F386944

General Info

Members Datasets Scaffolds Average Seq Length
285 201 570 251

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0697641|Ga0436365_0697641_1173_2006
Length 277
Sequence VSDPAFIVVVPARYASSRFPGKPLAEIAGLPMVVQVAQRAAASGAERVIVATDDERIRDAASAYGVAAILTSTAHATGTDRLAEAVERLRLDDATIVVNVQGDEPLLSPALMREVAALLAAHPDAAIATACHRIDDAADAFNANVVKVVLDRARYALYFSRAPIPWARDAFASARDAIPPSVDMYRHYGLYAYRAGFLRTFPSLERAPIEAHEALEQLRALWHGYRIVVAIADAAPAPGVDTPEDLERVRALAHAALTKRGECGDNPSLSRAPNERA

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
86 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
87 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
130 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
139 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
140 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
141 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
142 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
143 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
144 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
145 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
146 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
147 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
148 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
149 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
150 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
151 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
152 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
153 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
154 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
155 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
156 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
159 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
185 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
186 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
187 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
188 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
192 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
193 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
194 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
195 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
196 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
197 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
198 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
199 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
200 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
201 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.6
Metatranscriptomes 0
Isolates 1.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 1.4
Rhizoplane 4.21
Rhizosphere 84.56
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0697641 3300039437 Bacteria 2497
2 JGI24740J21852_10048453 3300001979 Bacteria 1234
3 JGI25152J39213_1000508 3300002773 Bacteria 21693
4 rootH2_10080711 3300003320 Bacteria 6038
5 Ga0058692_1002130 3300003856 Bacteria 6828
6 Ga0058692_1005536 3300003856 Bacteria 3591
7 Ga0058692_1005703 3300003856 Bacteria 3517
8 Ga0065165_1004060 3300005262 Bacteria 9506
9 Ga0070676_10213740 3300005328 Bacteria 1270
10 Ga0070676_10266818 3300005328 Bacteria 1148
11 Ga0070690_100042244 3300005330 Bacteria 2887
12 Ga0070670_100157494 3300005331 Bacteria 1968
13 Ga0068869_100038775 3300005334 Bacteria 3399
14 Ga0068869_100342395 3300005334 Bacteria 1217
15 Ga0070666_10017801 3300005335 Bacteria 4559
16 Ga0070666_10111858 3300005335 Bacteria 1889
17 Ga0070680_100065443 3300005336 Bacteria 2979
18 Ga0070680_100119991 3300005336 Bacteria 2194
19 Ga0070682_100153960 3300005337 Bacteria 1581
20 Ga0070682_100456744 3300005337 Bacteria 980
21 Ga0068868_100068307 3300005338 Bacteria 2830
22 Ga0070691_10148782 3300005341 Bacteria 1199
23 Ga0070692_10034765 3300005345 Bacteria 2548
24 Ga0070669_100023045 3300005353 Bacteria 4457
25 Ga0070675_100118863 3300005354 Bacteria 2244
26 Ga0070675_100261742 3300005354 Bacteria 1516
27 Ga0070671_100059140 3300005355 Bacteria 3189
28 Ga0070671_100136985 3300005355 Bacteria 2064
29 Ga0070673_100037989 3300005364 Bacteria 3673
30 Ga0070659_100076845 3300005366 Bacteria 2662
31 Ga0070659_100132356 3300005366 Bacteria 2026
32 Ga0070667_100018398 3300005367 Bacteria 5795
33 Ga0070713_100275561 3300005436 Bacteria 1542
34 Ga0070701_10043058 3300005438 Bacteria 2308
35 Ga0070694_100114197 3300005444 Bacteria 1928
36 Ga0070694_100158481 3300005444 Bacteria 1659
37 Ga0070663_100345039 3300005455 Bacteria 1204
38 Ga0070678_100165150 3300005456 Bacteria 1798
39 Ga0070662_100105565 3300005457 Bacteria 2139
40 Ga0070681_10003284 3300005458 Bacteria 15096
41 Ga0070681_10165019 3300005458 Bacteria 2137
42 Ga0070681_10252030 3300005458 Bacteria 1678
43 Ga0068867_100160107 3300005459 Bacteria 1775
44 Ga0070706_100006169 3300005467 Bacteria 11339
45 Ga0070698_100193578 3300005471 Bacteria 1970
46 Ga0070679_100135597 3300005530 Bacteria 2443
47 Ga0070697_100190310 3300005536 Bacteria 1741
48 Ga0068853_100028731 3300005539 Bacteria 4680
49 Ga0070672_100742904 3300005543 Bacteria 861
50 Ga0070686_100326106 3300005544 Bacteria 1146
51 Ga0070696_100081100 3300005546 Bacteria 2298
52 Ga0070665_100028902 3300005548 Bacteria 5581
53 Ga0070704_100014320 3300005549 Bacteria 4952
54 Ga0070704_100049505 3300005549 Bacteria 2949
55 Ga0070704_100127350 3300005549 Bacteria 1967
56 Ga0068855_100117883 3300005563 Bacteria 3041
57 Ga0070664_100007865 3300005564 Bacteria 8612
58 Ga0068856_100078829 3300005614 Bacteria 3266
59 Ga0070702_100089784 3300005615 Bacteria 1861
60 Ga0068852_100232073 3300005616 Bacteria 1759
61 Ga0068852_100263401 3300005616 Bacteria 1656
62 Ga0068859_100044030 3300005617 Bacteria 4486
63 Ga0068859_100064475 3300005617 Bacteria 3696
64 Ga0068859_100426142 3300005617 Bacteria 1423
65 Ga0068864_100007975 3300005618 Bacteria 8728
66 Ga0068864_100430822 3300005618 Bacteria 1258
67 Ga0068861_100213737 3300005719 Bacteria 1626
68 Ga0068861_100575457 3300005719 Bacteria 1030
69 Ga0068870_10043485 3300005840 Bacteria 2343
70 Ga0068863_100021028 3300005841 Bacteria 6233
71 Ga0068863_100056162 3300005841 Bacteria 3728
72 Ga0068858_100004446 3300005842 Bacteria 13740
73 Ga0068858_100612214 3300005842 Bacteria 1057
74 Ga0068860_100021377 3300005843 Bacteria 6266
75 Ga0068862_100025162 3300005844 Bacteria 4997
76 Ga0068862_100119372 3300005844 Bacteria 2323
77 Ga0068862_100206914 3300005844 Bacteria 1771
78 Ga0081539_10000189 3300005985 Bacteria 143321
79 Ga0081539_10057151 3300005985 Bacteria 2161
80 Ga0097621_100064761 3300006237 Bacteria 3007
81 Ga0068871_100057763 3300006358 Bacteria 3157
82 Ga0075428_100000729 3300006844 Bacteria 34167
83 Ga0075430_100187261 3300006846 Bacteria 1721
84 Ga0075434_100637757 3300006871 Bacteria 1084
85 Ga0075429_100010098 3300006880 Bacteria 8181
86 Ga0068865_100068851 3300006881 Bacteria 2503
87 Ga0068865_100256770 3300006881 Bacteria 1382
88 Ga0075436_100145837 3300006914 Bacteria 1664
89 Ga0097620_100044029 3300006931 Bacteria 4486
90 Ga0097620_100064473 3300006931 Bacteria 3696
91 Ga0097620_100426111 3300006931 Bacteria 1423
92 Ga0079104_1000196 3300006946 Bacteria 84941
93 Ga0079104_1000402 3300006946 Bacteria 50102
94 Ga0075435_100612033 3300007076 Bacteria 945
95 Ga0105240_10127647 3300009093 Bacteria 3054
96 Ga0105240_10705251 3300009093 Bacteria 1101
97 Ga0111539_10044489 3300009094 Bacteria 5319
98 Ga0111539_10490757 3300009094 Bacteria 1430
99 Ga0111539_10962850 3300009094 Bacteria 992
100 Ga0111539_11025857 3300009094 Bacteria 959
101 Ga0105245_10028128 3300009098 Bacteria 4956
102 Ga0105245_10050746 3300009098 Bacteria 3719
103 Ga0105243_10678368 3300009148 Bacteria 1002
104 Ga0105248_10019901 3300009177 Bacteria 7431
105 Ga0105248_10105239 3300009177 Bacteria 3181
106 Ga0105238_10012954 3300009551 Bacteria 8418
107 Ga0105238_10123045 3300009551 Bacteria 2573
108 Ga0105239_10046259 3300010375 Bacteria 4768
109 Ga0105246_10029215 3300011119 Bacteria 3629
110 Ga0105246_10087005 3300011119 Bacteria 2242
111 Ga0157369_10032797 3300013105 Bacteria 5707
112 Ga0157369_10577358 3300013105 Bacteria 1161
113 Ga0157374_10104929 3300013296 Bacteria 2714
114 Ga0157374_10186956 3300013296 Bacteria 2025
115 Ga0157378_10065660 3300013297 Bacteria 3248
116 Ga0157378_10200112 3300013297 Bacteria 1889
117 Ga0163162_10006034 3300013306 Bacteria 11728
118 Ga0157372_10018415 3300013307 Bacteria 7506
119 Ga0157375_10458937 3300013308 Bacteria 1440
120 Ga0163163_10019235 3300014325 Bacteria 6411
121 Ga0157380_10038480 3300014326 Bacteria 3714
122 Ga0157380_10096199 3300014326 Bacteria 2454
123 Ga0157380_10351554 3300014326 Bacteria 1379
124 Ga0157380_10412395 3300014326 Bacteria 1285
125 Ga0157379_10043631 3300014968 Bacteria 4004
126 Ga0157379_10418004 3300014968 Bacteria 1234
127 Ga0157376_10224379 3300014969 Bacteria 1742
128 Ga0163161_10338643 3300017792 Bacteria 1193
129 Ga0207425_1019161 3300025245 Bacteria 1477
130 Ga0209129_1000018 3300025258 Bacteria 469298
131 Ga0209758_1013175 3300025297 Bacteria 4541
132 Ga0207710_10024427 3300025900 Bacteria 2603
133 Ga0207710_10095241 3300025900 Bacteria 1398
134 Ga0207680_10040168 3300025903 Bacteria 2720
135 Ga0207699_10337172 3300025906 Bacteria 1061
136 Ga0207643_10062600 3300025908 Bacteria 2126
137 Ga0207654_10081521 3300025911 Bacteria 1948
138 Ga0207707_10004760 3300025912 Bacteria 11903
139 Ga0207707_10053232 3300025912 Bacteria 3524
140 Ga0207695_10307983 3300025913 Bacteria 1474
141 Ga0207695_10513084 3300025913 Bacteria 1080
142 Ga0207663_10049963 3300025916 Bacteria 2597
143 Ga0207660_10062071 3300025917 Bacteria 2692
144 Ga0207660_10181844 3300025917 Bacteria 1633
145 Ga0207657_10212506 3300025919 Bacteria 1552
146 Ga0207652_10062511 3300025921 Bacteria 3218
147 Ga0207652_10115451 3300025921 Bacteria 2385
148 Ga0207646_10012415 3300025922 Bacteria 8189
149 Ga0207681_10047399 3300025923 Bacteria 2895
150 Ga0207694_10142425 3300025924 Bacteria 1928
151 Ga0207650_10340768 3300025925 Bacteria 1231
152 Ga0207687_10131426 3300025927 Bacteria 1888
153 Ga0207687_10232781 3300025927 Bacteria 1456
154 Ga0207700_10389621 3300025928 Bacteria 1220
155 Ga0207644_10461085 3300025931 Bacteria 1045
156 Ga0207709_10423325 3300025935 Bacteria 1023
157 Ga0207669_10530755 3300025937 Bacteria 946
158 Ga0207704_10172080 3300025938 Bacteria 1555
159 Ga0207691_10657864 3300025940 Bacteria 885
160 Ga0207711_10010671 3300025941 Bacteria 7638
161 Ga0207689_10001926 3300025942 Bacteria 19634
162 Ga0207689_10059859 3300025942 Bacteria 3132
163 Ga0207667_10105587 3300025949 Bacteria 2906
164 Ga0207651_10050954 3300025960 Bacteria 2815
165 Ga0207712_10354920 3300025961 Bacteria 1220
166 Ga0207668_10006166 3300025972 Bacteria 7071
167 Ga0207658_10076132 3300025986 Bacteria 2555
168 Ga0207677_10134050 3300026023 Bacteria 1885
169 Ga0207703_10116969 3300026035 Bacteria 2283
170 Ga0207639_10012039 3300026041 Bacteria 6018
171 Ga0207678_10063069 3300026067 Bacteria 3185
172 Ga0207678_10113559 3300026067 Bacteria 2311
173 Ga0207708_10301484 3300026075 Bacteria 1303
174 Ga0207702_10097476 3300026078 Bacteria 2588
175 Ga0207641_10096265 3300026088 Bacteria 2599
176 Ga0207641_10310620 3300026088 Bacteria 1492
177 Ga0207648_10036852 3300026089 Bacteria 4308
178 Ga0207676_10070256 3300026095 Bacteria 2807
179 Ga0207675_100053320 3300026118 Bacteria 3773
180 Ga0207675_100101336 3300026118 Bacteria 2713
181 Ga0207675_100289165 3300026118 Bacteria 1594
182 Ga0207675_100434535 3300026118 Bacteria 1298
183 Ga0207683_10166420 3300026121 Bacteria 1995
184 Ga0207683_10735193 3300026121 Bacteria 915
185 Ga0207698_10262765 3300026142 Bacteria 1587
186 Ga0209281_1000100 3300027111 Bacteria 223560
187 Ga0209281_1000114 3300027111 Bacteria 210536
188 Ga0209371_1000086 3300027312 Bacteria 175099
189 Ga0209371_1004887 3300027312 Bacteria 5595
190 Ga0209371_1006821 3300027312 Bacteria 4131
191 Ga0209966_1007597 3300027695 Bacteria 1905
192 Ga0207428_10032588 3300027907 Bacteria 4284
193 Ga0268266_10000043 3300028379 Bacteria 316604
194 Ga0268266_10021476 3300028379 Bacteria 5499
195 Ga0268265_10277723 3300028380 Bacteria 1497
196 Ga0268264_10318980 3300028381 Bacteria 1469
197 Ga0268264_10403031 3300028381 Bacteria 1315
198 Ga0268256_1000003 3300030500 Bacteria 1289401
199 Ga0268256_1003951 3300030500 Bacteria 6395
200 Ga0268256_1004673 3300030500 Bacteria 5595
201 Ga0307513_10004416 3300031456 Bacteria 18779
202 Ga0316579_10018447 3300031691 Bacteria 3072
203 Ga0316578_10079744 3300031728 Bacteria 1947
204 Ga0316578_10112787 3300031728 Bacteria 1633
205 Ga0307405_10242856 3300031731 Bacteria 1335
206 Ga0307413_10396243 3300031824 Bacteria 1080
207 Ga0307412_10097158 3300031911 Bacteria 2075
208 Ga0307409_100640896 3300031995 Bacteria 1055
209 Ga0307416_100176181 3300032002 Bacteria 1998
210 Ga0307411_10312964 3300032005 Bacteria 1264
211 Ga0316583_10044519 3300032133 Bacteria 1568
212 Ga0373939_0042930 3300035114 Bacteria 1370
213 Ga0373955_0149707 3300035172 Bacteria 1373
214 Ga0316574_0286259 3300035398 Bacteria 1049
215 Ga0316574_0302945 3300035398 Unclassified 1016
216 Ga0373933_0089046 3300035724 Bacteria 1902
217 Ga0373937_0005402 3300036401 Bacteria 10934
218 Ga0373937_0019110 3300036401 Bacteria 6132
219 Ga0373937_0050902 3300036401 Bacteria 3796
220 Ga0316582_0004987 3300036647 Bacteria 6785
221 Ga0316584_0013280 3300036712 Bacteria 5826
222 Ga0316581_0060060 3300037588 Bacteria 1166
223 Ga0439452_000003 3300042010 Bacteria 942815
224 Ga0439452_000008 3300042010 Bacteria 569877
225 Ga0451577_0028878 3300042876 Bacteria 5016
226 Ga0451577_0081546 3300042876 Bacteria 2886
227 Ga0451576_0003237 3300045051 Bacteria 22653
228 Ga0495603_0090695 3300046455 Bacteria 1787
229 Ga0496100_0159909 3300048903 Bacteria 1614
230 Ga0496101_0037385 3300048904 Bacteria 3444
231 Ga0496102_0404207 3300048905 Bacteria 1284
232 Ga0496104_0267511 3300048907 Bacteria 1622
233 Ga0496108_0194412 3300048911 Bacteria 1759
234 Ga0496108_0281715 3300048911 Bacteria 1447
235 Ga0496109_0152725 3300048912 Bacteria 2162
236 Ga0496109_0735314 3300048912 Bacteria 924
237 Ga0496112_0005974 3300048915 Bacteria 10621
238 Ga0496112_0012599 3300048915 Bacteria 7771
239 Ga0496113_0119307 3300048916 Bacteria 2061
240 Ga0496114_0066979 3300048917 Bacteria 3011
241 Ga0496116_0102949 3300048919 Bacteria 1700
242 Ga0496117_0022427 3300048920 Bacteria 5063
243 Ga0496117_0061971 3300048920 Bacteria 2566
244 Ga0496118_0006332 3300048921 Bacteria 13072
245 Ga0496118_0028396 3300048921 Bacteria 4711
246 Ga0496119_0000008 3300048922 Bacteria 446822
247 Ga0496120_0004359 3300048923 Bacteria 11937
248 Ga0496120_0031283 3300048923 Bacteria 3224
249 Ga0496122_0055303 3300048925 Bacteria 2970
250 Ga0496122_0153484 3300048925 Bacteria 1417
251 Ga0496122_0240150 3300048925 Bacteria 1022
252 Ga0496123_0004368 3300048926 Bacteria 14922
253 Ga0496123_0186360 3300048926 Bacteria 1078
254 Ga0496124_0000101 3300048927 Bacteria 180325
255 Ga0496124_0006857 3300048927 Bacteria 12266
256 Ga0496126_0014961 3300048929 Bacteria 7821
257 Ga0496126_0046578 3300048929 Bacteria 3975
258 Ga0501032_0334547 3300049569 Bacteria 976
259 Ga0501034_0005270 3300049571 Bacteria 14188
260 Ga0501036_0365436 3300049572 Bacteria 1205
261 Ga0501042_0539920 3300049578 Bacteria 847
262 Ga0501048_0145385 3300049582 Bacteria 1677
263 Ga0501071_0199096 3300049587 Bacteria 1504
264 Ga0501072_0048325 3300049588 Bacteria 3350
265 Ga0501074_0256954 3300049590 Bacteria 1242
266 Ga0501075_0196863 3300049591 Bacteria 1537
267 Ga0501076_0215130 3300049592 Bacteria 1571
268 Ga0501076_0619926 3300049592 Bacteria 892
269 Ga0501081_0099279 3300049743 Bacteria 2057
270 Ga0501044_0000112 3300049823 Bacteria 98748
271 nmdc:mga09592_107245_c1 3300050508 Bacteria 2396
272 nmdc:mga0qj67_36311_c1 3300050509 Bacteria 3855
273 nmdc:mga08y16_29234_c1 3300050511 Bacteria 5808
274 nmdc:mga08y16_457314_c1 3300050511 Bacteria 1301
275 nmdc:mga08y16_755800_c1 3300050511 Bacteria 968
276 nmdc:mga0n895_605320_c1 3300050512 Bacteria 1098
277 nmdc:mga0rr50_448796_c1 3300050513 Bacteria 1093
278 Ga0495601_0113634 3300053077 Bacteria 1755
279 Ga0500641_0041838 3300053096 Bacteria 1854
280 Ga0500600_0003558 3300053149 Eukaryota 9028
281 Ga0590075_067301 3300059424 Bacteria 924
282 2935627243 2935625433 Bacteria 5042964
283 2939618971 2939617950 Bacteria 4820956
284 2974437838 2974435778 Bacteria 4876478
285 8019505855 8019504834 Bacteria 4819156
286 Ga0436365_0697641
287 JGI24740J21852_10048453
288 JGI25152J39213_1000508
289 rootH2_10080711
290 Ga0058692_1002130
291 Ga0058692_1005536
292 Ga0058692_1005703
293 Ga0065165_1004060
294 Ga0070676_10213740
295 Ga0070676_10266818
296 Ga0070690_100042244
297 Ga0070670_100157494
298 Ga0068869_100038775
299 Ga0068869_100342395
300 Ga0070666_10017801
301 Ga0070666_10111858
302 Ga0070680_100065443
303 Ga0070680_100119991
304 Ga0070682_100153960
305 Ga0070682_100456744
306 Ga0068868_100068307
307 Ga0070691_10148782
308 Ga0070692_10034765
309 Ga0070669_100023045
310 Ga0070675_100118863
311 Ga0070675_100261742
312 Ga0070671_100059140
313 Ga0070671_100136985
314 Ga0070673_100037989
315 Ga0070659_100076845
316 Ga0070659_100132356
317 Ga0070667_100018398
318 Ga0070713_100275561
319 Ga0070701_10043058
320 Ga0070694_100114197
321 Ga0070694_100158481
322 Ga0070663_100345039
323 Ga0070678_100165150
324 Ga0070662_100105565
325 Ga0070681_10003284
326 Ga0070681_10165019
327 Ga0070681_10252030
328 Ga0068867_100160107
329 Ga0070706_100006169
330 Ga0070698_100193578
331 Ga0070679_100135597
332 Ga0070697_100190310
333 Ga0068853_100028731
334 Ga0070672_100742904
335 Ga0070686_100326106
336 Ga0070696_100081100
337 Ga0070665_100028902
338 Ga0070704_100014320
339 Ga0070704_100049505
340 Ga0070704_100127350
341 Ga0068855_100117883
342 Ga0070664_100007865
343 Ga0068856_100078829
344 Ga0070702_100089784
345 Ga0068852_100232073
346 Ga0068852_100263401
347 Ga0068859_100044030
348 Ga0068859_100064475
349 Ga0068859_100426142
350 Ga0068864_100007975
351 Ga0068864_100430822
352 Ga0068861_100213737
353 Ga0068861_100575457
354 Ga0068870_10043485
355 Ga0068863_100021028
356 Ga0068863_100056162
357 Ga0068858_100004446
358 Ga0068858_100612214
359 Ga0068860_100021377
360 Ga0068862_100025162
361 Ga0068862_100119372
362 Ga0068862_100206914
363 Ga0081539_10000189
364 Ga0081539_10057151
365 Ga0097621_100064761
366 Ga0068871_100057763
367 Ga0075428_100000729
368 Ga0075430_100187261
369 Ga0075434_100637757
370 Ga0075429_100010098
371 Ga0068865_100068851
372 Ga0068865_100256770
373 Ga0075436_100145837
374 Ga0097620_100044029
375 Ga0097620_100064473
376 Ga0097620_100426111
377 Ga0079104_1000196
378 Ga0079104_1000402
379 Ga0075435_100612033
380 Ga0105240_10127647
381 Ga0105240_10705251
382 Ga0111539_10044489
383 Ga0111539_10490757
384 Ga0111539_10962850
385 Ga0111539_11025857
386 Ga0105245_10028128
387 Ga0105245_10050746
388 Ga0105243_10678368
389 Ga0105248_10019901
390 Ga0105248_10105239
391 Ga0105238_10012954
392 Ga0105238_10123045
393 Ga0105239_10046259
394 Ga0105246_10029215
395 Ga0105246_10087005
396 Ga0157369_10032797
397 Ga0157369_10577358
398 Ga0157374_10104929
399 Ga0157374_10186956
400 Ga0157378_10065660
401 Ga0157378_10200112
402 Ga0163162_10006034
403 Ga0157372_10018415
404 Ga0157375_10458937
405 Ga0163163_10019235
406 Ga0157380_10038480
407 Ga0157380_10096199
408 Ga0157380_10351554
409 Ga0157380_10412395
410 Ga0157379_10043631
411 Ga0157379_10418004
412 Ga0157376_10224379
413 Ga0163161_10338643
414 Ga0207425_1019161
415 Ga0209129_1000018
416 Ga0209758_1013175
417 Ga0207710_10024427
418 Ga0207710_10095241
419 Ga0207680_10040168
420 Ga0207699_10337172
421 Ga0207643_10062600
422 Ga0207654_10081521
423 Ga0207707_10004760
424 Ga0207707_10053232
425 Ga0207695_10307983
426 Ga0207695_10513084
427 Ga0207663_10049963
428 Ga0207660_10062071
429 Ga0207660_10181844
430 Ga0207657_10212506
431 Ga0207652_10062511
432 Ga0207652_10115451
433 Ga0207646_10012415
434 Ga0207681_10047399
435 Ga0207694_10142425
436 Ga0207650_10340768
437 Ga0207687_10131426
438 Ga0207687_10232781
439 Ga0207700_10389621
440 Ga0207644_10461085
441 Ga0207709_10423325
442 Ga0207669_10530755
443 Ga0207704_10172080
444 Ga0207691_10657864
445 Ga0207711_10010671
446 Ga0207689_10001926
447 Ga0207689_10059859
448 Ga0207667_10105587
449 Ga0207651_10050954
450 Ga0207712_10354920
451 Ga0207668_10006166
452 Ga0207658_10076132
453 Ga0207677_10134050
454 Ga0207703_10116969
455 Ga0207639_10012039
456 Ga0207678_10063069
457 Ga0207678_10113559
458 Ga0207708_10301484
459 Ga0207702_10097476
460 Ga0207641_10096265
461 Ga0207641_10310620
462 Ga0207648_10036852
463 Ga0207676_10070256
464 Ga0207675_100053320
465 Ga0207675_100101336
466 Ga0207675_100289165
467 Ga0207675_100434535
468 Ga0207683_10166420
469 Ga0207683_10735193
470 Ga0207698_10262765
471 Ga0209281_1000100
472 Ga0209281_1000114
473 Ga0209371_1000086
474 Ga0209371_1004887
475 Ga0209371_1006821
476 Ga0209966_1007597
477 Ga0207428_10032588
478 Ga0268266_10000043
479 Ga0268266_10021476
480 Ga0268265_10277723
481 Ga0268264_10318980
482 Ga0268264_10403031
483 Ga0268256_1000003
484 Ga0268256_1003951
485 Ga0268256_1004673
486 Ga0307513_10004416
487 Ga0316579_10018447
488 Ga0316578_10079744
489 Ga0316578_10112787
490 Ga0307405_10242856
491 Ga0307413_10396243
492 Ga0307412_10097158
493 Ga0307409_100640896
494 Ga0307416_100176181
495 Ga0307411_10312964
496 Ga0316583_10044519
497 Ga0373939_0042930
498 Ga0373955_0149707
499 Ga0316574_0286259
500 Ga0316574_0302945
501 Ga0373933_0089046
502 Ga0373937_0005402
503 Ga0373937_0019110
504 Ga0373937_0050902
505 Ga0316582_0004987
506 Ga0316584_0013280
507 Ga0316581_0060060
508 Ga0439452_000003
509 Ga0439452_000008
510 Ga0451577_0028878
511 Ga0451577_0081546
512 Ga0451576_0003237
513 Ga0495603_0090695
514 Ga0496100_0159909
515 Ga0496101_0037385
516 Ga0496102_0404207
517 Ga0496104_0267511
518 Ga0496108_0194412
519 Ga0496108_0281715
520 Ga0496109_0152725
521 Ga0496109_0735314
522 Ga0496112_0005974
523 Ga0496112_0012599
524 Ga0496113_0119307
525 Ga0496114_0066979
526 Ga0496116_0102949
527 Ga0496117_0022427
528 Ga0496117_0061971
529 Ga0496118_0006332
530 Ga0496118_0028396
531 Ga0496119_0000008
532 Ga0496120_0004359
533 Ga0496120_0031283
534 Ga0496122_0055303
535 Ga0496122_0153484
536 Ga0496122_0240150
537 Ga0496123_0004368
538 Ga0496123_0186360
539 Ga0496124_0000101
540 Ga0496124_0006857
541 Ga0496126_0014961
542 Ga0496126_0046578
543 Ga0501032_0334547
544 Ga0501034_0005270
545 Ga0501036_0365436
546 Ga0501042_0539920
547 Ga0501048_0145385
548 Ga0501071_0199096
549 Ga0501072_0048325
550 Ga0501074_0256954
551 Ga0501075_0196863
552 Ga0501076_0215130
553 Ga0501076_0619926
554 Ga0501081_0099279
555 Ga0501044_0000112
556 nmdc:mga09592_107245_c1
557 nmdc:mga0qj67_36311_c1
558 nmdc:mga08y16_29234_c1
559 nmdc:mga08y16_457314_c1
560 nmdc:mga08y16_755800_c1
561 nmdc:mga0n895_605320_c1
562 nmdc:mga0rr50_448796_c1
563 Ga0495601_0113634
564 Ga0500641_0041838
565 Ga0500600_0003558
566 Ga0590075_067301
567 2935627243
568 2939618971
569 2974437838
570 8019505855

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02348

CTP_transf_3

Cytidylyltransferase

7

227

0.98

PF12804

NTP_transf_3

MobA-like NTP transferase domain

13

256

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vh1-assembly1.cif.gz_D crystal structure of cmp-kdo synthetase 0.9699 8 254
3oam-assembly2.cif.gz_D crystal structure of cytidylyltransferase from vibrio cholerae 0.9683 8 257
8ees-assembly1.cif.gz_B crystal structure of 3-deoxy-manno-octulosonate cytidylyltransferase from klebsiella pneumoniae 0.9682 8 234
4xwi-assembly1.cif.gz_A x-ray crystal structure of cmp-kdo synthase from pseudomonas aeruginosa 0.9647 6 257
3jtj-assembly1.cif.gz_A-2 3-deoxy-manno-octulosonate cytidylyltransferase from yersinia pestis 0.9629 8 258
ID Description Score Start End Superfamily
3k8eD00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9572 8 254 3.90.550.10
3k8eD00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9494 8 254 3.90.550.10
1h7eA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9261 6 258 3.90.550.10
4fcuA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9203 9 252 3.90.550.10
2y6pC00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9133 9 255 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A3D4TN10-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase 0.9922 22 213 GO:0005829
GO:0008690
GO:0009103
AF-A0A2J0UFF2-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9919 7 258 GO:0005829
GO:0008690
GO:0009103
GO:0033468
AF-A0A2J1D472-F1-model_v4 deleted 0.9898 106 208
AF-A0A4R3N0Z8-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9895 1 258 GO:0005829
GO:0008690
GO:0009103
GO:0033468
AF-B4SQQ0-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9893 7 258 GO:0005829
GO:0008690
GO:0009103
GO:0033468

Map