F387354

General Info

Members Datasets Scaffolds Average Seq Length
286 139 572 267

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100000006|Ga0075428_10000000695
Length 266
Sequence VAELAAIYVRLVGARIRGDLQYRTSFVLFITSQFLVAFLDFLAIAIIFSHVPRLAGWSLAEVMFLYGATNVSFNLADVFISPVETLPGRVRMGTFDALLTRPLGPLFQLATEEFALRRVGKLIQGVVILVLAITRLHVEWTAARVGLTAVMLIAGAVIFSAIWIATAALNIFTVETTQFGNAFTYGGNFLSQYPIDVYGVWLRRVFAYLLPIAFVNYFPALYILGRESSLGVLALRFASPFVALATALVAAAIWRFAIRHYRSTGS

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
77 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
98 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
99 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.25
Metatranscriptomes 1.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.34
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 2.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100000006 3300006844 Bacteria 288592
2 rootH1_10077860 3300003316 Bacteria 1461
3 Ga0070658_10006633 3300005327 Bacteria 9378
4 Ga0070658_10020633 3300005327 Bacteria 5280
5 Ga0070658_10442985 3300005327 Bacteria 1119
6 Ga0070683_100005078 3300005329 Bacteria 10933
7 Ga0070683_100500322 3300005329 Bacteria 1161
8 Ga0070680_100031686 3300005336 Bacteria 4251
9 Ga0070680_100145123 3300005336 Bacteria 1991
10 Ga0070660_100002000 3300005339 Bacteria 14055
11 Ga0070660_100005317 3300005339 Bacteria 8909
12 Ga0070660_100011560 3300005339 Bacteria 6282
13 Ga0070660_100041171 3300005339 Bacteria 3521
14 Ga0070660_100094015 3300005339 Bacteria 2368
15 Ga0070660_100159048 3300005339 Bacteria 1819
16 Ga0070661_100066117 3300005344 Bacteria 2656
17 Ga0070661_100164494 3300005344 Archaea 1682
18 Ga0070661_100176241 3300005344 Bacteria 1625
19 Ga0070671_100104869 3300005355 Bacteria 2373
20 Ga0070659_100033293 3300005366 Bacteria 4002
21 Ga0070659_100100440 3300005366 Bacteria 2328
22 Ga0070659_100177156 3300005366 Bacteria 1748
23 Ga0070714_100109416 3300005435 Bacteria 2445
24 Ga0070714_100641518 3300005435 Bacteria 1022
25 Ga0070713_100071945 3300005436 Bacteria 2924
26 Ga0070713_100280764 3300005436 Bacteria 1528
27 Ga0070711_100280086 3300005439 Unclassified 1319
28 Ga0070708_100182385 3300005445 Bacteria 1962
29 Ga0070678_100220178 3300005456 Bacteria 1577
30 Ga0070681_10007238 3300005458 Bacteria 10828
31 Ga0070681_10011759 3300005458 Bacteria 8674
32 Ga0070681_10013600 3300005458 Bacteria 8098
33 Ga0070681_10051198 3300005458 Bacteria 4119
34 Ga0070681_10102603 3300005458 Bacteria 2805
35 Ga0070681_10222745 3300005458 Bacteria 1801
36 Ga0070681_10276630 3300005458 Bacteria 1590
37 Ga0070681_10301941 3300005458 Bacteria 1511
38 Ga0070681_10474582 3300005458 Bacteria 1163
39 Ga0070706_100137081 3300005467 Bacteria 2284
40 Ga0070707_100379558 3300005468 Bacteria 1373
41 Ga0070679_100005040 3300005530 Bacteria 12191
42 Ga0070679_100011259 3300005530 Bacteria 8525
43 Ga0070679_100040555 3300005530 Bacteria 4632
44 Ga0070679_100043505 3300005530 Bacteria 4473
45 Ga0070679_100125964 3300005530 Bacteria 2544
46 Ga0070684_100006994 3300005535 Bacteria 8763
47 Ga0068853_100108866 3300005539 Bacteria 2459
48 Ga0070696_100058866 3300005546 Bacteria 2684
49 Ga0068855_100020798 3300005563 Bacteria 7868
50 Ga0068855_100079888 3300005563 Bacteria 3792
51 Ga0068855_100138220 3300005563 Bacteria 2779
52 Ga0068855_100235547 3300005563 Bacteria 2047
53 Ga0068855_100430200 3300005563 Bacteria 1443
54 Ga0068855_100473777 3300005563 Bacteria 1363
55 Ga0068857_100012707 3300005577 Bacteria 7338
56 Ga0068857_100022167 3300005577 Bacteria 5586
57 Ga0068856_100034954 3300005614 Bacteria 4924
58 Ga0068856_100309581 3300005614 Unclassified 1597
59 Ga0068852_100025363 3300005616 Bacteria 4803
60 Ga0081455_10082302 3300005937 Bacteria 2633
61 Ga0070717_10208388 3300006028 Bacteria 1715
62 Ga0070712_100314884 3300006175 Bacteria 1271
63 Ga0068871_100214906 3300006358 Bacteria 1664
64 Ga0105240_10011956 3300009093 Bacteria 12032
65 Ga0105240_10069876 3300009093 Bacteria 4346
66 Ga0105245_10187770 3300009098 Bacteria 1978
67 Ga0105243_10032424 3300009148 Bacteria 4037
68 Ga0105241_10181750 3300009174 Bacteria 1745
69 Ga0105242_10098213 3300009176 Bacteria 2477
70 Ga0105237_10242375 3300009545 Bacteria 1804
71 Ga0105238_10037303 3300009551 Bacteria 4941
72 Ga0105238_10681951 3300009551 Bacteria 1039
73 Ga0105239_10272977 3300010375 Bacteria 1902
74 Ga0105239_10274110 3300010375 Bacteria 1898
75 Ga0157373_10069360 3300013100 Bacteria 2492
76 Ga0157371_10148251 3300013102 Bacteria 1673
77 Ga0157370_10004057 3300013104 Bacteria 16986
78 Ga0157370_10015080 3300013104 Bacteria 7875
79 Ga0157370_10042920 3300013104 Bacteria 4355
80 Ga0157370_10099541 3300013104 Bacteria 2725
81 Ga0157370_10125291 3300013104 Bacteria 2398
82 Ga0157370_10248800 3300013104 Bacteria 1644
83 Ga0157370_10282989 3300013104 Bacteria 1532
84 Ga0157369_10016140 3300013105 Bacteria 8406
85 Ga0157369_10021975 3300013105 Bacteria 7130
86 Ga0157369_10092774 3300013105 Bacteria 3223
87 Ga0157369_10310647 3300013105 Bacteria 1639
88 Ga0157369_10603857 3300013105 Bacteria 1132
89 Ga0157378_10110150 3300013297 Bacteria 2523
90 Ga0157372_10052671 3300013307 Bacteria 4532
91 Ga0157372_10202244 3300013307 Bacteria 2301
92 Ga0157372_10321169 3300013307 Bacteria 1803
93 Ga0163163_10532131 3300014325 Bacteria 1238
94 Ga0182008_10004564 3300014497 Bacteria 8064
95 Ga0182008_10117652 3300014497 Bacteria 1319
96 Ga0182006_1094393 3300015261 Bacteria 1071
97 Ga0206356_10139283 3300020070 Bacteria 5179
98 Ga0206354_10228155 3300020081 Bacteria 6157
99 Ga0206354_11270280 3300020081 Bacteria 4861
100 Ga0206353_10381980 3300020082 Bacteria 5299
101 Ga0206353_11481031 3300020082 Bacteria 9625
102 Ga0213876_10079968 3300021384 Bacteria 1728
103 Ga0207699_10321571 3300025906 Bacteria 1085
104 Ga0207705_10018512 3300025909 Bacteria 4979
105 Ga0207705_10032374 3300025909 Bacteria 3736
106 Ga0207707_10010170 3300025912 Bacteria 8165
107 Ga0207707_10011540 3300025912 Bacteria 7693
108 Ga0207707_10041749 3300025912 Bacteria 4006
109 Ga0207707_10051669 3300025912 Bacteria 3580
110 Ga0207707_10090093 3300025912 Bacteria 2681
111 Ga0207707_10110705 3300025912 Bacteria 2400
112 Ga0207707_10329399 3300025912 Bacteria 1317
113 Ga0207695_10124496 3300025913 Bacteria 2542
114 Ga0207695_10221881 3300025913 Bacteria 1797
115 Ga0207695_10266238 3300025913 Bacteria 1610
116 Ga0207693_10140335 3300025915 Bacteria 1900
117 Ga0207663_10219690 3300025916 Bacteria 1382
118 Ga0207660_10132357 3300025917 Bacteria 1899
119 Ga0207660_10161415 3300025917 Bacteria 1729
120 Ga0207660_10368558 3300025917 Bacteria 1153
121 Ga0207657_10002977 3300025919 Bacteria 18168
122 Ga0207657_10003156 3300025919 Bacteria 17625
123 Ga0207657_10011528 3300025919 Bacteria 8775
124 Ga0207657_10025028 3300025919 Bacteria 5514
125 Ga0207657_10147073 3300025919 Bacteria 1921
126 Ga0207657_10147077 3300025919 Bacteria 1921
127 Ga0207657_10207672 3300025919 Bacteria 1573
128 Ga0207649_10015004 3300025920 Bacteria 4350
129 Ga0207649_10069148 3300025920 Bacteria 2247
130 Ga0207649_10086844 3300025920 Bacteria 2039
131 Ga0207649_10228904 3300025920 Archaea 1328
132 Ga0207652_10012779 3300025921 Bacteria 6788
133 Ga0207652_10062397 3300025921 Bacteria 3221
134 Ga0207652_10208269 3300025921 Bacteria 1760
135 Ga0207652_10523463 3300025921 Bacteria 1067
136 Ga0207646_10307304 3300025922 Bacteria 1433
137 Ga0207694_10124816 3300025924 Bacteria 2058
138 Ga0207700_10106370 3300025928 Bacteria 2249
139 Ga0207700_10151670 3300025928 Bacteria 1916
140 Ga0207700_10344202 3300025928 Bacteria 1297
141 Ga0207664_10023655 3300025929 Bacteria 4606
142 Ga0207664_10027377 3300025929 Bacteria 4321
143 Ga0207664_10045428 3300025929 Bacteria 3444
144 Ga0207644_10096946 3300025931 Bacteria 2208
145 Ga0207690_10076038 3300025932 Bacteria 2330
146 Ga0207690_10588248 3300025932 Bacteria 907
147 Ga0207686_10049316 3300025934 Bacteria 2613
148 Ga0207665_10120042 3300025939 Bacteria 1856
149 Ga0207661_10036761 3300025944 Bacteria 3825
150 Ga0207661_10190551 3300025944 Bacteria 1797
151 Ga0207661_10365506 3300025944 Unclassified 1304
152 Ga0207667_10103233 3300025949 Bacteria 2941
153 Ga0207667_10133331 3300025949 Bacteria 2559
154 Ga0207667_10194634 3300025949 Bacteria 2080
155 Ga0207667_10285227 3300025949 Bacteria 1687
156 Ga0207667_10292261 3300025949 Bacteria 1665
157 Ga0207667_10420225 3300025949 Bacteria 1360
158 Ga0207667_10468346 3300025949 Bacteria 1279
159 Ga0207678_10144261 3300026067 Bacteria 2032
160 Ga0207702_10191946 3300026078 Bacteria 1888
161 Ga0207702_10196036 3300026078 Bacteria 1869
162 Ga0207702_10257094 3300026078 Bacteria 1643
163 Ga0207702_10692463 3300026078 Bacteria 1004
164 Ga0207674_10014089 3300026116 Bacteria 8834
165 Ga0207674_10059627 3300026116 Bacteria 3861
166 Ga0207683_10127887 3300026121 Bacteria 2284
167 Ga0207698_10010414 3300026142 Bacteria 5973
168 Ga0207698_10045319 3300026142 Bacteria 3312
169 Ga0373944_0031789 3300035089 Bacteria 1591
170 Ga0373945_0003101 3300035116 Bacteria 5217
171 Ga0373956_0125786 3300035119 Bacteria 1199
172 Ga0373943_0009018 3300035170 Bacteria 4472
173 Ga0373935_0030618 3300035692 Bacteria 3336
174 Ga0373947_0001020 3300035725 Bacteria 17119
175 Ga0373937_0387605 3300036401 Bacteria 1325
176 Ga0373925_0020478 3300037068 Bacteria 4815
177 Ga0395899_0079923 3300037312 Bacteria 2381
178 Ga0395900_0039350 3300037418 Bacteria 4872
179 Ga0395900_0168587 3300037418 Bacteria 2230
180 Ga0395898_0070097 3300037466 Bacteria 3390
181 Ga0395898_0147620 3300037466 Bacteria 2250
182 Ga0395898_0197131 3300037466 Bacteria 1923
183 Ga0395898_0250863 3300037466 Bacteria 1688
184 Ga0395898_0408868 3300037466 Bacteria 1294
185 Ga0395898_0474777 3300037466 Bacteria 1190
186 Ga0395898_0655373 3300037466 Bacteria 992
187 Ga0395905_0012023 3300037471 Bacteria 8347
188 Ga0395905_0208229 3300037471 Bacteria 1833
189 Ga0395901_0016940 3300038443 Bacteria 7428
190 Ga0395901_0022347 3300038443 Bacteria 6482
191 Ga0395901_0087823 3300038443 Bacteria 3251
192 Ga0395901_0726789 3300038443 Bacteria 988
193 Ga0436365_0306604 3300039437 Bacteria 3690
194 Ga0436365_0858410 3300039437 Bacteria 1788
195 Ga0436365_1866824 3300039437 Bacteria 2189
196 Ga0439448_0099392 3300042005 Bacteria 988
197 Ga0466969_0132731 3300044656 Bacteria 1154
198 Ga0466966_0217507 3300044684 Bacteria 1154
199 Ga0466961_0005966 3300044693 Bacteria 7719
200 Ga0466961_0057192 3300044693 Bacteria 2483
201 Ga0466963_0001525 3300044694 Bacteria 12535
202 Ga0466963_0002106 3300044694 Bacteria 11002
203 Ga0466963_0010532 3300044694 Bacteria 5600
204 Ga0466963_0035261 3300044694 Bacteria 3258
205 Ga0466963_0045897 3300044694 Bacteria 2879
206 Ga0466963_0053748 3300044694 Bacteria 2675
207 Ga0466963_0056839 3300044694 Bacteria 2604
208 Ga0466963_0067311 3300044694 Bacteria 2403
209 Ga0466963_0086676 3300044694 Bacteria 2128
210 Ga0466963_0107600 3300044694 Bacteria 1912
211 Ga0466963_0130753 3300044694 Bacteria 1734
212 Ga0466963_0318139 3300044694 Bacteria 1095
213 Ga0466964_0006255 3300044706 Bacteria 4438
214 Ga0466964_0014769 3300044706 Bacteria 2972
215 Ga0466964_0018427 3300044706 Bacteria 2679
216 Ga0466971_0000367 3300044719 Bacteria 17387
217 Ga0466968_0029201 3300044735 Bacteria 2279
218 Ga0466968_0191765 3300044735 Bacteria 954
219 Ga0466970_0211909 3300044765 Unclassified 1080
220 Ga0466957_0001762 3300044842 Bacteria 11387
221 Ga0466957_0081755 3300044842 Bacteria 2012
222 Ga0466959_0022970 3300045049 Bacteria 4612
223 Ga0466959_0027029 3300045049 Bacteria 4256
224 Ga0466958_0002606 3300045836 Bacteria 9110
225 Ga0466958_0019456 3300045836 Bacteria 3952
226 Ga0466958_0160940 3300045836 Bacteria 1418
227 Ga0466967_0000189 3300045976 Bacteria 25578
228 Ga0466967_0007197 3300045976 Bacteria 7992
229 Ga0466967_0012869 3300045976 Bacteria 6430
230 Ga0466967_0015681 3300045976 Bacteria 5950
231 Ga0466967_0016407 3300045976 Bacteria 5841
232 Ga0466967_0026962 3300045976 Bacteria 4770
233 Ga0466967_0033106 3300045976 Bacteria 4373
234 Ga0466967_0038923 3300045976 Bacteria 4082
235 Ga0466967_0046250 3300045976 Bacteria 3788
236 Ga0466967_0100899 3300045976 Bacteria 2637
237 Ga0466967_0172406 3300045976 Bacteria 2036
238 Ga0466967_0217698 3300045976 Bacteria 1813
239 Ga0466967_0233601 3300045976 Bacteria 1752
240 Ga0466967_0234298 3300045976 Bacteria 1749
241 Ga0466967_0318886 3300045976 Bacteria 1498
242 Ga0466967_0513617 3300045976 Bacteria 1177
243 Ga0495651_0007113 3300046462 Bacteria 8556
244 Ga0495653_0020836 3300046463 Bacteria 5312
245 Ga0495608_0036379 3300046511 Bacteria 3315
246 Ga0495587_0090142 3300046536 Bacteria 1771
247 Ga0495667_0056908 3300046559 Bacteria 2570
248 Ga0495657_0064216 3300046675 Bacteria 2419
249 Ga0495599_0085298 3300046678 Bacteria 1972
250 Ga0495623_0096498 3300046679 Bacteria 1806
251 Ga0495658_0010279 3300046683 Bacteria 4681
252 Ga0495613_0124055 3300046689 Bacteria 1853
253 Ga0495613_0450537 3300046689 Unclassified 872
254 Ga0495600_0020963 3300046809 Bacteria 4183
255 Ga0495604_0222838 3300047317 Bacteria 1297
256 Ga0495676_0040867 3300047321 Bacteria 3824
257 Ga0495680_0023376 3300047322 Bacteria 5140
258 Ga0496100_0013145 3300048903 Bacteria 4766
259 Ga0496100_0016121 3300048903 Bacteria 4380
260 Ga0496101_0000899 3300048904 Bacteria 17493
261 Ga0496101_0005331 3300048904 Bacteria 8190
262 Ga0496102_0005488 3300048905 Bacteria 10762
263 Ga0496102_0037612 3300048905 Bacteria 4366
264 Ga0496104_0017974 3300048907 Bacteria 6446
265 Ga0496105_0058297 3300048908 Bacteria 3187
266 Ga0496106_0001540 3300048909 Bacteria 17348
267 Ga0496106_0054031 3300048909 Bacteria 3034
268 Ga0496107_0004558 3300048910 Bacteria 9386
269 Ga0496107_0007067 3300048910 Bacteria 7732
270 Ga0496108_0012057 3300048911 Bacteria 7027
271 Ga0496109_0004206 3300048912 Bacteria 12006
272 Ga0496110_0039482 3300048913 Bacteria 4110
273 Ga0496111_0134888 3300048914 Bacteria 1828
274 Ga0496112_0015507 3300048915 Bacteria 7116
275 Ga0496113_0419211 3300048916 Bacteria 1075
276 Ga0496114_0032870 3300048917 Bacteria 4272
277 Ga0496115_0002332 3300048918 Bacteria 13603
278 Ga0496115_0087113 3300048918 Bacteria 2548
279 Ga0501067_0001486 3300049583 Bacteria 12752
280 Ga0501069_0004778 3300049585 Bacteria 7011
281 Ga0501070_0181438 3300049586 Bacteria 1732
282 nmdc:mga0n895_8607_c1 3300050512 Bacteria 8851
283 Ga0495595_0029221 3300053084 Bacteria 2466
284 Ga0495619_0012122 3300053085 Bacteria 5429
285 Ga0466962_0001316 3300061719 Bacteria 11448
286 Ga0530510_0311369 3300061734 Unclassified 1179
287 Ga0075428_100000006
288 rootH1_10077860
289 Ga0070658_10006633
290 Ga0070658_10020633
291 Ga0070658_10442985
292 Ga0070683_100005078
293 Ga0070683_100500322
294 Ga0070680_100031686
295 Ga0070680_100145123
296 Ga0070660_100002000
297 Ga0070660_100005317
298 Ga0070660_100011560
299 Ga0070660_100041171
300 Ga0070660_100094015
301 Ga0070660_100159048
302 Ga0070661_100066117
303 Ga0070661_100164494
304 Ga0070661_100176241
305 Ga0070671_100104869
306 Ga0070659_100033293
307 Ga0070659_100100440
308 Ga0070659_100177156
309 Ga0070714_100109416
310 Ga0070714_100641518
311 Ga0070713_100071945
312 Ga0070713_100280764
313 Ga0070711_100280086
314 Ga0070708_100182385
315 Ga0070678_100220178
316 Ga0070681_10007238
317 Ga0070681_10011759
318 Ga0070681_10013600
319 Ga0070681_10051198
320 Ga0070681_10102603
321 Ga0070681_10222745
322 Ga0070681_10276630
323 Ga0070681_10301941
324 Ga0070681_10474582
325 Ga0070706_100137081
326 Ga0070707_100379558
327 Ga0070679_100005040
328 Ga0070679_100011259
329 Ga0070679_100040555
330 Ga0070679_100043505
331 Ga0070679_100125964
332 Ga0070684_100006994
333 Ga0068853_100108866
334 Ga0070696_100058866
335 Ga0068855_100020798
336 Ga0068855_100079888
337 Ga0068855_100138220
338 Ga0068855_100235547
339 Ga0068855_100430200
340 Ga0068855_100473777
341 Ga0068857_100012707
342 Ga0068857_100022167
343 Ga0068856_100034954
344 Ga0068856_100309581
345 Ga0068852_100025363
346 Ga0081455_10082302
347 Ga0070717_10208388
348 Ga0070712_100314884
349 Ga0068871_100214906
350 Ga0105240_10011956
351 Ga0105240_10069876
352 Ga0105245_10187770
353 Ga0105243_10032424
354 Ga0105241_10181750
355 Ga0105242_10098213
356 Ga0105237_10242375
357 Ga0105238_10037303
358 Ga0105238_10681951
359 Ga0105239_10272977
360 Ga0105239_10274110
361 Ga0157373_10069360
362 Ga0157371_10148251
363 Ga0157370_10004057
364 Ga0157370_10015080
365 Ga0157370_10042920
366 Ga0157370_10099541
367 Ga0157370_10125291
368 Ga0157370_10248800
369 Ga0157370_10282989
370 Ga0157369_10016140
371 Ga0157369_10021975
372 Ga0157369_10092774
373 Ga0157369_10310647
374 Ga0157369_10603857
375 Ga0157378_10110150
376 Ga0157372_10052671
377 Ga0157372_10202244
378 Ga0157372_10321169
379 Ga0163163_10532131
380 Ga0182008_10004564
381 Ga0182008_10117652
382 Ga0182006_1094393
383 Ga0206356_10139283
384 Ga0206354_10228155
385 Ga0206354_11270280
386 Ga0206353_10381980
387 Ga0206353_11481031
388 Ga0213876_10079968
389 Ga0207699_10321571
390 Ga0207705_10018512
391 Ga0207705_10032374
392 Ga0207707_10010170
393 Ga0207707_10011540
394 Ga0207707_10041749
395 Ga0207707_10051669
396 Ga0207707_10090093
397 Ga0207707_10110705
398 Ga0207707_10329399
399 Ga0207695_10124496
400 Ga0207695_10221881
401 Ga0207695_10266238
402 Ga0207693_10140335
403 Ga0207663_10219690
404 Ga0207660_10132357
405 Ga0207660_10161415
406 Ga0207660_10368558
407 Ga0207657_10002977
408 Ga0207657_10003156
409 Ga0207657_10011528
410 Ga0207657_10025028
411 Ga0207657_10147073
412 Ga0207657_10147077
413 Ga0207657_10207672
414 Ga0207649_10015004
415 Ga0207649_10069148
416 Ga0207649_10086844
417 Ga0207649_10228904
418 Ga0207652_10012779
419 Ga0207652_10062397
420 Ga0207652_10208269
421 Ga0207652_10523463
422 Ga0207646_10307304
423 Ga0207694_10124816
424 Ga0207700_10106370
425 Ga0207700_10151670
426 Ga0207700_10344202
427 Ga0207664_10023655
428 Ga0207664_10027377
429 Ga0207664_10045428
430 Ga0207644_10096946
431 Ga0207690_10076038
432 Ga0207690_10588248
433 Ga0207686_10049316
434 Ga0207665_10120042
435 Ga0207661_10036761
436 Ga0207661_10190551
437 Ga0207661_10365506
438 Ga0207667_10103233
439 Ga0207667_10133331
440 Ga0207667_10194634
441 Ga0207667_10285227
442 Ga0207667_10292261
443 Ga0207667_10420225
444 Ga0207667_10468346
445 Ga0207678_10144261
446 Ga0207702_10191946
447 Ga0207702_10196036
448 Ga0207702_10257094
449 Ga0207702_10692463
450 Ga0207674_10014089
451 Ga0207674_10059627
452 Ga0207683_10127887
453 Ga0207698_10010414
454 Ga0207698_10045319
455 Ga0373944_0031789
456 Ga0373945_0003101
457 Ga0373956_0125786
458 Ga0373943_0009018
459 Ga0373935_0030618
460 Ga0373947_0001020
461 Ga0373937_0387605
462 Ga0373925_0020478
463 Ga0395899_0079923
464 Ga0395900_0039350
465 Ga0395900_0168587
466 Ga0395898_0070097
467 Ga0395898_0147620
468 Ga0395898_0197131
469 Ga0395898_0250863
470 Ga0395898_0408868
471 Ga0395898_0474777
472 Ga0395898_0655373
473 Ga0395905_0012023
474 Ga0395905_0208229
475 Ga0395901_0016940
476 Ga0395901_0022347
477 Ga0395901_0087823
478 Ga0395901_0726789
479 Ga0436365_0306604
480 Ga0436365_0858410
481 Ga0436365_1866824
482 Ga0439448_0099392
483 Ga0466969_0132731
484 Ga0466966_0217507
485 Ga0466961_0005966
486 Ga0466961_0057192
487 Ga0466963_0001525
488 Ga0466963_0002106
489 Ga0466963_0010532
490 Ga0466963_0035261
491 Ga0466963_0045897
492 Ga0466963_0053748
493 Ga0466963_0056839
494 Ga0466963_0067311
495 Ga0466963_0086676
496 Ga0466963_0107600
497 Ga0466963_0130753
498 Ga0466963_0318139
499 Ga0466964_0006255
500 Ga0466964_0014769
501 Ga0466964_0018427
502 Ga0466971_0000367
503 Ga0466968_0029201
504 Ga0466968_0191765
505 Ga0466970_0211909
506 Ga0466957_0001762
507 Ga0466957_0081755
508 Ga0466959_0022970
509 Ga0466959_0027029
510 Ga0466958_0002606
511 Ga0466958_0019456
512 Ga0466958_0160940
513 Ga0466967_0000189
514 Ga0466967_0007197
515 Ga0466967_0012869
516 Ga0466967_0015681
517 Ga0466967_0016407
518 Ga0466967_0026962
519 Ga0466967_0033106
520 Ga0466967_0038923
521 Ga0466967_0046250
522 Ga0466967_0100899
523 Ga0466967_0172406
524 Ga0466967_0217698
525 Ga0466967_0233601
526 Ga0466967_0234298
527 Ga0466967_0318886
528 Ga0466967_0513617
529 Ga0495651_0007113
530 Ga0495653_0020836
531 Ga0495608_0036379
532 Ga0495587_0090142
533 Ga0495667_0056908
534 Ga0495657_0064216
535 Ga0495599_0085298
536 Ga0495623_0096498
537 Ga0495658_0010279
538 Ga0495613_0124055
539 Ga0495613_0450537
540 Ga0495600_0020963
541 Ga0495604_0222838
542 Ga0495676_0040867
543 Ga0495680_0023376
544 Ga0496100_0013145
545 Ga0496100_0016121
546 Ga0496101_0000899
547 Ga0496101_0005331
548 Ga0496102_0005488
549 Ga0496102_0037612
550 Ga0496104_0017974
551 Ga0496105_0058297
552 Ga0496106_0001540
553 Ga0496106_0054031
554 Ga0496107_0004558
555 Ga0496107_0007067
556 Ga0496108_0012057
557 Ga0496109_0004206
558 Ga0496110_0039482
559 Ga0496111_0134888
560 Ga0496112_0015507
561 Ga0496113_0419211
562 Ga0496114_0032870
563 Ga0496115_0002332
564 Ga0496115_0087113
565 Ga0501067_0001486
566 Ga0501069_0004778
567 Ga0501070_0181438
568 nmdc:mga0n895_8607_c1
569 Ga0495595_0029221
570 Ga0495619_0012122
571 Ga0466962_0001316
572 Ga0530510_0311369

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06182

ABC2_membrane_6

ABC-2 family transporter protein

34

265

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.5514 28 264
7k2t-assembly1.cif.gz_B mg2+/atp-bound structure of the full-length wzmwzt o antigen abc transporter in lipid nanodiscs 0.5479 26 262
8wam-assembly1.cif.gz_B cryo-em structure of the abcg25 e232q mutant bound to atp and magnesium 0.5444 65 261
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.52 35 262
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.5076 28 264
ID Description Score Start End Superfamily
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5117 63 254 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4246 28 254 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.3966 63 254 3.40.1710.10
af_Q9LSE7_201_388_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3887 60 264 1.20.120.1770
af_I1KZ04_198_383_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3845 60 265 1.20.120.1770
ID Description Score Start End GO Terms
AF-A0A7V8X5B7-F1-model_v4 ABC-2 family transporter protein 0.9114 123 267 GO:0016020
AF-A0A7U9SYA8-F1-model_v4 ABC transporter permease 0.907 121 267 GO:0016020
AF-J0KKI4-F1-model_v4 ABC-type uncharacterized transport system, permease component 0.9027 113 267 GO:0016020
AF-A0A6G2UK04-F1-model_v4 Transporter 0.8907 41 267 GO:0016020
AF-A0A345I0M9-F1-model_v4 Transporter 0.8894 29 267 GO:0016020

Map