0012265 3300038443 Bacteria 8698
235 Ga0395901_0015609 3300038443 Bacteria 7737
236 Ga0395901_0048031 3300038443 Bacteria 4432
237 Ga0395901_0053777 3300038443 Bacteria 4184
238 Ga0395901_0262162 3300038443 Bacteria 1798
239 Ga0466966_0048113 3300044684 Bacteria 2717
240 Ga0466963_0019388 3300044694 Bacteria 4265
241 Ga0466963_0049238 3300044694 Bacteria 2786
242 Ga0466964_0007184 3300044706 Bacteria 4165
243 Ga0466968_0016562 3300044735 Bacteria 2936
244 Ga0466957_0007678 3300044842 Bacteria 6099
245 Ga0466957_0014063 3300044842 Bacteria 4656
246 Ga0466959_0012236 3300045049 Bacteria 6192
247 Ga0466967_0006449 3300045976 Bacteria 8303
248 Ga0466967_0026112 3300045976 Bacteria 4831
249 Ga0466967_0130396 3300045976 Bacteria 2333
250 Ga0466967_0162157 3300045976 Bacteria 2099
251 Ga0466967_0185584 3300045976 Bacteria 1964
252 Ga0495585_0050845 3300046492 Bacteria 2298
253 Ga0495598_0001895 3300046537 Bacteria 4227
254 Ga0495621_0000149 3300046539 Bacteria 15217
255 Ga0495669_0016177 3300046684 Bacteria 3195
256 Ga0496100_0000581 3300048903 Bacteria 17237
257 Ga0496101_0001704 3300048904 Bacteria 13163
258 Ga0496101_0013935 3300048904 Bacteria 5398
259 Ga0496102_0005504 3300048905 Bacteria 10750
260 Ga0496103_0001069 3300048906 Bacteria 19126
261 Ga0496105_0012037 3300048908 Bacteria 6849
262 Ga0496106_0007631 3300048909 Bacteria 8001
263 Ga0496106_0076269 3300048909 Bacteria 2569
264 Ga0496107_0002199 3300048910 Bacteria 12535
265 Ga0496107_0002436 3300048910 Bacteria 12049
266 Ga0496108_0050908 3300048911 Bacteria 3469
267 Ga0496109_0036533 3300048912 Bacteria 4434
268 Ga0496110_0004822 3300048913 Bacteria 10510
269 Ga0496110_0008123 3300048913 Bacteria 8431
270 Ga0496111_0001025 3300048914 Bacteria 15334
271 Ga0496111_0011633 3300048914 Bacteria 5936
272 Ga0496113_0001059 3300048916 Bacteria 14849
273 Ga0496116_0015468 3300048919 Bacteria 6030
274 Ga0496117_0009179 3300048920 Bacteria 9267
275 Ga0496118_0010733 3300048921 Bacteria 9031
276 Ga0496125_0090926 3300048928 Bacteria 2289
277 Ga0501292_000330 3300049515 Bacteria 6574
278 Ga0501206_000836 3300049653 Bacteria 3770
279 Ga0501223_001165 3300049663 Bacteria 6192
280 Ga0501261_000343 3300049690 Bacteria 6289
281 Ga0501279_000008 3300049775 Bacteria 125267
282 Ga0501280_000013 3300049776 Bacteria 59205
283 Ga0501282_000323 3300049778 Bacteria 5782
284 Ga0500643_000195 3300053087 Bacteria 57960
285 Ga0500643_000259 3300053087 Bacteria 47194
286 Ga0500568_0002951 3300053139 Bacteria 9738
287 Ga0466962_0030048 3300061719 Bacteria 2601

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0262162 Ga0395901_0262162_312_1766 480
2 3300005366 Ga0070659_100010187 Ga0070659_1000101877 509
3 3300025932 Ga0207690_10007769 Ga0207690_100077697 509
4 3300025919 Ga0207657_10005176 Ga0207657_1000517612 513
5 3300005327 Ga0070658_10000002 Ga0070658_10000002530 514
6 3300025909 Ga0207705_10000008 Ga0207705_10000008260 514
7 3300005345 Ga0070692_10004789 Ga0070692_100047892 515
8 3300025929 Ga0207664_10015933 Ga0207664_100159336 523
9 3300005327 Ga0070658_10002261 Ga0070658_100022616 524
10 3300005329 Ga0070683_100010399 Ga0070683_1000103995 524
11 3300005535 Ga0070684_100069402 Ga0070684_1000694023 524
12 3300013102 Ga0157371_10012875 Ga0157371_100128755 524
13 3300009553 Ga0105249_10000103 Ga0105249_1000010318 526
14 3300025961 Ga0207712_10000069 Ga0207712_1000006920 526
15 3300037471 Ga0395905_0006961 Ga0395905_0006961_5012_6718 527
16 3300005985 Ga0081539_10006717 Ga0081539_100067176 530
17 3300005617 Ga0068859_100090749 Ga0068859_1000907492 533
18 3300005843 Ga0068860_100006788 Ga0068860_10000678812 533
19 3300006931 Ga0097620_100090757 Ga0097620_1000907572 533
20 3300009101 Ga0105247_10002736 Ga0105247_100027368 533
21 3300028381 Ga0268264_10004758 Ga0268264_1000475813 533
22 3300005844 Ga0068862_100000163 Ga0068862_10000016371 534
23 3300028380 Ga0268265_10000182 Ga0268265_1000018272 534
24 3300046492 Ga0495585_0050845 Ga0495585_0050845_324_2018 534
25 3300037418 Ga0395900_0113377 Ga0395900_0113377_829_2526 536
26 3300037471 Ga0395905_0101384 Ga0395905_0101384_986_2683 536
27 3300005436 Ga0070713_100127977 Ga0070713_1001279771 539
28 3300005616 Ga0068852_100116540 Ga0068852_1001165403 539
29 3300025928 Ga0207700_10023020 Ga0207700_100230206 539
30 3300026041 Ga0207639_10082756 Ga0207639_100827564 539
31 3300038443 Ga0395901_0053777 Ga0395901_0053777_1877_3586 539
32 3300005329 Ga0070683_100019869 Ga0070683_1000198695 544
33 3300025904 Ga0207647_10039429 Ga0207647_100394293 544
34 3300026142 Ga0207698_10008333 Ga0207698_100083336 544
35 3300045976 Ga0466967_0162157 Ga0466967_0162157_33_1736 544
36 3300005347 Ga0070668_100017315 Ga0070668_1000173154 545
37 3300009177 Ga0105248_10008681 Ga0105248_1000868112 545
38 3300025972 Ga0207668_10009480 Ga0207668_100094806 545
39 3300048904 Ga0496101_0013935 Ga0496101_0013935_3148_4833 545
40 3300048909 Ga0496106_0007631 Ga0496106_0007631_3739_5424 545
41 3300048910 Ga0496107_0002436 Ga0496107_0002436_1228_2913 545
42 3300048911 Ga0496108_0050908 Ga0496108_0050908_507_2192 545
43 3300048913 Ga0496110_0004822 Ga0496110_0004822_1362_3047 545
44 3300048914 Ga0496111_0001025 Ga0496111_0001025_6105_7790 545
45 3300053139 Ga0500568_0002951 Ga0500568_0002951_5734_7452 545
46 3300005530 Ga0070679_100085928 Ga0070679_1000859282 548
47 3300025904 Ga0207647_10027574 Ga0207647_100275744 548
48 3300025909 Ga0207705_10052145 Ga0207705_100521453 548
49 3300025919 Ga0207657_10064960 Ga0207657_100649606 548
50 3300025944 Ga0207661_10014441 Ga0207661_100144415 548
51 3300026116 Ga0207674_10007588 Ga0207674_100075889 548
52 3300044842 Ga0466957_0007678 Ga0466957_0007678_3454_5157 548
53 3300061719 Ga0466962_0030048 Ga0466962_0030048_132_1835 548
54 3300005563 Ga0068855_100035472 Ga0068855_1000354725 549
55 3300001915 JGI24741J21665_1002006 JGI24741J21665_10020065 550
56 3300001979 JGI24740J21852_10008204 JGI24740J21852_100082043 550
57 3300001989 JGI24739J22299_10006637 JGI24739J22299_100066375 550
58 3300005329 Ga0070683_100032213 Ga0070683_1000322135 550
59 3300005455 Ga0070663_100086534 Ga0070663_1000865343 550
60 3300005457 Ga0070662_100022417 Ga0070662_1000224174 550
61 3300005577 Ga0068857_100055180 Ga0068857_1000551805 550
62 3300005937 Ga0081455_10000187 Ga0081455_1000018758 550
63 3300025912 Ga0207707_10012787 Ga0207707_100127876 550
64 3300025919 Ga0207657_10042839 Ga0207657_100428395 550
65 3300025920 Ga0207649_10011668 Ga0207649_100116686 550
66 3300025921 Ga0207652_10133270 Ga0207652_101332702 550
67 3300025933 Ga0207706_10020442 Ga0207706_100204425 550
68 3300026067 Ga0207678_10004085 Ga0207678_1000408510 550
69 3300026116 Ga0207674_10012038 Ga0207674_100120388 550
70 3300037466 Ga0395898_0097473 Ga0395898_0097473_806_2509 550
71 3300037471 Ga0395905_0018675 Ga0395905_0018675_2446_4149 550
72 3300038443 Ga0395901_0012265 Ga0395901_0012265_4828_6531 550
73 3300005355 Ga0070671_100000825 Ga0070671_10000082521 551
74 3300005618 Ga0068864_100001290 Ga0068864_10000129015 551
75 3300025931 Ga0207644_10008610 Ga0207644_100086106 551
76 3300035111 Ga0373923_0017800 Ga0373923_0017800_598_2304 552
77 3300035119 Ga0373956_0038364 Ga0373956_0038364_373_2079 552
78 3300036401 Ga0373937_0053100 Ga0373937_0053100_1569_3275 552
79 3300037466 Ga0395898_0131239 Ga0395898_0131239_257_1954 552
80 3300037471 Ga0395905_0040293 Ga0395905_0040293_2211_3920 552
81 3300037312 Ga0395899_0099335 Ga0395899_0099335_272_1975 553
82 3300037466 Ga0395898_0084708 Ga0395898_0084708_1081_2784 553
83 3300045976 Ga0466967_0006449 Ga0466967_0006449_5136_6839 554
84 3300005366 Ga0070659_100011048 Ga0070659_1000110485 555
85 3300044684 Ga0466966_0048113 Ga0466966_0048113_1003_2700 555
86 3300045049 Ga0466959_0012236 Ga0466959_0012236_3085_4782 555
87 3300044694 Ga0466963_0049238 Ga0466963_0049238_1004_2713 556
88 3300046537 Ga0495598_0001895 Ga0495598_0001895_1627_3315 556
89 3300046539 Ga0495621_0000149 Ga0495621_0000149_3368_5056 556
90 3300046684 Ga0495669_0016177 Ga0495669_0016177_1413_3101 556
91 3300005355 Ga0070671_100006182 Ga0070671_10000618211 557
92 3300005616 Ga0068852_100134776 Ga0068852_1001347762 557
93 3300005343 Ga0070687_100057910 Ga0070687_1000579102 559
94 3300045976 Ga0466967_0185584 Ga0466967_0185584_78_1775 560
95 3300053087 Ga0500643_000195 Ga0500643_000195_33034_34719 560
96 3300005577 Ga0068857_100016853 Ga0068857_1000168533 561
97 3300009551 Ga0105238_10027736 Ga0105238_100277364 561
98 3300025933 Ga0207706_10003424 Ga0207706_1000342413 561
99 3300026041 Ga0207639_10003539 Ga0207639_100035391 561
100 3300026116 Ga0207674_10011216 Ga0207674_1001121610 561
101 3300001976 JGI24752J21851_1000408 JGI24752J21851_10004082 562
102 3300001989 JGI24739J22299_10005353 JGI24739J22299_100053534 562
103 3300001990 JGI24737J22298_10005017 JGI24737J22298_100050176 562
104 3300002067 JGI24735J21928_10005664 JGI24735J21928_100056644 562
105 3300002075 JGI24738J21930_10000851 JGI24738J21930_100008516 562
106 3300005293 Ga0065715_10124187 Ga0065715_101241871 562
107 3300005327 Ga0070658_10003845 Ga0070658_100038459 562
108 3300005330 Ga0070690_100010338 Ga0070690_1000103382 562
109 3300005331 Ga0070670_100058453 Ga0070670_1000584532 562
110 3300005335 Ga0070666_10015314 Ga0070666_100153145 562
111 3300005338 Ga0068868_100096818 Ga0068868_1000968182 562
112 3300005339 Ga0070660_100056596 Ga0070660_1000565962 562
113 3300005341 Ga0070691_10009035 Ga0070691_100090353 562
114 3300005344 Ga0070661_100100594 Ga0070661_1001005941 562
115 3300005355 Ga0070671_100013831 Ga0070671_1000138317 562
116 3300005355 Ga0070671_100102276 Ga0070671_1001022762 562
117 3300005364 Ga0070673_100048678 Ga0070673_1000486785 562
118 3300005364 Ga0070673_100050434 Ga0070673_1000504343 562
119 3300005366 Ga0070659_100058293 Ga0070659_1000582935 562
120 3300005367 Ga0070667_100137950 Ga0070667_1001379502 562
121 3300005434 Ga0070709_10005496 Ga0070709_100054963 562
122 3300005435 Ga0070714_100043362 Ga0070714_1000433622 562
123 3300005436 Ga0070713_100067660 Ga0070713_1000676605 562
124 3300005455 Ga0070663_100022569 Ga0070663_1000225696 562
125 3300005457 Ga0070662_100093528 Ga0070662_1000935282 562
126 3300005459 Ga0068867_100004002 Ga0068867_1000040022 562
127 3300005539 Ga0068853_100010266 Ga0068853_1000102666 562
128 3300005543 Ga0070672_100076688 Ga0070672_1000766883 562
129 3300005544 Ga0070686_100014585 Ga0070686_1000145855 562
130 3300005564 Ga0070664_100021083 Ga0070664_1000210832 562
131 3300005617 Ga0068859_100045068 Ga0068859_1000450685 562
132 3300005618 Ga0068864_100005290 Ga0068864_10000529010 562
133 3300005618 Ga0068864_100029448 Ga0068864_1000294487 562
134 3300005719 Ga0068861_100001765 Ga0068861_1000017654 562
135 3300005719 Ga0068861_100094794 Ga0068861_1000947943 562
136 3300005841 Ga0068863_100012076 Ga0068863_1000120765 562
137 3300005842 Ga0068858_100002824 Ga0068858_1000028249 562
138 3300005842 Ga0068858_100021992 Ga0068858_1000219925 562
139 3300005842 Ga0068858_100053544 Ga0068858_1000535442 562
140 3300006237 Ga0097621_100014304 Ga0097621_1000143042 562
141 3300006358 Ga0068871_100080348 Ga0068871_1000803482 562
142 3300006931 Ga0097620_100045068 Ga0097620_1000450685 562
143 3300009093 Ga0105240_10109137 Ga0105240_101091371 562
144 3300009098 Ga0105245_10028099 Ga0105245_100280991 562
145 3300009101 Ga0105247_10061626 Ga0105247_100616262 562
146 3300009176 Ga0105242_10000993 Ga0105242_100009931 562
147 3300009177 Ga0105248_10099101 Ga0105248_100991013 562
148 3300009545 Ga0105237_10053552 Ga0105237_100535523 562
149 3300009551 Ga0105238_10073539 Ga0105238_100735393 562
150 3300009553 Ga0105249_10000012 Ga0105249_1000001258 562
151 3300010375 Ga0105239_10031723 Ga0105239_100317235 562
152 3300013102 Ga0157371_10038346 Ga0157371_100383463 562
153 3300013104 Ga0157370_10076562 Ga0157370_100765622 562
154 3300013307 Ga0157372_10002170 Ga0157372_1000217021 562
155 3300013308 Ga0157375_10010035 Ga0157375_100100355 562
156 3300014325 Ga0163163_10033677 Ga0163163_100336773 562
157 3300014325 Ga0163163_10141694 Ga0163163_101416942 562
158 3300014968 Ga0157379_10114594 Ga0157379_101145942 562
159 3300014969 Ga0157376_10033036 Ga0157376_100330365 562
160 3300025223 Ga0207672_1000418 Ga0207672_10004184 562
161 3300025315 Ga0207697_10003593 Ga0207697_100035935 562
162 3300025901 Ga0207688_10028334 Ga0207688_100283343 562
163 3300025903 Ga0207680_10025261 Ga0207680_100252613 562
164 3300025904 Ga0207647_10003796 Ga0207647_100037966 562
165 3300025909 Ga0207705_10006704 Ga0207705_100067046 562
166 3300025911 Ga0207654_10000754 Ga0207654_100007546 562
167 3300025913 Ga0207695_10010118 Ga0207695_1001011816 562
168 3300025913 Ga0207695_10055456 Ga0207695_100554564 562
169 3300025919 Ga0207657_10001393 Ga0207657_100013933 562
170 3300025919 Ga0207657_10036194 Ga0207657_100361943 562
171 3300025919 Ga0207657_10044267 Ga0207657_100442673 562
172 3300025920 Ga0207649_10025238 Ga0207649_100252384 562
173 3300025920 Ga0207649_10084610 Ga0207649_100846102 562
174 3300025924 Ga0207694_10025689 Ga0207694_100256892 562
175 3300025924 Ga0207694_10061197 Ga0207694_100611973 562
176 3300025925 Ga0207650_10043162 Ga0207650_100431622 562
177 3300025928 Ga0207700_10021189 Ga0207700_100211892 562
178 3300025931 Ga0207644_10000480 Ga0207644_1000048037 562
179 3300025933 Ga0207706_10010762 Ga0207706_100107626 562
180 3300025933 Ga0207706_10032000 Ga0207706_100320005 562
181 3300025933 Ga0207706_10131065 Ga0207706_101310652 562
182 3300025934 Ga0207686_10087936 Ga0207686_100879362 562
183 3300025936 Ga0207670_10040446 Ga0207670_100404463 562
184 3300025937 Ga0207669_10013644 Ga0207669_100136445 562
185 3300025938 Ga0207704_10026012 Ga0207704_100260123 562
186 3300025941 Ga0207711_10026436 Ga0207711_100264363 562
187 3300025941 Ga0207711_10101935 Ga0207711_101019352 562
188 3300025942 Ga0207689_10021845 Ga0207689_100218454 562
189 3300025949 Ga0207667_10023530 Ga0207667_100235304 562
190 3300025949 Ga0207667_10038314 Ga0207667_100383146 562
191 3300025960 Ga0207651_10001484 Ga0207651_100014846 562
192 3300025981 Ga0207640_10023246 Ga0207640_100232463 562
193 3300025986 Ga0207658_10001111 Ga0207658_1000111113 562
194 3300025986 Ga0207658_10079431 Ga0207658_100794312 562
195 3300026023 Ga0207677_10018043 Ga0207677_100180435 562
196 3300026023 Ga0207677_10057994 Ga0207677_100579942 562
197 3300026023 Ga0207677_10094523 Ga0207677_100945231 562
198 3300026035 Ga0207703_10002473 Ga0207703_1000247315 562
199 3300026035 Ga0207703_10020734 Ga0207703_100207345 562
200 3300026041 Ga0207639_10000798 Ga0207639_100007984 562
201 3300026067 Ga0207678_10005615 Ga0207678_100056156 562
202 3300026067 Ga0207678_10012937 Ga0207678_100129376 562
203 3300026078 Ga0207702_10004320 Ga0207702_1000432010 562
204 3300026078 Ga0207702_10059094 Ga0207702_100590942 562
205 3300026078 Ga0207702_10088600 Ga0207702_100886002 562
206 3300026088 Ga0207641_10000589 Ga0207641_1000058923 562
207 3300026088 Ga0207641_10016333 Ga0207641_100163335 562
208 3300026089 Ga0207648_10004524 Ga0207648_1000452414 562
209 3300026089 Ga0207648_10010962 Ga0207648_100109623 562
210 3300026095 Ga0207676_10000921 Ga0207676_100009216 562
211 3300026116 Ga0207674_10000580 Ga0207674_1000058030 562
212 3300026116 Ga0207674_10023780 Ga0207674_100237803 562
213 3300026121 Ga0207683_10040215 Ga0207683_100402154 562
214 3300026142 Ga0207698_10000703 Ga0207698_1000070316 562
215 3300037418 Ga0395900_0018428 Ga0395900_0018428_2213_3922 562
216 3300037466 Ga0395898_0008853 Ga0395898_0008853_200_1903 562
217 3300045976 Ga0466967_0026112 Ga0466967_0026112_1962_3668 562
218 3300048903 Ga0496100_0000581 Ga0496100_0000581_14636_16345 562
219 3300048904 Ga0496101_0001704 Ga0496101_0001704_6745_8454 562
220 3300048905 Ga0496102_0005504 Ga0496102_0005504_8170_9858 562
221 3300048906 Ga0496103_0001069 Ga0496103_0001069_5447_7135 562
222 3300048908 Ga0496105_0012037 Ga0496105_0012037_615_2324 562
223 3300048909 Ga0496106_0076269 Ga0496106_0076269_97_1806 562
224 3300048910 Ga0496107_0002199 Ga0496107_0002199_6250_7959 562
225 3300048912 Ga0496109_0036533 Ga0496109_0036533_1007_2716 562
226 3300048913 Ga0496110_0008123 Ga0496110_0008123_1493_3202 562
227 3300048914 Ga0496111_0011633 Ga0496111_0011633_3996_5705 562
228 3300048916 Ga0496113_0001059 Ga0496113_0001059_4802_6511 562
229 3300048919 Ga0496116_0015468 Ga0496116_0015468_2882_4570 562
230 3300048920 Ga0496117_0009179 Ga0496117_0009179_765_2453 562
231 3300048921 Ga0496118_0010733 Ga0496118_0010733_3365_5053 562
232 3300048928 Ga0496125_0090926 Ga0496125_0090926_438_2126 562
233 3300038443 Ga0395901_0015609 Ga0395901_0015609_1391_3118 563
234 3300044694 Ga0466963_0019388 Ga0466963_0019388_753_2462 563
235 3300044706 Ga0466964_0007184 Ga0466964_0007184_1069_2778 563
236 3300044735 Ga0466968_0016562 Ga0466968_0016562_620_2329 563
237 3300044842 Ga0466957_0014063 Ga0466957_0014063_1803_3512 563
238 3300045976 Ga0466967_0130396 Ga0466967_0130396_614_2323 563
239 3300038443 Ga0395901_0048031 Ga0395901_0048031_598_2349 564
240 3300013105 Ga0157369_10016077 Ga0157369_100160774 566
241 3300001904 JGI24736J21556_1000099 JGI24736J21556_10000997 568
242 3300002070 JGI24750J21931_1000005 JGI24750J21931_100000510 568
243 3300002074 JGI24748J21848_1000076 JGI24748J21848_100007617 568
244 3300002076 JGI24749J21850_1000356 JGI24749J21850_10003563 568
245 3300002239 JGI24034J26672_10000071 JGI24034J26672_1000007112 568
246 3300002244 JGI24742J22300_10000886 JGI24742J22300_100008863 568
247 3300005330 Ga0070690_100000338 Ga0070690_10000033821 568
248 3300005335 Ga0070666_10000069 Ga0070666_1000006919 568
249 3300005340 Ga0070689_100004299 Ga0070689_10000429910 568
250 3300005347 Ga0070668_100021019 Ga0070668_1000210192 568
251 3300005353 Ga0070669_100000167 Ga0070669_10000016752 568
252 3300005355 Ga0070671_100017100 Ga0070671_1000171003 568
253 3300005365 Ga0070688_100002153 Ga0070688_1000021538 568
254 3300005367 Ga0070667_100007820 Ga0070667_1000078205 568
255 3300005367 Ga0070667_100171025 Ga0070667_1001710251 568
256 3300005466 Ga0070685_10000036 Ga0070685_1000003656 568
257 3300005544 Ga0070686_100000045 Ga0070686_10000004559 568
258 3300005548 Ga0070665_100000042 Ga0070665_100000042230 568
259 3300005841 Ga0068863_100000239 Ga0068863_10000023951 568
260 3300005843 Ga0068860_100000182 Ga0068860_10000018260 568
261 3300005844 Ga0068862_100000392 Ga0068862_10000039250 568
262 3300009177 Ga0105248_10020042 Ga0105248_100200424 568
263 3300013105 Ga0157369_10036491 Ga0157369_100364914 568
264 3300014326 Ga0157380_10001315 Ga0157380_100013155 568
265 3300014968 Ga0157379_10036983 Ga0157379_100369834 568
266 3300017792 Ga0163161_10000202 Ga0163161_1000020237 568
267 3300025903 Ga0207680_10000012 Ga0207680_10000012228 568
268 3300025914 Ga0207671_10000358 Ga0207671_1000035865 568
269 3300025923 Ga0207681_10000076 Ga0207681_1000007652 568
270 3300025931 Ga0207644_10000254 Ga0207644_1000025420 568
271 3300025961 Ga0207712_10000021 Ga0207712_10000021228 568
272 3300025972 Ga0207668_10017228 Ga0207668_100172286 568
273 3300026035 Ga0207703_10007577 Ga0207703_100075772 568
274 3300026118 Ga0207675_100000227 Ga0207675_10000022713 568
275 3300028379 Ga0268266_10000054 Ga0268266_10000054227 568
276 3300028380 Ga0268265_10000278 Ga0268265_1000027854 568
277 3300028381 Ga0268264_10000074 Ga0268264_10000074228 568
278 3300031731 Ga0307405_10028429 Ga0307405_100284291 568
279 3300031911 Ga0307412_10005076 Ga0307412_100050763 568
280 3300049515 Ga0501292_000330 Ga0501292_000330_1880_3592 568
281 3300049653 Ga0501206_000836 Ga0501206_000836_989_2701 568
282 3300049663 Ga0501223_001165 Ga0501223_001165_158_1870 568
283 3300049690 Ga0501261_000343 Ga0501261_000343_2958_4670 568
284 3300049775 Ga0501279_000008 Ga0501279_000008_38139_39851 568
285 3300049776 Ga0501280_000013 Ga0501280_000013_45818_47530 568
286 3300049778 Ga0501282_000323 Ga0501282_000323_2579_4291 568
287 3300053087 Ga0500643_000259 Ga0500643_000259_34873_36579 568

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02096

60KD_IMP

60Kd inner membrane protein

408

605

0.93

PF14849

YidC_periplas

YidC periplasmic domain

108

397

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wo6-assembly1.cif.gz_A crystal structure of yidc from bacillus halodurans (form i) 0.8448 338 552
3wvf-assembly1.cif.gz_A crystal structure of yidc from escherichia coli 0.8423 74 551
3bs6-assembly2.cif.gz_B 1.8 angstrom crystal structure of the periplasmic domain of the membrane insertase yidc 0.8361 72 335
3bs6-assembly1.cif.gz_A 1.8 angstrom crystal structure of the periplasmic domain of the membrane insertase yidc 0.8347 74 335
3wvf-assembly1.cif.gz_A crystal structure of yidc from escherichia coli 0.8326 74 551
ID Description Score Start End Superfamily
3bs6A00 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.827 74 335 2.70.98.90
3bs6A00 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.821 74 335 2.70.98.90
af_Q7XPZ3_1_137_3.30.1460.20 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.7189 155 188 3.30.1460.20
af_A0A1D6DVH2_28_349_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.6453 71 312 2.70.98.10
af_A0A1D6NGV4_102_355_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.6445 127 312 2.70.98.10
ID Description Score Start End GO Terms
AF-A0A258BK39-F1-model_v4 Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) 0.9507 62 419 GO:0005886
GO:0015031
GO:0032977
GO:0051205
AF-A0A258BK39-F1-model_v4 Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) 0.9456 62 419 GO:0005886
GO:0015031
GO:0032977
GO:0051205
AF-X1AI19-F1-model_v4 Membrane insertase YidC/Oxa/ALB C-terminal domain-containing protein 0.9313 343 446 GO:0005886
GO:0032977
GO:0051205
AF-A0A519L5T7-F1-model_v4 Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) 0.9246 61 230 GO:0005886
GO:0015031
AF-A0A355RL59-F1-model_v4 Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) 0.9211 73 505 GO:0005886
GO:0015031
GO:0032977
GO:0051205

Feature Viewer

pLDDT pTM Quality
74.21 0.69 Medium
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Predicted Structure (AlphaFold2)

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