F387363

General Info

Members Datasets Scaffolds Average Seq Length
286 177 572 349

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100107347|Ga0075431_1001073473
Length 379
Sequence MGLPCVGMPSTSASSPAPQPELLEAARGGDEQAFGRLVEPHRRELHAHCYRMLGSVHDAEDAFQDAMLRAWRGLSRLEDAGSLRAWLYKIATNTCLDAIARRPKRVIPVDYGPAADPHDGPAQQPVVESVWVEPYPDERLGLEDGYAAPEARYEQREAVELAFVAALQHLPPNQRAALILREVLGYSANEAAEALDTTTASINSALQRARKLVDERLPEESQQATLRTLGDERLAEIVQSYMDAMDHDDVDGVVAMLAEDASWSMPPLASWFKGIDALSEFLARGPLSRRFRWRRIATRANGQPAVAAYTWHEEEQAYLPFALDVIAFEGAQIHDVVSFIARGTENLDVEKLERYPDEPPDPEMVERIFVGFGLPTRLT

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
86 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
87 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
88 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
108 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
116 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.9
Nodule 0
Rhizoplane 13.29
Rhizosphere 81.12
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100107347 3300006847 Bacteria 2881
2 Ga0070683_100125579 3300005329 Bacteria 2425
3 Ga0068869_100114030 3300005334 Bacteria 2060
4 Ga0070682_100131611 3300005337 Bacteria 1694
5 Ga0068868_100015592 3300005338 Bacteria 5625
6 Ga0070660_100001712 3300005339 Bacteria 15036
7 Ga0070692_10057832 3300005345 Bacteria 2035
8 Ga0070668_100108416 3300005347 Bacteria 2209
9 Ga0070669_100093701 3300005353 Bacteria 2256
10 Ga0070675_100202059 3300005354 Bacteria 1725
11 Ga0070674_100301893 3300005356 Bacteria 1277
12 Ga0070667_100003852 3300005367 Bacteria 12742
13 Ga0070714_100054101 3300005435 Bacteria 3428
14 Ga0070713_100052600 3300005436 Bacteria 3372
15 Ga0070711_100065745 3300005439 Bacteria 2538
16 Ga0070700_100028806 3300005441 Bacteria 3307
17 Ga0070700_100112355 3300005441 Bacteria 1813
18 Ga0070678_100384364 3300005456 Bacteria 1215
19 Ga0070662_100134767 3300005457 Bacteria 1908
20 Ga0068855_100003269 3300005563 Bacteria 19833
21 Ga0070664_100093567 3300005564 Bacteria 2604
22 Ga0068856_100191916 3300005614 Bacteria 2056
23 Ga0070702_100001903 3300005615 Bacteria 8757
24 Ga0068870_10030888 3300005840 Bacteria 2711
25 Ga0068860_100000935 3300005843 Bacteria 32328
26 Ga0081538_10000258 3300005981 Bacteria 60142
27 Ga0081538_10001950 3300005981 Bacteria 20667
28 Ga0081538_10003189 3300005981 Bacteria 15573
29 Ga0081538_10021297 3300005981 Bacteria 4737
30 Ga0081538_10028811 3300005981 Bacteria 3809
31 Ga0081538_10053767 3300005981 Bacteria 2390
32 Ga0070717_10030885 3300006028 Bacteria 4305
33 Ga0070717_10203418 3300006028 Bacteria 1735
34 Ga0075365_10044457 3300006038 Bacteria 2910
35 Ga0075365_10211874 3300006038 Bacteria 1358
36 Ga0075363_100000246 3300006048 Bacteria 15286
37 Ga0075363_100004902 3300006048 Bacteria 5916
38 Ga0075363_100169560 3300006048 Bacteria 1239
39 Ga0070712_100024016 3300006175 Bacteria 4033
40 Ga0075362_10053204 3300006177 Bacteria 1817
41 Ga0075367_10005707 3300006178 Bacteria 6217
42 Ga0075428_100058940 3300006844 Bacteria 4205
43 Ga0075428_100173421 3300006844 Bacteria 2337
44 Ga0075428_100194423 3300006844 Bacteria 2194
45 Ga0075430_100002367 3300006846 Bacteria 15665
46 Ga0075430_100002619 3300006846 Bacteria 15035
47 Ga0075430_100074733 3300006846 Bacteria 2841
48 Ga0075430_100260095 3300006846 Bacteria 1437
49 Ga0075431_100007913 3300006847 Bacteria 10593
50 Ga0075431_100023074 3300006847 Bacteria 6362
51 Ga0075431_100059952 3300006847 Bacteria 3927
52 Ga0075431_100074885 3300006847 Bacteria 3493
53 Ga0075433_10001917 3300006852 Bacteria 15644
54 Ga0075433_10074177 3300006852 Bacteria 2994
55 Ga0075434_100000531 3300006871 Bacteria 29081
56 Ga0075434_100027866 3300006871 Bacteria 5546
57 Ga0075434_100080792 3300006871 Bacteria 3248
58 Ga0075429_100042676 3300006880 Bacteria 3946
59 Ga0075429_100068624 3300006880 Bacteria 3086
60 Ga0075429_100153470 3300006880 Bacteria 2016
61 Ga0068865_100108221 3300006881 Bacteria 2046
62 Ga0075435_100000473 3300007076 Bacteria 24417
63 Ga0075435_100068142 3300007076 Bacteria 2898
64 Ga0111539_10156700 3300009094 Bacteria 2665
65 Ga0105245_10000665 3300009098 Bacteria 31126
66 Ga0105245_10052285 3300009098 Bacteria 3664
67 Ga0105245_10185563 3300009098 Bacteria 1990
68 Ga0105247_10132116 3300009101 Bacteria 1628
69 Ga0114129_10029771 3300009147 Bacteria 7731
70 Ga0114129_10030363 3300009147 Bacteria 7648
71 Ga0114129_10045040 3300009147 Bacteria 6203
72 Ga0114129_10082292 3300009147 Bacteria 4473
73 Ga0105243_10269676 3300009148 Bacteria 1527
74 Ga0105242_10275154 3300009176 Bacteria 1527
75 Ga0105237_10217227 3300009545 Bacteria 1912
76 Ga0105238_10008965 3300009551 Bacteria 10011
77 Ga0105249_10106457 3300009553 Bacteria 2646
78 Ga0105239_10082554 3300010375 Bacteria 3539
79 Ga0105239_10097163 3300010375 Bacteria 3255
80 Ga0105239_10436326 3300010375 Bacteria 1485
81 Ga0105246_10026406 3300011119 Bacteria 3793
82 Ga0157374_10002739 3300013296 Bacteria 14799
83 Ga0163162_10122110 3300013306 Bacteria 2710
84 Ga0163162_10179512 3300013306 Bacteria 2243
85 Ga0157372_10216783 3300013307 Bacteria 2218
86 Ga0157375_10238689 3300013308 Bacteria 1977
87 Ga0157380_10208382 3300014326 Bacteria 1740
88 Ga0157379_10084557 3300014968 Bacteria 2843
89 Ga0207688_10002499 3300025901 Bacteria 9902
90 Ga0207688_10056783 3300025901 Bacteria 2200
91 Ga0207647_10092372 3300025904 Bacteria 1804
92 Ga0207643_10008884 3300025908 Bacteria 5394
93 Ga0207693_10013342 3300025915 Bacteria 6624
94 Ga0207693_10014588 3300025915 Bacteria 6314
95 Ga0207663_10073080 3300025916 Bacteria 2218
96 Ga0207662_10031847 3300025918 Bacteria 3065
97 Ga0207657_10000487 3300025919 Bacteria 41908
98 Ga0207657_10010788 3300025919 Bacteria 9096
99 Ga0207657_10063059 3300025919 Bacteria 3171
100 Ga0207681_10038918 3300025923 Bacteria 3154
101 Ga0207681_10248169 3300025923 Bacteria 1389
102 Ga0207687_10000138 3300025927 Bacteria 48809
103 Ga0207687_10019981 3300025927 Bacteria 4442
104 Ga0207687_10328213 3300025927 Bacteria 1240
105 Ga0207700_10003952 3300025928 Bacteria 8670
106 Ga0207700_10401563 3300025928 Bacteria 1201
107 Ga0207664_10142396 3300025929 Bacteria 2030
108 Ga0207690_10174881 3300025932 Bacteria 1611
109 Ga0207706_10047733 3300025933 Bacteria 3788
110 Ga0207667_10006618 3300025949 Bacteria 14009
111 Ga0207640_10050103 3300025981 Bacteria 2707
112 Ga0207640_10079357 3300025981 Bacteria 2237
113 Ga0207640_10252511 3300025981 Bacteria 1370
114 Ga0207658_10008168 3300025986 Bacteria 7127
115 Ga0207677_10001777 3300026023 Bacteria 11380
116 Ga0207677_10085436 3300026023 Bacteria 2277
117 Ga0207708_10025241 3300026075 Bacteria 4495
118 Ga0207708_10025879 3300026075 Bacteria 4439
119 Ga0207641_10270737 3300026088 Bacteria 1594
120 Ga0207648_10108536 3300026089 Bacteria 2436
121 Ga0207675_100526816 3300026118 Bacteria 1179
122 Ga0207683_10366475 3300026121 Bacteria 1323
123 Ga0207698_10280670 3300026142 Bacteria 1540
124 Ga0209813_10004383 3300027866 Bacteria 3371
125 Ga0268264_10000374 3300028381 Bacteria 65781
126 Ga0307409_100027813 3300031995 Bacteria 4016
127 Ga0307416_100022677 3300032002 Bacteria 4537
128 Ga0307416_100312123 3300032002 Bacteria 1570
129 Ga0373934_0054456 3300035086 Bacteria 1588
130 Ga0373944_0007754 3300035089 Bacteria 2883
131 Ga0373954_0014366 3300035118 Bacteria 3531
132 Ga0373956_0045356 3300035119 Bacteria 1961
133 Ga0373943_0003852 3300035170 Bacteria 6822
134 Ga0373946_0035999 3300035171 Bacteria 2005
135 Ga0373955_0041078 3300035172 Bacteria 2477
136 Ga0373924_0008034 3300035410 Bacteria 3819
137 Ga0373935_0020312 3300035692 Bacteria 4056
138 Ga0373947_0046972 3300035725 Bacteria 2586
139 Ga0373925_0163079 3300037068 Bacteria 1756
140 Ga0395900_0193490 3300037418 Bacteria 2062
141 Ga0395900_0243434 3300037418 Bacteria 1803
142 Ga0395898_0048787 3300037466 Bacteria 4150
143 Ga0395898_0266966 3300037466 Unclassified 1632
144 Ga0395905_0106592 3300037471 Bacteria 2631
145 Ga0395901_0009441 3300038443 Bacteria 9898
146 Ga0395901_0030215 3300038443 Bacteria 5582
147 Ga0395901_0074982 3300038443 Bacteria 3529
148 Ga0466966_0052867 3300044684 Bacteria 2579
149 Ga0466961_0009779 3300044693 Bacteria 6104
150 Ga0466963_0074359 3300044694 Bacteria 2291
151 Ga0466959_0005160 3300045049 Bacteria 8899
152 Ga0466959_0184979 3300045049 Bacteria 1456
153 Ga0466967_0108223 3300045976 Bacteria 2550
154 Ga0466967_0185769 3300045976 Bacteria 1963
155 Ga0495629_0007380 3300046459 Bacteria 8105
156 Ga0495641_0081097 3300046461 Bacteria 1453
157 Ga0495651_0172046 3300046462 Bacteria 1541
158 Ga0495653_0011373 3300046463 Bacteria 7272
159 Ga0495653_0082921 3300046463 Bacteria 2365
160 Ga0495582_0015977 3300046473 Bacteria 4115
161 Ga0495639_0004628 3300046475 Bacteria 5904
162 Ga0495662_0000608 3300046476 Bacteria 16568
163 Ga0495664_0013779 3300046477 Bacteria 4583
164 Ga0495608_0077730 3300046511 Bacteria 2160
165 Ga0495608_0211344 3300046511 Bacteria 1219
166 Ga0495618_0021313 3300046514 Bacteria 3994
167 Ga0495618_0054525 3300046514 Bacteria 2530
168 Ga0495630_0082313 3300046517 Bacteria 2429
169 Ga0495630_0178937 3300046517 Bacteria 1617
170 Ga0495652_0024292 3300046529 Bacteria 5366
171 Ga0495652_0045874 3300046529 Bacteria 3754
172 Ga0495665_0006471 3300046531 Bacteria 6327
173 Ga0495665_0095859 3300046531 Bacteria 1558
174 Ga0495640_0005209 3300046533 Bacteria 10333
175 Ga0495586_0035765 3300046535 Bacteria 2668
176 Ga0495586_0081573 3300046535 Bacteria 1777
177 Ga0495587_0026932 3300046536 Bacteria 3501
178 Ga0495645_0051415 3300046543 Bacteria 2998
179 Ga0495634_0002813 3300046642 Bacteria 14298
180 Ga0495635_0017036 3300046663 Bacteria 5075
181 Ga0495635_0050986 3300046663 Bacteria 2852
182 Ga0495657_0001586 3300046675 Bacteria 19540
183 Ga0495657_0297798 3300046675 Bacteria 962
184 Ga0495623_0055753 3300046679 Bacteria 2490
185 Ga0495623_0108618 3300046679 Bacteria 1684
186 Ga0495646_0064139 3300046680 Bacteria 2178
187 Ga0495647_0053438 3300046681 Bacteria 1575
188 Ga0495658_0052847 3300046683 Bacteria 2305
189 Ga0495613_0064495 3300046689 Bacteria 2678
190 Ga0495624_0002913 3300046690 Bacteria 12792
191 Ga0495624_0087303 3300046690 Bacteria 1926
192 Ga0495589_0112765 3300046794 Bacteria 1312
193 Ga0495581_0008134 3300047315 Bacteria 6074
194 Ga0495581_0026603 3300047315 Bacteria 3353
195 Ga0495674_0027441 3300047319 Bacteria 5204
196 Ga0495674_0052566 3300047319 Bacteria 3584
197 Ga0495676_0046913 3300047321 Bacteria 3501
198 Ga0495676_0147111 3300047321 Bacteria 1681
199 Ga0495680_0031878 3300047322 Bacteria 4284
200 Ga0495675_0010748 3300047444 Bacteria 5732
201 Ga0495675_0110735 3300047444 Bacteria 1714
202 Ga0495684_0001726 3300047471 Bacteria 17588
203 Ga0495602_0115000 3300048088 Bacteria 2177
204 Ga0496100_0007788 3300048903 Bacteria 5939
205 Ga0496101_0006710 3300048904 Bacteria 7422
206 Ga0496101_0051240 3300048904 Bacteria 2974
207 Ga0496101_0078703 3300048904 Bacteria 2433
208 Ga0496101_0079347 3300048904 Bacteria 2423
209 Ga0496102_0002474 3300048905 Bacteria 15769
210 Ga0496102_0012725 3300048905 Bacteria 7288
211 Ga0496103_0005915 3300048906 Bacteria 7312
212 Ga0496104_0005490 3300048907 Bacteria 11106
213 Ga0496104_0008997 3300048907 Bacteria 8881
214 Ga0496105_0010912 3300048908 Bacteria 7157
215 Ga0496105_0014792 3300048908 Bacteria 6212
216 Ga0496105_0160630 3300048908 Bacteria 1845
217 Ga0496106_0001965 3300048909 Bacteria 15454
218 Ga0496106_0313186 3300048909 Bacteria 1259
219 Ga0496107_0000334 3300048910 Bacteria 25483
220 Ga0496108_0000291 3300048911 Bacteria 43199
221 Ga0496108_0001406 3300048911 Bacteria 18961
222 Ga0496108_0157382 3300048911 Bacteria 1962
223 Ga0496109_0000387 3300048912 Bacteria 39967
224 Ga0496109_0002610 3300048912 Bacteria 15109
225 Ga0496109_0114719 3300048912 Bacteria 2506
226 Ga0496109_0522057 3300048912 Bacteria 1121
227 Ga0496110_0000510 3300048913 Bacteria 26372
228 Ga0496110_0004662 3300048913 Bacteria 10657
229 Ga0496110_0108754 3300048913 Bacteria 2489
230 Ga0496111_0000517 3300048914 Bacteria 19933
231 Ga0496111_0008118 3300048914 Bacteria 6934
232 Ga0496111_0350593 3300048914 Bacteria 1093
233 Ga0496112_0007065 3300048915 Bacteria 9919
234 Ga0496112_0021349 3300048915 Bacteria 6157
235 Ga0496112_0203921 3300048915 Bacteria 1936
236 Ga0496113_0000190 3300048916 Bacteria 27916
237 Ga0496113_0000405 3300048916 Bacteria 20840
238 Ga0496114_0035480 3300048917 Bacteria 4118
239 Ga0496114_0252104 3300048917 Bacteria 1553
240 Ga0496114_0313145 3300048917 Bacteria 1386
241 Ga0496115_0055658 3300048918 Bacteria 3177
242 Ga0496119_0018787 3300048922 Bacteria 5125
243 Ga0496120_0051058 3300048923 Bacteria 2364
244 Ga0501042_0072360 3300049578 Bacteria 2467
245 Ga0501074_0126590 3300049590 Bacteria 1828
246 Ga0501075_0050873 3300049591 Bacteria 3115
247 Ga0501075_0050970 3300049591 Bacteria 3112
248 Ga0501076_0310370 3300049592 Bacteria 1293
249 Ga0501081_0238683 3300049743 Bacteria 1325
250 Ga0501045_0059543 3300049824 Bacteria 2798
251 Ga0501045_0201165 3300049824 Bacteria 1484
252 nmdc:mga03n38_53744_c1 3300050490 Bacteria 1808
253 nmdc:mga03n38_8089_c1 3300050490 Bacteria 3754
254 nmdc:mga00v17_5661_c1 3300050491 Bacteria 6594
255 nmdc:mga0yw44_133546_c1 3300050492 Bacteria 1608
256 nmdc:mga0yw44_78698_c1 3300050492 Bacteria 2062
257 nmdc:mga06z11_173744_c1 3300050494 Bacteria 1239
258 nmdc:mga05p37_418470_c1 3300050507 Bacteria 1560
259 nmdc:mga05p37_46238_c1 3300050507 Bacteria 5352
260 nmdc:mga05p37_75529_c1 3300050507 Bacteria 4148
261 nmdc:mga05p37_90316_c1 3300050507 Bacteria 3775
262 nmdc:mga09592_167631_c1 3300050508 Bacteria 1899
263 nmdc:mga09592_191958_c1 3300050508 Bacteria 1768
264 nmdc:mga09592_21819_c1 3300050508 Bacteria 5280
265 nmdc:mga0qj67_4909_c1 3300050509 Bacteria 9728
266 nmdc:mga0qj67_5811_c1 3300050509 Bacteria 9028
267 nmdc:mga0qj67_6768_c1 3300050509 Bacteria 8427
268 nmdc:mga06r32_20441_c1 3300050510 Bacteria 6097
269 nmdc:mga06r32_302975_c1 3300050510 Bacteria 1584
270 nmdc:mga06r32_81356_c1 3300050510 Bacteria 3154
271 nmdc:mga06r32_8977_c1 3300050510 Bacteria 9005
272 nmdc:mga08y16_390020_c1 3300050511 Bacteria 1427
273 nmdc:mga0n895_103353_c1 3300050512 Bacteria 2861
274 nmdc:mga0n895_116901_c1 3300050512 Bacteria 2686
275 nmdc:mga0n895_5084_c1 3300050512 Bacteria 10924
276 nmdc:mga0rr50_155813_c1 3300050513 Bacteria 1850
277 nmdc:mga0rr50_329_c1 3300050513 Bacteria 25831
278 nmdc:mga0rr50_80675_c1 3300050513 Bacteria 2509
279 nmdc:mga0a205_32357_c1 3300050515 Bacteria 5015
280 nmdc:mga0a205_98346_c1 3300050515 Bacteria 2825
281 Ga0495601_0004490 3300053077 Bacteria 8063
282 Ga0495595_0041192 3300053084 Bacteria 2112
283 Ga0495595_0076702 3300053084 Bacteria 1587
284 Ga0501084_0232714 3300054114 Bacteria 1555
285 Ga0590077_007829 3300059426 Bacteria 2183
286 Ga0530510_0135041 3300061734 Bacteria 1816
287 Ga0075431_100107347
288 Ga0070683_100125579
289 Ga0068869_100114030
290 Ga0070682_100131611
291 Ga0068868_100015592
292 Ga0070660_100001712
293 Ga0070692_10057832
294 Ga0070668_100108416
295 Ga0070669_100093701
296 Ga0070675_100202059
297 Ga0070674_100301893
298 Ga0070667_100003852
299 Ga0070714_100054101
300 Ga0070713_100052600
301 Ga0070711_100065745
302 Ga0070700_100028806
303 Ga0070700_100112355
304 Ga0070678_100384364
305 Ga0070662_100134767
306 Ga0068855_100003269
307 Ga0070664_100093567
308 Ga0068856_100191916
309 Ga0070702_100001903
310 Ga0068870_10030888
311 Ga0068860_100000935
312 Ga0081538_10000258
313 Ga0081538_10001950
314 Ga0081538_10003189
315 Ga0081538_10021297
316 Ga0081538_10028811
317 Ga0081538_10053767
318 Ga0070717_10030885
319 Ga0070717_10203418
320 Ga0075365_10044457
321 Ga0075365_10211874
322 Ga0075363_100000246
323 Ga0075363_100004902
324 Ga0075363_100169560
325 Ga0070712_100024016
326 Ga0075362_10053204
327 Ga0075367_10005707
328 Ga0075428_100058940
329 Ga0075428_100173421
330 Ga0075428_100194423
331 Ga0075430_100002367
332 Ga0075430_100002619
333 Ga0075430_100074733
334 Ga0075430_100260095
335 Ga0075431_100007913
336 Ga0075431_100023074
337 Ga0075431_100059952
338 Ga0075431_100074885
339 Ga0075433_10001917
340 Ga0075433_10074177
341 Ga0075434_100000531
342 Ga0075434_100027866
343 Ga0075434_100080792
344 Ga0075429_100042676
345 Ga0075429_100068624
346 Ga0075429_100153470
347 Ga0068865_100108221
348 Ga0075435_100000473
349 Ga0075435_100068142
350 Ga0111539_10156700
351 Ga0105245_10000665
352 Ga0105245_10052285
353 Ga0105245_10185563
354 Ga0105247_10132116
355 Ga0114129_10029771
356 Ga0114129_10030363
357 Ga0114129_10045040
358 Ga0114129_10082292
359 Ga0105243_10269676
360 Ga0105242_10275154
361 Ga0105237_10217227
362 Ga0105238_10008965
363 Ga0105249_10106457
364 Ga0105239_10082554
365 Ga0105239_10097163
366 Ga0105239_10436326
367 Ga0105246_10026406
368 Ga0157374_10002739
369 Ga0163162_10122110
370 Ga0163162_10179512
371 Ga0157372_10216783
372 Ga0157375_10238689
373 Ga0157380_10208382
374 Ga0157379_10084557
375 Ga0207688_10002499
376 Ga0207688_10056783
377 Ga0207647_10092372
378 Ga0207643_10008884
379 Ga0207693_10013342
380 Ga0207693_10014588
381 Ga0207663_10073080
382 Ga0207662_10031847
383 Ga0207657_10000487
384 Ga0207657_10010788
385 Ga0207657_10063059
386 Ga0207681_10038918
387 Ga0207681_10248169
388 Ga0207687_10000138
389 Ga0207687_10019981
390 Ga0207687_10328213
391 Ga0207700_10003952
392 Ga0207700_10401563
393 Ga0207664_10142396
394 Ga0207690_10174881
395 Ga0207706_10047733
396 Ga0207667_10006618
397 Ga0207640_10050103
398 Ga0207640_10079357
399 Ga0207640_10252511
400 Ga0207658_10008168
401 Ga0207677_10001777
402 Ga0207677_10085436
403 Ga0207708_10025241
404 Ga0207708_10025879
405 Ga0207641_10270737
406 Ga0207648_10108536
407 Ga0207675_100526816
408 Ga0207683_10366475
409 Ga0207698_10280670
410 Ga0209813_10004383
411 Ga0268264_10000374
412 Ga0307409_100027813
413 Ga0307416_100022677
414 Ga0307416_100312123
415 Ga0373934_0054456
416 Ga0373944_0007754
417 Ga0373954_0014366
418 Ga0373956_0045356
419 Ga0373943_0003852
420 Ga0373946_0035999
421 Ga0373955_0041078
422 Ga0373924_0008034
423 Ga0373935_0020312
424 Ga0373947_0046972
425 Ga0373925_0163079
426 Ga0395900_0193490
427 Ga0395900_0243434
428 Ga0395898_0048787
429 Ga0395898_0266966
430 Ga0395905_0106592
431 Ga0395901_0009441
432 Ga0395901_0030215
433 Ga0395901_0074982
434 Ga0466966_0052867
435 Ga0466961_0009779
436 Ga0466963_0074359
437 Ga0466959_0005160
438 Ga0466959_0184979
439 Ga0466967_0108223
440 Ga0466967_0185769
441 Ga0495629_0007380
442 Ga0495641_0081097
443 Ga0495651_0172046
444 Ga0495653_0011373
445 Ga0495653_0082921
446 Ga0495582_0015977
447 Ga0495639_0004628
448 Ga0495662_0000608
449 Ga0495664_0013779
450 Ga0495608_0077730
451 Ga0495608_0211344
452 Ga0495618_0021313
453 Ga0495618_0054525
454 Ga0495630_0082313
455 Ga0495630_0178937
456 Ga0495652_0024292
457 Ga0495652_0045874
458 Ga0495665_0006471
459 Ga0495665_0095859
460 Ga0495640_0005209
461 Ga0495586_0035765
462 Ga0495586_0081573
463 Ga0495587_0026932
464 Ga0495645_0051415
465 Ga0495634_0002813
466 Ga0495635_0017036
467 Ga0495635_0050986
468 Ga0495657_0001586
469 Ga0495657_0297798
470 Ga0495623_0055753
471 Ga0495623_0108618
472 Ga0495646_0064139
473 Ga0495647_0053438
474 Ga0495658_0052847
475 Ga0495613_0064495
476 Ga0495624_0002913
477 Ga0495624_0087303
478 Ga0495589_0112765
479 Ga0495581_0008134
480 Ga0495581_0026603
481 Ga0495674_0027441
482 Ga0495674_0052566
483 Ga0495676_0046913
484 Ga0495676_0147111
485 Ga0495680_0031878
486 Ga0495675_0010748
487 Ga0495675_0110735
488 Ga0495684_0001726
489 Ga0495602_0115000
490 Ga0496100_0007788
491 Ga0496101_0006710
492 Ga0496101_0051240
493 Ga0496101_0078703
494 Ga0496101_0079347
495 Ga0496102_0002474
496 Ga0496102_0012725
497 Ga0496103_0005915
498 Ga0496104_0005490
499 Ga0496104_0008997
500 Ga0496105_0010912
501 Ga0496105_0014792
502 Ga0496105_0160630
503 Ga0496106_0001965
504 Ga0496106_0313186
505 Ga0496107_0000334
506 Ga0496108_0000291
507 Ga0496108_0001406
508 Ga0496108_0157382
509 Ga0496109_0000387
510 Ga0496109_0002610
511 Ga0496109_0114719
512 Ga0496109_0522057
513 Ga0496110_0000510
514 Ga0496110_0004662
515 Ga0496110_0108754
516 Ga0496111_0000517
517 Ga0496111_0008118
518 Ga0496111_0350593
519 Ga0496112_0007065
520 Ga0496112_0021349
521 Ga0496112_0203921
522 Ga0496113_0000190
523 Ga0496113_0000405
524 Ga0496114_0035480
525 Ga0496114_0252104
526 Ga0496114_0313145
527 Ga0496115_0055658
528 Ga0496119_0018787
529 Ga0496120_0051058
530 Ga0501042_0072360
531 Ga0501074_0126590
532 Ga0501075_0050873
533 Ga0501075_0050970
534 Ga0501076_0310370
535 Ga0501081_0238683
536 Ga0501045_0059543
537 Ga0501045_0201165
538 nmdc:mga03n38_53744_c1
539 nmdc:mga03n38_8089_c1
540 nmdc:mga00v17_5661_c1
541 nmdc:mga0yw44_133546_c1
542 nmdc:mga0yw44_78698_c1
543 nmdc:mga06z11_173744_c1
544 nmdc:mga05p37_418470_c1
545 nmdc:mga05p37_46238_c1
546 nmdc:mga05p37_75529_c1
547 nmdc:mga05p37_90316_c1
548 nmdc:mga09592_167631_c1
549 nmdc:mga09592_191958_c1
550 nmdc:mga09592_21819_c1
551 nmdc:mga0qj67_4909_c1
552 nmdc:mga0qj67_5811_c1
553 nmdc:mga0qj67_6768_c1
554 nmdc:mga06r32_20441_c1
555 nmdc:mga06r32_302975_c1
556 nmdc:mga06r32_81356_c1
557 nmdc:mga06r32_8977_c1
558 nmdc:mga08y16_390020_c1
559 nmdc:mga0n895_103353_c1
560 nmdc:mga0n895_116901_c1
561 nmdc:mga0n895_5084_c1
562 nmdc:mga0rr50_155813_c1
563 nmdc:mga0rr50_329_c1
564 nmdc:mga0rr50_80675_c1
565 nmdc:mga0a205_32357_c1
566 nmdc:mga0a205_98346_c1
567 Ga0495601_0004490
568 Ga0495595_0041192
569 Ga0495595_0076702
570 Ga0501084_0232714
571 Ga0590077_007829
572 Ga0530510_0135041

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04542

Sigma70_r2

Sigma-70 region 2

37

105

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

160

213

0.95

PF02136

NTF2

Nuclear transport factor 2 (NTF2) domain

234

312

0.86

PF12680

SnoaL_2

SnoaL-like domain

238

338

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lup-assembly2.cif.gz_C crystal structure of the complex formed by region of e. coli sigmae bound to its -10 element non template strand 0.9465 7 88
6jhe-assembly1.cif.gz_A crystal structure of bacillus subtilis sigw domain 4 in complexed with -35 element dna 0.9264 158 207
5or5-assembly1.cif.gz_A nmr structure of the complex formed by an engineered region 2 of sigmae in complex with gtaaaa 0.9224 7 90
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.8971 148 205
2o8x-assembly1.cif.gz_A "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.8923 147 201
ID Description Score Start End Superfamily
4lupA00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9469 7 88 1.10.1740.10
4lupC00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9466 7 88 1.10.1740.10
4go1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9428 160 199 1.10.10.10
2mapA00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9378 8 88 1.10.1740.10
af_P9WGH7_10_94_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9255 7 88 1.10.1740.10
ID Description Score Start End GO Terms
AF-A0A4Q3W7Y0-F1-model_v4 RNA polymerase sigma factor 0.9697 7 89 GO:0006352
GO:0016987
AF-M3HVJ7-F1-model_v4 RNA polymerase sigma factor 0.9605 6 89 GO:0003677
GO:0006352
GO:0016987
AF-A0A7V8WAV7-F1-model_v4 RNA polymerase subunit sigma-70 (EC 2.7.7.6) 0.9389 96 341 GO:0001054
GO:0001055
GO:0001056
GO:0001057
GO:0001058
GO:0001066
GO:0003677
GO:0006352
GO:0016987
AF-A0A4R4Y9P0-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.9361 7 341 GO:0003677
GO:0006352
GO:0016987
AF-A0A2V9U1D4-F1-model_v4 RNA polymerase subunit sigma-24 0.9352 7 95 GO:0006352
GO:0016987

Map