F387457

General Info

Members Datasets Scaffolds Average Seq Length
286 183 572 334

Family's Representative Sequence

Representative Sequence 3300025915|Ga0207693_10165943|Ga0207693_101659432
Length 375
Sequence MQRAIGRAGRQPELVPSTSWQGSGLNARKRVEADLLFGSSLGKLIFMEEYDLICIGAGPTGLACAIEAVRAGLKPLVIDKGAICNSIYHYPVNMVFFTTPELLEIGDLPLVSPAEKPTRVEALKYYRKAAEHYRLKLKLYEKVTRLDGTDGHFIVSTRTARGDERSYRAAKVVIATGYYDLPNELGIPGENLPHVSHYYTEPHEFWNRDVVVVGGKNSAAEAALDLWRNGARVSMVHRKAELGATIKYWVRPDIQNRIAAGQIPMHWNSTVQEITADTVVIQNGAGQQPLPAKQVFLLTGYHPDFEFIESLGVQLDPVTKKPTMDPETHESNVPGLYLAGVVIGGKHTSEIFIENGRFHGKQIVQALTRGAAKTA

Samples

Sample ID Description Type Environment
1 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
63 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
114 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
115 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
116 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
117 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
118 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
131 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
132 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
138 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
139 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
181 2738541295 Bacillus sp. OK085 Isolate Unclassified
182 2818991459 Paenibacillus sp. 597 Isolate Unclassified
183 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.9
Metatranscriptomes 0.7
Isolates 1.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0
Rhizoplane 1.75
Rhizosphere 95.1
Stem 0
Stem Tuber 0
Unclassified 13.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207693_10165943 3300025915 Bacteria 1738
2 Ga0070658_10028562 3300005327 Bacteria 4479
3 Ga0070676_10005954 3300005328 Bacteria 6508
4 Ga0070690_100015223 3300005330 Bacteria 4584
5 Ga0070690_100065462 3300005330 Bacteria 2350
6 Ga0068869_100009766 3300005334 Bacteria 6233
7 Ga0070666_10035879 3300005335 Bacteria 3288
8 Ga0068868_100024346 3300005338 Bacteria 4594
9 Ga0070689_100018060 3300005340 Bacteria 5189
10 Ga0070669_100000073 3300005353 Bacteria 99085
11 Ga0070675_100064038 3300005354 Archaea 3040
12 Ga0070674_100006770 3300005356 Bacteria 6711
13 Ga0070673_100010088 3300005364 Bacteria 6376
14 Ga0070667_100089228 3300005367 Bacteria 2648
15 Ga0070667_100098726 3300005367 Bacteria 2520
16 Ga0070709_10006427 3300005434 Bacteria 6410
17 Ga0070713_100027572 3300005436 Bacteria 4473
18 Ga0070713_100448140 3300005436 Bacteria 1212
19 Ga0070701_10002691 3300005438 Bacteria 6891
20 Ga0070711_100063362 3300005439 Unclassified 2580
21 Ga0070705_100007893 3300005440 Bacteria 5257
22 Ga0070705_100078921 3300005440 Bacteria 2015
23 Ga0070700_100025534 3300005441 Bacteria 3479
24 Ga0070708_100003780 3300005445 Bacteria 11879
25 Ga0070708_100024500 3300005445 Bacteria 5151
26 Ga0070708_100061685 3300005445 Bacteria 3350
27 Ga0070708_100080309 3300005445 Bacteria 2951
28 Ga0070708_100182955 3300005445 Bacteria 1959
29 Ga0070678_100014610 3300005456 Bacteria 4962
30 Ga0070678_100282884 3300005456 Unclassified 1403
31 Ga0068867_100041519 3300005459 Bacteria 3361
32 Ga0068867_100207077 3300005459 Unclassified 1573
33 Ga0070685_10081888 3300005466 Bacteria 1936
34 Ga0070706_100005585 3300005467 Bacteria 11961
35 Ga0070706_100016293 3300005467 Bacteria 6867
36 Ga0070706_100061432 3300005467 Bacteria 3470
37 Ga0070707_100002850 3300005468 Bacteria 16457
38 Ga0070707_100095193 3300005468 Bacteria 2884
39 Ga0070707_100437770 3300005468 Unclassified 1268
40 Ga0070698_100002940 3300005471 Bacteria 18744
41 Ga0070698_100007560 3300005471 Bacteria 11754
42 Ga0070698_100009028 3300005471 Bacteria 10720
43 Ga0070699_100063298 3300005518 Unclassified 3207
44 Ga0070699_100094043 3300005518 Unclassified 2623
45 Ga0070699_100116338 3300005518 Bacteria 2350
46 Ga0070699_100247192 3300005518 Bacteria 1593
47 Ga0070679_100053169 3300005530 Bacteria 4032
48 Ga0070697_100006947 3300005536 Bacteria 8801
49 Ga0070697_100007382 3300005536 Bacteria 8557
50 Ga0070697_100382690 3300005536 Unclassified 1219
51 Ga0070672_100031091 3300005543 Bacteria 4016
52 Ga0070686_100047304 3300005544 Archaea 2720
53 Ga0070686_100085813 3300005544 Bacteria 2095
54 Ga0070686_100093596 3300005544 Bacteria 2015
55 Ga0070695_100043809 3300005545 Unclassified 2847
56 Ga0070696_100006302 3300005546 Bacteria 7944
57 Ga0070693_100001345 3300005547 Bacteria 11065
58 Ga0070665_100003645 3300005548 Bacteria 16315
59 Ga0070704_100072235 3300005549 Archaea 2509
60 Ga0068856_100212875 3300005614 Bacteria 1948
61 Ga0068859_100055344 3300005617 Bacteria 3992
62 Ga0068866_10067044 3300005718 Bacteria 1883
63 Ga0068861_100089959 3300005719 Bacteria 2420
64 Ga0068863_100041141 3300005841 Bacteria 4393
65 Ga0068863_100047020 3300005841 Bacteria 4095
66 Ga0068858_100033401 3300005842 Bacteria 4775
67 Ga0068862_100000537 3300005844 Bacteria 39634
68 Ga0068862_100156775 3300005844 Unclassified 2030
69 Ga0070717_10061109 3300006028 Bacteria 3122
70 Ga0075363_100016680 3300006048 Archaea 3631
71 Ga0075364_10159069 3300006051 Bacteria 1524
72 Ga0070716_100006684 3300006173 Bacteria 5646
73 Ga0070716_100020204 3300006173 Unclassified 3493
74 Ga0070716_100040926 3300006173 Bacteria 2580
75 Ga0070716_100162385 3300006173 Bacteria 1449
76 Ga0070712_100042203 3300006175 Bacteria 3136
77 Ga0070712_100081177 3300006175 Unclassified 2349
78 Ga0075362_10002489 3300006177 Bacteria 6200
79 Ga0075367_10000582 3300006178 Bacteria 13989
80 Ga0075366_10001339 3300006195 Bacteria 12309
81 Ga0097621_100005301 3300006237 Bacteria 9081
82 Ga0068871_100019726 3300006358 Bacteria 5152
83 Ga0068871_100141655 3300006358 Bacteria 2045
84 Ga0075428_100130564 3300006844 Archaea 2733
85 Ga0075431_100010439 3300006847 Bacteria 9337
86 Ga0075431_100277126 3300006847 Bacteria 1698
87 Ga0075433_10113088 3300006852 Bacteria 2408
88 Ga0075433_10207799 3300006852 Bacteria 1740
89 Ga0075434_100007280 3300006871 Bacteria 10238
90 Ga0075434_100035899 3300006871 Bacteria 4901
91 Ga0075434_100069718 3300006871 Bacteria 3505
92 Ga0075429_100035450 3300006880 Bacteria 4339
93 Ga0075436_100001363 3300006914 Bacteria 16617
94 Ga0075436_100096628 3300006914 Bacteria 2055
95 Ga0097620_100055347 3300006931 Bacteria 3992
96 Ga0075435_100011427 3300007076 Bacteria 6532
97 Ga0075435_100187091 3300007076 Bacteria 1751
98 Ga0099794_10016759 3300007265 Unclassified 3254
99 Ga0099794_10030068 3300007265 Bacteria 2534
100 Ga0099794_10052935 3300007265 Unclassified 1957
101 Ga0099795_10011158 3300007788 Unclassified 2674
102 Ga0111539_10000130 3300009094 Bacteria 85290
103 Ga0105245_10035212 3300009098 Archaea 4443
104 Ga0105248_10017761 3300009177 Bacteria 7848
105 Ga0105248_10093141 3300009177 Bacteria 3393
106 Ga0105249_10018362 3300009553 Bacteria 6220
107 Ga0105239_10155331 3300010375 Bacteria 2555
108 Ga0105246_10264916 3300011119 Bacteria 1371
109 Ga0157374_10021264 3300013296 Bacteria 5770
110 Ga0157378_10000471 3300013297 Bacteria 38401
111 Ga0157378_10000696 3300013297 Bacteria 31646
112 Ga0163162_10135818 3300013306 Bacteria 2570
113 Ga0163162_10147697 3300013306 Bacteria 2468
114 Ga0157375_10159877 3300013308 Archaea 2394
115 Ga0157380_10295330 3300014326 Bacteria 1490
116 Ga0157377_10039810 3300014745 Bacteria 2601
117 Ga0157379_10103769 3300014968 Unclassified 2551
118 Ga0157376_10000004 3300014969 Bacteria 508493
119 Ga0207653_10013244 3300025885 Unclassified 2581
120 Ga0207692_10092851 3300025898 Unclassified 1641
121 Ga0207642_10163217 3300025899 Bacteria 1198
122 Ga0207645_10014595 3300025907 Bacteria 5252
123 Ga0207684_10012866 3300025910 Bacteria 7247
124 Ga0207693_10040633 3300025915 Bacteria 3663
125 Ga0207693_10073375 3300025915 Unclassified 2678
126 Ga0207652_10038767 3300025921 Bacteria 4041
127 Ga0207646_10000843 3300025922 Bacteria 39711
128 Ga0207646_10063865 3300025922 Unclassified 3287
129 Ga0207681_10000064 3300025923 Bacteria 99054
130 Ga0207687_10055913 3300025927 Archaea 2766
131 Ga0207700_10072517 3300025928 Unclassified 2656
132 Ga0207700_10131387 3300025928 Bacteria 2045
133 Ga0207669_10195748 3300025937 Bacteria 1462
134 Ga0207665_10000030 3300025939 Bacteria 94900
135 Ga0207665_10005031 3300025939 Bacteria 8825
136 Ga0207665_10005048 3300025939 Bacteria 8808
137 Ga0207665_10032315 3300025939 Bacteria 3465
138 Ga0207691_10192136 3300025940 Bacteria 1780
139 Ga0207689_10017488 3300025942 Bacteria 6067
140 Ga0207651_10065651 3300025960 Bacteria 2546
141 Ga0207651_10432057 3300025960 Bacteria 1126
142 Ga0207712_10043868 3300025961 Archaea 3087
143 Ga0207677_10084483 3300026023 Archaea 2288
144 Ga0207678_10014202 3300026067 Bacteria 7001
145 Ga0207708_10012120 3300026075 Bacteria 6428
146 Ga0207641_10392462 3300026088 Bacteria 1331
147 Ga0207648_10001392 3300026089 Bacteria 26624
148 Ga0207675_100004957 3300026118 Bacteria 12832
149 Ga0207683_10002272 3300026121 Bacteria 16843
150 Ga0209588_1014140 3300027671 Bacteria 2442
151 Ga0209588_1015514 3300027671 Bacteria 2343
152 Ga0209588_1033163 3300027671 Bacteria 1656
153 Ga0207428_10000197 3300027907 Bacteria 84315
154 Ga0268266_10000438 3300028379 Bacteria 62337
155 Ga0268265_10005191 3300028380 Bacteria 8922
156 Ga0268265_10161571 3300028380 Unclassified 1903
157 Ga0268264_10005999 3300028381 Bacteria 10286
158 Ga0268264_10045772 3300028381 Bacteria 3634
159 Ga0268264_10138478 3300028381 Unclassified 2167
160 Ga0265338_10057183 3300028800 Bacteria 3452
161 Ga0265765_1000316 3300030879 Bacteria 3569
162 Ga0265760_10009545 3300031090 Bacteria 2771
163 Ga0265325_10007399 3300031241 Bacteria 6573
164 Ga0265331_10087390 3300031250 Bacteria 1444
165 Ga0265316_10014190 3300031344 Bacteria 7028
166 Ga0265316_10044976 3300031344 Bacteria 3508
167 Ga0265313_10054917 3300031595 Bacteria 1889
168 Ga0373929_0000016 3300035085 Bacteria 128712
169 Ga0373953_0041263 3300035117 Bacteria 1836
170 Ga0373954_0067956 3300035118 Bacteria 1690
171 Ga0373956_0025162 3300035119 Bacteria 2570
172 Ga0373946_0002968 3300035171 Bacteria 6017
173 Ga0373955_0001942 3300035172 Bacteria 8917
174 Ga0373955_0157601 3300035172 Unclassified 1338
175 Ga0373961_0002306 3300035241 Bacteria 4986
176 Ga0373935_0002935 3300035692 Bacteria 9824
177 Ga0373935_0196035 3300035692 Unclassified 1393
178 Ga0373927_0000439 3300035695 Bacteria 31951
179 Ga0373927_0127983 3300035695 Bacteria 1658
180 Ga0373933_0010777 3300035724 Bacteria 5016
181 Ga0373933_0010883 3300035724 Bacteria 4994
182 Ga0373937_0000076 3300036401 Bacteria 89708
183 Ga0373937_0000584 3300036401 Bacteria 32345
184 Ga0373937_0059069 3300036401 Bacteria 3524
185 Ga0373937_0264579 3300036401 Bacteria 1622
186 Ga0373925_0000576 3300037068 Bacteria 35563
187 Ga0453684_0070019 3300044712 Bacteria 4445
188 Ga0495592_0105927 3300046454 Bacteria 1997
189 Ga0495651_0022681 3300046462 Bacteria 4879
190 Ga0495651_0232828 3300046462 Unclassified 1267
191 Ga0495653_0079260 3300046463 Bacteria 2433
192 Ga0495580_0001747 3300046472 Bacteria 19101
193 Ga0495580_0003150 3300046472 Bacteria 14135
194 Ga0495580_0022023 3300046472 Bacteria 4696
195 Ga0495580_0092574 3300046472 Unclassified 2104
196 Ga0495582_0000093 3300046473 Bacteria 46052
197 Ga0495582_0011102 3300046473 Bacteria 4959
198 Ga0495662_0012137 3300046476 Bacteria 4208
199 Ga0495664_0013857 3300046477 Bacteria 4572
200 Ga0495594_0046830 3300046499 Bacteria 2375
201 Ga0495608_0013375 3300046511 Bacteria 5692
202 Ga0495608_0016813 3300046511 Bacteria 5062
203 Ga0495628_0023378 3300046516 Bacteria 5074
204 Ga0495628_0081660 3300046516 Unclassified 2511
205 Ga0495628_0321388 3300046516 Bacteria 1142
206 Ga0495630_0012086 3300046517 Bacteria 6259
207 Ga0495630_0032346 3300046517 Bacteria 3897
208 Ga0495630_0045667 3300046517 Bacteria 3274
209 Ga0495630_0053019 3300046517 Bacteria 3036
210 Ga0495666_0012290 3300046526 Bacteria 4269
211 Ga0495666_0056004 3300046526 Unclassified 1889
212 Ga0495652_0053721 3300046529 Bacteria 3433
213 Ga0495665_0003582 3300046531 Bacteria 8429
214 Ga0495586_0002951 3300046535 Bacteria 9173
215 Ga0495586_0067446 3300046535 Bacteria 1951
216 Ga0495587_0002760 3300046536 Bacteria 11721
217 Ga0495587_0003864 3300046536 Bacteria 9937
218 Ga0495667_0025413 3300046559 Bacteria 3991
219 Ga0495657_0118867 3300046675 Unclassified 1666
220 Ga0495623_0021330 3300046679 Unclassified 4184
221 Ga0495623_0026680 3300046679 Bacteria 3717
222 Ga0495623_0030047 3300046679 Unclassified 3496
223 Ga0495647_0006348 3300046681 Bacteria 3911
224 Ga0495658_0027349 3300046683 Bacteria 3068
225 Ga0495669_0017299 3300046684 Bacteria 3093
226 Ga0495613_0031870 3300046689 Bacteria 3915
227 Ga0495613_0061663 3300046689 Bacteria 2745
228 Ga0495624_0013966 3300046690 Bacteria 5466
229 Ga0495581_0016511 3300047315 Bacteria 4290
230 Ga0495604_0011200 3300047317 Bacteria 7120
231 Ga0495604_0035388 3300047317 Bacteria 3944
232 Ga0495604_0044650 3300047317 Bacteria 3460
233 Ga0495674_0024572 3300047319 Bacteria 5534
234 Ga0495674_0082722 3300047319 Unclassified 2752
235 Ga0495674_0110570 3300047319 Bacteria 2330
236 Ga0495674_0295576 3300047319 Bacteria 1324
237 Ga0495676_0051726 3300047321 Bacteria 3284
238 Ga0495676_0265402 3300047321 Unclassified 1167
239 Ga0495680_0000954 3300047322 Bacteria 32149
240 Ga0495680_0037919 3300047322 Bacteria 3857
241 Ga0495675_0011207 3300047444 Bacteria 5623
242 Ga0495675_0029940 3300047444 Bacteria 3473
243 Ga0495684_0013787 3300047471 Bacteria 6220
244 Ga0495684_0051090 3300047471 Bacteria 3156
245 Ga0495684_0229383 3300047471 Unclassified 1358
246 Ga0495602_0000821 3300048088 Bacteria 29778
247 Ga0495602_0046862 3300048088 Unclassified 3900
248 Ga0495602_0107368 3300048088 Bacteria 2276
249 Ga0495602_0318808 3300048088 Unclassified 1131
250 Ga0495615_0000549 3300048090 Bacteria 5323
251 Ga0496102_0001574 3300048905 Bacteria 20127
252 Ga0496114_0000008 3300048917 Bacteria 420692
253 Ga0496114_0308582 3300048917 Unclassified 1397
254 Ga0496115_0064219 3300048918 Unclassified 2963
255 Ga0496115_0068841 3300048918 Bacteria 2866
256 Ga0501047_0061546 3300049581 Bacteria 3622
257 Ga0501067_0002176 3300049583 Bacteria 10805
258 Ga0501071_0010450 3300049587 Bacteria 6221
259 Ga0501075_0000320 3300049591 Bacteria 26915
260 Ga0501077_0000315 3300049593 Bacteria 28888
261 Ga0501077_0057617 3300049593 Bacteria 2467
262 Ga0501080_0025515 3300049742 Bacteria 5486
263 Ga0501045_0005043 3300049824 Bacteria 9144
264 nmdc:mga0k408_7530_c1 3300050493 Archaea 5816
265 nmdc:mga06z11_8712_c1 3300050494 Bacteria 4247
266 nmdc:mga09592_88618_c1 3300050508 Archaea 2643
267 nmdc:mga06r32_143810_c1 3300050510 Bacteria 2362
268 nmdc:mga06r32_6748_c2 3300050510 Bacteria 4848
269 nmdc:mga08y16_1296_c1 3300050511 Bacteria 24809
270 nmdc:mga0n895_186013_c1 3300050512 Bacteria 2108
271 nmdc:mga0n895_7642_c1 3300050512 Bacteria 9294
272 nmdc:mga0n895_94538_c1 3300050512 Bacteria 2993
273 nmdc:mga0rr50_185352_c1 3300050513 Bacteria 1703
274 nmdc:mga0rr50_40468_c1 3300050513 Bacteria 3389
275 nmdc:mga0rr50_87535_c1 3300050513 Bacteria 2418
276 nmdc:mga0rr50_92929_c1 3300050513 Unclassified 2353
277 nmdc:mga08x19_155588_c1 3300050514 Bacteria 1550
278 nmdc:mga08x19_20122_c1 3300050514 Bacteria 4108
279 nmdc:mga08x19_293_c1 3300050514 Bacteria 36820
280 nmdc:mga0a205_36109_c1 3300050515 Bacteria 4748
281 Ga0495612_0023965 3300053078 Bacteria 2450
282 Ga0501082_0000613 3300060353 Bacteria 31427
283 2563928915 2563366752 Bacteria 4961801
284 2738818046 2738541295 Bacteria 5730091
285 2819674583 2818991459 Bacteria 8736032
286 2928513352 2928510474 Bacteria 4815308
287 Ga0207693_10165943
288 Ga0070658_10028562
289 Ga0070676_10005954
290 Ga0070690_100015223
291 Ga0070690_100065462
292 Ga0068869_100009766
293 Ga0070666_10035879
294 Ga0068868_100024346
295 Ga0070689_100018060
296 Ga0070669_100000073
297 Ga0070675_100064038
298 Ga0070674_100006770
299 Ga0070673_100010088
300 Ga0070667_100089228
301 Ga0070667_100098726
302 Ga0070709_10006427
303 Ga0070713_100027572
304 Ga0070713_100448140
305 Ga0070701_10002691
306 Ga0070711_100063362
307 Ga0070705_100007893
308 Ga0070705_100078921
309 Ga0070700_100025534
310 Ga0070708_100003780
311 Ga0070708_100024500
312 Ga0070708_100061685
313 Ga0070708_100080309
314 Ga0070708_100182955
315 Ga0070678_100014610
316 Ga0070678_100282884
317 Ga0068867_100041519
318 Ga0068867_100207077
319 Ga0070685_10081888
320 Ga0070706_100005585
321 Ga0070706_100016293
322 Ga0070706_100061432
323 Ga0070707_100002850
324 Ga0070707_100095193
325 Ga0070707_100437770
326 Ga0070698_100002940
327 Ga0070698_100007560
328 Ga0070698_100009028
329 Ga0070699_100063298
330 Ga0070699_100094043
331 Ga0070699_100116338
332 Ga0070699_100247192
333 Ga0070679_100053169
334 Ga0070697_100006947
335 Ga0070697_100007382
336 Ga0070697_100382690
337 Ga0070672_100031091
338 Ga0070686_100047304
339 Ga0070686_100085813
340 Ga0070686_100093596
341 Ga0070695_100043809
342 Ga0070696_100006302
343 Ga0070693_100001345
344 Ga0070665_100003645
345 Ga0070704_100072235
346 Ga0068856_100212875
347 Ga0068859_100055344
348 Ga0068866_10067044
349 Ga0068861_100089959
350 Ga0068863_100041141
351 Ga0068863_100047020
352 Ga0068858_100033401
353 Ga0068862_100000537
354 Ga0068862_100156775
355 Ga0070717_10061109
356 Ga0075363_100016680
357 Ga0075364_10159069
358 Ga0070716_100006684
359 Ga0070716_100020204
360 Ga0070716_100040926
361 Ga0070716_100162385
362 Ga0070712_100042203
363 Ga0070712_100081177
364 Ga0075362_10002489
365 Ga0075367_10000582
366 Ga0075366_10001339
367 Ga0097621_100005301
368 Ga0068871_100019726
369 Ga0068871_100141655
370 Ga0075428_100130564
371 Ga0075431_100010439
372 Ga0075431_100277126
373 Ga0075433_10113088
374 Ga0075433_10207799
375 Ga0075434_100007280
376 Ga0075434_100035899
377 Ga0075434_100069718
378 Ga0075429_100035450
379 Ga0075436_100001363
380 Ga0075436_100096628
381 Ga0097620_100055347
382 Ga0075435_100011427
383 Ga0075435_100187091
384 Ga0099794_10016759
385 Ga0099794_10030068
386 Ga0099794_10052935
387 Ga0099795_10011158
388 Ga0111539_10000130
389 Ga0105245_10035212
390 Ga0105248_10017761
391 Ga0105248_10093141
392 Ga0105249_10018362
393 Ga0105239_10155331
394 Ga0105246_10264916
395 Ga0157374_10021264
396 Ga0157378_10000471
397 Ga0157378_10000696
398 Ga0163162_10135818
399 Ga0163162_10147697
400 Ga0157375_10159877
401 Ga0157380_10295330
402 Ga0157377_10039810
403 Ga0157379_10103769
404 Ga0157376_10000004
405 Ga0207653_10013244
406 Ga0207692_10092851
407 Ga0207642_10163217
408 Ga0207645_10014595
409 Ga0207684_10012866
410 Ga0207693_10040633
411 Ga0207693_10073375
412 Ga0207652_10038767
413 Ga0207646_10000843
414 Ga0207646_10063865
415 Ga0207681_10000064
416 Ga0207687_10055913
417 Ga0207700_10072517
418 Ga0207700_10131387
419 Ga0207669_10195748
420 Ga0207665_10000030
421 Ga0207665_10005031
422 Ga0207665_10005048
423 Ga0207665_10032315
424 Ga0207691_10192136
425 Ga0207689_10017488
426 Ga0207651_10065651
427 Ga0207651_10432057
428 Ga0207712_10043868
429 Ga0207677_10084483
430 Ga0207678_10014202
431 Ga0207708_10012120
432 Ga0207641_10392462
433 Ga0207648_10001392
434 Ga0207675_100004957
435 Ga0207683_10002272
436 Ga0209588_1014140
437 Ga0209588_1015514
438 Ga0209588_1033163
439 Ga0207428_10000197
440 Ga0268266_10000438
441 Ga0268265_10005191
442 Ga0268265_10161571
443 Ga0268264_10005999
444 Ga0268264_10045772
445 Ga0268264_10138478
446 Ga0265338_10057183
447 Ga0265765_1000316
448 Ga0265760_10009545
449 Ga0265325_10007399
450 Ga0265331_10087390
451 Ga0265316_10014190
452 Ga0265316_10044976
453 Ga0265313_10054917
454 Ga0373929_0000016
455 Ga0373953_0041263
456 Ga0373954_0067956
457 Ga0373956_0025162
458 Ga0373946_0002968
459 Ga0373955_0001942
460 Ga0373955_0157601
461 Ga0373961_0002306
462 Ga0373935_0002935
463 Ga0373935_0196035
464 Ga0373927_0000439
465 Ga0373927_0127983
466 Ga0373933_0010777
467 Ga0373933_0010883
468 Ga0373937_0000076
469 Ga0373937_0000584
470 Ga0373937_0059069
471 Ga0373937_0264579
472 Ga0373925_0000576
473 Ga0453684_0070019
474 Ga0495592_0105927
475 Ga0495651_0022681
476 Ga0495651_0232828
477 Ga0495653_0079260
478 Ga0495580_0001747
479 Ga0495580_0003150
480 Ga0495580_0022023
481 Ga0495580_0092574
482 Ga0495582_0000093
483 Ga0495582_0011102
484 Ga0495662_0012137
485 Ga0495664_0013857
486 Ga0495594_0046830
487 Ga0495608_0013375
488 Ga0495608_0016813
489 Ga0495628_0023378
490 Ga0495628_0081660
491 Ga0495628_0321388
492 Ga0495630_0012086
493 Ga0495630_0032346
494 Ga0495630_0045667
495 Ga0495630_0053019
496 Ga0495666_0012290
497 Ga0495666_0056004
498 Ga0495652_0053721
499 Ga0495665_0003582
500 Ga0495586_0002951
501 Ga0495586_0067446
502 Ga0495587_0002760
503 Ga0495587_0003864
504 Ga0495667_0025413
505 Ga0495657_0118867
506 Ga0495623_0021330
507 Ga0495623_0026680
508 Ga0495623_0030047
509 Ga0495647_0006348
510 Ga0495658_0027349
511 Ga0495669_0017299
512 Ga0495613_0031870
513 Ga0495613_0061663
514 Ga0495624_0013966
515 Ga0495581_0016511
516 Ga0495604_0011200
517 Ga0495604_0035388
518 Ga0495604_0044650
519 Ga0495674_0024572
520 Ga0495674_0082722
521 Ga0495674_0110570
522 Ga0495674_0295576
523 Ga0495676_0051726
524 Ga0495676_0265402
525 Ga0495680_0000954
526 Ga0495680_0037919
527 Ga0495675_0011207
528 Ga0495675_0029940
529 Ga0495684_0013787
530 Ga0495684_0051090
531 Ga0495684_0229383
532 Ga0495602_0000821
533 Ga0495602_0046862
534 Ga0495602_0107368
535 Ga0495602_0318808
536 Ga0495615_0000549
537 Ga0496102_0001574
538 Ga0496114_0000008
539 Ga0496114_0308582
540 Ga0496115_0064219
541 Ga0496115_0068841
542 Ga0501047_0061546
543 Ga0501067_0002176
544 Ga0501071_0010450
545 Ga0501075_0000320
546 Ga0501077_0000315
547 Ga0501077_0057617
548 Ga0501080_0025515
549 Ga0501045_0005043
550 nmdc:mga0k408_7530_c1
551 nmdc:mga06z11_8712_c1
552 nmdc:mga09592_88618_c1
553 nmdc:mga06r32_143810_c1
554 nmdc:mga06r32_6748_c2
555 nmdc:mga08y16_1296_c1
556 nmdc:mga0n895_186013_c1
557 nmdc:mga0n895_7642_c1
558 nmdc:mga0n895_94538_c1
559 nmdc:mga0rr50_185352_c1
560 nmdc:mga0rr50_40468_c1
561 nmdc:mga0rr50_87535_c1
562 nmdc:mga0rr50_92929_c1
563 nmdc:mga08x19_155588_c1
564 nmdc:mga08x19_20122_c1
565 nmdc:mga08x19_293_c1
566 nmdc:mga0a205_36109_c1
567 Ga0495612_0023965
568 Ga0501082_0000613
569 2563928915
570 2738818046
571 2819674583
572 2928513352

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

53

340

0.94

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

209

284

0.93

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

110

245

0.89

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

50

369

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mo2-assembly1.cif.gz_B-2 crystal structure of udp-n-acetylgalactopyranose mutase from campylobacter jejuni 0.972 4 36
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.9659 4 328
7a7b-assembly1.cif.gz_D bacillithiol disulfide reductase bdr (ypda) from staphylococcus aureus 0.96 4 329
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.9544 4 328
7a7b-assembly1.cif.gz_D bacillithiol disulfide reductase bdr (ypda) from staphylococcus aureus 0.9484 4 329
ID Description Score Start End Superfamily
af_A0A1D6ESV1_1_290_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9802 165 199 3.50.50.60
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9736 4 153 3.50.50.60
af_Q5AA38_4_182_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9701 164 193 3.40.50.720
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9542 4 153 3.50.50.60
af_I1LIA8_18_345_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9464 6 36 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A3N0EPU8-F1-model_v4 YpdA family putative bacillithiol disulfide reductase 0.9804 3 328 GO:0016491
AF-A0A2U8ECX9-F1-model_v4 Thioredoxin reductase 0.9799 40 331 GO:0016491
AF-A0A524LT09-F1-model_v4 FAD-binding protein 0.9783 3 93
AF-A0A0X8X2W0-F1-model_v4 Uncharacterized protein 0.9779 4 104
AF-A0A841I1E2-F1-model_v4 Thioredoxin reductase (NADPH) (EC 1.8.1.9) 0.9778 4 331 GO:0016491

Map