F387667

General Info

Members Datasets Scaffolds Average Seq Length
286 154 286 585

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0082674|Ga0501033_0082674_245_2062
Length 605
Sequence MTSLVGTLSRLVGEAFAAEGLGESFGQVQVCDRPDLAQFQCNGALAAAKFLKGRPADGGPAGAAKANPRAIAEKIATRLKAQDLFAQVEIAGPGFINLSLTDAALDRHVAALAADPLLGAPQTGIDRTGTGKTVVIDFGGPNIAKPMHVGHLRSSIIGDCLQRLYRANGWHVVSDVHLGDWGLQMGQLISQIELDGIAPEYFDPNSVGPYPEQSPVSMDDLETLYPRASAACKADPGRLEAARRATVELQAGRPGYRALWRHFVAVSEVGLAREFGALGVKFDLWKGESSVDGVIPSMLEDLKARGLAETSEGALVVPVARDDDSKPLPPLILVKSEGGVLYGTTDLATVIERVREQNPHLILYVVDHRQHGHFEQVFRAAAKAGYQGRAELEHVGYGTMNGADGKPFKTRAGGVMKLHDLIGMATAEAAKRLAEAGIGADYSEAERAEIARKVGIAAIKFADLSHVRTTDYVFDLERFSTFEGKTGPYLQYAAVRIQSILRKAREQGHQPGTPVIRSPEERALVLQLLAIGDVMAMAEDRRAPNMLCEYAFALAQNFSRFYGAHHILSEPDAGLQAARLGLCALVLAVMTRVLDILGIEVPERM

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
88 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
152 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.15
Nodule 0
Rhizoplane 0
Rhizosphere 92.31
Stem 0
Stem Tuber 0
Unclassified 4.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000036 3300003214 Bacteria 286380
2 JGI25153J46596_10000638 3300003215 Bacteria 21413
3 rootH2_10034013 3300003320 Bacteria 5602
4 Ga0070658_10002507 3300005327 Bacteria 15338
5 Ga0070658_10028394 3300005327 Bacteria 4490
6 Ga0070658_10060299 3300005327 Bacteria 3090
7 Ga0070658_10118457 3300005327 Bacteria 2199
8 Ga0070666_10000705 3300005335 Bacteria 20271
9 Ga0070680_100002536 3300005336 Bacteria 13521
10 Ga0070661_100000741 3300005344 Bacteria 23706
11 Ga0070659_100028272 3300005366 Bacteria 4328
12 Ga0070667_100032542 3300005367 Bacteria 4350
13 Ga0070709_10000743 3300005434 Bacteria 18443
14 Ga0070713_100000004 3300005436 Bacteria 220768
15 Ga0070711_100018956 3300005439 Bacteria 4403
16 Ga0070678_100041135 3300005456 Bacteria 3275
17 Ga0070681_10000001 3300005458 Bacteria 946857
18 Ga0070681_10133310 3300005458 Bacteria 2416
19 Ga0068867_100001185 3300005459 Bacteria 17878
20 Ga0070679_100000032 3300005530 Bacteria 105384
21 Ga0070679_100009848 3300005530 Bacteria 9042
22 Ga0070679_100013625 3300005530 Bacteria 7790
23 Ga0070679_100015906 3300005530 Bacteria 7241
24 Ga0068853_100004020 3300005539 Bacteria 11310
25 Ga0070696_100117990 3300005546 Bacteria 1918
26 Ga0070665_100000381 3300005548 Bacteria 65638
27 Ga0070665_100011772 3300005548 Bacteria 8835
28 Ga0070665_100022694 3300005548 Bacteria 6318
29 Ga0070665_100060727 3300005548 Bacteria 3789
30 Ga0068855_100000022 3300005563 Bacteria 190807
31 Ga0068855_100014131 3300005563 Bacteria 9618
32 Ga0068857_100005550 3300005577 Bacteria 10763
33 Ga0068857_100016119 3300005577 Bacteria 6546
34 Ga0068856_100002215 3300005614 Bacteria 20112
35 Ga0068852_100011185 3300005616 Bacteria 6741
36 Ga0068866_10006901 3300005718 Bacteria 4743
37 Ga0068863_100028623 3300005841 Bacteria 5319
38 Ga0068858_100008493 3300005842 Bacteria 9869
39 Ga0070716_100002723 3300006173 Bacteria 8191
40 Ga0070712_100000187 3300006175 Bacteria 34324
41 Ga0070712_100002269 3300006175 Bacteria 11837
42 Ga0097621_100000201 3300006237 Bacteria 38886
43 Ga0097621_100034449 3300006237 Bacteria 4040
44 Ga0097621_100036565 3300006237 Bacteria 3929
45 Ga0097621_100122770 3300006237 Bacteria 2205
46 Ga0068871_100000805 3300006358 Bacteria 21096
47 Ga0068871_100015788 3300006358 Bacteria 5666
48 Ga0075428_100103801 3300006844 Bacteria 3100
49 Ga0075434_100085960 3300006871 Bacteria 3145
50 Ga0068865_100004736 3300006881 Bacteria 8219
51 Ga0068865_100081175 3300006881 Bacteria 2328
52 Ga0075436_100000914 3300006914 Bacteria 19668
53 Ga0105240_10000430 3300009093 Bacteria 77531
54 Ga0105240_10004317 3300009093 Bacteria 21704
55 Ga0105240_10153069 3300009093 Bacteria 2745
56 Ga0105240_10174861 3300009093 Bacteria 2539
57 Ga0105240_10233628 3300009093 Bacteria 2135
58 Ga0111539_10037491 3300009094 Bacteria 5853
59 Ga0105245_10068062 3300009098 Bacteria 3225
60 Ga0105241_10062406 3300009174 Bacteria 2873
61 Ga0105242_10014507 3300009176 Bacteria 6105
62 Ga0105242_10021999 3300009176 Bacteria 5011
63 Ga0105242_10145866 3300009176 Bacteria 2059
64 Ga0105248_10000005 3300009177 Bacteria 673111
65 Ga0105237_10006756 3300009545 Bacteria 12665
66 Ga0105237_10064144 3300009545 Bacteria 3670
67 Ga0105237_10090552 3300009545 Bacteria 3048
68 Ga0105238_10000704 3300009551 Bacteria 34914
69 Ga0105238_10023221 3300009551 Bacteria 6322
70 Ga0105238_10037180 3300009551 Bacteria 4950
71 Ga0105249_10036366 3300009553 Bacteria 4466
72 Ga0105239_10001437 3300010375 Bacteria 31749
73 Ga0105239_10007217 3300010375 Bacteria 12769
74 Ga0105239_10018456 3300010375 Bacteria 7704
75 Ga0105239_10027086 3300010375 Bacteria 6310
76 Ga0105239_10160276 3300010375 Bacteria 2513
77 Ga0157369_10006578 3300013105 Bacteria 13442
78 Ga0163162_10159879 3300013306 Bacteria 2374
79 Ga0157372_10006987 3300013307 Bacteria 12021
80 Ga0157372_10131102 3300013307 Bacteria 2884
81 Ga0157372_10139068 3300013307 Bacteria 2797
82 Ga0157375_10099131 3300013308 Bacteria 2992
83 Ga0163163_10000179 3300014325 Bacteria 65182
84 Ga0157379_10003257 3300014968 Bacteria 13757
85 Ga0157379_10003276 3300014968 Bacteria 13714
86 Ga0157379_10003407 3300014968 Bacteria 13447
87 Ga0157379_10106668 3300014968 Bacteria 2515
88 Ga0163161_10034015 3300017792 Bacteria 3645
89 Ga0213874_10001230 3300021377 Bacteria 5271
90 Ga0213876_10000785 3300021384 Bacteria 21620
91 Ga0213876_10002480 3300021384 Bacteria 10828
92 Ga0224572_1000386 3300024225 Bacteria 4953
93 Ga0209233_1000015 3300025261 Bacteria 980563
94 Ga0209758_1000013 3300025297 Bacteria 873003
95 Ga0207692_10039245 3300025898 Unclassified 2328
96 Ga0207680_10002210 3300025903 Bacteria 9087
97 Ga0207680_10024934 3300025903 Bacteria 3291
98 Ga0207699_10000167 3300025906 Bacteria 40294
99 Ga0207705_10000474 3300025909 Bacteria 34416
100 Ga0207705_10117173 3300025909 Bacteria 1973
101 Ga0207654_10036169 3300025911 Bacteria 2757
102 Ga0207707_10000001 3300025912 Bacteria 1212482
103 Ga0207707_10078879 3300025912 Bacteria 2876
104 Ga0207695_10000018 3300025913 Bacteria 766611
105 Ga0207695_10163836 3300025913 Bacteria 2153
106 Ga0207671_10006474 3300025914 Bacteria 10426
107 Ga0207693_10000488 3300025915 Bacteria 35928
108 Ga0207693_10000533 3300025915 Bacteria 34437
109 Ga0207693_10116451 3300025915 Bacteria 2098
110 Ga0207663_10062105 3300025916 Bacteria 2373
111 Ga0207660_10000280 3300025917 Bacteria 33705
112 Ga0207660_10002089 3300025917 Bacteria 13240
113 Ga0207649_10000080 3300025920 Bacteria 82307
114 Ga0207649_10067586 3300025920 Bacteria 2269
115 Ga0207652_10000722 3300025921 Bacteria 32051
116 Ga0207652_10019119 3300025921 Bacteria 5628
117 Ga0207652_10037004 3300025921 Bacteria 4129
118 Ga0207694_10000018 3300025924 Bacteria 331281
119 Ga0207694_10042958 3300025924 Bacteria 3488
120 Ga0207687_10042696 3300025927 Bacteria 3121
121 Ga0207700_10000011 3300025928 Bacteria 266323
122 Ga0207700_10114222 3300025928 Bacteria 2178
123 Ga0207709_10006920 3300025935 Bacteria 6343
124 Ga0207711_10000002 3300025941 Bacteria 1228676
125 Ga0207711_10050569 3300025941 Bacteria 3558
126 Ga0207689_10042401 3300025942 Bacteria 3764
127 Ga0207667_10000061 3300025949 Bacteria 190818
128 Ga0207667_10008750 3300025949 Bacteria 12000
129 Ga0207667_10115428 3300025949 Bacteria 2767
130 Ga0207658_10020936 3300025986 Bacteria 4533
131 Ga0207658_10066692 3300025986 Bacteria 2708
132 Ga0207703_10006047 3300026035 Bacteria 9680
133 Ga0207703_10061710 3300026035 Bacteria 3069
134 Ga0207702_10000164 3300026078 Bacteria 79231
135 Ga0207702_10030732 3300026078 Bacteria 4474
136 Ga0207641_10057700 3300026088 Bacteria 3302
137 Ga0207648_10003688 3300026089 Bacteria 16027
138 Ga0207674_10000261 3300026116 Bacteria 66008
139 Ga0207674_10056712 3300026116 Bacteria 3975
140 Ga0207683_10009569 3300026121 Bacteria 8263
141 Ga0207683_10043165 3300026121 Bacteria 3940
142 Ga0207698_10022161 3300026142 Bacteria 4408
143 Ga0268266_10000900 3300028379 Bacteria 38445
144 Ga0268266_10015408 3300028379 Bacteria 6560
145 Ga0268266_10018728 3300028379 Bacteria 5899
146 Ga0268266_10105932 3300028379 Bacteria 2485
147 Ga0268266_10148312 3300028379 Bacteria 2111
148 Ga0268264_10031670 3300028381 Bacteria 4336
149 Ga0265337_1005496 3300028556 Bacteria 5028
150 Ga0265334_10001038 3300028573 Bacteria 13721
151 Ga0265318_10000104 3300028577 Bacteria 78958
152 Ga0265338_10000005 3300028800 Bacteria 571137
153 Ga0265338_10006345 3300028800 Bacteria 15107
154 Ga0265338_10010999 3300028800 Bacteria 10510
155 Ga0265760_10003797 3300031090 Bacteria 4376
156 Ga0265320_10001113 3300031240 Bacteria 19838
157 Ga0265325_10000005 3300031241 Bacteria 321343
158 Ga0265325_10000642 3300031241 Bacteria 25412
159 Ga0265325_10000830 3300031241 Bacteria 22349
160 Ga0265325_10004787 3300031241 Bacteria 8480
161 Ga0265325_10015211 3300031241 Bacteria 4331
162 Ga0265340_10000818 3300031247 Bacteria 17699
163 Ga0265340_10017530 3300031247 Bacteria 3705
164 Ga0265339_10002646 3300031249 Bacteria 12770
165 Ga0265339_10015355 3300031249 Bacteria 4591
166 Ga0265339_10015788 3300031249 Bacteria 4517
167 Ga0265339_10019830 3300031249 Bacteria 3938
168 Ga0265339_10021598 3300031249 Bacteria 3742
169 Ga0265331_10000003 3300031250 Bacteria 499358
170 Ga0265331_10005082 3300031250 Bacteria 8033
171 Ga0265331_10006658 3300031250 Bacteria 6789
172 Ga0265327_10000187 3300031251 Bacteria 131135
173 Ga0265316_10002835 3300031344 Bacteria 17736
174 Ga0265316_10013102 3300031344 Bacteria 7392
175 Ga0265316_10061272 3300031344 Bacteria 2923
176 Ga0265313_10000626 3300031595 Bacteria 36567
177 Ga0265313_10002994 3300031595 Bacteria 14065
178 Ga0265313_10002995 3300031595 Bacteria 14061
179 Ga0265313_10007224 3300031595 Bacteria 7641
180 Ga0265313_10009978 3300031595 Bacteria 6087
181 Ga0265313_10013915 3300031595 Bacteria 4791
182 Ga0265314_10000125 3300031711 Bacteria 118671
183 Ga0265314_10022579 3300031711 Bacteria 4819
184 Ga0265314_10026248 3300031711 Bacteria 4379
185 Ga0265314_10027927 3300031711 Bacteria 4216
186 Ga0265342_10001617 3300031712 Bacteria 20801
187 Ga0265342_10039676 3300031712 Bacteria 2859
188 Ga0265342_10066192 3300031712 Bacteria 2117
189 Ga0307516_10039905 3300031730 Bacteria 4676
190 Ga0373943_0004977 3300035170 Bacteria 5997
191 Ga0373935_0029652 3300035692 Bacteria 3386
192 Ga0373927_0041271 3300035695 Bacteria 2993
193 Ga0373933_0002679 3300035724 Bacteria 9969
194 Ga0373947_0007618 3300035725 Bacteria 6266
195 Ga0373937_0025389 3300036401 Bacteria 5349
196 Ga0373937_0062931 3300036401 Bacteria 3412
197 Ga0373925_0003950 3300037068 Bacteria 11310
198 Ga0395900_0036616 3300037418 Bacteria 5059
199 Ga0395898_0006786 3300037466 Bacteria 12186
200 Ga0395901_0023404 3300038443 Bacteria 6332
201 Ga0400483_082816 3300039062 Bacteria 3467
202 Ga0436365_0066450 3300039437 Bacteria 14032
203 Ga0436365_0591664 3300039437 Bacteria 9806
204 Ga0436365_0687864 3300039437 Bacteria 8538
205 Ga0436365_1317879 3300039437 Bacteria 37660
206 Ga0436363_0612045 3300039450 Bacteria 11006
207 Ga0495629_0061915 3300046459 Bacteria 2615
208 Ga0495580_0011236 3300046472 Bacteria 6928
209 Ga0495580_0095880 3300046472 Bacteria 2063
210 Ga0495609_0013442 3300046538 Bacteria 3864
211 Ga0495645_0057223 3300046543 Bacteria 2830
212 Ga0495658_0000632 3300046683 Bacteria 19106
213 Ga0495675_0025884 3300047444 Bacteria 3739
214 Ga0496121_0010270 3300048924 Bacteria 10593
215 Ga0496126_0001865 3300048929 Bacteria 30699
216 Ga0495682_0002695 3300049460 Bacteria 8252
217 Ga0501031_0024650 3300049568 Bacteria 3922
218 Ga0501033_0006232 3300049570 Bacteria 9348
219 Ga0501033_0035473 3300049570 Bacteria 3739
220 Ga0501033_0082674 3300049570 Bacteria 2354
221 Ga0501034_0006522 3300049571 Bacteria 12545
222 Ga0501034_0024179 3300049571 Bacteria 6180
223 Ga0501034_0030131 3300049571 Bacteria 5515
224 Ga0501034_0055580 3300049571 Bacteria 3983
225 Ga0501034_0125978 3300049571 Bacteria 2547
226 Ga0501036_0041130 3300049572 Bacteria 3912
227 Ga0501037_0035390 3300049573 Bacteria 3683
228 Ga0501037_0064952 3300049573 Bacteria 2659
229 Ga0501037_0074158 3300049573 Bacteria 2473
230 Ga0501038_0000014 3300049574 Bacteria 164836
231 Ga0501038_0019089 3300049574 Bacteria 6182
232 Ga0501039_0004461 3300049575 Bacteria 10563
233 Ga0501043_0013627 3300049579 Bacteria 6361
234 Ga0501047_0003368 3300049581 Bacteria 15134
235 Ga0501047_0032993 3300049581 Bacteria 4999
236 Ga0501047_0035101 3300049581 Bacteria 4843
237 Ga0501047_0129416 3300049581 Bacteria 2405
238 Ga0501047_0147015 3300049581 Bacteria 2233
239 Ga0501067_0002305 3300049583 Bacteria 10550
240 Ga0501067_0007327 3300049583 Bacteria 6128
241 Ga0501069_0009909 3300049585 Bacteria 5038
242 Ga0501070_0000002 3300049586 Bacteria 347524
243 Ga0501070_0003697 3300049586 Bacteria 13227
244 Ga0501070_0013137 3300049586 Bacteria 6979
245 Ga0501070_0108964 3300049586 Bacteria 2288
246 Ga0501072_0001937 3300049588 Bacteria 15425
247 Ga0501072_0033409 3300049588 Bacteria 4031
248 Ga0501073_0005587 3300049589 Bacteria 9406
249 Ga0501073_0036692 3300049589 Bacteria 3481
250 Ga0501074_0004923 3300049590 Bacteria 9572
251 Ga0501074_0033523 3300049590 Bacteria 3721
252 Ga0501079_0002115 3300049741 Bacteria 14276
253 Ga0501080_0017035 3300049742 Bacteria 6710
254 Ga0501080_0022590 3300049742 Bacteria 5827
255 Ga0501080_0029768 3300049742 Bacteria 5082
256 Ga0501080_0075923 3300049742 Bacteria 3125
257 Ga0501083_0000872 3300049744 Bacteria 19937
258 Ga0501083_0048982 3300049744 Bacteria 2850
259 Ga0501083_0052923 3300049744 Bacteria 2726
260 Ga0501035_0003217 3300049822 Bacteria 15651
261 Ga0501035_0003918 3300049822 Bacteria 14193
262 Ga0501035_0020162 3300049822 Bacteria 6123
263 Ga0501035_0029139 3300049822 Bacteria 5034
264 Ga0501035_0034079 3300049822 Bacteria 4628
265 Ga0501035_0150022 3300049822 Bacteria 2024
266 Ga0501044_0003971 3300049823 Bacteria 16566
267 Ga0501044_0005181 3300049823 Bacteria 14511
268 Ga0501044_0007426 3300049823 Bacteria 12057
269 Ga0501044_0011957 3300049823 Bacteria 9406
270 Ga0501044_0020413 3300049823 Bacteria 7074
271 Ga0501044_0061858 3300049823 Bacteria 3829
272 Ga0501044_0082813 3300049823 Bacteria 3245
273 nmdc:mga08y16_37648_c1 3300050511 Bacteria 5078
274 nmdc:mga0n895_81298_c1 3300050512 Bacteria 3229
275 nmdc:mga08x19_556_c1 3300050514 Bacteria 24455
276 Ga0500643_000003 3300053087 Bacteria 876659
277 Ga0500595_013434 3300053119 Bacteria 3136
278 Ga0500559_0010589 3300053136 Bacteria 3955
279 Ga0500573_0000068 3300053140 Bacteria 61479
280 Ga0500639_005726 3300053163 Bacteria 6383
281 Ga0501084_0001103 3300054114 Bacteria 21009
282 Ga0501084_0010528 3300054114 Bacteria 7646
283 Ga0501084_0024257 3300054114 Bacteria 5057
284 Ga0501084_0123499 3300054114 Bacteria 2178
285 Ga0501082_0027910 3300060353 Bacteria 4861
286 Ga0501082_0140489 3300060353 Bacteria 2096

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0024179 Ga0501034_0024179_4634_6169 505
2 3300009093 Ga0105240_10174861 Ga0105240_101748611 551
3 3300009551 Ga0105238_10037180 Ga0105238_100371802 551
4 3300006237 Ga0097621_100036565 Ga0097621_1000365652 559
5 3300013307 Ga0157372_10006987 Ga0157372_100069875 559
6 3300053163 Ga0500639_005726 Ga0500639_005726_1074_2831 560
7 3300031595 Ga0265313_10000626 Ga0265313_1000062623 563
8 3300005327 Ga0070658_10028394 Ga0070658_100283942 564
9 3300005548 Ga0070665_100060727 Ga0070665_1000607273 564
10 3300009093 Ga0105240_10233628 Ga0105240_102336282 564
11 3300009174 Ga0105241_10062406 Ga0105241_100624062 564
12 3300025909 Ga0207705_10117173 Ga0207705_101171731 564
13 3300025913 Ga0207695_10163836 Ga0207695_101638362 564
14 3300025942 Ga0207689_10042401 Ga0207689_100424013 564
15 3300026035 Ga0207703_10061710 Ga0207703_100617103 564
16 3300028379 Ga0268266_10015408 Ga0268266_100154083 564
17 3300037466 Ga0395898_0006786 Ga0395898_0006786_10031_11776 564
18 3300038443 Ga0395901_0023404 Ga0395901_0023404_4549_6294 564
19 3300046538 Ga0495609_0013442 Ga0495609_0013442_1744_3504 564
20 3300006237 Ga0097621_100034449 Ga0097621_1000344492 566
21 3300005459 Ga0068867_100001185 Ga0068867_1000011854 567
22 3300006881 Ga0068865_100081175 Ga0068865_1000811752 567
23 3300009176 Ga0105242_10014507 Ga0105242_100145073 567
24 3300013308 Ga0157375_10099131 Ga0157375_100991311 567
25 3300025927 Ga0207687_10042696 Ga0207687_100426962 567
26 3300025935 Ga0207709_10006920 Ga0207709_100069206 567
27 3300026089 Ga0207648_10003688 Ga0207648_100036883 567
28 3300009098 Ga0105245_10068062 Ga0105245_100680623 568
29 3300009545 Ga0105237_10064144 Ga0105237_100641441 568
30 3300048924 Ga0496121_0010270 Ga0496121_0010270_4318_6123 568
31 3300037068 Ga0373925_0003950 Ga0373925_0003950_3999_5762 569
32 3300005530 Ga0070679_100015906 Ga0070679_1000159065 570
33 3300025921 Ga0207652_10019119 Ga0207652_100191194 570
34 3300005327 Ga0070658_10060299 Ga0070658_100602991 571
35 3300005548 Ga0070665_100011772 Ga0070665_1000117723 571
36 3300005842 Ga0068858_100008493 Ga0068858_1000084935 571
37 3300014968 Ga0157379_10003257 Ga0157379_100032572 571
38 3300014968 Ga0157379_10106668 Ga0157379_101066681 571
39 3300026035 Ga0207703_10006047 Ga0207703_100060478 571
40 3300028379 Ga0268266_10148312 Ga0268266_101483122 571
41 3300049568 Ga0501031_0024650 Ga0501031_0024650_823_2580 571
42 3300049571 Ga0501034_0125978 Ga0501034_0125978_314_2071 571
43 3300053140 Ga0500573_0000068 Ga0500573_0000068_13234_14994 571
44 3300035170 Ga0373943_0004977 Ga0373943_0004977_3072_4835 572
45 3300035692 Ga0373935_0029652 Ga0373935_0029652_1424_3187 572
46 3300035695 Ga0373927_0041271 Ga0373927_0041271_1007_2770 572
47 3300035725 Ga0373947_0007618 Ga0373947_0007618_712_2475 572
48 3300049571 Ga0501034_0030131 Ga0501034_0030131_983_2743 572
49 3300046683 Ga0495658_0000632 Ga0495658_0000632_15287_17050 573
50 3300009176 Ga0105242_10021999 Ga0105242_100219992 575
51 3300028577 Ga0265318_10000104 Ga0265318_100001045 575
52 3300049571 Ga0501034_0055580 Ga0501034_0055580_1936_3681 575
53 3300049572 Ga0501036_0041130 Ga0501036_0041130_1036_2781 575
54 3300049573 Ga0501037_0035390 Ga0501037_0035390_1202_2947 575
55 3300049581 Ga0501047_0003368 Ga0501047_0003368_7067_8812 575
56 3300049585 Ga0501069_0009909 Ga0501069_0009909_2727_4472 575
57 3300049586 Ga0501070_0003697 Ga0501070_0003697_8805_10550 575
58 3300049589 Ga0501073_0005587 Ga0501073_0005587_6313_8058 575
59 3300049590 Ga0501074_0033523 Ga0501074_0033523_899_2644 575
60 3300049741 Ga0501079_0002115 Ga0501079_0002115_2391_4136 575
61 3300049742 Ga0501080_0075923 Ga0501080_0075923_1078_2823 575
62 3300049744 Ga0501083_0052923 Ga0501083_0052923_81_1826 575
63 3300049822 Ga0501035_0003918 Ga0501035_0003918_6587_8332 575
64 3300049823 Ga0501044_0011957 Ga0501044_0011957_1349_3094 575
65 3300054114 Ga0501084_0010528 Ga0501084_0010528_56_1801 575
66 3300005458 Ga0070681_10133310 Ga0070681_101333101 576
67 3300005548 Ga0070665_100022694 Ga0070665_1000226946 576
68 3300005563 Ga0068855_100014131 Ga0068855_1000141311 576
69 3300005577 Ga0068857_100016119 Ga0068857_1000161193 576
70 3300009093 Ga0105240_10153069 Ga0105240_101530692 576
71 3300009545 Ga0105237_10090552 Ga0105237_100905522 576
72 3300009551 Ga0105238_10023221 Ga0105238_100232212 576
73 3300025912 Ga0207707_10078879 Ga0207707_100788792 576
74 3300025915 Ga0207693_10116451 Ga0207693_101164511 576
75 3300025924 Ga0207694_10042958 Ga0207694_100429581 576
76 3300026116 Ga0207674_10056712 Ga0207674_100567124 576
77 3300049570 Ga0501033_0006232 Ga0501033_0006232_55_1800 576
78 3300049581 Ga0501047_0032993 Ga0501047_0032993_1017_2762 576
79 3300049822 Ga0501035_0020162 Ga0501035_0020162_2587_4332 576
80 3300049823 Ga0501044_0020413 Ga0501044_0020413_2710_4455 576
81 3300021377 Ga0213874_10001230 Ga0213874_100012301 577
82 3300039450 Ga0436363_0612045 Ga0436363_0612045_254_2002 577
83 3300049583 Ga0501067_0002305 Ga0501067_0002305_1055_2800 577
84 3300049588 Ga0501072_0001937 Ga0501072_0001937_10806_12551 577
85 3300054114 Ga0501084_0123499 Ga0501084_0123499_159_1904 577
86 3300039062 Ga0400483_082816 Ga0400483_082816_720_2486 578
87 3300003215 JGI25153J46596_10000638 JGI25153J46596_1000063810 579
88 3300005327 Ga0070658_10002507 Ga0070658_1000250715 579
89 3300005530 Ga0070679_100009848 Ga0070679_1000098488 579
90 3300005548 Ga0070665_100000381 Ga0070665_10000038154 579
91 3300014968 Ga0157379_10003276 Ga0157379_100032767 579
92 3300025297 Ga0209758_1000013 Ga0209758_1000013269 579
93 3300025920 Ga0207649_10067586 Ga0207649_100675862 579
94 3300026121 Ga0207683_10043165 Ga0207683_100431653 579
95 3300028379 Ga0268266_10000900 Ga0268266_1000090018 579
96 3300031711 Ga0265314_10026248 Ga0265314_100262484 579
97 3300031730 Ga0307516_10039905 Ga0307516_100399056 579
98 3300037418 Ga0395900_0036616 Ga0395900_0036616_1112_2905 579
99 3300049570 Ga0501033_0035473 Ga0501033_0035473_555_2312 579
100 3300049573 Ga0501037_0074158 Ga0501037_0074158_204_1961 579
101 3300049823 Ga0501044_0007426 Ga0501044_0007426_3891_5648 579
102 3300053119 Ga0500595_013434 Ga0500595_013434_124_1878 579
103 3300021384 Ga0213876_10000785 Ga0213876_1000078510 580
104 3300021384 Ga0213876_10002480 Ga0213876_100024804 580
105 3300024225 Ga0224572_1000386 Ga0224572_10003865 580
106 3300031090 Ga0265760_10003797 Ga0265760_100037974 580
107 3300031595 Ga0265313_10002995 Ga0265313_100029953 580
108 3300031711 Ga0265314_10022579 Ga0265314_100225794 580
109 3300031712 Ga0265342_10066192 Ga0265342_100661921 580
110 3300039437 Ga0436365_0066450 Ga0436365_0066450_8561_10318 580
111 3300039437 Ga0436365_0591664 Ga0436365_0591664_3430_5190 580
112 3300039437 Ga0436365_1317879 Ga0436365_1317879_27902_29665 580
113 3300046459 Ga0495629_0061915 Ga0495629_0061915_732_2495 580
114 3300046472 Ga0495580_0011236 Ga0495580_0011236_470_2233 580
115 3300049574 Ga0501038_0000014 Ga0501038_0000014_34470_36233 580
116 3300049581 Ga0501047_0035101 Ga0501047_0035101_155_1951 580
117 3300049581 Ga0501047_0147015 Ga0501047_0147015_29_1786 580
118 3300049742 Ga0501080_0017035 Ga0501080_0017035_2413_4209 580
119 3300049822 Ga0501035_0003217 Ga0501035_0003217_850_2613 580
120 3300049822 Ga0501035_0034079 Ga0501035_0034079_2262_4034 580
121 3300049823 Ga0501044_0003971 Ga0501044_0003971_7991_9754 580
122 3300003214 JGI25165J46597_1000036 JGI25165J46597_100003676 581
123 3300003320 rootH2_10034013 rootH2_100340133 581
124 3300005327 Ga0070658_10118457 Ga0070658_101184571 581
125 3300005335 Ga0070666_10000705 Ga0070666_100007054 581
126 3300005336 Ga0070680_100002536 Ga0070680_1000025363 581
127 3300005344 Ga0070661_100000741 Ga0070661_10000074114 581
128 3300005366 Ga0070659_100028272 Ga0070659_1000282722 581
129 3300005367 Ga0070667_100032542 Ga0070667_1000325423 581
130 3300005434 Ga0070709_10000743 Ga0070709_100007435 581
131 3300005436 Ga0070713_100000004 Ga0070713_100000004132 581
132 3300005439 Ga0070711_100018956 Ga0070711_1000189562 581
133 3300005456 Ga0070678_100041135 Ga0070678_1000411353 581
134 3300005458 Ga0070681_10000001 Ga0070681_10000001448 581
135 3300005530 Ga0070679_100000032 Ga0070679_10000003260 581
136 3300005530 Ga0070679_100013625 Ga0070679_1000136253 581
137 3300005539 Ga0068853_100004020 Ga0068853_1000040203 581
138 3300005546 Ga0070696_100117990 Ga0070696_1001179901 581
139 3300005563 Ga0068855_100000022 Ga0068855_10000002240 581
140 3300005577 Ga0068857_100005550 Ga0068857_1000055503 581
141 3300005614 Ga0068856_100002215 Ga0068856_10000221515 581
142 3300005616 Ga0068852_100011185 Ga0068852_1000111852 581
143 3300005718 Ga0068866_10006901 Ga0068866_100069013 581
144 3300005841 Ga0068863_100028623 Ga0068863_1000286237 581
145 3300006173 Ga0070716_100002723 Ga0070716_1000027233 581
146 3300006175 Ga0070712_100000187 Ga0070712_10000018713 581
147 3300006175 Ga0070712_100002269 Ga0070712_10000226910 581
148 3300006237 Ga0097621_100000201 Ga0097621_10000020125 581
149 3300006237 Ga0097621_100122770 Ga0097621_1001227701 581
150 3300006358 Ga0068871_100000805 Ga0068871_1000008057 581
151 3300006358 Ga0068871_100015788 Ga0068871_1000157884 581
152 3300006844 Ga0075428_100103801 Ga0075428_1001038013 581
153 3300006871 Ga0075434_100085960 Ga0075434_1000859602 581
154 3300006881 Ga0068865_100004736 Ga0068865_1000047366 581
155 3300006914 Ga0075436_100000914 Ga0075436_10000091416 581
156 3300009093 Ga0105240_10000430 Ga0105240_1000043047 581
157 3300009093 Ga0105240_10004317 Ga0105240_1000431716 581
158 3300009094 Ga0111539_10037491 Ga0111539_100374912 581
159 3300009176 Ga0105242_10145866 Ga0105242_101458661 581
160 3300009177 Ga0105248_10000005 Ga0105248_10000005581 581
161 3300009545 Ga0105237_10006756 Ga0105237_100067563 581
162 3300009551 Ga0105238_10000704 Ga0105238_1000070431 581
163 3300009553 Ga0105249_10036366 Ga0105249_100363662 581
164 3300010375 Ga0105239_10001437 Ga0105239_1000143733 581
165 3300010375 Ga0105239_10007217 Ga0105239_100072172 581
166 3300010375 Ga0105239_10018456 Ga0105239_100184569 581
167 3300010375 Ga0105239_10027086 Ga0105239_100270862 581
168 3300010375 Ga0105239_10160276 Ga0105239_101602761 581
169 3300013105 Ga0157369_10006578 Ga0157369_1000657811 581
170 3300013306 Ga0163162_10159879 Ga0163162_101598791 581
171 3300013307 Ga0157372_10131102 Ga0157372_101311022 581
172 3300013307 Ga0157372_10139068 Ga0157372_101390683 581
173 3300014325 Ga0163163_10000179 Ga0163163_1000017918 581
174 3300014968 Ga0157379_10003407 Ga0157379_100034079 581
175 3300017792 Ga0163161_10034015 Ga0163161_100340152 581
176 3300025261 Ga0209233_1000015 Ga0209233_1000015854 581
177 3300025898 Ga0207692_10039245 Ga0207692_100392452 581
178 3300025903 Ga0207680_10002210 Ga0207680_100022108 581
179 3300025903 Ga0207680_10024934 Ga0207680_100249342 581
180 3300025906 Ga0207699_10000167 Ga0207699_1000016725 581
181 3300025909 Ga0207705_10000474 Ga0207705_1000047427 581
182 3300025911 Ga0207654_10036169 Ga0207654_100361692 581
183 3300025912 Ga0207707_10000001 Ga0207707_10000001133 581
184 3300025913 Ga0207695_10000018 Ga0207695_10000018540 581
185 3300025914 Ga0207671_10006474 Ga0207671_100064747 581
186 3300025915 Ga0207693_10000488 Ga0207693_100004884 581
187 3300025915 Ga0207693_10000533 Ga0207693_1000053313 581
188 3300025916 Ga0207663_10062105 Ga0207663_100621051 581
189 3300025917 Ga0207660_10000280 Ga0207660_1000028027 581
190 3300025917 Ga0207660_10002089 Ga0207660_100020892 581
191 3300025920 Ga0207649_10000080 Ga0207649_1000008030 581
192 3300025921 Ga0207652_10000722 Ga0207652_1000072220 581
193 3300025921 Ga0207652_10037004 Ga0207652_100370043 581
194 3300025924 Ga0207694_10000018 Ga0207694_100000185 581
195 3300025928 Ga0207700_10000011 Ga0207700_10000011174 581
196 3300025928 Ga0207700_10114222 Ga0207700_101142222 581
197 3300025941 Ga0207711_10000002 Ga0207711_10000002579 581
198 3300025941 Ga0207711_10050569 Ga0207711_100505693 581
199 3300025949 Ga0207667_10000061 Ga0207667_1000006140 581
200 3300025949 Ga0207667_10008750 Ga0207667_100087509 581
201 3300025949 Ga0207667_10115428 Ga0207667_101154282 581
202 3300025986 Ga0207658_10020936 Ga0207658_100209363 581
203 3300025986 Ga0207658_10066692 Ga0207658_100666922 581
204 3300026078 Ga0207702_10000164 Ga0207702_1000016416 581
205 3300026078 Ga0207702_10030732 Ga0207702_100307323 581
206 3300026088 Ga0207641_10057700 Ga0207641_100577002 581
207 3300026116 Ga0207674_10000261 Ga0207674_100002619 581
208 3300026121 Ga0207683_10009569 Ga0207683_100095694 581
209 3300026142 Ga0207698_10022161 Ga0207698_100221611 581
210 3300028379 Ga0268266_10018728 Ga0268266_100187285 581
211 3300028379 Ga0268266_10105932 Ga0268266_101059321 581
212 3300028381 Ga0268264_10031670 Ga0268264_100316703 581
213 3300028556 Ga0265337_1005496 Ga0265337_10054964 581
214 3300028573 Ga0265334_10001038 Ga0265334_100010386 581
215 3300028800 Ga0265338_10000005 Ga0265338_10000005321 581
216 3300028800 Ga0265338_10006345 Ga0265338_100063454 581
217 3300028800 Ga0265338_10010999 Ga0265338_100109994 581
218 3300031240 Ga0265320_10001113 Ga0265320_1000111316 581
219 3300031241 Ga0265325_10000005 Ga0265325_10000005196 581
220 3300031241 Ga0265325_10000642 Ga0265325_1000064218 581
221 3300031241 Ga0265325_10000830 Ga0265325_100008309 581
222 3300031241 Ga0265325_10004787 Ga0265325_100047873 581
223 3300031241 Ga0265325_10015211 Ga0265325_100152113 581
224 3300031247 Ga0265340_10000818 Ga0265340_100008185 581
225 3300031247 Ga0265340_10017530 Ga0265340_100175303 581
226 3300031249 Ga0265339_10002646 Ga0265339_100026469 581
227 3300031249 Ga0265339_10015355 Ga0265339_100153552 581
228 3300031249 Ga0265339_10015788 Ga0265339_100157887 581
229 3300031249 Ga0265339_10019830 Ga0265339_100198304 581
230 3300031249 Ga0265339_10021598 Ga0265339_100215983 581
231 3300031250 Ga0265331_10000003 Ga0265331_10000003191 581
232 3300031250 Ga0265331_10005082 Ga0265331_100050825 581
233 3300031250 Ga0265331_10006658 Ga0265331_100066583 581
234 3300031251 Ga0265327_10000187 Ga0265327_100001874 581
235 3300031344 Ga0265316_10002835 Ga0265316_100028357 581
236 3300031344 Ga0265316_10013102 Ga0265316_100131024 581
237 3300031344 Ga0265316_10061272 Ga0265316_100612722 581
238 3300031595 Ga0265313_10002994 Ga0265313_100029949 581
239 3300031595 Ga0265313_10007224 Ga0265313_100072243 581
240 3300031595 Ga0265313_10009978 Ga0265313_100099782 581
241 3300031595 Ga0265313_10013915 Ga0265313_100139151 581
242 3300031711 Ga0265314_10000125 Ga0265314_10000125102 581
243 3300031711 Ga0265314_10027927 Ga0265314_100279271 581
244 3300031712 Ga0265342_10001617 Ga0265342_1000161710 581
245 3300031712 Ga0265342_10039676 Ga0265342_100396763 581
246 3300035724 Ga0373933_0002679 Ga0373933_0002679_2356_4119 581
247 3300036401 Ga0373937_0025389 Ga0373937_0025389_3513_5276 581
248 3300036401 Ga0373937_0062931 Ga0373937_0062931_885_2648 581
249 3300039437 Ga0436365_0687864 Ga0436365_0687864_4709_6472 581
250 3300046472 Ga0495580_0095880 Ga0495580_0095880_53_1816 581
251 3300046543 Ga0495645_0057223 Ga0495645_0057223_337_2100 581
252 3300047444 Ga0495675_0025884 Ga0495675_0025884_1319_3082 581
253 3300048929 Ga0496126_0001865 Ga0496126_0001865_9744_11510 581
254 3300049460 Ga0495682_0002695 Ga0495682_0002695_700_2463 581
255 3300049570 Ga0501033_0082674 Ga0501033_0082674_245_2062 581
256 3300049571 Ga0501034_0006522 Ga0501034_0006522_10715_12532 581
257 3300049573 Ga0501037_0064952 Ga0501037_0064952_838_2640 581
258 3300049574 Ga0501038_0019089 Ga0501038_0019089_4093_5910 581
259 3300049575 Ga0501039_0004461 Ga0501039_0004461_8733_10550 581
260 3300049579 Ga0501043_0013627 Ga0501043_0013627_1088_2905 581
261 3300049581 Ga0501047_0129416 Ga0501047_0129416_412_2178 581
262 3300049583 Ga0501067_0007327 Ga0501067_0007327_3501_5318 581
263 3300049586 Ga0501070_0000002 Ga0501070_0000002_302440_304206 581
264 3300049586 Ga0501070_0013137 Ga0501070_0013137_3351_5168 581
265 3300049586 Ga0501070_0108964 Ga0501070_0108964_386_2149 581
266 3300049588 Ga0501072_0033409 Ga0501072_0033409_199_2016 581
267 3300049589 Ga0501073_0036692 Ga0501073_0036692_391_2208 581
268 3300049590 Ga0501074_0004923 Ga0501074_0004923_3975_5792 581
269 3300049742 Ga0501080_0022590 Ga0501080_0022590_3677_5440 581
270 3300049742 Ga0501080_0029768 Ga0501080_0029768_2781_4547 581
271 3300049744 Ga0501083_0000872 Ga0501083_0000872_1088_2905 581
272 3300049744 Ga0501083_0048982 Ga0501083_0048982_453_2249 581
273 3300049822 Ga0501035_0029139 Ga0501035_0029139_550_2316 581
274 3300049822 Ga0501035_0150022 Ga0501035_0150022_87_1850 581
275 3300049823 Ga0501044_0005181 Ga0501044_0005181_500_2266 581
276 3300049823 Ga0501044_0061858 Ga0501044_0061858_1993_3756 581
277 3300049823 Ga0501044_0082813 Ga0501044_0082813_131_1894 581
278 3300050511 nmdc:mga08y16_37648_c1 nmdc:mga08y16_37648_c1_2615_4378 581
279 3300050512 nmdc:mga0n895_81298_c1 nmdc:mga0n895_81298_c1_405_2168 581
280 3300050514 nmdc:mga08x19_556_c1 nmdc:mga08x19_556_c1_17677_19440 581
281 3300053087 Ga0500643_000003 Ga0500643_000003_611656_613440 581
282 3300053136 Ga0500559_0010589 Ga0500559_0010589_112_1866 581
283 3300054114 Ga0501084_0001103 Ga0501084_0001103_8819_10582 581
284 3300054114 Ga0501084_0024257 Ga0501084_0024257_2429_4246 581
285 3300060353 Ga0501082_0027910 Ga0501082_0027910_644_2440 581
286 3300060353 Ga0501082_0140489 Ga0501082_0140489_49_1812 581

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05746

DALR_1

DALR anticodon binding domain

490

605

0.96

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

116

476

0.91

PF03485

Arg_tRNA_synt_N

Arginyl tRNA synthetase N terminal domain

6

100

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9111 1 581
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9065 1 581
5b63-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate trna(arg) 0.9039 2 581
5b63-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate trna(arg) 0.9024 2 581
5yym-assembly2.cif.gz_B crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.9003 1 581
ID Description Score Start End Superfamily
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9486 467 581 1.10.730.10
2zufA03 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9262 471 581 1.10.730.10
af_Q3U186_457_578_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.921 460 581 1.10.730.10
af_Q3U186_457_578_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9138 460 581 1.10.730.10
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9117 467 581 1.10.730.10
ID Description Score Start End GO Terms
AF-A0A848Z800-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9807 462 581 GO:0004814
GO:0005524
GO:0006420
AF-A0A7V0LPL3-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9718 315 581 GO:0004814
GO:0005524
GO:0006420
AF-A0A7X7H6Z6-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9689 429 581 GO:0004814
GO:0005524
GO:0006420
AF-A0A7C3C1B0-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9684 77 581 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A848Z800-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9648 462 581 GO:0004814
GO:0005524
GO:0006420

Feature Viewer

pLDDT pTM Quality
91.42 0.9 High
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Predicted Structure (AlphaFold2)

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