F387450

General Info

Members Datasets Scaffolds Average Seq Length
286 189 572 252

Family's Representative Sequence

Representative Sequence 3300025904|Ga0207647_10002247|Ga0207647_100022474
Length 295
Sequence VVAAGIGVHGVSTSHDVFRLPDLWQLHLYHYEGALSLGQSVHPIRPGHASLVPPNTEVHFHYRGRSEHFYAHLRLHDGGTARVVPVMQDAAAESTRLGDLLRHAVTAMPTSPPRATAEVWAALWRIAELPRGEGAGRRHPFVAAAQAYVEEHLAGPLSVPDIARAVGISHTHLTRVFRAETGLTVVSYIRHRRLQRARHLLLSSTLSITAIAAAVGIADLQAFNKACRRELGASPRDIRAAAPAGLESVQQQQPTTQARREGSSFLWLLEILGKTAKSSCLATQAQCQAAESDRD

Samples

Sample ID Description Type Environment
1 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
11 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
12 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
13 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
16 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
17 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
20 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
24 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
29 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
30 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
31 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
32 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
33 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
34 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
35 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
36 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
37 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
42 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
43 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
44 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
45 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
46 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
47 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
48 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
49 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
50 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
51 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
52 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
53 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
54 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
55 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
56 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
59 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
72 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
73 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
74 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
75 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
82 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
83 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
115 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
129 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
130 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
131 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
132 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
133 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
134 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
135 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
136 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
137 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
138 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
143 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
144 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
145 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
148 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
149 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
150 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
151 2643221647 Streptomyces sp. Root369 Isolate Unclassified
152 2643221714 Streptomyces sp. Root264 Isolate Unclassified
153 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
154 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
155 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
156 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
157 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
158 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
159 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
160 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
161 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
162 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
163 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
164 2862574272 Streptomyces sp. AcE210 Isolate Nodule
165 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
166 2867428634 Streptomyces sp. RP5T Isolate Unclassified
167 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
168 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
169 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
170 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
171 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
172 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
173 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
174 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
175 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
176 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
177 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
178 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
179 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
180 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
181 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
182 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
183 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
184 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
185 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
186 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
187 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
188 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
189 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.97
Metatranscriptomes 0
Isolates 15.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.74
Nodule 1.05
Rhizoplane 0
Rhizosphere 71.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207647_10002247 3300025904 Bacteria 14716
2 JGI25406J46586_10010434 3300003203 Bacteria 4122
3 rootH1_10002558 3300003316 Bacteria 9464
4 rootH2_10028913 3300003320 Bacteria 12140
5 rootL2_10204835 3300003322 Bacteria 3353
6 rootH1_10012325 3300003323 Bacteria 3620
7 rootH1_10012326 3300003323 Bacteria 3964
8 rootH1_10052342 3300003323 Bacteria 1210
9 Ga0068855_100767051 3300005563 Bacteria 1027
10 Ga0081539_10001268 3300005985 Bacteria 44566
11 Ga0075363_100261356 3300006048 Bacteria 998
12 Ga0075370_10201808 3300006353 Bacteria 1173
13 Ga0105243_10578630 3300009148 Bacteria 1078
14 Ga0105032_101452 3300009979 Bacteria 2167
15 Ga0157369_10292800 3300013105 Bacteria 1694
16 Ga0157372_10683465 3300013307 Bacteria 1195
17 Ga0182008_10000906 3300014497 Bacteria 20610
18 Ga0182007_10000934 3300015262 Bacteria 16083
19 Ga0182005_1022183 3300015265 Bacteria 1740
20 Ga0183367_1012 3300015688 Bacteria 347438
21 Ga0207426_1005361 3300025302 Bacteria 5886
22 Ga0207667_10685506 3300025949 Bacteria 1028
23 Ga0307517_10021148 3300028786 Bacteria 8242
24 Ga0307515_10000050 3300028794 Bacteria 275624
25 Ga0307515_10007036 3300028794 Bacteria 22346
26 Ga0307515_10025932 3300028794 Bacteria 10113
27 Ga0307515_10350718 3300028794 Bacteria 1122
28 Ga0307511_10001277 3300030521 Bacteria 26678
29 Ga0307511_10017538 3300030521 Bacteria 6868
30 Ga0307512_10003239 3300030522 Bacteria 19231
31 Ga0307512_10006966 3300030522 Bacteria 11293
32 Ga0307512_10021185 3300030522 Bacteria 5865
33 Ga0307513_10000201 3300031456 Bacteria 86237
34 Ga0307513_10006462 3300031456 Bacteria 15311
35 Ga0307513_10044669 3300031456 Bacteria 4851
36 Ga0307513_10045710 3300031456 Bacteria 4782
37 Ga0307509_10010291 3300031507 Bacteria 11490
38 Ga0307509_10021330 3300031507 Bacteria 7324
39 Ga0307508_10022252 3300031616 Bacteria 5760
40 Ga0307508_10041418 3300031616 Bacteria 4134
41 Ga0307508_10046567 3300031616 Bacteria 3872
42 Ga0307508_10313557 3300031616 Bacteria 1160
43 Ga0307516_10039109 3300031730 Bacteria 4730
44 Ga0307516_10131165 3300031730 Bacteria 2285
45 Ga0307516_10133790 3300031730 Bacteria 2256
46 Ga0307516_10137961 3300031730 Bacteria 2211
47 Ga0307518_10101192 3300031838 Bacteria 2063
48 Ga0307518_10124528 3300031838 Bacteria 1819
49 Ga0307518_10133314 3300031838 Bacteria 1743
50 Ga0307411_10000275 3300032005 Bacteria 17018
51 Ga0307507_10060525 3300033179 Bacteria 3534
52 Ga0307510_10012384 3300033180 Bacteria 10112
53 Ga0307510_10024181 3300033180 Bacteria 7023
54 Ga0307510_10049900 3300033180 Bacteria 4446
55 Ga0307510_10124817 3300033180 Bacteria 2267
56 Ga0307510_10321777 3300033180 Bacteria 1003
57 Ga0373948_0010822 3300034817 Bacteria 1599
58 Ga0373940_0013504 3300035088 Bacteria 1978
59 Ga0373942_0000149 3300035207 Bacteria 16701
60 Ga0373962_0000555 3300035242 Bacteria 8411
61 Ga0373925_0119810 3300037068 Bacteria 2042
62 Ga0395900_0269170 3300037418 Bacteria 1699
63 Ga0395905_0575331 3300037471 Bacteria 1028
64 Ga0395901_0543816 3300038443 Bacteria 1178
65 Ga0439436_0006190 3300041404 Bacteria 3674
66 Ga0439436_0015563 3300041404 Bacteria 2287
67 Ga0439439_0002027 3300041406 Bacteria 4217
68 Ga0439439_0007042 3300041406 Bacteria 2620
69 Ga0451853_2361057 3300041512 Bacteria 2472
70 Ga0439433_0012088 3300041999 Bacteria 1892
71 Ga0439442_011615 3300042002 Bacteria 1795
72 Ga0439448_0001209 3300042005 Bacteria 6587
73 Ga0439448_0107855 3300042005 Bacteria 950
74 Ga0439449_0000806 3300042007 Bacteria 12069
75 Ga0439449_0016105 3300042007 Bacteria 2811
76 Ga0439457_000060 3300042014 Bacteria 23283
77 Ga0439457_004702 3300042014 Bacteria 3528
78 Ga0439457_006740 3300042014 Bacteria 2787
79 Ga0439462_0001363 3300042015 Bacteria 5398
80 Ga0439462_0079282 3300042015 Bacteria 896
81 Ga0450903_000055 3300042138 Bacteria 23409
82 Ga0450906_006676 3300042145 Bacteria 2312
83 Ga0439458_0000060 3300042157 Bacteria 19058
84 Ga0450908_008109 3300042184 Bacteria 1970
85 Ga0466969_0043197 3300044656 Bacteria 2246
86 Ga0466972_0001544 3300044658 Bacteria 11213
87 Ga0466966_0003426 3300044684 Bacteria 10463
88 Ga0466966_0112419 3300044684 Bacteria 1678
89 Ga0466966_0157899 3300044684 Bacteria 1381
90 Ga0466961_0006091 3300044693 Bacteria 7651
91 Ga0466964_0109907 3300044706 Bacteria 1228
92 Ga0466971_0000148 3300044719 Bacteria 26247
93 Ga0466970_0037667 3300044765 Bacteria 2564
94 Ga0466960_0252001 3300044901 Bacteria 981
95 Ga0466959_0000406 3300045049 Bacteria 25196
96 Ga0466967_0043199 3300045976 Bacteria 3901
97 Ga0495627_060533 3300046453 Bacteria 1121
98 Ga0495592_0012981 3300046454 Bacteria 6335
99 Ga0495592_0015987 3300046454 Bacteria 5693
100 Ga0495592_0074186 3300046454 Bacteria 2471
101 Ga0495592_0229308 3300046454 Bacteria 1237
102 Ga0495603_0008620 3300046455 Bacteria 6162
103 Ga0495629_0013980 3300046459 Bacteria 5787
104 Ga0495629_0124022 3300046459 Bacteria 1799
105 Ga0495629_0176965 3300046459 Bacteria 1479
106 Ga0495629_0190019 3300046459 Bacteria 1421
107 Ga0495638_0021480 3300046460 Bacteria 4253
108 Ga0495638_0143598 3300046460 Bacteria 1390
109 Ga0495651_0000044 3300046462 Bacteria 91242
110 Ga0495651_0024258 3300046462 Bacteria 4721
111 Ga0495651_0039690 3300046462 Bacteria 3664
112 Ga0495651_0110527 3300046462 Bacteria 2033
113 Ga0495664_0002234 3300046477 Bacteria 10363
114 Ga0495664_0048849 3300046477 Bacteria 2512
115 Ga0495664_0226904 3300046477 Bacteria 1130
116 Ga0495584_0118280 3300046491 Bacteria 1342
117 Ga0495585_0062811 3300046492 Bacteria 2039
118 Ga0495585_0064308 3300046492 Bacteria 2012
119 Ga0495594_0167003 3300046499 Bacteria 1251
120 Ga0495607_0062158 3300046501 Bacteria 2118
121 Ga0495583_0050273 3300046506 Bacteria 1905
122 Ga0495606_0001022 3300046507 Bacteria 40570
123 Ga0495606_0005554 3300046507 Bacteria 12022
124 Ga0495608_0215174 3300046511 Bacteria 1207
125 Ga0495618_0006589 3300046514 Bacteria 7044
126 Ga0495618_0143092 3300046514 Bacteria 1529
127 Ga0495620_0013785 3300046515 Bacteria 4132
128 Ga0495620_0059927 3300046515 Bacteria 1589
129 Ga0495620_0115833 3300046515 Bacteria 1059
130 Ga0495628_0001427 3300046516 Bacteria 21937
131 Ga0495628_0206574 3300046516 Bacteria 1478
132 Ga0495628_0431915 3300046516 Bacteria 958
133 Ga0495631_0072459 3300046518 Bacteria 1488
134 Ga0495631_0074586 3300046518 Bacteria 1464
135 Ga0495632_0061245 3300046519 Bacteria 1827
136 Ga0495643_0000962 3300046522 Bacteria 29506
137 Ga0495648_0021551 3300046524 Bacteria 4459
138 Ga0495652_0006810 3300046529 Bacteria 10593
139 Ga0495652_0016635 3300046529 Bacteria 6574
140 Ga0495652_0083994 3300046529 Bacteria 2620
141 Ga0495652_0188843 3300046529 Bacteria 1574
142 Ga0495586_0077181 3300046535 Bacteria 1826
143 Ga0495587_0003167 3300046536 Bacteria 10998
144 Ga0495597_0025180 3300046542 Bacteria 2740
145 Ga0495645_0044763 3300046543 Bacteria 3228
146 Ga0495645_0122659 3300046543 Bacteria 1828
147 Ga0495622_0013986 3300046557 Bacteria 3724
148 Ga0495622_0141581 3300046557 Bacteria 1092
149 Ga0495633_0038195 3300046558 Bacteria 2295
150 Ga0495668_0001979 3300046616 Bacteria 17975
151 Ga0495668_0057811 3300046616 Bacteria 2140
152 Ga0495668_0169504 3300046616 Bacteria 1196
153 Ga0495634_0005441 3300046642 Bacteria 9796
154 Ga0495634_0182366 3300046642 Bacteria 1313
155 Ga0495611_0002873 3300046648 Bacteria 7691
156 Ga0495625_0001209 3300046660 Bacteria 32800
157 Ga0495625_0005852 3300046660 Bacteria 11084
158 Ga0495625_0022915 3300046660 Bacteria 4778
159 Ga0495625_0090545 3300046660 Bacteria 2115
160 Ga0495635_0001576 3300046663 Bacteria 15320
161 Ga0495635_0021682 3300046663 Bacteria 4478
162 Ga0495588_0002112 3300046674 Bacteria 8529
163 Ga0495657_0017598 3300046675 Bacteria 5184
164 Ga0495657_0109497 3300046675 Bacteria 1751
165 Ga0495623_0020006 3300046679 Bacteria 4327
166 Ga0495646_0004913 3300046680 Bacteria 8444
167 Ga0495646_0023186 3300046680 Bacteria 3908
168 Ga0495658_0078651 3300046683 Bacteria 1931
169 Ga0495613_0024967 3300046689 Bacteria 4454
170 Ga0495613_0129641 3300046689 Bacteria 1806
171 Ga0495613_0201366 3300046689 Bacteria 1403
172 Ga0495670_0038856 3300046691 Bacteria 2373
173 Ga0495671_0020816 3300046692 Bacteria 3452
174 Ga0495671_0076466 3300046692 Bacteria 1642
175 Ga0495589_0043634 3300046794 Bacteria 2231
176 Ga0495600_0012212 3300046809 Bacteria 5365
177 Ga0495600_0013576 3300046809 Bacteria 5122
178 Ga0495600_0276635 3300046809 Bacteria 1063
179 Ga0495604_0004897 3300047317 Bacteria 10615
180 Ga0495604_0028596 3300047317 Bacteria 4435
181 Ga0495604_0309657 3300047317 Bacteria 1058
182 Ga0495636_0001504 3300047318 Bacteria 8835
183 Ga0495636_0105910 3300047318 Bacteria 1233
184 Ga0495676_0002064 3300047321 Bacteria 17677
185 Ga0495676_0049557 3300047321 Bacteria 3375
186 Ga0495676_0098676 3300047321 Bacteria 2166
187 Ga0495680_0033780 3300047322 Bacteria 4138
188 Ga0495683_0015364 3300047323 Bacteria 3985
189 Ga0495687_003332 3300047443 Bacteria 11764
190 Ga0495687_017576 3300047443 Bacteria 3561
191 Ga0495687_029877 3300047443 Bacteria 2515
192 Ga0495687_050601 3300047443 Bacteria 1769
193 Ga0495675_0055829 3300047444 Bacteria 2505
194 Ga0495675_0148418 3300047444 Bacteria 1450
195 Ga0495677_0005049 3300047445 Bacteria 5030
196 Ga0495685_000465 3300047447 Bacteria 12651
197 Ga0495685_008588 3300047447 Bacteria 3395
198 Ga0495685_021286 3300047447 Bacteria 2231
199 Ga0495685_076854 3300047447 Bacteria 1114
200 Ga0495681_0001447 3300047470 Bacteria 17791
201 Ga0495681_0033437 3300047470 Bacteria 2575
202 Ga0495686_0038800 3300047472 Bacteria 3045
203 Ga0495593_0061527 3300047673 Bacteria 1963
204 Ga0495593_0081386 3300047673 Bacteria 1674
205 Ga0495614_0047533 3300048089 Bacteria 1840
206 Ga0495614_0067478 3300048089 Bacteria 1539
207 Ga0495626_0001098 3300048091 Bacteria 22879
208 Ga0495626_0011031 3300048091 Bacteria 4794
209 Ga0501070_0473661 3300049586 Bacteria 1008
210 Ga0501044_0045675 3300049823 Bacteria 4538
211 nmdc:mga06z11_1529_c1 3300050494 Bacteria 8580
212 nmdc:mga07m45_267648_c1 3300050496 Bacteria 994
213 Ga0495601_0000140 3300053077 Bacteria 40912
214 Ga0495601_0057833 3300053077 Bacteria 2456
215 Ga0495601_0188745 3300053077 Bacteria 1347
216 Ga0495601_0226817 3300053077 Bacteria 1220
217 Ga0495612_0000916 3300053078 Bacteria 12059
218 Ga0495612_0012523 3300053078 Bacteria 3420
219 Ga0495612_0132127 3300053078 Bacteria 1079
220 Ga0495619_0045181 3300053085 Bacteria 2894
221 Ga0495619_0126683 3300053085 Bacteria 1753
222 Ga0495619_0302288 3300053085 Bacteria 1108
223 Ga0500578_0144643 3300053086 Bacteria 1484
224 Ga0500644_0005255 3300053088 Bacteria 3263
225 Ga0500566_0061982 3300053094 Bacteria 2115
226 Ga0500641_0064343 3300053096 Bacteria 1532
227 Ga0500660_092459 3300053100 Bacteria 1346
228 Ga0500560_004603 3300053107 Bacteria 2954
229 Ga0500560_009858 3300053107 Bacteria 2366
230 Ga0500569_002185 3300053109 Bacteria 3818
231 Ga0500572_032656 3300053111 Bacteria 1463
232 Ga0500614_089274 3300053123 Bacteria 873
233 Ga0500628_003113 3300053129 Bacteria 2730
234 Ga0500561_0001345 3300053137 Bacteria 3991
235 Ga0500573_0037021 3300053140 Bacteria 2818
236 Ga0500573_0171716 3300053140 Bacteria 1172
237 Ga0500579_049164 3300053143 Bacteria 2591
238 Ga0500616_0010520 3300053153 Bacteria 5531
239 Ga0500630_068711 3300053159 Bacteria 1680
240 Ga0500633_0008439 3300053160 Bacteria 2657
241 Ga0500634_0004617 3300053161 Bacteria 6401
242 Ga0500656_000810 3300053732 Bacteria 2488
243 Ga0466962_0058812 3300061719 Bacteria 1834
244 2585306578 2582581313 Bacteria 10042643
245 2616693388 2616644814 Bacteria 11555299
246 2644015440 2643221601 Bacteria 7493239
247 2644177959 2643221631 Bacteria 8168043
248 2644263434 2643221647 Bacteria 10741251
249 2644627612 2643221714 Bacteria 9015452
250 2676477610 2675903058 Bacteria 6822861
251 2785346501 2784746763 Bacteria 9783172
252 2786667749 2786546132 Bacteria 10419719
253 2808917140 2808606375 Bacteria 9466072
254 2812357388 2811994879 Bacteria 9313447
255 2816508319 2816332139 Bacteria 9138787
256 2819744692 2818991472 Bacteria 10089953
257 2827634474 2827628540 Bacteria 6858585
258 2852637511 2852635781 Bacteria 8251373
259 2862287621 2862281513 Bacteria 9621493
260 2862390891 2862382967 Bacteria 10317375
261 2862575618 2862574272 Bacteria 10567477
262 2863408090 2863404153 Bacteria 9672205
263 2867434564 2867428634 Bacteria 9590268
264 2870723283 2870721527 Bacteria 9689237
265 2887486065 2887478801 Bacteria 8972725
266 2912723044 2912715099 Bacteria 9460473
267 2946068475 2946064051 Bacteria 8957905
268 2947230844 2947224130 Bacteria 9938529
269 2954008359 2954002825 Bacteria 9173742
270 2954389154 2954380949 Bacteria 10050426
271 2954673889 2954673503 Bacteria 9685905
272 2954690102 2954682443 Bacteria 9862841
273 2954699906 2954691527 Bacteria 10720516
274 2954702293 2954701450 Bacteria 10834262
275 2954718783 2954711539 Bacteria 10867210
276 2954728753 2954721474 Bacteria 10456478
277 2954733057 2954731030 Bacteria 10243860
278 2954747651 2954740390 Bacteria 10229294
279 2954751938 2954749733 Bacteria 10366972
280 2954766775 2954759201 Bacteria 9358192
281 2990060234 2990059506 Bacteria 9321252
282 8001786585 8001781756 Bacteria 9586736
283 8008560590 8008558824 Bacteria 10610750
284 8025536017 8025530807 Bacteria 8495698
285 8048407247 8048406513 Bacteria 8936924
286 8056059061 8056054917 Bacteria 5736694
287 Ga0207647_10002247
288 JGI25406J46586_10010434
289 rootH1_10002558
290 rootH2_10028913
291 rootL2_10204835
292 rootH1_10012325
293 rootH1_10012326
294 rootH1_10052342
295 Ga0068855_100767051
296 Ga0081539_10001268
297 Ga0075363_100261356
298 Ga0075370_10201808
299 Ga0105243_10578630
300 Ga0105032_101452
301 Ga0157369_10292800
302 Ga0157372_10683465
303 Ga0182008_10000906
304 Ga0182007_10000934
305 Ga0182005_1022183
306 Ga0183367_1012
307 Ga0207426_1005361
308 Ga0207667_10685506
309 Ga0307517_10021148
310 Ga0307515_10000050
311 Ga0307515_10007036
312 Ga0307515_10025932
313 Ga0307515_10350718
314 Ga0307511_10001277
315 Ga0307511_10017538
316 Ga0307512_10003239
317 Ga0307512_10006966
318 Ga0307512_10021185
319 Ga0307513_10000201
320 Ga0307513_10006462
321 Ga0307513_10044669
322 Ga0307513_10045710
323 Ga0307509_10010291
324 Ga0307509_10021330
325 Ga0307508_10022252
326 Ga0307508_10041418
327 Ga0307508_10046567
328 Ga0307508_10313557
329 Ga0307516_10039109
330 Ga0307516_10131165
331 Ga0307516_10133790
332 Ga0307516_10137961
333 Ga0307518_10101192
334 Ga0307518_10124528
335 Ga0307518_10133314
336 Ga0307411_10000275
337 Ga0307507_10060525
338 Ga0307510_10012384
339 Ga0307510_10024181
340 Ga0307510_10049900
341 Ga0307510_10124817
342 Ga0307510_10321777
343 Ga0373948_0010822
344 Ga0373940_0013504
345 Ga0373942_0000149
346 Ga0373962_0000555
347 Ga0373925_0119810
348 Ga0395900_0269170
349 Ga0395905_0575331
350 Ga0395901_0543816
351 Ga0439436_0006190
352 Ga0439436_0015563
353 Ga0439439_0002027
354 Ga0439439_0007042
355 Ga0451853_2361057
356 Ga0439433_0012088
357 Ga0439442_011615
358 Ga0439448_0001209
359 Ga0439448_0107855
360 Ga0439449_0000806
361 Ga0439449_0016105
362 Ga0439457_000060
363 Ga0439457_004702
364 Ga0439457_006740
365 Ga0439462_0001363
366 Ga0439462_0079282
367 Ga0450903_000055
368 Ga0450906_006676
369 Ga0439458_0000060
370 Ga0450908_008109
371 Ga0466969_0043197
372 Ga0466972_0001544
373 Ga0466966_0003426
374 Ga0466966_0112419
375 Ga0466966_0157899
376 Ga0466961_0006091
377 Ga0466964_0109907
378 Ga0466971_0000148
379 Ga0466970_0037667
380 Ga0466960_0252001
381 Ga0466959_0000406
382 Ga0466967_0043199
383 Ga0495627_060533
384 Ga0495592_0012981
385 Ga0495592_0015987
386 Ga0495592_0074186
387 Ga0495592_0229308
388 Ga0495603_0008620
389 Ga0495629_0013980
390 Ga0495629_0124022
391 Ga0495629_0176965
392 Ga0495629_0190019
393 Ga0495638_0021480
394 Ga0495638_0143598
395 Ga0495651_0000044
396 Ga0495651_0024258
397 Ga0495651_0039690
398 Ga0495651_0110527
399 Ga0495664_0002234
400 Ga0495664_0048849
401 Ga0495664_0226904
402 Ga0495584_0118280
403 Ga0495585_0062811
404 Ga0495585_0064308
405 Ga0495594_0167003
406 Ga0495607_0062158
407 Ga0495583_0050273
408 Ga0495606_0001022
409 Ga0495606_0005554
410 Ga0495608_0215174
411 Ga0495618_0006589
412 Ga0495618_0143092
413 Ga0495620_0013785
414 Ga0495620_0059927
415 Ga0495620_0115833
416 Ga0495628_0001427
417 Ga0495628_0206574
418 Ga0495628_0431915
419 Ga0495631_0072459
420 Ga0495631_0074586
421 Ga0495632_0061245
422 Ga0495643_0000962
423 Ga0495648_0021551
424 Ga0495652_0006810
425 Ga0495652_0016635
426 Ga0495652_0083994
427 Ga0495652_0188843
428 Ga0495586_0077181
429 Ga0495587_0003167
430 Ga0495597_0025180
431 Ga0495645_0044763
432 Ga0495645_0122659
433 Ga0495622_0013986
434 Ga0495622_0141581
435 Ga0495633_0038195
436 Ga0495668_0001979
437 Ga0495668_0057811
438 Ga0495668_0169504
439 Ga0495634_0005441
440 Ga0495634_0182366
441 Ga0495611_0002873
442 Ga0495625_0001209
443 Ga0495625_0005852
444 Ga0495625_0022915
445 Ga0495625_0090545
446 Ga0495635_0001576
447 Ga0495635_0021682
448 Ga0495588_0002112
449 Ga0495657_0017598
450 Ga0495657_0109497
451 Ga0495623_0020006
452 Ga0495646_0004913
453 Ga0495646_0023186
454 Ga0495658_0078651
455 Ga0495613_0024967
456 Ga0495613_0129641
457 Ga0495613_0201366
458 Ga0495670_0038856
459 Ga0495671_0020816
460 Ga0495671_0076466
461 Ga0495589_0043634
462 Ga0495600_0012212
463 Ga0495600_0013576
464 Ga0495600_0276635
465 Ga0495604_0004897
466 Ga0495604_0028596
467 Ga0495604_0309657
468 Ga0495636_0001504
469 Ga0495636_0105910
470 Ga0495676_0002064
471 Ga0495676_0049557
472 Ga0495676_0098676
473 Ga0495680_0033780
474 Ga0495683_0015364
475 Ga0495687_003332
476 Ga0495687_017576
477 Ga0495687_029877
478 Ga0495687_050601
479 Ga0495675_0055829
480 Ga0495675_0148418
481 Ga0495677_0005049
482 Ga0495685_000465
483 Ga0495685_008588
484 Ga0495685_021286
485 Ga0495685_076854
486 Ga0495681_0001447
487 Ga0495681_0033437
488 Ga0495686_0038800
489 Ga0495593_0061527
490 Ga0495593_0081386
491 Ga0495614_0047533
492 Ga0495614_0067478
493 Ga0495626_0001098
494 Ga0495626_0011031
495 Ga0501070_0473661
496 Ga0501044_0045675
497 nmdc:mga06z11_1529_c1
498 nmdc:mga07m45_267648_c1
499 Ga0495601_0000140
500 Ga0495601_0057833
501 Ga0495601_0188745
502 Ga0495601_0226817
503 Ga0495612_0000916
504 Ga0495612_0012523
505 Ga0495612_0132127
506 Ga0495619_0045181
507 Ga0495619_0126683
508 Ga0495619_0302288
509 Ga0500578_0144643
510 Ga0500644_0005255
511 Ga0500566_0061982
512 Ga0500641_0064343
513 Ga0500660_092459
514 Ga0500560_004603
515 Ga0500560_009858
516 Ga0500569_002185
517 Ga0500572_032656
518 Ga0500614_089274
519 Ga0500628_003113
520 Ga0500561_0001345
521 Ga0500573_0037021
522 Ga0500573_0171716
523 Ga0500579_049164
524 Ga0500616_0010520
525 Ga0500630_068711
526 Ga0500633_0008439
527 Ga0500634_0004617
528 Ga0500656_000810
529 Ga0466962_0058812
530 2585306578
531 2616693388
532 2644015440
533 2644177959
534 2644263434
535 2644627612
536 2676477610
537 2785346501
538 2786667749
539 2808917140
540 2812357388
541 2816508319
542 2819744692
543 2827634474
544 2852637511
545 2862287621
546 2862390891
547 2862575618
548 2863408090
549 2867434564
550 2870723283
551 2887486065
552 2912723044
553 2946068475
554 2947230844
555 2954008359
556 2954389154
557 2954673889
558 2954690102
559 2954699906
560 2954702293
561 2954718783
562 2954728753
563 2954733057
564 2954747651
565 2954751938
566 2954766775
567 2990060234
568 8001786585
569 8008560590
570 8025536017
571 8048407247
572 8056059061

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

162

241

0.98

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

149

190

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9589 174 278
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9476 182 266
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9385 182 276
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9381 179 278
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9243 182 266
ID Description Score Start End Superfamily
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9624 229 277 1.10.10.60
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9527 178 232 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9456 229 279 1.10.10.60
af_P06134_78_136_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9434 178 226 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9408 232 276 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A2W4NK05-F1-model_v4 deleted 0.9642 178 282
AF-A0A484XH48-F1-model_v4 AraC family transcriptional regulator 0.9608 178 280 GO:0003700
GO:0043565
AF-G9A9Q3-F1-model_v4 HTH-type transcriptional regulator AraC family 0.9541 177 279 GO:0003700
GO:0043565
AF-A0A7C6P112-F1-model_v4 Stage 0 sporulation protein A homolog 0.9527 175 279 GO:0000160
GO:0003700
GO:0043565
AF-A0A258V5V2-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9515 175 281 GO:0003700
GO:0043565

Map