F386496

General Info

Members Datasets Scaffolds Average Seq Length
284 209 568 637

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2868088558|2868090515
Length 759
Sequence PIPAPADSGACCHTVATVQSREGVASDGSVPRGDTDGDRRRVLGPGREPHPLDPLSAAEIEQATRILGDAGVMSGSARIAYLGLDEPHKREVLAFEEGIFTPGDDAHSVENGMAGDPQTQGDQRRWGRRIPGQGSARASAWEEGSDDLAAGEAENSPSPPLLAPANLSESRPSRRARAFVIDLATEASEEVVVSLTDRRVEARRPIDPAVDGQVPMLDEEHALVRRVVRADDAWVEALERRGITDMETVYVAALTAGYFDRPDEHGRRIARVLAHLQPTPESLPWAHPIDGLVAYVDLTKETVLEVVDTGALPIPEESGDYHVPGVFGSHRTSQRPIEITQPEGPSFQIEDNLVTWENWSVRLGYDMREGLVLHRLGFDDDGRRRPIIYRASVAEMVVPYGDPSAVRFWQNYFDTGEYQLGRLANSLELGCDCLGEITYFDVTVVNDDGSPRVIRNAICMHEEDYGVLWKHTDPANGSVETRRQRRLVISFFVTVGNYDYGFYWYLYLDGTIELEVKATGIVFTGAYDERAQRYASEVAPGLAAPYHQHLFGARLDMAVDGMQNAVDEVDVVPLPHGDDNPYGSAFAQAVTRLRTEREGRRVADNSIDRVWRVNNPSVRNRFGQPVAYVLYPEGKSTLLAGETSSIRRRAAFATKHLWVTPYHPAERYPAGDLVNQHPGGAGLPAYTEADRDIDGQDVVLWHTFGLTHFPRPEDWPIMPVDTCGFTLKPVGFFDRNPTVDVPPSARHCASAGNDTCHCS

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
83 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
88 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
90 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
91 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
121 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
126 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
127 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
148 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
153 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
193 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
194 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
197 2643221576 Nocardioides sp. Root614 Isolate Unclassified
198 2643221590 Nocardioides sp. Root682 Isolate Unclassified
199 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
200 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
201 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
202 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
203 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
204 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
205 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
206 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
207 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
208 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
209 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.37
Metatranscriptomes 0.35
Isolates 5.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0
Rhizoplane 7.04
Rhizosphere 75.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10017464 3300001979 Bacteria 2566
2 rootH2_10015581 3300003320 Bacteria 7598
3 Ga0055527_1000005 3300003760 Bacteria 504776
4 Ga0055542_1000006 3300003762 Bacteria 504776
5 Ga0055529_1000013 3300003763 Bacteria 373267
6 Ga0055540_1000022 3300003792 Bacteria 201257
7 Ga0070658_10004928 3300005327 Bacteria 10880
8 Ga0070658_10141716 3300005327 Bacteria 2008
9 Ga0070683_100059264 3300005329 Bacteria 3556
10 Ga0070683_100059811 3300005329 Bacteria 3540
11 Ga0070666_10016080 3300005335 Bacteria 4782
12 Ga0070666_10029569 3300005335 Bacteria 3602
13 Ga0070660_100034273 3300005339 Bacteria 3834
14 Ga0070660_100066132 3300005339 Bacteria 2814
15 Ga0070661_100106963 3300005344 Bacteria 2086
16 Ga0070668_100004430 3300005347 Bacteria 10425
17 Ga0070669_100013327 3300005353 Bacteria 5844
18 Ga0070667_100000333 3300005367 Bacteria 52478
19 Ga0070667_100000443 3300005367 Bacteria 43082
20 Ga0070714_100011055 3300005435 Bacteria 7150
21 Ga0070714_100039610 3300005435 Bacteria 3968
22 Ga0070714_100128141 3300005435 Bacteria 2265
23 Ga0070713_100016192 3300005436 Bacteria 5604
24 Ga0070708_100005758 3300005445 Bacteria 9835
25 Ga0070708_100008249 3300005445 Bacteria 8364
26 Ga0070663_100001580 3300005455 Bacteria 12532
27 Ga0070681_10035419 3300005458 Bacteria 5014
28 Ga0070706_100024379 3300005467 Bacteria 5569
29 Ga0070706_100041056 3300005467 Bacteria 4271
30 Ga0070707_100037281 3300005468 Bacteria 4639
31 Ga0070698_100012653 3300005471 Bacteria 8935
32 Ga0070699_100000840 3300005518 Bacteria 28493
33 Ga0070697_100002040 3300005536 Bacteria 15475
34 Ga0070665_100021155 3300005548 Bacteria 6540
35 Ga0068855_100007930 3300005563 Bacteria 12831
36 Ga0068852_100000260 3300005616 Bacteria 35545
37 Ga0068859_100002932 3300005617 Bacteria 17327
38 Ga0068863_100000946 3300005841 Bacteria 29147
39 Ga0068860_100000160 3300005843 Bacteria 110266
40 Ga0068862_100000131 3300005844 Bacteria 87720
41 Ga0081540_1000591 3300005983 Bacteria 34907
42 Ga0075369_10026476 3300006186 Bacteria 2417
43 Ga0097620_100002932 3300006931 Bacteria 17327
44 Ga0105247_10000078 3300009101 Bacteria 110404
45 Ga0105241_10001645 3300009174 Bacteria 17032
46 Ga0105242_10129337 3300009176 Bacteria 2177
47 Ga0105248_10000082 3300009177 Bacteria 110759
48 Ga0105248_10093600 3300009177 Bacteria 3384
49 Ga0105237_10031907 3300009545 Bacteria 5335
50 Ga0105249_10000031 3300009553 Bacteria 220006
51 Ga0157369_10126564 3300013105 Bacteria 2708
52 Ga0163163_10049004 3300014325 Bacteria 4156
53 Ga0213875_10000581 3300021388 Bacteria 29658
54 Ga0213875_10000833 3300021388 Bacteria 22909
55 Ga0224712_10018045 3300022467 Bacteria 2352
56 Ga0209672_100003 3300025228 Bacteria 1560476
57 Ga0209147_101215 3300025229 Bacteria 10304
58 Ga0209258_100804 3300025242 Bacteria 18383
59 Ga0209148_1000004 3300025254 Bacteria 1844481
60 Ga0209455_1000022 3300025272 Bacteria 688910
61 Ga0209051_1000033 3300025303 Bacteria 380540
62 Ga0209051_1004531 3300025303 Bacteria 8516
63 Ga0207653_10003535 3300025885 Bacteria 4922
64 Ga0207710_10000022 3300025900 Bacteria 335632
65 Ga0207647_10002116 3300025904 Bacteria 15179
66 Ga0207645_10029468 3300025907 Bacteria 3538
67 Ga0207643_10016381 3300025908 Bacteria 4044
68 Ga0207705_10003394 3300025909 Bacteria 12110
69 Ga0207684_10006538 3300025910 Bacteria 10616
70 Ga0207684_10033154 3300025910 Bacteria 4393
71 Ga0207684_10034349 3300025910 Bacteria 4309
72 Ga0207684_10060933 3300025910 Bacteria 3205
73 Ga0207671_10000692 3300025914 Bacteria 43592
74 Ga0207671_10015699 3300025914 Bacteria 5919
75 Ga0207662_10006674 3300025918 Bacteria 6238
76 Ga0207657_10006536 3300025919 Bacteria 12073
77 Ga0207681_10006790 3300025923 Bacteria 7018
78 Ga0207694_10003545 3300025924 Bacteria 12395
79 Ga0207664_10001463 3300025929 Bacteria 15509
80 Ga0207664_10023590 3300025929 Bacteria 4612
81 Ga0207665_10018680 3300025939 Bacteria 4555
82 Ga0207665_10029337 3300025939 Bacteria 3637
83 Ga0207691_10018022 3300025940 Bacteria 6685
84 Ga0207711_10000114 3300025941 Bacteria 84146
85 Ga0207689_10007992 3300025942 Bacteria 9240
86 Ga0207667_10013702 3300025949 Bacteria 9266
87 Ga0207712_10000029 3300025961 Bacteria 220014
88 Ga0207668_10001785 3300025972 Bacteria 12559
89 Ga0207658_10000241 3300025986 Bacteria 57251
90 Ga0207658_10000253 3300025986 Bacteria 55910
91 Ga0207678_10000313 3300026067 Bacteria 43785
92 Ga0207678_10010636 3300026067 Bacteria 8083
93 Ga0207678_10034090 3300026067 Bacteria 4434
94 Ga0207678_10049403 3300026067 Bacteria 3635
95 Ga0207641_10001454 3300026088 Bacteria 23237
96 Ga0207674_10009615 3300026116 Bacteria 11030
97 Ga0207674_10073681 3300026116 Bacteria 3427
98 Ga0207683_10062453 3300026121 Bacteria 3280
99 Ga0207698_10000078 3300026142 Bacteria 65050
100 Ga0268266_10015282 3300028379 Bacteria 6589
101 Ga0268265_10000040 3300028380 Bacteria 194156
102 Ga0268264_10000017 3300028381 Bacteria 498037
103 Ga0307515_10092361 3300028794 Bacteria 3768
104 Ga0265338_10001588 3300028800 Bacteria 36478
105 Ga0307511_10000221 3300030521 Bacteria 57496
106 Ga0307512_10003261 3300030522 Bacteria 19129
107 Ga0307512_10028901 3300030522 Bacteria 4850
108 Ga0265327_10002001 3300031251 Bacteria 23041
109 Ga0307513_10008235 3300031456 Bacteria 13372
110 Ga0307414_10004913 3300032004 Bacteria 7308
111 Ga0373926_0003645 3300035083 Bacteria 5000
112 Ga0373926_0006737 3300035083 Bacteria 3816
113 Ga0373936_0001945 3300035113 Bacteria 7638
114 Ga0373941_0006723 3300035115 Bacteria 2782
115 Ga0373945_0000293 3300035116 Bacteria 14176
116 Ga0373945_0004281 3300035116 Bacteria 4530
117 Ga0373953_0007152 3300035117 Bacteria 3723
118 Ga0373954_0018184 3300035118 Bacteria 3162
119 Ga0373957_0013641 3300035120 Bacteria 2761
120 Ga0373957_0024166 3300035120 Bacteria 2180
121 Ga0373943_0000100 3300035170 Bacteria 31820
122 Ga0373946_0004256 3300035171 Bacteria 5113
123 Ga0373946_0010488 3300035171 Bacteria 3430
124 Ga0373955_0024093 3300035172 Bacteria 3108
125 Ga0373924_0000740 3300035410 Bacteria 10178
126 Ga0373935_0036882 3300035692 Bacteria 3058
127 Ga0373927_0035245 3300035695 Bacteria 3254
128 Ga0373933_0011285 3300035724 Bacteria 4919
129 Ga0373933_0060837 3300035724 Bacteria 2277
130 Ga0373947_0008645 3300035725 Bacteria 5859
131 Ga0373925_0000013 3300037068 Bacteria 188673
132 Ga0373925_0001808 3300037068 Bacteria 17850
133 Ga0373925_0005882 3300037068 Bacteria 9090
134 Ga0373925_0032355 3300037068 Bacteria 3850
135 Ga0395898_0165198 3300037466 Bacteria 2117
136 Ga0436364_0270774 3300037853 Bacteria 22368
137 Ga0436364_0658848 3300037853 Bacteria 108122
138 Ga0439461_0001194 3300041410 Bacteria 3970
139 Ga0439465_0000485 3300041413 Bacteria 11810
140 Ga0439465_0010163 3300041413 Bacteria 2958
141 Ga0466972_0025058 3300044658 Bacteria 2959
142 Ga0466961_0008120 3300044693 Bacteria 6683
143 Ga0466961_0010078 3300044693 Bacteria 6021
144 Ga0466963_0030889 3300044694 Bacteria 3460
145 Ga0466964_0010951 3300044706 Bacteria 3427
146 Ga0466968_0000916 3300044735 Bacteria 10385
147 Ga0466957_0017428 3300044842 Bacteria 4206
148 Ga0466960_0008591 3300044901 Bacteria 4186
149 Ga0466960_0026332 3300044901 Bacteria 2641
150 Ga0495629_0001482 3300046459 Bacteria 18496
151 Ga0495638_0000438 3300046460 Bacteria 50230
152 Ga0495641_0020696 3300046461 Bacteria 3327
153 Ga0495651_0002176 3300046462 Bacteria 15157
154 Ga0495651_0003174 3300046462 Bacteria 12634
155 Ga0495651_0011407 3300046462 Bacteria 6828
156 Ga0495651_0044270 3300046462 Bacteria 3450
157 Ga0495653_0002535 3300046463 Bacteria 14553
158 Ga0495580_0011650 3300046472 Bacteria 6799
159 Ga0495639_0003946 3300046475 Bacteria 6374
160 Ga0495662_0003243 3300046476 Bacteria 8220
161 Ga0495662_0048204 3300046476 Bacteria 2057
162 Ga0495664_0003232 3300046477 Bacteria 8850
163 Ga0495664_0010398 3300046477 Bacteria 5219
164 Ga0495594_0009946 3300046499 Bacteria 4924
165 Ga0495606_0013608 3300046507 Bacteria 6416
166 Ga0495608_0003512 3300046511 Bacteria 11236
167 Ga0495618_0040286 3300046514 Bacteria 2939
168 Ga0495666_0010825 3300046526 Bacteria 4548
169 Ga0495652_0019885 3300046529 Bacteria 5973
170 Ga0495665_0020525 3300046531 Bacteria 3547
171 Ga0495665_0052411 3300046531 Bacteria 2159
172 Ga0495640_0010648 3300046533 Bacteria 7095
173 Ga0495640_0057263 3300046533 Bacteria 2661
174 Ga0495587_0036353 3300046536 Bacteria 2962
175 Ga0495645_0033327 3300046543 Bacteria 3757
176 Ga0495645_0089344 3300046543 Bacteria 2203
177 Ga0495667_0004261 3300046559 Bacteria 9641
178 Ga0495667_0039391 3300046559 Bacteria 3142
179 Ga0495667_0040893 3300046559 Bacteria 3076
180 Ga0495668_0003660 3300046616 Bacteria 11355
181 Ga0495625_0002423 3300046660 Bacteria 20200
182 Ga0495635_0012677 3300046663 Bacteria 5913
183 Ga0495588_0011702 3300046674 Bacteria 4124
184 Ga0495657_0003119 3300046675 Bacteria 13681
185 Ga0495657_0021145 3300046675 Bacteria 4670
186 Ga0495623_0040259 3300046679 Bacteria 2984
187 Ga0495646_0025051 3300046680 Bacteria 3753
188 Ga0495647_0002441 3300046681 Bacteria 5860
189 Ga0495658_0002166 3300046683 Bacteria 9941
190 Ga0495624_0030976 3300046690 Bacteria 3481
191 Ga0495600_0001512 3300046809 Bacteria 12904
192 Ga0495600_0050225 3300046809 Bacteria 2721
193 Ga0495581_0008374 3300047315 Bacteria 5994
194 Ga0495604_0008388 3300047317 Bacteria 8171
195 Ga0495604_0080772 3300047317 Bacteria 2435
196 Ga0495676_0021741 3300047321 Bacteria 5594
197 Ga0495680_0002083 3300047322 Bacteria 20810
198 Ga0495680_0039626 3300047322 Bacteria 3756
199 Ga0495675_0044589 3300047444 Bacteria 2825
200 Ga0495684_0004766 3300047471 Bacteria 10601
201 Ga0495684_0012394 3300047471 Bacteria 6573
202 Ga0495684_0020462 3300047471 Bacteria 5099
203 Ga0495593_0035856 3300047673 Bacteria 2690
204 Ga0495614_0013014 3300048089 Bacteria 3647
205 Ga0495626_0000168 3300048091 Bacteria 81033
206 Ga0496100_0001192 3300048903 Bacteria 12614
207 Ga0496100_0017487 3300048903 Bacteria 4234
208 Ga0496101_0000032 3300048904 Bacteria 186783
209 Ga0496101_0004073 3300048904 Bacteria 9142
210 Ga0496102_0000197 3300048905 Bacteria 81788
211 Ga0496102_0013273 3300048905 Bacteria 7132
212 Ga0496102_0094352 3300048905 Bacteria 2772
213 Ga0496103_0000225 3300048906 Bacteria 55167
214 Ga0496103_0001060 3300048906 Bacteria 19180
215 Ga0496105_0028440 3300048908 Bacteria 4570
216 Ga0496106_0001136 3300048909 Bacteria 19712
217 Ga0496107_0000415 3300048910 Bacteria 23189
218 Ga0496108_0000571 3300048911 Bacteria 28843
219 Ga0496109_0000030 3300048912 Bacteria 164120
220 Ga0496110_0047191 3300048913 Bacteria 3770
221 Ga0496111_0003000 3300048914 Bacteria 10335
222 Ga0496112_0096553 3300048915 Bacteria 2925
223 Ga0496113_0053112 3300048916 Bacteria 3029
224 Ga0496114_0001301 3300048917 Bacteria 18893
225 Ga0496115_0034041 3300048918 Bacteria 4026
226 Ga0496116_0026867 3300048919 Bacteria 4199
227 Ga0496117_0000160 3300048920 Bacteria 141709
228 Ga0496118_0000448 3300048921 Bacteria 68329
229 Ga0496121_0000004 3300048924 Bacteria 1139011
230 Ga0496121_0007332 3300048924 Bacteria 13334
231 Ga0496122_0000173 3300048925 Bacteria 153768
232 Ga0496122_0048452 3300048925 Bacteria 3266
233 Ga0496124_0000012 3300048927 Bacteria 512581
234 Ga0496124_0011629 3300048927 Bacteria 8783
235 Ga0496125_0000003 3300048928 Bacteria 1189767
236 Ga0496125_0042140 3300048928 Bacteria 3893
237 Ga0496126_0000001 3300048929 Bacteria 1139011
238 Ga0496126_0007004 3300048929 Bacteria 12454
239 Ga0496126_0014405 3300048929 Bacteria 7995
240 Ga0496126_0015455 3300048929 Bacteria 7677
241 Ga0501032_0003393 3300049569 Bacteria 12206
242 Ga0501032_0003611 3300049569 Bacteria 11781
243 Ga0501034_0006219 3300049571 Bacteria 12853
244 Ga0501034_0013620 3300049571 Bacteria 8367
245 Ga0501036_0006776 3300049572 Bacteria 9303
246 Ga0501036_0036035 3300049572 Bacteria 4186
247 Ga0501037_0000234 3300049573 Bacteria 47815
248 Ga0501037_0032647 3300049573 Bacteria 3845
249 Ga0501038_0002391 3300049574 Bacteria 17472
250 Ga0501039_0001303 3300049575 Bacteria 18231
251 Ga0501039_0002856 3300049575 Bacteria 12920
252 Ga0501043_0000082 3300049579 Bacteria 84442
253 Ga0501043_0000612 3300049579 Bacteria 31601
254 Ga0501047_0084613 3300049581 Bacteria 3048
255 Ga0501069_0042055 3300049585 Bacteria 2527
256 Ga0501070_0000335 3300049586 Bacteria 42663
257 Ga0501070_0000446 3300049586 Bacteria 37561
258 Ga0501070_0003916 3300049586 Bacteria 12847
259 Ga0501073_0049371 3300049589 Bacteria 2951
260 Ga0501080_0000025 3300049742 Bacteria 89908
261 Ga0501035_0040197 3300049822 Bacteria 4228
262 Ga0501044_0054783 3300049823 Bacteria 4098
263 Ga0495601_0012311 3300053077 Bacteria 5130
264 Ga0495601_0034432 3300053077 Bacteria 3160
265 Ga0495619_0037586 3300053085 Bacteria 3156
266 Ga0495619_0053357 3300053085 Bacteria 2674
267 Ga0500569_007535 3300053109 Bacteria 2448
268 Ga0500568_0007819 3300053139 Bacteria 5208
269 Ga0501084_0103000 3300054114 Bacteria 2397
270 2868090515 2868088558 Bacteria 7609351
271 2643893402 2643221576 Bacteria 5214352
272 2643962452 2643221590 Bacteria 5214697
273 2644490247 2643221687 Bacteria 6500351
274 2729907941 2728369276 Bacteria 5610032
275 2738667210 2738541264 Bacteria 5935393
276 2739146054 2738541356 Bacteria 5935017
277 2809197043 2808606439 Bacteria 5952208
278 2857729902 2857729791 Bacteria 4040535
279 2887484331 2887478801 Bacteria 8972725
280 2895432570 2895427314 Bacteria 13147766
281 2902814712 2902810491 Bacteria 6794147
282 8003320843 8003314358 Bacteria 10575343
283 8056209071 8056207758 Bacteria 8639239
284 8056210730 8056207758 Bacteria 8639239
285 JGI24740J21852_10017464
286 rootH2_10015581
287 Ga0055527_1000005
288 Ga0055542_1000006
289 Ga0055529_1000013
290 Ga0055540_1000022
291 Ga0070658_10004928
292 Ga0070658_10141716
293 Ga0070683_100059264
294 Ga0070683_100059811
295 Ga0070666_10016080
296 Ga0070666_10029569
297 Ga0070660_100034273
298 Ga0070660_100066132
299 Ga0070661_100106963
300 Ga0070668_100004430
301 Ga0070669_100013327
302 Ga0070667_100000333
303 Ga0070667_100000443
304 Ga0070714_100011055
305 Ga0070714_100039610
306 Ga0070714_100128141
307 Ga0070713_100016192
308 Ga0070708_100005758
309 Ga0070708_100008249
310 Ga0070663_100001580
311 Ga0070681_10035419
312 Ga0070706_100024379
313 Ga0070706_100041056
314 Ga0070707_100037281
315 Ga0070698_100012653
316 Ga0070699_100000840
317 Ga0070697_100002040
318 Ga0070665_100021155
319 Ga0068855_100007930
320 Ga0068852_100000260
321 Ga0068859_100002932
322 Ga0068863_100000946
323 Ga0068860_100000160
324 Ga0068862_100000131
325 Ga0081540_1000591
326 Ga0075369_10026476
327 Ga0097620_100002932
328 Ga0105247_10000078
329 Ga0105241_10001645
330 Ga0105242_10129337
331 Ga0105248_10000082
332 Ga0105248_10093600
333 Ga0105237_10031907
334 Ga0105249_10000031
335 Ga0157369_10126564
336 Ga0163163_10049004
337 Ga0213875_10000581
338 Ga0213875_10000833
339 Ga0224712_10018045
340 Ga0209672_100003
341 Ga0209147_101215
342 Ga0209258_100804
343 Ga0209148_1000004
344 Ga0209455_1000022
345 Ga0209051_1000033
346 Ga0209051_1004531
347 Ga0207653_10003535
348 Ga0207710_10000022
349 Ga0207647_10002116
350 Ga0207645_10029468
351 Ga0207643_10016381
352 Ga0207705_10003394
353 Ga0207684_10006538
354 Ga0207684_10033154
355 Ga0207684_10034349
356 Ga0207684_10060933
357 Ga0207671_10000692
358 Ga0207671_10015699
359 Ga0207662_10006674
360 Ga0207657_10006536
361 Ga0207681_10006790
362 Ga0207694_10003545
363 Ga0207664_10001463
364 Ga0207664_10023590
365 Ga0207665_10018680
366 Ga0207665_10029337
367 Ga0207691_10018022
368 Ga0207711_10000114
369 Ga0207689_10007992
370 Ga0207667_10013702
371 Ga0207712_10000029
372 Ga0207668_10001785
373 Ga0207658_10000241
374 Ga0207658_10000253
375 Ga0207678_10000313
376 Ga0207678_10010636
377 Ga0207678_10034090
378 Ga0207678_10049403
379 Ga0207641_10001454
380 Ga0207674_10009615
381 Ga0207674_10073681
382 Ga0207683_10062453
383 Ga0207698_10000078
384 Ga0268266_10015282
385 Ga0268265_10000040
386 Ga0268264_10000017
387 Ga0307515_10092361
388 Ga0265338_10001588
389 Ga0307511_10000221
390 Ga0307512_10003261
391 Ga0307512_10028901
392 Ga0265327_10002001
393 Ga0307513_10008235
394 Ga0307414_10004913
395 Ga0373926_0003645
396 Ga0373926_0006737
397 Ga0373936_0001945
398 Ga0373941_0006723
399 Ga0373945_0000293
400 Ga0373945_0004281
401 Ga0373953_0007152
402 Ga0373954_0018184
403 Ga0373957_0013641
404 Ga0373957_0024166
405 Ga0373943_0000100
406 Ga0373946_0004256
407 Ga0373946_0010488
408 Ga0373955_0024093
409 Ga0373924_0000740
410 Ga0373935_0036882
411 Ga0373927_0035245
412 Ga0373933_0011285
413 Ga0373933_0060837
414 Ga0373947_0008645
415 Ga0373925_0000013
416 Ga0373925_0001808
417 Ga0373925_0005882
418 Ga0373925_0032355
419 Ga0395898_0165198
420 Ga0436364_0270774
421 Ga0436364_0658848
422 Ga0439461_0001194
423 Ga0439465_0000485
424 Ga0439465_0010163
425 Ga0466972_0025058
426 Ga0466961_0008120
427 Ga0466961_0010078
428 Ga0466963_0030889
429 Ga0466964_0010951
430 Ga0466968_0000916
431 Ga0466957_0017428
432 Ga0466960_0008591
433 Ga0466960_0026332
434 Ga0495629_0001482
435 Ga0495638_0000438
436 Ga0495641_0020696
437 Ga0495651_0002176
438 Ga0495651_0003174
439 Ga0495651_0011407
440 Ga0495651_0044270
441 Ga0495653_0002535
442 Ga0495580_0011650
443 Ga0495639_0003946
444 Ga0495662_0003243
445 Ga0495662_0048204
446 Ga0495664_0003232
447 Ga0495664_0010398
448 Ga0495594_0009946
449 Ga0495606_0013608
450 Ga0495608_0003512
451 Ga0495618_0040286
452 Ga0495666_0010825
453 Ga0495652_0019885
454 Ga0495665_0020525
455 Ga0495665_0052411
456 Ga0495640_0010648
457 Ga0495640_0057263
458 Ga0495587_0036353
459 Ga0495645_0033327
460 Ga0495645_0089344
461 Ga0495667_0004261
462 Ga0495667_0039391
463 Ga0495667_0040893
464 Ga0495668_0003660
465 Ga0495625_0002423
466 Ga0495635_0012677
467 Ga0495588_0011702
468 Ga0495657_0003119
469 Ga0495657_0021145
470 Ga0495623_0040259
471 Ga0495646_0025051
472 Ga0495647_0002441
473 Ga0495658_0002166
474 Ga0495624_0030976
475 Ga0495600_0001512
476 Ga0495600_0050225
477 Ga0495581_0008374
478 Ga0495604_0008388
479 Ga0495604_0080772
480 Ga0495676_0021741
481 Ga0495680_0002083
482 Ga0495680_0039626
483 Ga0495675_0044589
484 Ga0495684_0004766
485 Ga0495684_0012394
486 Ga0495684_0020462
487 Ga0495593_0035856
488 Ga0495614_0013014
489 Ga0495626_0000168
490 Ga0496100_0001192
491 Ga0496100_0017487
492 Ga0496101_0000032
493 Ga0496101_0004073
494 Ga0496102_0000197
495 Ga0496102_0013273
496 Ga0496102_0094352
497 Ga0496103_0000225
498 Ga0496103_0001060
499 Ga0496105_0028440
500 Ga0496106_0001136
501 Ga0496107_0000415
502 Ga0496108_0000571
503 Ga0496109_0000030
504 Ga0496110_0047191
505 Ga0496111_0003000
506 Ga0496112_0096553
507 Ga0496113_0053112
508 Ga0496114_0001301
509 Ga0496115_0034041
510 Ga0496116_0026867
511 Ga0496117_0000160
512 Ga0496118_0000448
513 Ga0496121_0000004
514 Ga0496121_0007332
515 Ga0496122_0000173
516 Ga0496122_0048452
517 Ga0496124_0000012
518 Ga0496124_0011629
519 Ga0496125_0000003
520 Ga0496125_0042140
521 Ga0496126_0000001
522 Ga0496126_0007004
523 Ga0496126_0014405
524 Ga0496126_0015455
525 Ga0501032_0003393
526 Ga0501032_0003611
527 Ga0501034_0006219
528 Ga0501034_0013620
529 Ga0501036_0006776
530 Ga0501036_0036035
531 Ga0501037_0000234
532 Ga0501037_0032647
533 Ga0501038_0002391
534 Ga0501039_0001303
535 Ga0501039_0002856
536 Ga0501043_0000082
537 Ga0501043_0000612
538 Ga0501047_0084613
539 Ga0501069_0042055
540 Ga0501070_0000335
541 Ga0501070_0000446
542 Ga0501070_0003916
543 Ga0501073_0049371
544 Ga0501080_0000025
545 Ga0501035_0040197
546 Ga0501044_0054783
547 Ga0495601_0012311
548 Ga0495601_0034432
549 Ga0495619_0037586
550 Ga0495619_0053357
551 Ga0500569_007535
552 Ga0500568_0007819
553 Ga0501084_0103000
554 2868090515
555 2643893402
556 2643962452
557 2644490247
558 2729907941
559 2738667210
560 2739146054
561 2809197043
562 2857729902
563 2887484331
564 2895432570
565 2902814712
566 8003320843
567 8056209071
568 8056210730

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01179

Cu_amine_oxid

Copper amine oxidase, enzyme domain

337

739

0.97

PF02728

Cu_amine_oxidN3

Copper amine oxidase, N3 domain

214

315

0.94

PF02727

Cu_amine_oxidN2

Copper amine oxidase, N2 domain

50

109

0.92

PF21994

AGAO-like_N2

AGAO-like N2 domain

56

101

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ui8-assembly1.cif.gz_A site-directed mutagenesis of his592 involved in binding of copper ion in arthrobacter globiformis amine oxidase 0.9846 10 630
7wno-assembly1.cif.gz_X crystallographic structure of copper amine oxidase from arthrobacter glibiformis at pd 7.4 determined by only neutron diffraction data. 0.9843 10 631
3kii-assembly1.cif.gz_B agao 5-phenoxy-2,3-pentadienylamine complex 0.9841 10 630
7wir-assembly1.cif.gz_B holo form of n381a mutant of copper amine oxidase from arthrobacter globiformis 0.984 10 630
1avk-assembly1.cif.gz_A crystal structures of the copper-containing amine oxidase from arthrobacter globiformis in the holo-and apo-forms: implications for the biogenesis of topa quinone 0.9838 10 630
ID Description Score Start End Superfamily
1wmpA03 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Copper amine oxidase, catalytic domain 0.9892 208 628 2.70.98.20
1wmpA03 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Copper amine oxidase, catalytic domain 0.9799 208 628 2.70.98.20
1ekmA03 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Copper amine oxidase, catalytic domain 0.9707 214 630 2.70.98.20
3loyB03 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Copper amine oxidase, catalytic domain 0.9552 220 630 2.70.98.20
af_Q9STI3_1_289_2.70.98.20 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Copper amine oxidase, catalytic domain 0.9522 364 630 2.70.98.20
ID Description Score Start End GO Terms
AF-A0A1Q4DDB9-F1-model_v4 Amine oxidase (EC 1.4.3.-) 0.9869 16 634 GO:0005507
GO:0008131
GO:0009308
GO:0048038
GO:0052595
AF-A0A1H9XGB8-F1-model_v4 Amine oxidase (EC 1.4.3.-) 0.9864 180 634 GO:0005507
GO:0008131
GO:0009308
GO:0048038
GO:0052595
AF-A0A3N2H870-F1-model_v4 Amine oxidase (EC 1.4.3.-) 0.9857 7 636 GO:0005507
GO:0008131
GO:0009308
GO:0048038
GO:0052595
AF-A0A259RUU8-F1-model_v4 Amine oxidase (EC 1.4.3.-) 0.985 7 412 GO:0005507
GO:0008131
GO:0009308
GO:0048038
GO:0052595
AF-H5TWY9-F1-model_v4 Amine oxidase (EC 1.4.3.-) 0.9841 7 637 GO:0005507
GO:0008131
GO:0009308
GO:0016020
GO:0048038
GO:0052595
GO:0055085

Map