F387227

General Info

Members Datasets Scaffolds Average Seq Length
286 160 572 486

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100021980|Ga0070670_1000219802
Length 530
Sequence MTSENSLLVVNHPREFPWAITGATVISAREYLAGTAHFEGRRAHVINLCRHDRYQSRGYYVSLLAEARGQRPLPDMKSVGDLQSTSHPTGFSRPEFVAALQSLLHDQTGNEFTIDVIFGRDLARRRDELAQRIFQSLPAPLLRVSFEKVHGGWRTSRVQVLGLMDLNRAEREFVAAAVNSYLHQRPSRPRNCSAGMPALAILYNEDEPDPPSNVEALNCFIRLANSRGLRAEIIGRGDRDRLAEFDGLFIRDTTRVNHYTYEMARAAADAGLVVIDDPDSIVRCTNKVFLNELFVRHRVPIPKTVMVDPRTNAETVVEQLGLPCVVKRPDSAFSLGVFKVETIDALEDALASLLGQSELVLAQEWFPTSFDWRVGVLDRRALYVCKYFMAPGHWQVVKREPQRKLEGSTETVAVGEAPEAVVKTAVRAANLIGDGLYGVDLKEVDGKCYVMEVNDNPNIDAGNEDAVLKDALYREIIGVFLRRIGEPARPHNGHDEARTGNWQNGMAIKYEGGEIAAKDSEGSDSRRIPV

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
132 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
142 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
143 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
149 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
160 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.55
Metatranscriptomes 1.75
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 1.4
Rhizosphere 97.55
Stem 0
Stem Tuber 0
Unclassified 1.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100021980 3300005331 Bacteria 5489
2 Ga0070658_10081009 3300005327 Bacteria 2666
3 Ga0070658_10090460 3300005327 Bacteria 2521
4 Ga0070683_100004352 3300005329 Bacteria 11652
5 Ga0070683_100022516 3300005329 Bacteria 5632
6 Ga0070670_100001409 3300005331 Bacteria 19309
7 Ga0070670_100015206 3300005331 Bacteria 6605
8 Ga0070670_100016865 3300005331 Bacteria 6269
9 Ga0070670_100027774 3300005331 Bacteria 4868
10 Ga0070670_100076509 3300005331 Bacteria 2876
11 Ga0070677_10004070 3300005333 Bacteria 4747
12 Ga0070680_100063714 3300005336 Bacteria 3020
13 Ga0070680_100108919 3300005336 Bacteria 2305
14 Ga0070682_100079297 3300005337 Bacteria 2120
15 Ga0070660_100001462 3300005339 Bacteria 16161
16 Ga0070660_100008855 3300005339 Bacteria 7054
17 Ga0070661_100009983 3300005344 Bacteria 6588
18 Ga0070661_100017072 3300005344 Bacteria 5144
19 Ga0070661_100054831 3300005344 Bacteria 2920
20 Ga0070668_100011930 3300005347 Bacteria 6470
21 Ga0070668_100014891 3300005347 Bacteria 5814
22 Ga0070669_100094797 3300005353 Bacteria 2243
23 Ga0070675_100033404 3300005354 Bacteria 4171
24 Ga0070671_100016210 3300005355 Bacteria 6026
25 Ga0070671_100114112 3300005355 Bacteria 2271
26 Ga0070673_100130821 3300005364 Bacteria 2105
27 Ga0070659_100002527 3300005366 Bacteria 12997
28 Ga0070659_100033450 3300005366 Bacteria 3993
29 Ga0070667_100052114 3300005367 Bacteria 3452
30 Ga0070667_100080074 3300005367 Bacteria 2793
31 Ga0070667_100090435 3300005367 Bacteria 2631
32 Ga0070667_100166466 3300005367 Bacteria 1944
33 Ga0070709_10002575 3300005434 Bacteria 9809
34 Ga0070714_100014382 3300005435 Bacteria 6357
35 Ga0070713_100000271 3300005436 Bacteria 34038
36 Ga0070713_100011805 3300005436 Bacteria 6382
37 Ga0070700_100091345 3300005441 Bacteria 1987
38 Ga0070663_100168414 3300005455 Bacteria 1691
39 Ga0070678_100057881 3300005456 Bacteria 2842
40 Ga0070662_100007218 3300005457 Bacteria 7199
41 Ga0070681_10000369 3300005458 Bacteria 36274
42 Ga0070681_10111978 3300005458 Bacteria 2669
43 Ga0070681_10273378 3300005458 Bacteria 1601
44 Ga0070699_100030984 3300005518 Bacteria 4618
45 Ga0070679_100034878 3300005530 Bacteria 4990
46 Ga0070679_100036210 3300005530 Bacteria 4897
47 Ga0070679_100046767 3300005530 Bacteria 4314
48 Ga0070679_100163476 3300005530 Bacteria 2200
49 Ga0070684_100004443 3300005535 Bacteria 10678
50 Ga0068853_100035673 3300005539 Bacteria 4225
51 Ga0068853_100069647 3300005539 Bacteria 3061
52 Ga0068853_100123552 3300005539 Bacteria 2311
53 Ga0070672_100105968 3300005543 Bacteria 2286
54 Ga0070696_100001766 3300005546 Bacteria 14180
55 Ga0070665_100039142 3300005548 Unclassified 4769
56 Ga0070665_100155975 3300005548 Bacteria 2285
57 Ga0070665_100164114 3300005548 Bacteria 2224
58 Ga0068855_100004822 3300005563 Bacteria 16467
59 Ga0068855_100339782 3300005563 Bacteria 1656
60 Ga0070664_100003697 3300005564 Bacteria 12331
61 Ga0070664_100005424 3300005564 Bacteria 10236
62 Ga0070664_100150784 3300005564 Bacteria 2052
63 Ga0068857_100037294 3300005577 Bacteria 4305
64 Ga0068857_100041421 3300005577 Bacteria 4084
65 Ga0068854_100004485 3300005578 Bacteria 8803
66 Ga0068856_100015866 3300005614 Bacteria 7284
67 Ga0068856_100016143 3300005614 Bacteria 7220
68 Ga0068856_100021188 3300005614 Bacteria 6313
69 Ga0068856_100024087 3300005614 Bacteria 5923
70 Ga0068856_100136122 3300005614 Bacteria 2462
71 Ga0068852_100002363 3300005616 Bacteria 13003
72 Ga0068852_100096647 3300005616 Bacteria 2656
73 Ga0068859_100114921 3300005617 Bacteria 2755
74 Ga0068864_100026746 3300005618 Bacteria 4866
75 Ga0068864_100038697 3300005618 Bacteria 4074
76 Ga0068864_100042687 3300005618 Bacteria 3881
77 Ga0068861_100009473 3300005719 Bacteria 6725
78 Ga0068861_100038062 3300005719 Bacteria 3578
79 Ga0068851_10002046 3300005834 Bacteria 8896
80 Ga0068851_10003457 3300005834 Bacteria 7026
81 Ga0068851_10007926 3300005834 Bacteria 4895
82 Ga0068863_100014279 3300005841 Bacteria 7649
83 Ga0068863_100023959 3300005841 Bacteria 5825
84 Ga0068863_100031648 3300005841 Bacteria 5048
85 Ga0068863_100047256 3300005841 Bacteria 4083
86 Ga0068858_100021699 3300005842 Bacteria 6000
87 Ga0068858_100124569 3300005842 Bacteria 2412
88 Ga0068860_100032268 3300005843 Bacteria 5033
89 Ga0068860_100050493 3300005843 Bacteria 3960
90 Ga0068862_100193228 3300005844 Bacteria 1832
91 Ga0081539_10000178 3300005985 Bacteria 149201
92 Ga0081539_10003197 3300005985 Bacteria 20709
93 Ga0070716_100094379 3300006173 Bacteria 1819
94 Ga0070712_100010316 3300006175 Bacteria 5890
95 Ga0097621_100111784 3300006237 Bacteria 2309
96 Ga0075431_100146955 3300006847 Unclassified 2429
97 Ga0075431_100148462 3300006847 Bacteria 2415
98 Ga0097620_100114925 3300006931 Bacteria 2755
99 Ga0105240_10001181 3300009093 Bacteria 45705
100 Ga0105240_10008690 3300009093 Bacteria 14491
101 Ga0105240_10036930 3300009093 Bacteria 6280
102 Ga0105240_10039993 3300009093 Bacteria 6003
103 Ga0111539_10029870 3300009094 Bacteria 6631
104 Ga0105241_10001952 3300009174 Bacteria 15614
105 Ga0105241_10013383 3300009174 Bacteria 6012
106 Ga0105242_10027654 3300009176 Unclassified 4507
107 Ga0105248_10030211 3300009177 Bacteria 6049
108 Ga0105248_10033410 3300009177 Bacteria 5747
109 Ga0105248_10036508 3300009177 Bacteria 5497
110 Ga0105248_10091199 3300009177 Bacteria 3432
111 Ga0105237_10046268 3300009545 Bacteria 4377
112 Ga0105237_10082868 3300009545 Bacteria 3198
113 Ga0105238_10001272 3300009551 Bacteria 25357
114 Ga0105238_10125758 3300009551 Bacteria 2542
115 Ga0105239_10036402 3300010375 Bacteria 5403
116 Ga0157373_10003135 3300013100 Bacteria 12491
117 Ga0157373_10051478 3300013100 Bacteria 2933
118 Ga0157371_10018317 3300013102 Bacteria 5179
119 Ga0157370_10006756 3300013104 Bacteria 12583
120 Ga0157370_10017911 3300013104 Bacteria 7134
121 Ga0157370_10019586 3300013104 Bacteria 6781
122 Ga0157370_10032763 3300013104 Bacteria 5072
123 Ga0157370_10112185 3300013104 Bacteria 2549
124 Ga0157369_10010089 3300013105 Bacteria 10781
125 Ga0157374_10000117 3300013296 Bacteria 73027
126 Ga0157374_10158381 3300013296 Bacteria 2205
127 Ga0163162_10148358 3300013306 Bacteria 2462
128 Ga0157372_10009622 3300013307 Bacteria 10273
129 Ga0157372_10014755 3300013307 Bacteria 8363
130 Ga0157372_10051075 3300013307 Bacteria 4600
131 Ga0157372_10102879 3300013307 Bacteria 3263
132 Ga0157372_10245420 3300013307 Bacteria 2078
133 Ga0157372_10315472 3300013307 Bacteria 1820
134 Ga0163163_10006465 3300014325 Bacteria 10251
135 Ga0163163_10025054 3300014325 Bacteria 5683
136 Ga0163163_10165770 3300014325 Bacteria 2255
137 Ga0157379_10019350 3300014968 Bacteria 6013
138 Ga0206356_10771747 3300020070 Bacteria 5033
139 Ga0206354_11327353 3300020081 Bacteria 3204
140 Ga0206353_10007583 3300020082 Bacteria 2611
141 Ga0207697_10000857 3300025315 Bacteria 17209
142 Ga0207656_10034845 3300025321 Bacteria 2104
143 Ga0207682_10016998 3300025893 Bacteria 2841
144 Ga0207699_10061076 3300025906 Bacteria 2266
145 Ga0207645_10071156 3300025907 Bacteria 2226
146 Ga0207705_10068024 3300025909 Bacteria 2578
147 Ga0207654_10014828 3300025911 Bacteria 4034
148 Ga0207654_10018115 3300025911 Bacteria 3692
149 Ga0207707_10002579 3300025912 Bacteria 16231
150 Ga0207707_10060686 3300025912 Bacteria 3289
151 Ga0207707_10080397 3300025912 Bacteria 2846
152 Ga0207695_10013539 3300025913 Bacteria 9720
153 Ga0207695_10079590 3300025913 Bacteria 3321
154 Ga0207671_10027561 3300025914 Bacteria 4248
155 Ga0207693_10016120 3300025915 Bacteria 5980
156 Ga0207660_10008680 3300025917 Bacteria 6572
157 Ga0207662_10090238 3300025918 Unclassified 1884
158 Ga0207657_10001758 3300025919 Bacteria 23391
159 Ga0207657_10005088 3300025919 Bacteria 13782
160 Ga0207657_10009207 3300025919 Bacteria 9954
161 Ga0207649_10009710 3300025920 Bacteria 5270
162 Ga0207652_10010766 3300025921 Bacteria 7366
163 Ga0207652_10013540 3300025921 Bacteria 6597
164 Ga0207652_10020803 3300025921 Bacteria 5408
165 Ga0207652_10175067 3300025921 Bacteria 1927
166 Ga0207681_10032682 3300025923 Bacteria 3408
167 Ga0207694_10005684 3300025924 Bacteria 9565
168 Ga0207694_10162544 3300025924 Bacteria 1804
169 Ga0207650_10010294 3300025925 Bacteria 6410
170 Ga0207650_10016374 3300025925 Bacteria 5183
171 Ga0207650_10052445 3300025925 Bacteria 3021
172 Ga0207659_10085741 3300025926 Bacteria 2341
173 Ga0207659_10171090 3300025926 Bacteria 1714
174 Ga0207700_10000496 3300025928 Bacteria 23057
175 Ga0207664_10007958 3300025929 Bacteria 7369
176 Ga0207664_10052420 3300025929 Bacteria 3226
177 Ga0207664_10116052 3300025929 Bacteria 2233
178 Ga0207644_10030784 3300025931 Bacteria 3735
179 Ga0207690_10003076 3300025932 Bacteria 10050
180 Ga0207690_10005367 3300025932 Bacteria 7557
181 Ga0207706_10000850 3300025933 Bacteria 31426
182 Ga0207706_10013152 3300025933 Bacteria 7531
183 Ga0207691_10000706 3300025940 Bacteria 33060
184 Ga0207691_10001626 3300025940 Bacteria 22311
185 Ga0207691_10006315 3300025940 Bacteria 11442
186 Ga0207691_10009267 3300025940 Bacteria 9444
187 Ga0207691_10050957 3300025940 Bacteria 3788
188 Ga0207691_10071493 3300025940 Bacteria 3131
189 Ga0207689_10000307 3300025942 Bacteria 45007
190 Ga0207661_10062799 3300025944 Bacteria 3006
191 Ga0207679_10006783 3300025945 Bacteria 7254
192 Ga0207679_10046038 3300025945 Bacteria 3160
193 Ga0207667_10001211 3300025949 Bacteria 32264
194 Ga0207667_10066025 3300025949 Bacteria 3772
195 Ga0207667_10245320 3300025949 Bacteria 1833
196 Ga0207651_10131784 3300025960 Bacteria 1915
197 Ga0207640_10005124 3300025981 Bacteria 7127
198 Ga0207640_10090525 3300025981 Bacteria 2117
199 Ga0207658_10069145 3300025986 Bacteria 2667
200 Ga0207658_10079461 3300025986 Bacteria 2509
201 Ga0207677_10119876 3300026023 Bacteria 1977
202 Ga0207703_10014194 3300026035 Bacteria 6213
203 Ga0207703_10111927 3300026035 Bacteria 2331
204 Ga0207639_10018535 3300026041 Bacteria 4947
205 Ga0207639_10026952 3300026041 Bacteria 4180
206 Ga0207678_10003667 3300026067 Bacteria 13807
207 Ga0207678_10046042 3300026067 Bacteria 3772
208 Ga0207708_10015274 3300026075 Bacteria 5757
209 Ga0207702_10006099 3300026078 Bacteria 10445
210 Ga0207702_10007096 3300026078 Bacteria 9585
211 Ga0207702_10011161 3300026078 Bacteria 7494
212 Ga0207641_10014399 3300026088 Bacteria 6481
213 Ga0207641_10058307 3300026088 Bacteria 3286
214 Ga0207641_10109041 3300026088 Bacteria 2451
215 Ga0207648_10037770 3300026089 Bacteria 4252
216 Ga0207676_10010477 3300026095 Bacteria 6603
217 Ga0207676_10040718 3300026095 Bacteria 3562
218 Ga0207674_10000022 3300026116 Bacteria 161298
219 Ga0207674_10000273 3300026116 Bacteria 65119
220 Ga0207674_10010023 3300026116 Bacteria 10781
221 Ga0207674_10185194 3300026116 Bacteria 2033
222 Ga0207674_10195041 3300026116 Bacteria 1975
223 Ga0207675_100001001 3300026118 Bacteria 27952
224 Ga0207675_100050840 3300026118 Bacteria 3868
225 Ga0207683_10170285 3300026121 Bacteria 1972
226 Ga0207698_10002716 3300026142 Bacteria 10530
227 Ga0207698_10198098 3300026142 Bacteria 1796
228 Ga0209983_1003022 3300027665 Bacteria 3631
229 Ga0209971_1003229 3300027682 Bacteria 3882
230 Ga0209998_10003826 3300027717 Bacteria 3253
231 Ga0209974_10000965 3300027876 Bacteria 10084
232 Ga0268264_10141797 3300028381 Bacteria 2144
233 Ga0265330_10017228 3300031235 Bacteria 3330
234 Ga0307405_10008424 3300031731 Bacteria 5227
235 Ga0307413_10001534 3300031824 Bacteria 8864
236 Ga0307413_10078620 3300031824 Bacteria 2105
237 Ga0307410_10002451 3300031852 Bacteria 8955
238 Ga0307410_10003488 3300031852 Bacteria 7894
239 Ga0307412_10023524 3300031911 Bacteria 3792
240 Ga0307412_10051519 3300031911 Bacteria 2721
241 Ga0307409_100007113 3300031995 Bacteria 6661
242 Ga0307409_100042515 3300031995 Bacteria 3404
243 Ga0307416_100039504 3300032002 Bacteria 3654
244 Ga0307416_100048372 3300032002 Bacteria 3373
245 Ga0307414_10032853 3300032004 Bacteria 3422
246 Ga0307414_10055868 3300032004 Bacteria 2766
247 Ga0307411_10004789 3300032005 Bacteria 6554
248 Ga0373952_0000589 3300035092 Bacteria 6424
249 Ga0373960_0005502 3300035121 Bacteria 2939
250 Ga0395899_0000964 3300037312 Bacteria 26679
251 Ga0395899_0001192 3300037312 Bacteria 22913
252 Ga0395899_0177901 3300037312 Bacteria 1495
253 Ga0395900_0126240 3300037418 Bacteria 2624
254 Ga0395898_0116888 3300037466 Bacteria 2555
255 Ga0395905_0001030 3300037471 Bacteria 35512
256 Ga0395905_0008919 3300037471 Bacteria 9848
257 Ga0395905_0038413 3300037471 Bacteria 4493
258 Ga0395901_0073007 3300038443 Bacteria 3578
259 Ga0395901_0078699 3300038443 Bacteria 3442
260 Ga0395901_0224196 3300038443 Bacteria 1964
261 Ga0451577_0104633 3300042876 Bacteria 2529
262 Ga0466969_0038573 3300044656 Bacteria 2403
263 Ga0466972_0000034 3300044658 Bacteria 152086
264 Ga0466965_0041556 3300044683 Bacteria 2266
265 Ga0466964_0020726 3300044706 Bacteria 2534
266 Ga0466968_0001879 3300044735 Bacteria 7598
267 Ga0466959_0004041 3300045049 Bacteria 9757
268 Ga0466959_0088872 3300045049 Bacteria 2221
269 Ga0451576_0115752 3300045051 Bacteria 2791
270 Ga0495643_0005747 3300046522 Bacteria 8302
271 Ga0495642_0012210 3300046528 Bacteria 3310
272 Ga0495597_0026635 3300046542 Bacteria 2655
273 Ga0495661_0003998 3300046665 Bacteria 10751
274 Ga0495687_010920 3300047443 Bacteria 4928
275 Ga0495687_022528 3300047443 Bacteria 3021
276 Ga0496104_0174669 3300048907 Bacteria 2059
277 Ga0496110_0085640 3300048913 Bacteria 2813
278 Ga0496110_0110100 3300048913 Bacteria 2474
279 Ga0496113_0065674 3300048916 Bacteria 2747
280 nmdc:mga06r32_155965_c1 3300050510 Unclassified 2264
281 nmdc:mga08y16_41985_c1 3300050511 Bacteria 4790
282 Ga0500644_0011550 3300053088 Bacteria 2416
283 Ga0587077_000751 3300059493 Bacteria 3071
284 Ga0587076_000099 3300059645 Bacteria 4942
285 2644029105 2643221603 Bacteria 6147767
286 639786892 639633007 Bacteria 4376040
287 Ga0070670_100021980
288 Ga0070658_10081009
289 Ga0070658_10090460
290 Ga0070683_100004352
291 Ga0070683_100022516
292 Ga0070670_100001409
293 Ga0070670_100015206
294 Ga0070670_100016865
295 Ga0070670_100027774
296 Ga0070670_100076509
297 Ga0070677_10004070
298 Ga0070680_100063714
299 Ga0070680_100108919
300 Ga0070682_100079297
301 Ga0070660_100001462
302 Ga0070660_100008855
303 Ga0070661_100009983
304 Ga0070661_100017072
305 Ga0070661_100054831
306 Ga0070668_100011930
307 Ga0070668_100014891
308 Ga0070669_100094797
309 Ga0070675_100033404
310 Ga0070671_100016210
311 Ga0070671_100114112
312 Ga0070673_100130821
313 Ga0070659_100002527
314 Ga0070659_100033450
315 Ga0070667_100052114
316 Ga0070667_100080074
317 Ga0070667_100090435
318 Ga0070667_100166466
319 Ga0070709_10002575
320 Ga0070714_100014382
321 Ga0070713_100000271
322 Ga0070713_100011805
323 Ga0070700_100091345
324 Ga0070663_100168414
325 Ga0070678_100057881
326 Ga0070662_100007218
327 Ga0070681_10000369
328 Ga0070681_10111978
329 Ga0070681_10273378
330 Ga0070699_100030984
331 Ga0070679_100034878
332 Ga0070679_100036210
333 Ga0070679_100046767
334 Ga0070679_100163476
335 Ga0070684_100004443
336 Ga0068853_100035673
337 Ga0068853_100069647
338 Ga0068853_100123552
339 Ga0070672_100105968
340 Ga0070696_100001766
341 Ga0070665_100039142
342 Ga0070665_100155975
343 Ga0070665_100164114
344 Ga0068855_100004822
345 Ga0068855_100339782
346 Ga0070664_100003697
347 Ga0070664_100005424
348 Ga0070664_100150784
349 Ga0068857_100037294
350 Ga0068857_100041421
351 Ga0068854_100004485
352 Ga0068856_100015866
353 Ga0068856_100016143
354 Ga0068856_100021188
355 Ga0068856_100024087
356 Ga0068856_100136122
357 Ga0068852_100002363
358 Ga0068852_100096647
359 Ga0068859_100114921
360 Ga0068864_100026746
361 Ga0068864_100038697
362 Ga0068864_100042687
363 Ga0068861_100009473
364 Ga0068861_100038062
365 Ga0068851_10002046
366 Ga0068851_10003457
367 Ga0068851_10007926
368 Ga0068863_100014279
369 Ga0068863_100023959
370 Ga0068863_100031648
371 Ga0068863_100047256
372 Ga0068858_100021699
373 Ga0068858_100124569
374 Ga0068860_100032268
375 Ga0068860_100050493
376 Ga0068862_100193228
377 Ga0081539_10000178
378 Ga0081539_10003197
379 Ga0070716_100094379
380 Ga0070712_100010316
381 Ga0097621_100111784
382 Ga0075431_100146955
383 Ga0075431_100148462
384 Ga0097620_100114925
385 Ga0105240_10001181
386 Ga0105240_10008690
387 Ga0105240_10036930
388 Ga0105240_10039993
389 Ga0111539_10029870
390 Ga0105241_10001952
391 Ga0105241_10013383
392 Ga0105242_10027654
393 Ga0105248_10030211
394 Ga0105248_10033410
395 Ga0105248_10036508
396 Ga0105248_10091199
397 Ga0105237_10046268
398 Ga0105237_10082868
399 Ga0105238_10001272
400 Ga0105238_10125758
401 Ga0105239_10036402
402 Ga0157373_10003135
403 Ga0157373_10051478
404 Ga0157371_10018317
405 Ga0157370_10006756
406 Ga0157370_10017911
407 Ga0157370_10019586
408 Ga0157370_10032763
409 Ga0157370_10112185
410 Ga0157369_10010089
411 Ga0157374_10000117
412 Ga0157374_10158381
413 Ga0163162_10148358
414 Ga0157372_10009622
415 Ga0157372_10014755
416 Ga0157372_10051075
417 Ga0157372_10102879
418 Ga0157372_10245420
419 Ga0157372_10315472
420 Ga0163163_10006465
421 Ga0163163_10025054
422 Ga0163163_10165770
423 Ga0157379_10019350
424 Ga0206356_10771747
425 Ga0206354_11327353
426 Ga0206353_10007583
427 Ga0207697_10000857
428 Ga0207656_10034845
429 Ga0207682_10016998
430 Ga0207699_10061076
431 Ga0207645_10071156
432 Ga0207705_10068024
433 Ga0207654_10014828
434 Ga0207654_10018115
435 Ga0207707_10002579
436 Ga0207707_10060686
437 Ga0207707_10080397
438 Ga0207695_10013539
439 Ga0207695_10079590
440 Ga0207671_10027561
441 Ga0207693_10016120
442 Ga0207660_10008680
443 Ga0207662_10090238
444 Ga0207657_10001758
445 Ga0207657_10005088
446 Ga0207657_10009207
447 Ga0207649_10009710
448 Ga0207652_10010766
449 Ga0207652_10013540
450 Ga0207652_10020803
451 Ga0207652_10175067
452 Ga0207681_10032682
453 Ga0207694_10005684
454 Ga0207694_10162544
455 Ga0207650_10010294
456 Ga0207650_10016374
457 Ga0207650_10052445
458 Ga0207659_10085741
459 Ga0207659_10171090
460 Ga0207700_10000496
461 Ga0207664_10007958
462 Ga0207664_10052420
463 Ga0207664_10116052
464 Ga0207644_10030784
465 Ga0207690_10003076
466 Ga0207690_10005367
467 Ga0207706_10000850
468 Ga0207706_10013152
469 Ga0207691_10000706
470 Ga0207691_10001626
471 Ga0207691_10006315
472 Ga0207691_10009267
473 Ga0207691_10050957
474 Ga0207691_10071493
475 Ga0207689_10000307
476 Ga0207661_10062799
477 Ga0207679_10006783
478 Ga0207679_10046038
479 Ga0207667_10001211
480 Ga0207667_10066025
481 Ga0207667_10245320
482 Ga0207651_10131784
483 Ga0207640_10005124
484 Ga0207640_10090525
485 Ga0207658_10069145
486 Ga0207658_10079461
487 Ga0207677_10119876
488 Ga0207703_10014194
489 Ga0207703_10111927
490 Ga0207639_10018535
491 Ga0207639_10026952
492 Ga0207678_10003667
493 Ga0207678_10046042
494 Ga0207708_10015274
495 Ga0207702_10006099
496 Ga0207702_10007096
497 Ga0207702_10011161
498 Ga0207641_10014399
499 Ga0207641_10058307
500 Ga0207641_10109041
501 Ga0207648_10037770
502 Ga0207676_10010477
503 Ga0207676_10040718
504 Ga0207674_10000022
505 Ga0207674_10000273
506 Ga0207674_10010023
507 Ga0207674_10185194
508 Ga0207674_10195041
509 Ga0207675_100001001
510 Ga0207675_100050840
511 Ga0207683_10170285
512 Ga0207698_10002716
513 Ga0207698_10198098
514 Ga0209983_1003022
515 Ga0209971_1003229
516 Ga0209998_10003826
517 Ga0209974_10000965
518 Ga0268264_10141797
519 Ga0265330_10017228
520 Ga0307405_10008424
521 Ga0307413_10001534
522 Ga0307413_10078620
523 Ga0307410_10002451
524 Ga0307410_10003488
525 Ga0307412_10023524
526 Ga0307412_10051519
527 Ga0307409_100007113
528 Ga0307409_100042515
529 Ga0307416_100039504
530 Ga0307416_100048372
531 Ga0307414_10032853
532 Ga0307414_10055868
533 Ga0307411_10004789
534 Ga0373952_0000589
535 Ga0373960_0005502
536 Ga0395899_0000964
537 Ga0395899_0001192
538 Ga0395899_0177901
539 Ga0395900_0126240
540 Ga0395898_0116888
541 Ga0395905_0001030
542 Ga0395905_0008919
543 Ga0395905_0038413
544 Ga0395901_0073007
545 Ga0395901_0078699
546 Ga0395901_0224196
547 Ga0451577_0104633
548 Ga0466969_0038573
549 Ga0466972_0000034
550 Ga0466965_0041556
551 Ga0466964_0020726
552 Ga0466968_0001879
553 Ga0466959_0004041
554 Ga0466959_0088872
555 Ga0451576_0115752
556 Ga0495643_0005747
557 Ga0495642_0012210
558 Ga0495597_0026635
559 Ga0495661_0003998
560 Ga0495687_010920
561 Ga0495687_022528
562 Ga0496104_0174669
563 Ga0496110_0085640
564 Ga0496110_0110100
565 Ga0496113_0065674
566 nmdc:mga06r32_155965_c1
567 nmdc:mga08y16_41985_c1
568 Ga0500644_0011550
569 Ga0587077_000751
570 Ga0587076_000099
571 2644029105
572 639786892

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14401

RLAN

RimK-like ATPgrasp N-terminal domain

28

177

0.96

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

297

461

0.86

PF08443

RimK

RimK-like ATP-grasp domain

284

471

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5k2m-assembly2.cif.gz_D bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-aaa 0.8282 196 482
3vpd-assembly1.cif.gz_A-2 lysx from thermus thermophilus complexed with amp-pnp 0.8277 197 466
5k2m-assembly2.cif.gz_D bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-aaa 0.8196 196 482
3vpd-assembly1.cif.gz_B-2 lysx from thermus thermophilus complexed with amp-pnp 0.8171 197 486
5k2m-assembly1.cif.gz_A bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-aaa 0.8169 196 482
ID Description Score Start End Superfamily
1c3oA03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8807 299 363 3.30.1490.20
4mamA02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8539 288 362 3.30.1490.20
af_Q8C5H8_56_229_3.40.50.10330 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.8534 213 246 3.40.50.10330
5k2mB02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8518 300 363 3.30.1490.20
af_Q58881_123_195_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8356 299 361 3.30.1490.20
ID Description Score Start End GO Terms
AF-A0A7Z8PBI6-F1-model_v4 RimK family alpha-L-glutamate ligase 0.9854 202 488 GO:0005524
GO:0005737
GO:0009432
GO:0018169
GO:0046872
AF-A0A0A0D3J0-F1-model_v4 ATP-grasp domain-containing protein 0.9842 221 483 GO:0005524
GO:0005737
GO:0009432
GO:0018169
GO:0046872
AF-A0A536T6L3-F1-model_v4 RimK family alpha-L-glutamate ligase 0.9832 248 490 GO:0005524
GO:0005737
GO:0008716
GO:0009432
GO:0018169
GO:0046872
AF-A0A7X7NIP1-F1-model_v4 RimK family alpha-L-glutamate ligase 0.9819 317 481 GO:0005524
GO:0016874
AF-A0A352IPT0-F1-model_v4 RimK family alpha-L-glutamate ligase 0.9816 213 486 GO:0005524
GO:0005737
GO:0009432
GO:0018169
GO:0046872

Map