F387797

General Info

Members Datasets Scaffolds Average Seq Length
287 170 259 364

Family's Representative Sequence

Representative Sequence 3300005288|Ga0065714_10082774|Ga0065714_100827741
Length 385
Sequence MNPKKYSNTKATLAIAKASFRSILRSPSAVVFTLAFPLIFIIVFANIGGGGVTVDVGVAKNSDTSNVVYSALKAVKVVHLITDQTTDEMNANLSKGTIDVILNIKNNKRPDNKSTGWTLYPPLSAIRQKPHLTINVQYTKASGEKGNIFRSVLSNIYYQINSVALGEYTSGMAEIKETTVSGREYKYIDFILPGQLGFSILSSGVFGTAFVFLSLRLTLVIKRFFATPVKRSSIVLGEALARITFSLLGALFIILVGHYLFGFTLIHGIITVLNMLVLSTMGLIIFMGFGFIISGIAKNESTVPPLSNIITMPQFLLSGTFFSVTAFPKWLQAVSNVLPLTHLNNAMRKVAFEGAGLGDVTHQLLILLIWFVATYAVAVKTFKWE

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738541302 Pedobacter sp. CF074 Isolate Unclassified
6 2738543023 Pedobacter sp. OK628 Isolate Unclassified
7 2739367651 Pedobacter sp. OK291 Isolate Unclassified
8 2739367656 Pedobacter sp. CF523 Isolate Unclassified
9 2739367663 Pedobacter sp. YR510 Isolate Unclassified
10 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
11 2818991437 Pedobacter terrae 518 Isolate Unclassified
12 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
13 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
14 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
15 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
16 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
17 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
18 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
19 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
20 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
21 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
22 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
23 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
24 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
25 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
26 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
27 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
28 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
29 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
30 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
31 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
32 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
33 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
34 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
40 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
41 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
42 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
44 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
45 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
46 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
47 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
48 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
49 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
50 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
51 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
52 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
53 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
54 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
55 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
56 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
57 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
58 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
59 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
60 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
63 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
64 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
65 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
67 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
68 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
85 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
86 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
87 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
88 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
89 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
90 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
91 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
94 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
95 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
96 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
97 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
127 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
128 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
129 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
130 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
131 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
132 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
141 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
144 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
145 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
148 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
149 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
152 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
163 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
168 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.9
Metatranscriptomes 0.35
Isolates 9.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.45
Nodule 0
Rhizoplane 0.35
Rhizosphere 78.4
Stem 0
Stem Tuber 0
Unclassified 10.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10015436 3300001989 Bacteria 2775
2 JGI24735J21928_10000009 3300002067 Bacteria 247425
3 JGI24735J21928_10000036 3300002067 Bacteria 65596
4 JGI25162J39368_1000039 3300002737 Bacteria 175976
5 JGI25162J39368_1001763 3300002737 Bacteria 10299
6 JGI25152J39213_1000208 3300002773 Bacteria 39726
7 JGI25150J39212_1000014 3300002774 Bacteria 170955
8 JGI25151J46595_10000042 3300003187 Bacteria 170955
9 JGI25165J46597_1001210 3300003214 Bacteria 15558
10 JGI25153J46596_10000009 3300003215 Bacteria 340925
11 rootH1_10109985 3300003316 Bacteria 3601
12 rootH1_10118820 3300003316 Bacteria 1393
13 rootH2_10006136 3300003320 Bacteria 3007
14 rootH2_10012931 3300003320 Bacteria 16278
15 rootH1_10015584 3300003323 Bacteria 15010
16 rootH1_10084187 3300003323 Bacteria 7593
17 rootH1_10092206 3300003323 Bacteria 6162
18 rootH1_10126859 3300003323 Bacteria 2751
19 Ga0055536_1000019 3300003781 Bacteria 203087
20 Ga0058863_11770406 3300004799 Bacteria 2029
21 Ga0065714_10003460 3300005288 Bacteria 22330
22 Ga0065714_10064590 3300005288 Bacteria 31027
23 Ga0065714_10064771 3300005288 Bacteria 19322
24 Ga0065714_10076320 3300005288 Bacteria 2804
25 Ga0065714_10082774 3300005288 Bacteria 2288
26 Ga0070658_10000041 3300005327 Bacteria 134208
27 Ga0070658_10163126 3300005327 Bacteria 1870
28 Ga0070676_10004846 3300005328 Bacteria 7121
29 Ga0070677_10071590 3300005333 Bacteria 1460
30 Ga0068868_100227495 3300005338 Bacteria 1564
31 Ga0070660_100017853 3300005339 Bacteria 5175
32 Ga0070689_100071180 3300005340 Bacteria 2716
33 Ga0070671_100014392 3300005355 Bacteria 6392
34 Ga0070673_100116750 3300005364 Bacteria 2220
35 Ga0070659_100000094 3300005366 Bacteria 66823
36 Ga0070659_100005342 3300005366 Bacteria 9217
37 Ga0070659_100140998 3300005366 Bacteria 1962
38 Ga0070678_100183690 3300005456 Bacteria 1714
39 Ga0070662_100014656 3300005457 Bacteria 5240
40 Ga0070681_10000745 3300005458 Bacteria 27011
41 Ga0070679_100016279 3300005530 Bacteria 7166
42 Ga0070679_100280751 3300005530 Bacteria 1618
43 Ga0068853_100141660 3300005539 Bacteria 2159
44 Ga0068853_100183056 3300005539 Bacteria 1901
45 Ga0070665_100000147 3300005548 Bacteria 129683
46 Ga0068855_100000009 3300005563 Bacteria 246035
47 Ga0068855_100017030 3300005563 Bacteria 8742
48 Ga0068855_100032435 3300005563 Bacteria 6237
49 Ga0068855_100077278 3300005563 Bacteria 3862
50 Ga0068855_100154984 3300005563 Bacteria 2603
51 Ga0068854_100024983 3300005578 Bacteria 4098
52 Ga0068856_100001199 3300005614 Bacteria 27292
53 Ga0068856_100074635 3300005614 Bacteria 3358
54 Ga0068856_100187017 3300005614 Bacteria 2085
55 Ga0068852_100154814 3300005616 Bacteria 2134
56 Ga0068866_10125147 3300005718 Bacteria 1454
57 Ga0068860_100043527 3300005843 Bacteria 4283
58 Ga0075366_10000199 3300006195 Bacteria 26493
59 Ga0075366_10000458 3300006195 Bacteria 18985
60 Ga0075366_10010964 3300006195 Bacteria 5102
61 Ga0097621_100002307 3300006237 Bacteria 13071
62 Ga0068871_100006651 3300006358 Bacteria 8199
63 Ga0068871_100063075 3300006358 Bacteria 3030
64 Ga0068865_100003134 3300006881 Bacteria 9893
65 Ga0105244_10086862 3300009036 Bacteria 1541
66 Ga0105240_10007945 3300009093 Bacteria 15307
67 Ga0105240_10010208 3300009093 Bacteria 13217
68 Ga0105240_10052915 3300009093 Bacteria 5101
69 Ga0105240_10073497 3300009093 Bacteria 4222
70 Ga0105240_10516691 3300009093 Bacteria 1326
71 Ga0105240_10608418 3300009093 Bacteria 1202
72 Ga0105245_10157215 3300009098 Bacteria 2154
73 Ga0105243_10141017 3300009148 Bacteria 2056
74 Ga0105242_10004303 3300009176 Bacteria 11098
75 Ga0105237_10002047 3300009545 Bacteria 25648
76 Ga0105237_10007457 3300009545 Bacteria 11970
77 Ga0105237_10014597 3300009545 Bacteria 8207
78 Ga0105237_10026046 3300009545 Bacteria 5977
79 Ga0105237_10030103 3300009545 Bacteria 5515
80 Ga0105237_10131574 3300009545 Bacteria 2496
81 Ga0105237_10362110 3300009545 Bacteria 1455
82 Ga0105238_10011246 3300009551 Bacteria 9007
83 Ga0105238_10065336 3300009551 Bacteria 3639
84 Ga0105239_10000009 3300010375 Bacteria 361182
85 Ga0105239_10000345 3300010375 Bacteria 67861
86 Ga0105239_10020486 3300010375 Bacteria 7295
87 Ga0105239_10028430 3300010375 Bacteria 6150
88 Ga0105239_10254968 3300010375 Bacteria 1971
89 Ga0105239_10260454 3300010375 Bacteria 1949
90 Ga0157373_10000034 3300013100 Bacteria 124053
91 Ga0157373_10002086 3300013100 Bacteria 15140
92 Ga0157371_10000220 3300013102 Bacteria 83813
93 Ga0157371_10002091 3300013102 Bacteria 19502
94 Ga0157371_10010755 3300013102 Bacteria 7107
95 Ga0157371_10062789 3300013102 Bacteria 2633
96 Ga0157371_10205942 3300013102 Bacteria 1411
97 Ga0157370_10001898 3300013104 Bacteria 25725
98 Ga0157370_10016508 3300013104 Bacteria 7471
99 Ga0157370_10036637 3300013104 Bacteria 4758
100 Ga0157370_10058059 3300013104 Bacteria 3678
101 Ga0157370_10062939 3300013104 Bacteria 3517
102 Ga0157370_10069130 3300013104 Bacteria 3336
103 Ga0157370_10084104 3300013104 Bacteria 2991
104 Ga0157370_10250458 3300013104 Bacteria 1638
105 Ga0157369_10000031 3300013105 Bacteria 203214
106 Ga0157369_10005281 3300013105 Bacteria 15054
107 Ga0157369_10299666 3300013105 Bacteria 1672
108 Ga0157374_10002392 3300013296 Bacteria 15821
109 Ga0157374_10009739 3300013296 Bacteria 8251
110 Ga0157374_10023271 3300013296 Bacteria 5539
111 Ga0157374_10320171 3300013296 Bacteria 1537
112 Ga0163162_10000093 3300013306 Bacteria 82738
113 Ga0163162_10001293 3300013306 Bacteria 23397
114 Ga0163162_10003002 3300013306 Bacteria 16127
115 Ga0163162_10152427 3300013306 Bacteria 2430
116 Ga0157372_10000099 3300013307 Bacteria 89946
117 Ga0157372_10000632 3300013307 Bacteria 38535
118 Ga0157372_10025953 3300013307 Bacteria 6373
119 Ga0157375_10021380 3300013308 Bacteria 5931
120 Ga0157375_10147797 3300013308 Bacteria 2482
121 Ga0182008_10000034 3300014497 Bacteria 138235
122 Ga0182008_10000157 3300014497 Bacteria 53598
123 Ga0182008_10115033 3300014497 Unclassified 1334
124 Ga0157377_10101373 3300014745 Bacteria 1716
125 Ga0157376_10029976 3300014969 Bacteria 4337
126 Ga0157376_10199736 3300014969 Bacteria 1839
127 Ga0182006_1000173 3300015261 Bacteria 67776
128 Ga0182006_1004929 3300015261 Bacteria 6457
129 Ga0182007_10000002 3300015262 Bacteria 564661
130 Ga0182007_10047882 3300015262 Bacteria 1413
131 Ga0183373_1004 3300015682 Bacteria 537398
132 Ga0163161_10000445 3300017792 Bacteria 34489
133 Ga0163161_10000500 3300017792 Bacteria 32187
134 Ga0163161_10009014 3300017792 Bacteria 6900
135 Ga0163161_10042784 3300017792 Bacteria 3259
136 Ga0163161_10213651 3300017792 Bacteria 1491
137 Ga0207427_100323 3300025231 Bacteria 32232
138 Ga0209437_100093 3300025233 Bacteria 239733
139 Ga0209437_100135 3300025233 Bacteria 176455
140 Ga0207425_1000023 3300025245 Bacteria 341339
141 Ga0209026_1000419 3300025250 Bacteria 36170
142 Ga0209026_1001598 3300025250 Bacteria 9719
143 Ga0209026_1001946 3300025250 Bacteria 8321
144 Ga0209129_1000032 3300025258 Bacteria 341150
145 Ga0209233_1000486 3300025261 Bacteria 24139
146 Ga0209676_1000009 3300025292 Bacteria 981719
147 Ga0209025_1000047 3300025294 Bacteria 341150
148 Ga0209758_1000145 3300025297 Bacteria 170553
149 Ga0209050_1000094 3300025298 Bacteria 242893
150 Ga0207642_10038511 3300025899 Bacteria 2070
151 Ga0207647_10001051 3300025904 Bacteria 21270
152 Ga0207645_10003611 3300025907 Bacteria 11703
153 Ga0207705_10000068 3300025909 Bacteria 134316
154 Ga0207654_10053800 3300025911 Bacteria 2325
155 Ga0207707_10108651 3300025912 Bacteria 2425
156 Ga0207695_10007360 3300025913 Bacteria 14047
157 Ga0207695_10012940 3300025913 Bacteria 9979
158 Ga0207695_10016019 3300025913 Bacteria 8799
159 Ga0207695_10291530 3300025913 Bacteria 1524
160 Ga0207671_10002281 3300025914 Bacteria 20744
161 Ga0207671_10006618 3300025914 Bacteria 10279
162 Ga0207671_10011408 3300025914 Bacteria 7239
163 Ga0207671_10012004 3300025914 Bacteria 7000
164 Ga0207671_10038627 3300025914 Bacteria 3538
165 Ga0207660_10023218 3300025917 Bacteria 4188
166 Ga0207657_10047929 3300025919 Bacteria 3732
167 Ga0207652_10034195 3300025921 Bacteria 4282
168 Ga0207694_10025015 3300025924 Bacteria 4537
169 Ga0207687_10337377 3300025927 Bacteria 1224
170 Ga0207644_10009650 3300025931 Bacteria 6342
171 Ga0207690_10000280 3300025932 Bacteria 36230
172 Ga0207690_10070483 3300025932 Unclassified 2408
173 Ga0207706_10000694 3300025933 Bacteria 35171
174 Ga0207670_10074322 3300025936 Bacteria 2359
175 Ga0207704_10000036 3300025938 Bacteria 94574
176 Ga0207667_10000045 3300025949 Bacteria 246053
177 Ga0207667_10001978 3300025949 Bacteria 25682
178 Ga0207667_10008452 3300025949 Bacteria 12227
179 Ga0207667_10065191 3300025949 Bacteria 3800
180 Ga0207640_10015144 3300025981 Bacteria 4457
181 Ga0207677_10015881 3300026023 Bacteria 4444
182 Ga0207639_10047167 3300026041 Bacteria 3254
183 Ga0207639_10061245 3300026041 Bacteria 2905
184 Ga0207639_10088905 3300026041 Bacteria 2467
185 Ga0207702_10006949 3300026078 Bacteria 9693
186 Ga0207702_10038486 3300026078 Bacteria 4005
187 Ga0207702_10369164 3300026078 Unclassified 1377
188 Ga0207683_10023151 3300026121 Bacteria 5337
189 Ga0207683_10049502 3300026121 Bacteria 3679
190 Ga0268266_10000603 3300028379 Bacteria 49111
191 Ga0307517_10000571 3300028786 Bacteria 62870
192 Ga0307515_10001136 3300028794 Bacteria 61007
193 Ga0307515_10003664 3300028794 Bacteria 32272
194 Ga0265327_10122619 3300031251 Bacteria 1230
195 Ga0307509_10111456 3300031507 Bacteria 2739
196 Ga0307508_10011571 3300031616 Bacteria 8061
197 Ga0307405_10000015 3300031731 Bacteria 206299
198 Ga0307407_10000027 3300031903 Bacteria 107307
199 Ga0307416_100000002 3300032002 Bacteria 509907
200 Ga0307414_10007740 3300032004 Bacteria 6053
201 Ga0395899_0000002 3300037312 Bacteria 1324310
202 Ga0395899_0000569 3300037312 Bacteria 39364
203 Ga0395899_0093457 3300037312 Bacteria 2177
204 Ga0395900_0000441 3300037418 Bacteria 59413
205 Ga0395900_0005172 3300037418 Bacteria 13699
206 Ga0395900_0008053 3300037418 Bacteria 10850
207 Ga0395898_0027634 3300037466 Bacteria 5691
208 Ga0395905_0000971 3300037471 Bacteria 36768
209 Ga0395905_0002190 3300037471 Bacteria 22056
210 Ga0395901_0000706 3300038443 Bacteria 38128
211 Ga0395901_0064226 3300038443 Bacteria 3821
212 Ga0436361_0153467 3300039447 Bacteria 3514
213 Ga0466969_0100606 3300044656 Bacteria 1361
214 Ga0466959_0015637 3300045049 Bacteria 5533
215 Ga0466959_0050293 3300045049 Bacteria 3060
216 Ga0495651_0156714 3300046462 Bacteria 1636
217 Ga0495650_0000023 3300046471 Bacteria 527763
218 Ga0495585_0000065 3300046492 Bacteria 108945
219 Ga0495585_0000268 3300046492 Bacteria 52128
220 Ga0495606_0000264 3300046507 Bacteria 92733
221 Ga0495606_0017383 3300046507 Bacteria 5438
222 Ga0495606_0041825 3300046507 Bacteria 3071
223 Ga0495610_0000232 3300046512 Bacteria 59379
224 Ga0495610_0000868 3300046512 Bacteria 28267
225 Ga0495610_0001102 3300046512 Bacteria 24590
226 Ga0495616_0000743 3300046513 Bacteria 23851
227 Ga0495616_0038240 3300046513 Bacteria 2465
228 Ga0495631_0019683 3300046518 Bacteria 3164
229 Ga0495648_0001997 3300046524 Bacteria 19320
230 Ga0495609_0003038 3300046538 Bacteria 9878
231 Ga0495609_0014760 3300046538 Bacteria 3667
232 Ga0495633_0000032 3300046558 Bacteria 193765
233 Ga0495668_0000009 3300046616 Bacteria 492623
234 Ga0495668_0087210 3300046616 Bacteria 1712
235 Ga0495625_0000211 3300046660 Bacteria 92222
236 Ga0495625_0001964 3300046660 Bacteria 23219
237 Ga0495625_0003233 3300046660 Bacteria 16491
238 Ga0495625_0053177 3300046660 Bacteria 2898
239 Ga0495625_0150974 3300046660 Bacteria 1562
240 Ga0495661_0000555 3300046665 Bacteria 38650
241 Ga0495661_0029914 3300046665 Bacteria 3472
242 Ga0495658_0005234 3300046683 Bacteria 6383
243 Ga0495649_0000090 3300046694 Bacteria 78509
244 Ga0495672_0062401 3300047320 Unclassified 2144
245 Ga0495687_001641 3300047443 Bacteria 20132
246 Ga0495686_0001404 3300047472 Bacteria 26590
247 Ga0495686_0085574 3300047472 Bacteria 1919
248 Ga0501034_0000225 3300049571 Bacteria 107163
249 Ga0501241_007137 3300049758 Bacteria 2048
250 Ga0501280_000029 3300049776 Bacteria 45812
251 nmdc:mga0k408_1631_c2 3300050493 Bacteria 4915
252 nmdc:mga0k408_354_c1 3300050493 Bacteria 25193
253 nmdc:mga0k408_61_c1 3300050493 Bacteria 53671
254 Ga0500635_0001467 3300053080 Bacteria 5669
255 Ga0500651_0001356 3300053093 Bacteria 12276
256 Ga0500608_038522 3300053122 Bacteria 2287
257 Ga0500618_000079 3300053125 Bacteria 79415
258 Ga0500622_0000312 3300053156 Bacteria 49537
259 Ga0500624_001224 3300053157 Bacteria 4581

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005364 Ga0070673_100116750 Ga0070673_1001167502 285
2 3300025949 Ga0207667_10065191 Ga0207667_100651912 307
3 3300047472 Ga0495686_0085574 Ga0495686_0085574_19_993 324
4 3300005563 Ga0068855_100154984 Ga0068855_1001549842 328
5 3300006358 Ga0068871_100063075 Ga0068871_1000630752 328
6 3300010375 Ga0105239_10000345 Ga0105239_1000034533 328
7 3300031251 Ga0265327_10122619 Ga0265327_101226191 332
8 3300053080 Ga0500635_0001467 Ga0500635_0001467_1485_2624 333
9 3300014969 Ga0157376_10029976 Ga0157376_100299763 334
10 3300005539 Ga0068853_100141660 Ga0068853_1001416602 336
11 3300005548 Ga0070665_100000147 Ga0070665_10000014733 336
12 3300005563 Ga0068855_100017030 Ga0068855_1000170306 336
13 3300009093 Ga0105240_10007945 Ga0105240_1000794516 336
14 3300013104 Ga0157370_10016508 Ga0157370_100165083 336
15 3300013306 Ga0163162_10001293 Ga0163162_100012935 336
16 3300025913 Ga0207695_10012940 Ga0207695_100129408 336
17 3300026041 Ga0207639_10088905 Ga0207639_100889052 336
18 3300028379 Ga0268266_10000603 Ga0268266_1000060334 336
19 3300046616 Ga0495668_0087210 Ga0495668_0087210_163_1257 336
20 3300013104 Ga0157370_10069130 Ga0157370_100691301 337
21 3300009098 Ga0105245_10157215 Ga0105245_101572152 338
22 3300025927 Ga0207687_10337377 Ga0207687_103373771 338
23 3300053156 Ga0500622_0000312 Ga0500622_0000312_18435_19568 339
24 3300045049 Ga0466959_0015637 Ga0466959_0015637_1757_2881 341
25 3300013104 Ga0157370_10062939 Ga0157370_100629392 342
26 3300015262 Ga0182007_10000002 Ga0182007_1000000297 342
27 3300047320 Ga0495672_0062401 Ga0495672_0062401_59_1162 343
28 3300013296 Ga0157374_10009739 Ga0157374_100097392 344
29 3300003320 rootH2_10012931 rootH2_100129311 345
30 3300005288 Ga0065714_10064590 Ga0065714_1006459020 345
31 3300005339 Ga0070660_100017853 Ga0070660_1000178532 345
32 3300005366 Ga0070659_100000094 Ga0070659_10000009418 345
33 3300009036 Ga0105244_10086862 Ga0105244_100868622 345
34 3300013102 Ga0157371_10000220 Ga0157371_100002204 345
35 3300015261 Ga0182006_1004929 Ga0182006_10049296 345
36 3300025919 Ga0207657_10047929 Ga0207657_100479295 345
37 3300025932 Ga0207690_10000280 Ga0207690_100002809 345
38 3300046512 Ga0495610_0000868 Ga0495610_0000868_17233_18309 345
39 3300003781 Ga0055536_1000019 Ga0055536_100001983 346
40 3300009148 Ga0105243_10141017 Ga0105243_101410171 346
41 3300013104 Ga0157370_10036637 Ga0157370_100366374 346
42 3300013296 Ga0157374_10320171 Ga0157374_103201712 346
43 3300025292 Ga0209676_1000009 Ga0209676_100000998 346
44 3300025298 Ga0209050_1000094 Ga0209050_100009498 346
45 3300031903 Ga0307407_10000027 Ga0307407_1000002758 346
46 3300032002 Ga0307416_100000002 Ga0307416_10000000284 346
47 3300032004 Ga0307414_10007740 Ga0307414_100077402 346
48 3300046518 Ga0495631_0019683 Ga0495631_0019683_57_1190 346
49 3300046660 Ga0495625_0053177 Ga0495625_0053177_465_1598 346
50 3300053122 Ga0500608_038522 Ga0500608_038522_870_2003 346
51 3300005328 Ga0070676_10004846 Ga0070676_100048465 347
52 3300005338 Ga0068868_100227495 Ga0068868_1002274951 347
53 3300005355 Ga0070671_100014392 Ga0070671_1000143925 347
54 3300005366 Ga0070659_100140998 Ga0070659_1001409982 347
55 3300005457 Ga0070662_100014656 Ga0070662_1000146564 347
56 3300005616 Ga0068852_100154814 Ga0068852_1001548141 347
57 3300005718 Ga0068866_10125147 Ga0068866_101251471 347
58 3300006237 Ga0097621_100002307 Ga0097621_1000023074 347
59 3300006358 Ga0068871_100006651 Ga0068871_1000066516 347
60 3300006881 Ga0068865_100003134 Ga0068865_1000031346 347
61 3300009093 Ga0105240_10010208 Ga0105240_1001020811 347
62 3300009176 Ga0105242_10004303 Ga0105242_1000430311 347
63 3300009545 Ga0105237_10131574 Ga0105237_101315742 347
64 3300009551 Ga0105238_10011246 Ga0105238_100112462 347
65 3300010375 Ga0105239_10254968 Ga0105239_102549682 347
66 3300013105 Ga0157369_10299666 Ga0157369_102996662 347
67 3300013296 Ga0157374_10002392 Ga0157374_1000239214 347
68 3300013296 Ga0157374_10023271 Ga0157374_100232715 347
69 3300013308 Ga0157375_10021380 Ga0157375_100213804 347
70 3300014745 Ga0157377_10101373 Ga0157377_101013731 347
71 3300014969 Ga0157376_10199736 Ga0157376_101997362 347
72 3300017792 Ga0163161_10213651 Ga0163161_102136512 347
73 3300025899 Ga0207642_10038511 Ga0207642_100385112 347
74 3300025904 Ga0207647_10001051 Ga0207647_100010511 347
75 3300025907 Ga0207645_10003611 Ga0207645_100036119 347
76 3300025913 Ga0207695_10007360 Ga0207695_100073601 347
77 3300025914 Ga0207671_10038627 Ga0207671_100386271 347
78 3300025931 Ga0207644_10009650 Ga0207644_100096502 347
79 3300025933 Ga0207706_10000694 Ga0207706_100006943 347
80 3300025938 Ga0207704_10000036 Ga0207704_1000003617 347
81 3300026023 Ga0207677_10015881 Ga0207677_100158811 347
82 3300026121 Ga0207683_10049502 Ga0207683_100495022 347
83 3300028786 Ga0307517_10000571 Ga0307517_1000057120 347
84 3300037418 Ga0395900_0005172 Ga0395900_0005172_447_1544 347
85 3300037466 Ga0395898_0027634 Ga0395898_0027634_3129_4226 347
86 3300037471 Ga0395905_0002190 Ga0395905_0002190_18108_19205 347
87 3300038443 Ga0395901_0000706 Ga0395901_0000706_4795_5892 347
88 3300047443 Ga0495687_001641 Ga0495687_001641_13480_14577 347
89 3300005539 Ga0068853_100183056 Ga0068853_1001830561 348
90 3300015261 Ga0182006_1000173 Ga0182006_100017341 348
91 3300026041 Ga0207639_10047167 Ga0207639_100471671 348
92 3300039447 Ga0436361_0153467 Ga0436361_0153467_408_1559 348
93 3300046507 Ga0495606_0017383 Ga0495606_0017383_2432_3526 348
94 3300003316 rootH1_10118820 rootH1_101188201 349
95 3300003323 rootH1_10084187 rootH1_100841871 349
96 3300005288 Ga0065714_10076320 Ga0065714_100763202 349
97 3300005327 Ga0070658_10000041 Ga0070658_100000416 349
98 3300005530 Ga0070679_100280751 Ga0070679_1002807511 349
99 3300005563 Ga0068855_100032435 Ga0068855_1000324351 349
100 3300013104 Ga0157370_10001898 Ga0157370_1000189813 349
101 3300013105 Ga0157369_10000031 Ga0157369_1000003166 349
102 3300013306 Ga0163162_10000093 Ga0163162_1000009313 349
103 3300015682 Ga0183373_1004 Ga0183373_1004380 349
104 3300025909 Ga0207705_10000068 Ga0207705_10000068117 349
105 3300025949 Ga0207667_10008452 Ga0207667_100084526 349
106 3300031731 Ga0307405_10000015 Ga0307405_1000001572 349
107 3300037312 Ga0395899_0000002 Ga0395899_0000002_289390_290523 349
108 3300005327 Ga0070658_10163126 Ga0070658_101631262 350
109 3300013100 Ga0157373_10000034 Ga0157373_1000003489 350
110 3300017792 Ga0163161_10000445 Ga0163161_100004454 350
111 3300017792 Ga0163161_10009014 Ga0163161_100090143 350
112 3300046512 Ga0495610_0000232 Ga0495610_0000232_4899_6020 350
113 iso_pu_bacteria 2739367651 2739588253 350
114 iso_pu_bacteria 2818991437 2819546221 350
115 iso_pu_bacteria 2849281842 2849282758 350
116 iso_pu_bacteria 2954016120 2954021705 350
117 3300003323 rootH1_10126859 rootH1_101268592 351
118 3300005366 Ga0070659_100005342 Ga0070659_1000053423 351
119 3300013102 Ga0157371_10010755 Ga0157371_100107552 351
120 3300013307 Ga0157372_10000099 Ga0157372_1000009941 351
121 3300025932 Ga0207690_10070483 Ga0207690_100704833 351
122 3300037312 Ga0395899_0000569 Ga0395899_0000569_19572_20675 351
123 3300049776 Ga0501280_000029 Ga0501280_000029_24183_25289 351
124 3300013105 Ga0157369_10005281 Ga0157369_100052812 352
125 3300025250 Ga0209026_1001598 Ga0209026_10015982 352
126 3300045049 Ga0466959_0050293 Ga0466959_0050293_1828_2970 352
127 3300005288 Ga0065714_10064771 Ga0065714_100647712 353
128 3300009545 Ga0105237_10014597 Ga0105237_100145978 353
129 3300013100 Ga0157373_10002086 Ga0157373_100020867 353
130 3300014497 Ga0182008_10000034 Ga0182008_1000003481 353
131 3300017792 Ga0163161_10042784 Ga0163161_100427842 353
132 3300044656 Ga0466969_0100606 Ga0466969_0100606_109_1251 353
133 3300046538 Ga0495609_0014760 Ga0495609_0014760_444_1535 353
134 iso_pu_bacteria 2585427687 2586206258 353
135 iso_pu_bacteria 2738541302 2738856191 353
136 iso_pu_bacteria 2739367663 2739648500 353
137 iso_pu_bacteria 2842722452 2842723943 353
138 iso_pu_bacteria 2842909656 2842912325 353
139 iso_pu_bacteria 2857627736 2857629334 353
140 iso_pu_bacteria 2904445276 2904446500 353
141 iso_pu_bacteria 2945997725 2945999309 353
142 3300013307 Ga0157372_10000632 Ga0157372_1000063214 354
143 3300025250 Ga0209026_1001946 Ga0209026_10019466 354
144 3300002773 JGI25152J39213_1000208 JGI25152J39213_10002088 355
145 3300002774 JGI25150J39212_1000014 JGI25150J39212_1000014100 355
146 3300003187 JGI25151J46595_10000042 JGI25151J46595_10000042100 355
147 3300003215 JGI25153J46596_10000009 JGI25153J46596_10000009100 355
148 3300005340 Ga0070689_100071180 Ga0070689_1000711802 355
149 3300013104 Ga0157370_10084104 Ga0157370_100841042 355
150 3300014497 Ga0182008_10000157 Ga0182008_1000015716 355
151 3300017792 Ga0163161_10000500 Ga0163161_100005004 355
152 3300025245 Ga0207425_1000023 Ga0207425_100002399 355
153 3300025258 Ga0209129_1000032 Ga0209129_1000032174 355
154 3300025294 Ga0209025_1000047 Ga0209025_1000047174 355
155 3300025297 Ga0209758_1000145 Ga0209758_100014599 355
156 iso_pu_bacteria 2738541283 2738755605 355
157 iso_pu_bacteria 2738541284 2738762184 355
158 iso_pu_bacteria 2738543023 2739303489 355
159 iso_pu_bacteria 2739367656 2739613972 355
160 iso_pu_bacteria 2775506987 2776615193 355
161 iso_pu_bacteria 2852627209 2852629201 355
162 iso_pu_bacteria 2919186247 2919189216 355
163 iso_pu_bacteria 2939664404 2939666629 355
164 3300005333 Ga0070677_10071590 Ga0070677_100715901 356
165 3300005456 Ga0070678_100183690 Ga0070678_1001836902 356
166 3300009551 Ga0105238_10065336 Ga0105238_100653362 356
167 3300025924 Ga0207694_10025015 Ga0207694_100250152 356
168 3300026121 Ga0207683_10023151 Ga0207683_100231515 356
169 iso_pu_bacteria 2977232053 2977235931 356
170 3300031616 Ga0307508_10011571 Ga0307508_100115715 357
171 3300005288 Ga0065714_10003460 Ga0065714_100034602 358
172 3300013102 Ga0157371_10002091 Ga0157371_1000209113 358
173 3300013102 Ga0157371_10205942 Ga0157371_102059422 358
174 3300013104 Ga0157370_10058059 Ga0157370_100580592 358
175 3300014497 Ga0182008_10115033 Ga0182008_101150331 358
176 3300015262 Ga0182007_10047882 Ga0182007_100478821 358
177 3300025250 Ga0209026_1000419 Ga0209026_100041924 358
178 3300049571 Ga0501034_0000225 Ga0501034_0000225_42767_43924 358
179 3300049758 Ga0501241_007137 Ga0501241_007137_825_1916 358
180 3300053093 Ga0500651_0001356 Ga0500651_0001356_3765_4856 358
181 iso_pu_bacteria 2919437846 2919442889 358
182 3300005614 Ga0068856_100074635 Ga0068856_1000746352 359
183 3300026078 Ga0207702_10038486 Ga0207702_100384862 359
184 3300037312 Ga0395899_0093457 Ga0395899_0093457_684_1784 359
185 3300037418 Ga0395900_0008053 Ga0395900_0008053_2843_3943 359
186 3300037471 Ga0395905_0000971 Ga0395905_0000971_33922_35022 359
187 3300038443 Ga0395901_0064226 Ga0395901_0064226_1937_3037 359
188 3300002737 JGI25162J39368_1001763 JGI25162J39368_10017639 360
189 3300003214 JGI25165J46597_1001210 JGI25165J46597_10012109 360
190 3300003320 rootH2_10006136 rootH2_100061362 360
191 3300003323 rootH1_10092206 rootH1_100922063 360
192 3300005614 Ga0068856_100187017 Ga0068856_1001870172 360
193 3300009545 Ga0105237_10002047 Ga0105237_100020473 360
194 3300025231 Ga0207427_100323 Ga0207427_1003239 360
195 3300025233 Ga0209437_100093 Ga0209437_1000938 360
196 3300025261 Ga0209233_1000486 Ga0209233_10004868 360
197 3300025914 Ga0207671_10002281 Ga0207671_1000228115 360
198 3300026041 Ga0207639_10061245 Ga0207639_100612453 360
199 3300026078 Ga0207702_10369164 Ga0207702_103691641 360
200 3300037418 Ga0395900_0000441 Ga0395900_0000441_55586_56689 360
201 3300046660 Ga0495625_0150974 Ga0495625_0150974_419_1516 360
202 3300053157 Ga0500624_001224 Ga0500624_001224_1210_2304 360
203 3300002737 JGI25162J39368_1000039 JGI25162J39368_1000039153 361
204 3300003323 rootH1_10015584 rootH1_1001558419 361
205 3300004799 Ga0058863_11770406 Ga0058863_117704061 361
206 3300005458 Ga0070681_10000745 Ga0070681_100007458 361
207 3300005530 Ga0070679_100016279 Ga0070679_1000162792 361
208 3300005563 Ga0068855_100077278 Ga0068855_1000772782 361
209 3300005578 Ga0068854_100024983 Ga0068854_1000249834 361
210 3300009093 Ga0105240_10052915 Ga0105240_100529151 361
211 3300009093 Ga0105240_10073497 Ga0105240_100734972 361
212 3300009093 Ga0105240_10516691 Ga0105240_105166911 361
213 3300009093 Ga0105240_10608418 Ga0105240_106084181 361
214 3300009545 Ga0105237_10007457 Ga0105237_1000745711 361
215 3300009545 Ga0105237_10026046 Ga0105237_100260461 361
216 3300009545 Ga0105237_10030103 Ga0105237_100301032 361
217 3300009545 Ga0105237_10362110 Ga0105237_103621101 361
218 3300010375 Ga0105239_10000009 Ga0105239_100000094 361
219 3300010375 Ga0105239_10020486 Ga0105239_100204862 361
220 3300010375 Ga0105239_10028430 Ga0105239_100284305 361
221 3300010375 Ga0105239_10260454 Ga0105239_102604542 361
222 3300013306 Ga0163162_10152427 Ga0163162_101524272 361
223 3300013308 Ga0157375_10147797 Ga0157375_101477972 361
224 3300025233 Ga0209437_100135 Ga0209437_10013529 361
225 3300025911 Ga0207654_10053800 Ga0207654_100538002 361
226 3300025912 Ga0207707_10108651 Ga0207707_101086512 361
227 3300025913 Ga0207695_10016019 Ga0207695_100160197 361
228 3300025913 Ga0207695_10291530 Ga0207695_102915301 361
229 3300025914 Ga0207671_10006618 Ga0207671_100066187 361
230 3300025914 Ga0207671_10011408 Ga0207671_100114082 361
231 3300025914 Ga0207671_10012004 Ga0207671_100120042 361
232 3300025917 Ga0207660_10023218 Ga0207660_100232183 361
233 3300025921 Ga0207652_10034195 Ga0207652_100341952 361
234 3300025949 Ga0207667_10001978 Ga0207667_100019784 361
235 3300025981 Ga0207640_10015144 Ga0207640_100151444 361
236 3300031507 Ga0307509_10111456 Ga0307509_101114563 361
237 3300046462 Ga0495651_0156714 Ga0495651_0156714_337_1437 361
238 3300046507 Ga0495606_0041825 Ga0495606_0041825_1532_2638 361
239 3300046513 Ga0495616_0038240 Ga0495616_0038240_487_1584 361
240 3300046665 Ga0495661_0000555 Ga0495661_0000555_24537_25649 361
241 3300047472 Ga0495686_0001404 Ga0495686_0001404_16301_17401 361
242 3300005288 Ga0065714_10082774 Ga0065714_100827741 362
243 3300005563 Ga0068855_100000009 Ga0068855_10000000946 362
244 3300005614 Ga0068856_100001199 Ga0068856_10000119924 362
245 3300025949 Ga0207667_10000045 Ga0207667_10000045186 362
246 3300026078 Ga0207702_10006949 Ga0207702_1000694911 362
247 3300028794 Ga0307515_10003664 Ga0307515_1000366426 363
248 3300046492 Ga0495585_0000268 Ga0495585_0000268_8483_9601 363
249 3300046524 Ga0495648_0001997 Ga0495648_0001997_17826_18944 363
250 3300046616 Ga0495668_0000009 Ga0495668_0000009_282269_283387 363
251 3300046660 Ga0495625_0001964 Ga0495625_0001964_10050_11168 363
252 3300046683 Ga0495658_0005234 Ga0495658_0005234_1794_2912 363
253 3300005843 Ga0068860_100043527 Ga0068860_1000435272 365
254 3300025936 Ga0207670_10074322 Ga0207670_100743222 365
255 3300053125 Ga0500618_000079 Ga0500618_000079_26358_27476 365
256 iso_pu_bacteria 2852623160 2852626723 368
257 iso_pu_bacteria 2884933994 2884934044 368
258 3300006195 Ga0075366_10000199 Ga0075366_100001995 369
259 3300050493 nmdc:mga0k408_61_c1 nmdc:mga0k408_61_c1_8568_9689 369
260 3300028794 Ga0307515_10001136 Ga0307515_1000113645 370
261 iso_pu_bacteria 2599185184 2599479286 370
262 iso_pu_bacteria 2928078545 2928082401 370
263 iso_pu_bacteria 2928147474 2928149014 370
264 iso_pu_bacteria 2932082852 2932087545 370
265 3300006195 Ga0075366_10000458 Ga0075366_1000045811 371
266 3300046538 Ga0495609_0003038 Ga0495609_0003038_1704_2822 371
267 3300046558 Ga0495633_0000032 Ga0495633_0000032_98576_99694 371
268 3300046660 Ga0495625_0003233 Ga0495625_0003233_6271_7404 371
269 3300050493 nmdc:mga0k408_354_c1 nmdc:mga0k408_354_c1_20272_21390 371
270 3300001989 JGI24739J22299_10015436 JGI24739J22299_100154362 374
271 3300002067 JGI24735J21928_10000009 JGI24735J21928_1000000979 374
272 3300002067 JGI24735J21928_10000036 JGI24735J21928_100000362 374
273 3300003316 rootH1_10109985 rootH1_101099853 374
274 3300006195 Ga0075366_10010964 Ga0075366_100109647 374
275 3300013102 Ga0157371_10062789 Ga0157371_100627892 374
276 3300013104 Ga0157370_10250458 Ga0157370_102504582 374
277 3300013306 Ga0163162_10003002 Ga0163162_100030025 374
278 3300013307 Ga0157372_10025953 Ga0157372_100259535 374
279 3300046471 Ga0495650_0000023 Ga0495650_0000023_104681_105805 374
280 3300046492 Ga0495585_0000065 Ga0495585_0000065_45734_46861 374
281 3300046507 Ga0495606_0000264 Ga0495606_0000264_31735_32859 374
282 3300046512 Ga0495610_0001102 Ga0495610_0001102_3857_4981 374
283 3300046513 Ga0495616_0000743 Ga0495616_0000743_13143_14267 374
284 3300046660 Ga0495625_0000211 Ga0495625_0000211_60412_61536 374
285 3300046665 Ga0495661_0029914 Ga0495661_0029914_1504_2628 374
286 3300046694 Ga0495649_0000090 Ga0495649_0000090_60680_61804 374
287 3300050493 nmdc:mga0k408_1631_c2 nmdc:mga0k408_1631_c2_1618_2742 374

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

27

380

0.85

PF01061

ABC2_membrane

ABC-2 type transporter

145

352

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8i3b-assembly1.cif.gz_B cryo-em structure of abscisic acid transporter atabcg25 in nanodisc 0.7439 177 371
7r8a-assembly1.cif.gz_A the structure of human abcg5/abcg8 purified from mammalian cells 0.732 177 372
7fdv-assembly1.cif.gz_D cryo-em structure of the human cholesterol transporter abcg1 in complex with cholesterol 0.7298 179 371
7r8d-assembly1.cif.gz_B the structure of human abcg1 e242q with cholesterol 0.7231 177 371
7r8c-assembly1.cif.gz_B the structure of human abcg1 0.7222 177 371
ID Description Score Start End Superfamily
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7508 51 148 3.40.1710.10
af_P0AFQ2_47_201_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7034 52 159 3.40.1710.10
3un6A01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.6319 50 105 3.40.190.10
af_O07424_53_206_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.623 51 170 3.40.1710.10
3gxaC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.6223 53 105 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A3D2JUV4-F1-model_v4 Transport permease protein 0.9383 169 373 GO:0043190
GO:0140359
AF-A0A353LQI3-F1-model_v4 Transport permease protein 0.9198 246 371 GO:0043190
GO:0140359
AF-A0A5E4KA59-F1-model_v4 ABC-2 type transporter 0.9174 262 371 GO:0043190
GO:0140359
AF-A0A3D2JUV4-F1-model_v4 Transport permease protein 0.9123 169 373 GO:0043190
GO:0140359
AF-A0A3C1T9A9-F1-model_v4 Transport permease protein 0.9065 264 370 GO:0005886
GO:0140359

Feature Viewer

pLDDT pTM Quality
71.21 0.62 Medium
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Predicted Structure (AlphaFold2)

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