F386420

General Info

Members Datasets Scaffolds Average Seq Length
284 183 206 510

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0002285|Ga0496122_0002285_8311_10089
Length 592
Sequence LSHNRIILSKFAKILIEMEKVRVRFAPSPTGPLHLGGVRTALYDYLFAKNQGGEFVLRIEDTDTARYVEGAEEYIEEALEWCGIIPDESPKKGGKFAPYRQSERRDIYDRYTEQILKTDYAYMAFDTPEELDAVRAEFEANGEVFSYDNKTRNRLRNSLALSEEEVQKLLDAKTPYVVRFKMPVDRILNLEDIIRGKSAVNTNTLDDKVLVKNDGMPTYHFANIIDDHEMEISHVIRGEEWLPSLGLHTLLYEAMGWEAPQFAHLSLILKPDVSALINKDNIDGITKSFTDEFVAKNSQFSFDEAAPIIKSFFAEVKSPRFKSMLGENDNDNPLMAAVKQFLKKGLSGKLSKRDGDKFGFPVFPLDFKDPATGAVSRGYRENGYLPDAFINMVALLGWSPADDKEILSLDEMAKEFDLHKVHKAGARFSKEKSEWFNHQYIQMRSDEELLQMLKNSDLDLSGASDEKLLKVIPLMKERATFPKDIYENGKFFFEAPTSYDEKASKKAWNDETSAILGELATTLESTDFVAETLKQMMHDFAENKGLGMGKVMMPLRLALVGELKGPDVPDILEIIGKEESIARISNAINNFK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
5 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
6 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
7 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
8 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
9 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
10 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
11 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
12 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
13 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
14 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
15 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
16 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
17 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
18 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
19 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
20 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
21 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
22 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
23 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
24 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
25 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
26 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
27 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
28 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
29 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
30 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
31 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
32 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
33 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
34 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
35 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
36 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
37 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
38 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
39 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
40 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
41 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
42 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
43 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
44 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
45 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
46 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
47 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
48 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
49 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
50 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
51 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
52 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
53 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
54 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
55 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
56 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
57 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
58 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
59 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
60 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
61 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
62 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
63 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
64 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
65 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
66 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
67 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
68 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
69 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
70 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
71 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
72 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
73 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
74 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
75 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
76 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
77 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
78 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
79 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
80 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
81 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
82 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
83 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
84 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
85 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
86 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
87 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
90 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
91 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
92 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
93 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
94 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
104 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
105 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
107 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
108 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
124 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
125 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
126 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
127 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
134 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
140 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
141 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
168 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
169 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
170 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
171 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
176 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
179 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
180 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
181 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
182 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
183 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.54
Metatranscriptomes 0
Isolates 27.46

Biome Distribution

Category Percentage (%)
Aerial Root 0.7
Bulb 0
Endosphere 2.11
Nodule 2.11
Rhizoplane 1.06
Rhizosphere 73.59
Stem 0
Stem Tuber 0
Unclassified 20.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1894317 2162886007 Bacteria 1981
2 SwRhRL2b_contig_321779 2162886007 Bacteria 3330
3 JGI24741J21665_1000909 3300001915 Bacteria 8925
4 rootL2_10108142 3300003322 Bacteria 3370
5 rootH1_10015948 3300003323 Bacteria 12564
6 Ga0055534_1004040 3300003784 Bacteria 4394
7 Ga0065714_10086946 3300005288 Bacteria 2080
8 Ga0065704_10000883 3300005289 Bacteria 11524
9 Ga0065704_10073155 3300005289 Bacteria 7519
10 Ga0065704_10074650 3300005289 Bacteria 6110
11 Ga0070683_100000549 3300005329 Bacteria 26601
12 Ga0070682_100000329 3300005337 Bacteria 32581
13 Ga0070682_100009803 3300005337 Bacteria 5422
14 Ga0070684_100002866 3300005535 Bacteria 12819
15 Ga0099824_1008108 3300006942 Bacteria 13556
16 Ga0099826_10005088 3300006948 Bacteria 9355
17 Ga0105244_10000001 3300009036 Bacteria 1034899
18 Ga0105244_10000304 3300009036 Bacteria 47730
19 Ga0105243_10000839 3300009148 Bacteria 29245
20 Ga0105249_10092126 3300009553 Bacteria 2837
21 Ga0157373_10000197 3300013100 Bacteria 49793
22 Ga0157373_10000899 3300013100 Bacteria 23033
23 Ga0157371_10000175 3300013102 Bacteria 93201
24 Ga0157371_10030562 3300013102 Bacteria 3885
25 Ga0157370_10003306 3300013104 Bacteria 19005
26 Ga0157370_10005420 3300013104 Bacteria 14311
27 Ga0157370_10005971 3300013104 Bacteria 13548
28 Ga0157370_10006822 3300013104 Bacteria 12514
29 Ga0157370_10031681 3300013104 Bacteria 5171
30 Ga0157369_10010455 3300013105 Bacteria 10572
31 Ga0163162_10058175 3300013306 Bacteria 3894
32 Ga0157375_10005081 3300013308 Bacteria 11415
33 Ga0182008_10000027 3300014497 Bacteria 177524
34 Ga0182006_1000003 3300015261 Bacteria 826681
35 Ga0182006_1001461 3300015261 Bacteria 14237
36 Ga0182006_1004717 3300015261 Bacteria 6665
37 Ga0163161_10000068 3300017792 Bacteria 104097
38 Ga0163161_10011342 3300017792 Bacteria 6179
39 Ga0209675_1000101 3300025291 Bacteria 127715
40 Ga0207655_1000003 3300025728 Bacteria 1081376
41 Ga0207655_1000018 3300025728 Bacteria 537129
42 Ga0207709_10000315 3300025935 Bacteria 52787
43 Ga0207661_10001311 3300025944 Bacteria 16632
44 Ga0207712_10054588 3300025961 Bacteria 2807
45 Ga0209281_1000045 3300027111 Bacteria 328124
46 Ga0209489_112559 3300027361 Bacteria 7576
47 Ga0209968_1000680 3300027526 Bacteria 5241
48 Ga0209282_1022757 3300027666 Bacteria 3944
49 Ga0265323_10000885 3300028653 Bacteria 15857
50 Ga0265322_10004981 3300028654 Bacteria 3938
51 Ga0265338_10001693 3300028800 Bacteria 35028
52 Ga0265338_10049398 3300028800 Bacteria 3814
53 Ga0265330_10003633 3300031235 Bacteria 8028
54 Ga0265316_10008682 3300031344 Bacteria 9405
55 Ga0265316_10029084 3300031344 Bacteria 4548
56 Ga0265316_10047758 3300031344 Bacteria 3384
57 Ga0307408_100000059 3300031548 Bacteria 134620
58 Ga0307408_100000158 3300031548 Bacteria 75641
59 Ga0265342_10004409 3300031712 Bacteria 11103
60 Ga0307405_10000001 3300031731 Bacteria 1731270
61 Ga0307413_10000001 3300031824 Bacteria 159157
62 Ga0307410_10003792 3300031852 Bacteria 7671
63 Ga0307406_10000023 3300031901 Bacteria 96825
64 Ga0307406_10000300 3300031901 Bacteria 29271
65 Ga0307407_10005913 3300031903 Bacteria 5372
66 Ga0307412_10000081 3300031911 Bacteria 93448
67 Ga0307412_10000216 3300031911 Bacteria 39140
68 Ga0307416_100000178 3300032002 Bacteria 34521
69 Ga0307416_100022497 3300032002 Bacteria 4551
70 Ga0307414_10000022 3300032004 Bacteria 212123
71 Ga0307414_10000047 3300032004 Bacteria 132863
72 Ga0307414_10000078 3300032004 Bacteria 90911
73 Ga0307414_10001937 3300032004 Bacteria 10711
74 Ga0307414_10004732 3300032004 Bacteria 7427
75 Ga0307414_10019733 3300032004 Bacteria 4184
76 Ga0307414_10140736 3300032004 Bacteria 1888
77 Ga0307411_10000003 3300032005 Bacteria 477556
78 Ga0316580_10011112 3300032139 Unclassified 2728
79 Ga0400483_019016 3300039062 Bacteria 12417
80 Ga0400483_151533 3300039062 Bacteria 19785
81 Ga0400483_182647 3300039062 Bacteria 1808
82 Ga0439447_000040 3300041407 Bacteria 45749
83 Ga0439466_0000607 3300041411 Bacteria 13465
84 Ga0451855_0583596 3300041511 Bacteria 1788
85 Ga0451577_0000066 3300042876 Bacteria 257650
86 Ga0451577_0002113 3300042876 Bacteria 24476
87 Ga0451577_0005001 3300042876 Bacteria 13742
88 Ga0451577_0010672 3300042876 Bacteria 8747
89 Ga0451577_0034665 3300042876 Bacteria 4548
90 Ga0451577_0041910 3300042876 Bacteria 4108
91 Ga0451577_0157455 3300042876 Unclassified 2045
92 Ga0451577_0318222 3300042876 Bacteria 1411
93 Ga0453683_0000010 3300044673 Bacteria 470890
94 Ga0453683_0000092 3300044673 Bacteria 136648
95 Ga0453683_0001659 3300044673 Bacteria 18663
96 Ga0453683_0005556 3300044673 Bacteria 8776
97 Ga0453683_0062994 3300044673 Bacteria 2318
98 Ga0453684_0000167 3300044712 Bacteria 290200
99 Ga0453684_0000199 3300044712 Bacteria 264155
100 Ga0453684_0000206 3300044712 Bacteria 257650
101 Ga0453684_0000337 3300044712 Bacteria 195296
102 Ga0453684_0000527 3300044712 Bacteria 146072
103 Ga0453684_0000911 3300044712 Bacteria 98351
104 Ga0453684_0003558 3300044712 Bacteria 34854
105 Ga0453684_0003919 3300044712 Bacteria 32695
106 Ga0453684_0020070 3300044712 Bacteria 10118
107 Ga0453684_0020663 3300044712 Bacteria 9908
108 Ga0453684_0022489 3300044712 Bacteria 9347
109 Ga0453684_0035200 3300044712 Bacteria 6926
110 Ga0453684_0037051 3300044712 Bacteria 6701
111 Ga0453684_0039990 3300044712 Bacteria 6377
112 Ga0453684_0053222 3300044712 Bacteria 5285
113 Ga0453684_0066940 3300044712 Bacteria 4571
114 Ga0453684_0096357 3300044712 Bacteria 3635
115 Ga0453684_0131435 3300044712 Bacteria 3003
116 Ga0453684_0241065 3300044712 Bacteria 2081
117 Ga0453684_0285222 3300044712 Bacteria 1882
118 Ga0453684_0451317 3300044712 Bacteria 1431
119 Ga0451576_0000072 3300045051 Bacteria 257650
120 Ga0451576_0000211 3300045051 Bacteria 146199
121 Ga0451576_0000369 3300045051 Bacteria 107433
122 Ga0451576_0004424 3300045051 Bacteria 18260
123 Ga0451576_0007852 3300045051 Bacteria 12645
124 Ga0451576_0016938 3300045051 Bacteria 8027
125 Ga0451576_0017943 3300045051 Bacteria 7768
126 Ga0451576_0021818 3300045051 Bacteria 6952
127 Ga0451576_0030839 3300045051 Bacteria 5721
128 Ga0451576_0038214 3300045051 Bacteria 5080
129 Ga0451576_0042680 3300045051 Bacteria 4787
130 Ga0451576_0090525 3300045051 Bacteria 3182
131 Ga0451576_0110268 3300045051 Bacteria 2864
132 Ga0451576_0210445 3300045051 Bacteria 2031
133 Ga0451576_0233971 3300045051 Bacteria 1919
134 Ga0495627_000077 3300046453 Bacteria 120100
135 Ga0495627_001393 3300046453 Bacteria 14314
136 Ga0495627_019852 3300046453 Bacteria 2247
137 Ga0495596_0009438 3300046500 Bacteria 4290
138 Ga0495607_0044514 3300046501 Bacteria 2617
139 Ga0495606_0012209 3300046507 Bacteria 6915
140 Ga0495606_0019073 3300046507 Bacteria 5118
141 Ga0495610_0000006 3300046512 Bacteria 856822
142 Ga0495632_0004243 3300046519 Bacteria 9792
143 Ga0495643_0012420 3300046522 Bacteria 5139
144 Ga0495663_0000058 3300046525 Bacteria 51194
145 Ga0495654_0000044 3300046530 Bacteria 158495
146 Ga0495609_0000042 3300046538 Bacteria 167765
147 Ga0495633_0000196 3300046558 Bacteria 77379
148 Ga0495633_0000798 3300046558 Bacteria 28126
149 Ga0495625_0000215 3300046660 Bacteria 91211
150 Ga0495625_0013881 3300046660 Bacteria 6452
151 Ga0495686_0000448 3300047472 Bacteria 62341
152 Ga0495686_0017538 3300047472 Bacteria 4818
153 Ga0496102_0041630 3300048905 Bacteria 4161
154 Ga0496113_0068068 3300048916 Bacteria 2702
155 Ga0496115_0043938 3300048918 Bacteria 3563
156 Ga0496116_0000144 3300048919 Bacteria 148276
157 Ga0496116_0000908 3300048919 Bacteria 36624
158 Ga0496117_0000076 3300048920 Bacteria 232366
159 Ga0496117_0032913 3300048920 Bacteria 3930
160 Ga0496118_0013126 3300048921 Bacteria 7866
161 Ga0496119_0000021 3300048922 Bacteria 277056
162 Ga0496121_0018096 3300048924 Bacteria 7129
163 Ga0496121_0149525 3300048924 Bacteria 1720
164 Ga0496122_0000781 3300048925 Bacteria 61198
165 Ga0496122_0001628 3300048925 Bacteria 35035
166 Ga0496122_0002254 3300048925 Bacteria 27910
167 Ga0496122_0002285 3300048925 Bacteria 27713
168 Ga0496122_0004119 3300048925 Bacteria 18384
169 Ga0496123_0001183 3300048926 Bacteria 38432
170 Ga0496123_0031514 3300048926 Bacteria 3856
171 Ga0496123_0081325 3300048926 Bacteria 1969
172 Ga0496124_0000553 3300048927 Bacteria 63280
173 Ga0496124_0018197 3300048927 Bacteria 6589
174 Ga0496125_0000267 3300048928 Bacteria 107026
175 Ga0496125_0000914 3300048928 Bacteria 46497
176 Ga0496125_0002947 3300048928 Bacteria 21414
177 Ga0496125_0048369 3300048928 Bacteria 3547
178 Ga0496126_0002233 3300048929 Bacteria 26783
179 Ga0496126_0013119 3300048929 Bacteria 8451
180 Ga0496126_0051087 3300048929 Bacteria 3765
181 Ga0501031_0004644 3300049568 Bacteria 8918
182 Ga0501032_0002787 3300049569 Bacteria 13603
183 Ga0501032_0025583 3300049569 Bacteria 4068
184 Ga0501033_0000022 3300049570 Bacteria 190111
185 Ga0501034_0000207 3300049571 Bacteria 111947
186 Ga0501037_0017467 3300049573 Bacteria 5279
187 Ga0501038_0004680 3300049574 Bacteria 12740
188 Ga0501039_0002143 3300049575 Bacteria 14601
189 Ga0501043_0001066 3300049579 Bacteria 24128
190 Ga0501048_0118372 3300049582 Bacteria 1871
191 Ga0501238_000046 3300049671 Bacteria 20099
192 Ga0501249_000032 3300049679 Bacteria 73488
193 Ga0501249_004546 3300049679 Bacteria 2820
194 Ga0501241_000010 3300049758 Bacteria 116592
195 Ga0501241_000122 3300049758 Bacteria 16826
196 Ga0501266_000003 3300049763 Bacteria 388836
197 Ga0501280_000331 3300049776 Bacteria 11822
198 Ga0501035_0000713 3300049822 Bacteria 35946
199 Ga0501035_0006885 3300049822 Bacteria 10619
200 Ga0501044_0000104 3300049823 Bacteria 103223
201 Ga0501045_0000130 3300049824 Bacteria 39547
202 Ga0501204_001549 3300049850 Bacteria 2263
203 Ga0500646_0002808 3300053090 Bacteria 4476
204 Ga0500641_0000005 3300053096 Bacteria 226810
205 Ga0500641_0000035 3300053096 Bacteria 76946
206 Ga0500658_0000069 3300053134 Bacteria 48356

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0318222 Ga0451577_0318222_37_1257 404
2 3300044712 Ga0453684_0451317 Ga0453684_0451317_76_1410 442
3 3300013102 Ga0157371_10030562 Ga0157371_100305624 453
4 3300049850 Ga0501204_001549 Ga0501204_001549_142_1596 468
5 3300028654 Ga0265322_10004981 Ga0265322_100049812 475
6 3300031344 Ga0265316_10029084 Ga0265316_100290843 475
7 3300031235 Ga0265330_10003633 Ga0265330_100036335 477
8 3300031712 Ga0265342_10004409 Ga0265342_100044096 477
9 3300041511 Ga0451855_0583596 Ga0451855_0583596_299_1750 479
10 3300044712 Ga0453684_0053222 Ga0453684_0053222_3434_4927 479
11 3300044712 Ga0453684_0020070 Ga0453684_0020070_5867_7315 480
12 3300044712 Ga0453684_0285222 Ga0453684_0285222_207_1661 480
13 3300045051 Ga0451576_0007852 Ga0451576_0007852_3332_4780 480
14 3300049758 Ga0501241_000122 Ga0501241_000122_10741_12195 481
15 3300045051 Ga0451576_0004424 Ga0451576_0004424_16263_17726 482
16 3300042876 Ga0451577_0005001 Ga0451577_0005001_6770_8308 483
17 3300044712 Ga0453684_0003919 Ga0453684_0003919_16606_18144 483
18 3300045051 Ga0451576_0016938 Ga0451576_0016938_910_2370 483
19 3300049568 Ga0501031_0004644 Ga0501031_0004644_2478_3965 484
20 3300049569 Ga0501032_0002787 Ga0501032_0002787_8511_9998 484
21 3300049569 Ga0501032_0025583 Ga0501032_0025583_72_1559 484
22 3300049570 Ga0501033_0000022 Ga0501033_0000022_118525_120012 484
23 3300049571 Ga0501034_0000207 Ga0501034_0000207_32109_33596 484
24 3300049573 Ga0501037_0017467 Ga0501037_0017467_3734_5221 484
25 3300049574 Ga0501038_0004680 Ga0501038_0004680_4954_6441 484
26 3300049575 Ga0501039_0002143 Ga0501039_0002143_9659_11146 484
27 3300049579 Ga0501043_0001066 Ga0501043_0001066_8110_9597 484
28 3300049582 Ga0501048_0118372 Ga0501048_0118372_71_1558 484
29 3300049822 Ga0501035_0000713 Ga0501035_0000713_8519_10006 484
30 3300049823 Ga0501044_0000104 Ga0501044_0000104_70049_71536 484
31 3300049824 Ga0501045_0000130 Ga0501045_0000130_2401_3888 484
32 3300031548 Ga0307408_100000059 Ga0307408_10000005989 485
33 3300044673 Ga0453683_0000092 Ga0453683_0000092_93604_95067 485
34 3300044712 Ga0453684_0241065 Ga0453684_0241065_385_1911 485
35 3300045051 Ga0451576_0000369 Ga0451576_0000369_36099_37562 485
36 3300042876 Ga0451577_0002113 Ga0451577_0002113_21710_23179 486
37 3300044712 Ga0453684_0000167 Ga0453684_0000167_89032_90504 486
38 3300044712 Ga0453684_0000527 Ga0453684_0000527_21586_23055 486
39 3300045051 Ga0451576_0000211 Ga0451576_0000211_21586_23055 486
40 3300045051 Ga0451576_0042680 Ga0451576_0042680_3102_4628 487
41 3300046530 Ga0495654_0000044 Ga0495654_0000044_60767_62272 489
42 3300003784 Ga0055534_1004040 Ga0055534_10040402 490
43 3300025291 Ga0209675_1000101 Ga0209675_100010166 490
44 3300048925 Ga0496122_0004119 Ga0496122_0004119_74_1582 490
45 3300048926 Ga0496123_0081325 Ga0496123_0081325_414_1922 490
46 3300048928 Ga0496125_0002947 Ga0496125_0002947_1916_3424 490
47 iso_pu_bacteria 2585428045 2587678838 492
48 iso_pu_bacteria 2588254255 2590602030 492
49 iso_pu_bacteria 2511231000 2511233066 494
50 iso_pu_bacteria 2523533629 2524006378 494
51 iso_pu_bacteria 2582581278 2585142184 494
52 iso_pu_bacteria 2582581281 2585156360 494
53 iso_pu_bacteria 2582581282 2585160593 494
54 iso_pu_bacteria 2582581873 2585427086 494
55 iso_pu_bacteria 2585428060 2587747783 494
56 iso_pu_bacteria 2585428061 2587751665 494
57 iso_pu_bacteria 2585428115 2587941483 494
58 iso_pu_bacteria 2585428182 2588210764 494
59 iso_pu_bacteria 2585428183 2588214003 494
60 iso_pu_bacteria 2585428184 2588221238 494
61 iso_pu_bacteria 2585428185 2588221792 494
62 iso_pu_bacteria 2585428187 2588232525 494
63 iso_pu_bacteria 2588253712 2588443510 494
64 iso_pu_bacteria 2588254257 2590613754 494
65 iso_pu_bacteria 2728369107 2729202982 494
66 iso_pu_bacteria 2751185877 2753673584 494
67 iso_pu_bacteria 2765235839 2765574716 494
68 iso_pu_bacteria 2772190705 2772605520 494
69 iso_pu_bacteria 2775506739 2775671520 494
70 iso_pu_bacteria 2816332188 2816876486 494
71 iso_pu_bacteria 2842083920 2842085446 494
72 iso_pu_bacteria 2871720351 2871722568 494
73 iso_pu_bacteria 2889290771 2889294734 494
74 iso_pu_bacteria 2905999023 2906002954 494
75 iso_pu_bacteria 2919097161 2919099653 494
76 iso_pu_bacteria 2919399522 2919402599 494
77 iso_pu_bacteria 2945924605 2945925617 494
78 iso_pu_bacteria 2946019816 2946023153 494
79 iso_pu_bacteria 2984572630 2984573648 494
80 iso_pu_bacteria 2984606641 2984607090 494
81 iso_pu_bacteria 2993372514 2993375923 494
82 iso_pu_bacteria 2993480792 2993482781 494
83 3300048929 Ga0496126_0013119 Ga0496126_0013119_3609_5372 495
84 iso_pu_bacteria 2585428095 2587867465 495
85 iso_pu_bacteria 2739367874 2740059528 495
86 3300046453 Ga0495627_001393 Ga0495627_001393_8972_10465 496
87 iso_pu_bacteria 2890804823 2890806464 496
88 3300013102 Ga0157371_10000175 Ga0157371_1000017564 497
89 3300013104 Ga0157370_10005971 Ga0157370_100059715 497
90 3300032004 Ga0307414_10000022 Ga0307414_100000226 497
91 3300039062 Ga0400483_182647 Ga0400483_182647_116_1771 497
92 3300048924 Ga0496121_0018096 Ga0496121_0018096_3865_5358 497
93 iso_pu_bacteria 2513020052 2513234645 497
94 iso_pu_bacteria 2519899754 2520880413 497
95 iso_pu_bacteria 2643221600 2644012187 497
96 iso_pu_bacteria 2643221667 2644374502 497
97 iso_pu_bacteria 2643221716 2644641460 497
98 iso_pu_bacteria 2643221725 2644682414 497
99 iso_pu_bacteria 2738541279 2738735882 497
100 iso_pu_bacteria 2738541285 2738768459 497
101 iso_pu_bacteria 2738543007 2739217464 497
102 iso_pu_bacteria 2739367857 2740000426 497
103 iso_pu_bacteria 2739367858 2740005242 497
104 iso_pu_bacteria 2816332280 2817414075 497
105 iso_pu_bacteria 2857613821 2857617846 497
106 iso_pu_bacteria 2857618242 2857621329 497
107 iso_pu_bacteria 2881359912 2881361375 497
108 iso_pu_bacteria 2903895155 2903895158 497
109 iso_pu_bacteria 2904419702 2904420448 497
110 iso_pu_bacteria 2904555929 2904557705 497
111 iso_pu_bacteria 2919191525 2919192339 497
112 iso_pu_bacteria 2919509842 2919513465 497
113 iso_pu_bacteria 2919683626 2919684253 497
114 iso_pu_bacteria 2929150217 2929151216 497
115 iso_pu_bacteria 2965320100 2965321166 497
116 iso_pu_bacteria 2977268062 2977272600 497
117 iso_pu_bacteria 8054307821 8054310927 497
118 iso_pu_bacteria 8055419101 8055420185 497
119 iso_pu_bacteria 8055592153 8055597076 497
120 2162886007 SwRhRL2b_contig_321779 SwRhRL2b_0500.00005200 498
121 3300001915 JGI24741J21665_1000909 JGI24741J21665_10009094 498
122 3300003322 rootL2_10108142 rootL2_101081421 498
123 3300003323 rootH1_10015948 rootH1_100159485 498
124 3300005289 Ga0065704_10000883 Ga0065704_100008836 498
125 3300005329 Ga0070683_100000549 Ga0070683_10000054927 498
126 3300005337 Ga0070682_100000329 Ga0070682_10000032929 498
127 3300005535 Ga0070684_100002866 Ga0070684_1000028665 498
128 3300009036 Ga0105244_10000001 Ga0105244_10000001891 498
129 3300013308 Ga0157375_10005081 Ga0157375_100050814 498
130 3300015261 Ga0182006_1000003 Ga0182006_1000003770 498
131 3300025728 Ga0207655_1000018 Ga0207655_1000018420 498
132 3300025944 Ga0207661_10001311 Ga0207661_100013112 498
133 3300028653 Ga0265323_10000885 Ga0265323_100008855 498
134 3300031344 Ga0265316_10008682 Ga0265316_100086827 498
135 3300031911 Ga0307412_10000081 Ga0307412_1000008130 498
136 3300031911 Ga0307412_10000216 Ga0307412_100002166 498
137 3300032002 Ga0307416_100000178 Ga0307416_10000017825 498
138 3300032004 Ga0307414_10000047 Ga0307414_1000004740 498
139 3300044712 Ga0453684_0131435 Ga0453684_0131435_1012_2514 498
140 3300046453 Ga0495627_000077 Ga0495627_000077_57710_59215 498
141 3300046453 Ga0495627_019852 Ga0495627_019852_40_1764 498
142 3300046500 Ga0495596_0009438 Ga0495596_0009438_2766_4274 498
143 3300046507 Ga0495606_0019073 Ga0495606_0019073_2565_4076 498
144 3300046512 Ga0495610_0000006 Ga0495610_0000006_35828_37555 498
145 3300046519 Ga0495632_0004243 Ga0495632_0004243_5348_7072 498
146 3300046522 Ga0495643_0012420 Ga0495643_0012420_2214_3938 498
147 3300046558 Ga0495633_0000196 Ga0495633_0000196_24617_26122 498
148 3300046558 Ga0495633_0000798 Ga0495633_0000798_23530_25254 498
149 3300046660 Ga0495625_0000215 Ga0495625_0000215_78744_80468 498
150 3300047472 Ga0495686_0000448 Ga0495686_0000448_47032_48756 498
151 3300047472 Ga0495686_0017538 Ga0495686_0017538_26_1531 498
152 3300048925 Ga0496122_0002254 Ga0496122_0002254_11374_13101 498
153 3300048929 Ga0496126_0051087 Ga0496126_0051087_2166_3674 498
154 3300049758 Ga0501241_000010 Ga0501241_000010_63201_64706 498
155 iso_pu_bacteria 2738541273 2738699530 498
156 iso_pu_bacteria 2738543014 2739253279 498
157 iso_pu_bacteria 2833640130 2833641670 498
158 iso_pu_bacteria 2881247448 2881248920 498
159 iso_pu_bacteria 2958512119 2958515613 498
160 3300005289 Ga0065704_10074650 Ga0065704_100746503 499
161 3300009148 Ga0105243_10000839 Ga0105243_1000083913 499
162 3300013100 Ga0157373_10000197 Ga0157373_1000019730 499
163 3300013104 Ga0157370_10003306 Ga0157370_100033064 499
164 3300014497 Ga0182008_10000027 Ga0182008_10000027113 499
165 3300025935 Ga0207709_10000315 Ga0207709_1000031532 499
166 3300028800 Ga0265338_10049398 Ga0265338_100493982 499
167 3300046525 Ga0495663_0000058 Ga0495663_0000058_6992_8500 499
168 3300046538 Ga0495609_0000042 Ga0495609_0000042_49014_50741 499
169 3300048905 Ga0496102_0041630 Ga0496102_0041630_1384_2976 499
170 3300048916 Ga0496113_0068068 Ga0496113_0068068_821_2413 499
171 3300048919 Ga0496116_0000144 Ga0496116_0000144_77717_79309 499
172 3300048920 Ga0496117_0000076 Ga0496117_0000076_152643_154235 499
173 3300048921 Ga0496118_0013126 Ga0496118_0013126_3572_5164 499
174 3300048922 Ga0496119_0000021 Ga0496119_0000021_78157_79749 499
175 3300048925 Ga0496122_0000781 Ga0496122_0000781_2133_3737 499
176 3300048925 Ga0496122_0001628 Ga0496122_0001628_17883_19475 499
177 3300048925 Ga0496122_0002285 Ga0496122_0002285_8311_10089 499
178 3300048926 Ga0496123_0001183 Ga0496123_0001183_21617_23209 499
179 3300048926 Ga0496123_0031514 Ga0496123_0031514_148_1752 499
180 3300048927 Ga0496124_0000553 Ga0496124_0000553_58421_60013 499
181 3300048928 Ga0496125_0048369 Ga0496125_0048369_1891_3483 499
182 iso_pu_bacteria 2977243572 2977244483 499
183 iso_pu_bacteria 8036736890 8036736925 499
184 3300031344 Ga0265316_10047758 Ga0265316_100477581 500
185 3300042876 Ga0451577_0010672 Ga0451577_0010672_3855_5366 500
186 3300042876 Ga0451577_0041910 Ga0451577_0041910_899_2422 500
187 3300042876 Ga0451577_0157455 Ga0451577_0157455_302_1810 500
188 3300044712 Ga0453684_0000337 Ga0453684_0000337_128320_129831 500
189 3300044712 Ga0453684_0037051 Ga0453684_0037051_2580_4088 500
190 3300045051 Ga0451576_0110268 Ga0451576_0110268_886_2397 500
191 iso_pu_bacteria 2884634485 2884637571 500
192 iso_pu_bacteria 2919692658 2919696577 500
193 3300005288 Ga0065714_10086946 Ga0065714_100869462 501
194 3300005337 Ga0070682_100009803 Ga0070682_1000098032 501
195 3300006942 Ga0099824_1008108 Ga0099824_10081085 501
196 3300006948 Ga0099826_10005088 Ga0099826_100050882 501
197 3300009036 Ga0105244_10000304 Ga0105244_1000030418 501
198 3300013100 Ga0157373_10000899 Ga0157373_1000089918 501
199 3300013104 Ga0157370_10006822 Ga0157370_100068229 501
200 3300013105 Ga0157369_10010455 Ga0157369_100104557 501
201 3300015261 Ga0182006_1001461 Ga0182006_100146113 501
202 3300017792 Ga0163161_10000068 Ga0163161_1000006867 501
203 3300025728 Ga0207655_1000003 Ga0207655_1000003197 501
204 3300027111 Ga0209281_1000045 Ga0209281_100004576 501
205 3300027361 Ga0209489_112559 Ga0209489_1125592 501
206 3300027666 Ga0209282_1022757 Ga0209282_10227572 501
207 3300028800 Ga0265338_10001693 Ga0265338_1000169316 501
208 3300031548 Ga0307408_100000158 Ga0307408_10000015841 501
209 3300031824 Ga0307413_10000001 Ga0307413_10000001112 501
210 3300031852 Ga0307410_10003792 Ga0307410_100037928 501
211 3300031901 Ga0307406_10000023 Ga0307406_1000002326 501
212 3300031903 Ga0307407_10005913 Ga0307407_100059132 501
213 3300032002 Ga0307416_100022497 Ga0307416_1000224974 501
214 3300032004 Ga0307414_10019733 Ga0307414_100197334 501
215 3300032004 Ga0307414_10140736 Ga0307414_101407361 501
216 3300032005 Ga0307411_10000003 Ga0307411_10000003331 501
217 3300032139 Ga0316580_10011112 Ga0316580_100111122 501
218 3300041407 Ga0439447_000040 Ga0439447_000040_18955_20460 501
219 3300041411 Ga0439466_0000607 Ga0439466_0000607_11462_12967 501
220 3300044712 Ga0453684_0039990 Ga0453684_0039990_2828_4345 501
221 3300048919 Ga0496116_0000908 Ga0496116_0000908_2791_4296 501
222 3300048920 Ga0496117_0032913 Ga0496117_0032913_992_2497 501
223 3300048924 Ga0496121_0149525 Ga0496121_0149525_71_1576 501
224 3300048927 Ga0496124_0018197 Ga0496124_0018197_3962_5467 501
225 3300048928 Ga0496125_0000914 Ga0496125_0000914_40122_41627 501
226 3300049671 Ga0501238_000046 Ga0501238_000046_2933_4438 501
227 3300049679 Ga0501249_000032 Ga0501249_000032_26928_28433 501
228 3300049679 Ga0501249_004546 Ga0501249_004546_601_2178 501
229 3300049763 Ga0501266_000003 Ga0501266_000003_255427_257004 501
230 3300049776 Ga0501280_000331 Ga0501280_000331_2848_4353 501
231 3300049822 Ga0501035_0006885 Ga0501035_0006885_8086_9591 501
232 3300053090 Ga0500646_0002808 Ga0500646_0002808_2831_4336 501
233 3300053096 Ga0500641_0000005 Ga0500641_0000005_150517_152022 501
234 3300053134 Ga0500658_0000069 Ga0500658_0000069_31908_33413 501
235 iso_pu_bacteria 2802428842 2802651185 501
236 iso_pu_bacteria 2958458903 2958459499 501
237 iso_pu_bacteria 8056440228 8056440846 501
238 3300009553 Ga0105249_10092126 Ga0105249_100921262 502
239 3300013104 Ga0157370_10031681 Ga0157370_100316811 502
240 3300013306 Ga0163162_10058175 Ga0163162_100581752 502
241 3300017792 Ga0163161_10011342 Ga0163161_100113422 502
242 3300025961 Ga0207712_10054588 Ga0207712_100545882 502
243 3300032004 Ga0307414_10004732 Ga0307414_100047322 502
244 3300039062 Ga0400483_019016 Ga0400483_019016_468_2033 502
245 3300039062 Ga0400483_151533 Ga0400483_151533_417_1982 502
246 3300044712 Ga0453684_0000911 Ga0453684_0000911_67255_68790 502
247 3300044712 Ga0453684_0003558 Ga0453684_0003558_3063_4595 502
248 3300044712 Ga0453684_0020663 Ga0453684_0020663_419_1954 502
249 3300044712 Ga0453684_0035200 Ga0453684_0035200_3870_5402 502
250 3300045051 Ga0451576_0021818 Ga0451576_0021818_4506_6038 502
251 3300045051 Ga0451576_0030839 Ga0451576_0030839_329_1852 502
252 3300045051 Ga0451576_0090525 Ga0451576_0090525_551_2077 502
253 3300046507 Ga0495606_0012209 Ga0495606_0012209_3974_5482 502
254 3300046660 Ga0495625_0013881 Ga0495625_0013881_3194_4747 502
255 3300048918 Ga0496115_0043938 Ga0496115_0043938_372_1880 502
256 3300048928 Ga0496125_0000267 Ga0496125_0000267_99084_100592 502
257 3300048929 Ga0496126_0002233 Ga0496126_0002233_9969_11477 502
258 3300053096 Ga0500641_0000035 Ga0500641_0000035_34165_35673 502
259 3300027526 Ga0209968_1000680 Ga0209968_10006806 503
260 3300032004 Ga0307414_10001937 Ga0307414_100019372 503
261 3300044712 Ga0453684_0066940 Ga0453684_0066940_1339_2859 503
262 3300044712 Ga0453684_0096357 Ga0453684_0096357_565_2118 503
263 3300045051 Ga0451576_0210445 Ga0451576_0210445_350_1903 503
264 3300045051 Ga0451576_0233971 Ga0451576_0233971_32_1552 503
265 3300046501 Ga0495607_0044514 Ga0495607_0044514_135_1646 503
266 2162886007 SwRhRL2b_contig_1894317 SwRhRL2b_0404.00000960 504
267 3300005289 Ga0065704_10073155 Ga0065704_100731553 504
268 3300013104 Ga0157370_10005420 Ga0157370_100054204 504
269 3300015261 Ga0182006_1004717 Ga0182006_10047174 504
270 3300031731 Ga0307405_10000001 Ga0307405_10000001140 504
271 3300031901 Ga0307406_10000300 Ga0307406_1000030016 504
272 3300032004 Ga0307414_10000078 Ga0307414_1000007869 504
273 3300042876 Ga0451577_0000066 Ga0451577_0000066_126150_127766 504
274 3300042876 Ga0451577_0034665 Ga0451577_0034665_2755_4314 504
275 3300044673 Ga0453683_0000010 Ga0453683_0000010_173348_174871 504
276 3300044673 Ga0453683_0001659 Ga0453683_0001659_8536_10152 504
277 3300044673 Ga0453683_0005556 Ga0453683_0005556_3901_5424 504
278 3300044673 Ga0453683_0062994 Ga0453683_0062994_102_1625 504
279 3300044712 Ga0453684_0000199 Ga0453684_0000199_205806_207365 504
280 3300044712 Ga0453684_0000206 Ga0453684_0000206_129885_131501 504
281 3300044712 Ga0453684_0022489 Ga0453684_0022489_888_2411 504
282 3300045051 Ga0451576_0000072 Ga0451576_0000072_129885_131501 504
283 3300045051 Ga0451576_0017943 Ga0451576_0017943_4644_6167 504
284 3300045051 Ga0451576_0038214 Ga0451576_0038214_3097_4620 504

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

20

294

0.94

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

370

435

0.93

PF19269

Anticodon_2

Anticodon binding domain

447

588

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.963 5 504
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.9574 5 504
6b1z-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from elizabethkingia anophelis 0.9464 4 501
6b1z-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from elizabethkingia anophelis 0.9409 4 501
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.89 5 500
ID Description Score Start End Superfamily
6brlA03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9758 255 355 1.10.1160.10
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9681 5 253 3.40.50.620
6brlA03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9572 255 355 1.10.1160.10
5h4vC03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9557 290 355 1.10.1160.10
af_Q9CXJ1_32_362_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9556 2 355 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7R8WUU2-F1-model_v4 Uncharacterized protein 0.9817 98 371 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-V6T048-F1-model_v4 Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS) 0.9807 1 502 GO:0000049
GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270
AF-A0A6B2GC03-F1-model_v4 Glutamate--tRNA ligase 0.9801 378 504 GO:0000049
GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A7Z9IMH9-F1-model_v4 Glutamate--tRNA ligase 0.9798 2 85 GO:0004818
GO:0005524
GO:0006424
AF-A0A6N7MLG8-F1-model_v4 Glutamate--tRNA ligase (EC 6.1.1.17) 0.9793 51 504 GO:0000049
GO:0004818
GO:0005524
GO:0005829
GO:0006424

Feature Viewer

pLDDT pTM Quality
94.72 0.9 High
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Predicted Structure (AlphaFold2)

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