F386407

General Info

Members Datasets Scaffolds Average Seq Length
284 176 568 429

Family's Representative Sequence

Representative Sequence 3300048912|Ga0496109_0172132|Ga0496109_0172132_268_1668
Length 466
Sequence LSHGGLETHANRYHSNPDQMEIANAIVLPAMAFTTDATVVSPARRVAGRTRVPGDKSISHRYAMFGALADGLTTISGYSPGADCATTLACVRALGAGVRQIGDHQFEIDGRGLRGLTAPPGALDAANSGTTIRLMAGILAAHPMRVTMIGDRSLSKRPMQRVIEPLTRMGAHFESDNGRPPLTVEGGDLQPIDFIPAVPSAQVKSAVILAGLQSEGRTSVLEPAATRDHTERALAEFGATVDVEGLKVSIAGGQRLRGCAVTVPGDISSATFWMALAAGTPGGEVEIDGVGLNPSRTAILDIIRRTGATATADVETRGAGEPMGRVRVAFDAPRSFAIEPADVPAIIDEVPALAALAAMLPPGTELTVRGAAELRHKESDRITALALGLRAMGTTIDEFPDGFHLRSAPLHGATVDACDDHRLAMAFAIAATRATGPTTITGASAVDVSYPGFFDTLDRLTRGDGR

Samples

Sample ID Description Type Environment
1 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
173 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.87
Nodule 0
Rhizoplane 7.04
Rhizosphere 88.03
Stem 0
Stem Tuber 0
Unclassified 6.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496109_0172132 3300048912 Bacteria 2032
2 Ga0065715_10109080 3300005293 Bacteria 2682
3 Ga0070676_10059642 3300005328 Bacteria 2264
4 Ga0070683_100011474 3300005329 Bacteria 7662
5 Ga0070690_100019781 3300005330 Bacteria 4094
6 Ga0070670_100214807 3300005331 Bacteria 1673
7 Ga0068869_100054366 3300005334 Bacteria 2915
8 Ga0070666_10100673 3300005335 Unclassified 1991
9 Ga0068868_100103241 3300005338 Bacteria 2309
10 Ga0070689_100056244 3300005340 Bacteria 3050
11 Ga0070692_10044541 3300005345 Bacteria 2286
12 Ga0070669_100001344 3300005353 Bacteria 17724
13 Ga0070669_100122437 3300005353 Bacteria 1986
14 Ga0070675_100000414 3300005354 Bacteria 29137
15 Ga0070675_100081061 3300005354 Bacteria 2706
16 Ga0070671_100008667 3300005355 Bacteria 8161
17 Ga0070674_100017695 3300005356 Bacteria 4491
18 Ga0070673_100004067 3300005364 Bacteria 9211
19 Ga0070688_100062079 3300005365 Bacteria 2365
20 Ga0070688_100116610 3300005365 Bacteria 1783
21 Ga0070667_100067549 3300005367 Bacteria 3040
22 Ga0070667_100112836 3300005367 Unclassified 2358
23 Ga0070714_100044763 3300005435 Bacteria 3748
24 Ga0070701_10050985 3300005438 Bacteria 2146
25 Ga0070705_100031888 3300005440 Bacteria 2922
26 Ga0070678_100163281 3300005456 Unclassified 1807
27 Ga0070662_100062174 3300005457 Bacteria 2727
28 Ga0070662_100093117 3300005457 Unclassified 2266
29 Ga0068867_100085739 3300005459 Bacteria 2381
30 Ga0070707_100000182 3300005468 Bacteria 61765
31 Ga0070684_100021327 3300005535 Bacteria 5389
32 Ga0070697_100049600 3300005536 Bacteria 3407
33 Ga0070672_100020177 3300005543 Bacteria 4857
34 Ga0070672_100043659 3300005543 Bacteria 3458
35 Ga0070672_100101503 3300005543 Bacteria 2334
36 Ga0070695_100002993 3300005545 Bacteria 9847
37 Ga0070695_100015039 3300005545 Bacteria 4670
38 Ga0070665_100004096 3300005548 Bacteria 15330
39 Ga0070704_100046270 3300005549 Bacteria 3033
40 Ga0070704_100074378 3300005549 Bacteria 2478
41 Ga0070664_100090996 3300005564 Unclassified 2641
42 Ga0070664_100093316 3300005564 Unclassified 2608
43 Ga0070664_100231551 3300005564 Bacteria 1656
44 Ga0068857_100025111 3300005577 Bacteria 5248
45 Ga0068854_100033026 3300005578 Bacteria 3605
46 Ga0068852_100163300 3300005616 Bacteria 2081
47 Ga0068859_100009000 3300005617 Bacteria 10085
48 Ga0068859_100129039 3300005617 Bacteria 2599
49 Ga0068864_100073592 3300005618 Unclassified 2979
50 Ga0068861_100032654 3300005719 Bacteria 3834
51 Ga0068863_100020569 3300005841 Bacteria 6308
52 Ga0068863_100094313 3300005841 Bacteria 2840
53 Ga0068858_100063766 3300005842 Bacteria 3409
54 Ga0068862_100026350 3300005844 Unclassified 4885
55 Ga0068862_100030293 3300005844 Bacteria 4559
56 Ga0075365_10033565 3300006038 Bacteria 3308
57 Ga0075365_10037662 3300006038 Bacteria 3140
58 Ga0075368_10020730 3300006042 Bacteria 2491
59 Ga0075364_10005418 3300006051 Bacteria 7411
60 Ga0075367_10005729 3300006178 Bacteria 6206
61 Ga0075367_10032425 3300006178 Bacteria 3006
62 Ga0097621_100004074 3300006237 Bacteria 10140
63 Ga0097621_100050944 3300006237 Bacteria 3368
64 Ga0068871_100001956 3300006358 Bacteria 13947
65 Ga0068871_100071590 3300006358 Bacteria 2852
66 Ga0075428_100012174 3300006844 Bacteria 9567
67 Ga0075428_100092948 3300006844 Bacteria 3288
68 Ga0075428_100133361 3300006844 Unclassified 2701
69 Ga0075430_100003696 3300006846 Bacteria 12853
70 Ga0075431_100007301 3300006847 Bacteria 11007
71 Ga0075431_100087085 3300006847 Bacteria 3223
72 Ga0075433_10024243 3300006852 Bacteria 5118
73 Ga0075433_10052960 3300006852 Bacteria 3537
74 Ga0075433_10059268 3300006852 Bacteria 3349
75 Ga0075433_10198175 3300006852 Bacteria 1786
76 Ga0075434_100006581 3300006871 Bacteria 10658
77 Ga0075434_100147275 3300006871 Unclassified 2375
78 Ga0075429_100069787 3300006880 Bacteria 3059
79 Ga0097620_100009000 3300006931 Bacteria 10085
80 Ga0097620_100129038 3300006931 Bacteria 2599
81 Ga0075435_100001939 3300007076 Bacteria 13481
82 Ga0075435_100011981 3300007076 Bacteria 6405
83 Ga0111539_10000498 3300009094 Bacteria 49981
84 Ga0111539_10126834 3300009094 Bacteria 2989
85 Ga0111539_10280982 3300009094 Bacteria 1937
86 Ga0105245_10003782 3300009098 Bacteria 13463
87 Ga0105245_10063695 3300009098 Bacteria 3330
88 Ga0114129_10003764 3300009147 Bacteria 21384
89 Ga0114129_10005931 3300009147 Bacteria 17290
90 Ga0114129_10006542 3300009147 Bacteria 16534
91 Ga0114129_10008990 3300009147 Bacteria 14249
92 Ga0114129_10036458 3300009147 Bacteria 6944
93 Ga0114129_10124515 3300009147 Bacteria 3545
94 Ga0114129_10245894 3300009147 Bacteria 2403
95 Ga0105242_10011098 3300009176 Bacteria 6924
96 Ga0105248_10044003 3300009177 Bacteria 5008
97 Ga0105248_10046497 3300009177 Bacteria 4865
98 Ga0105248_10058782 3300009177 Bacteria 4318
99 Ga0105248_10096365 3300009177 Bacteria 3332
100 Ga0105248_10135282 3300009177 Unclassified 2780
101 Ga0105248_10211425 3300009177 Bacteria 2186
102 Ga0105249_10003401 3300009553 Bacteria 13783
103 Ga0105249_10296754 3300009553 Bacteria 1619
104 Ga0163162_10144660 3300013306 Bacteria 2492
105 Ga0163163_10004698 3300014325 Bacteria 11698
106 Ga0157376_10111856 3300014969 Bacteria 2405
107 Ga0213876_10073363 3300021384 Bacteria 1807
108 Ga0207697_10004140 3300025315 Bacteria 6995
109 Ga0207697_10049109 3300025315 Unclassified 1741
110 Ga0207642_10045100 3300025899 Bacteria 1955
111 Ga0207688_10021187 3300025901 Bacteria 3551
112 Ga0207645_10007038 3300025907 Bacteria 8007
113 Ga0207645_10124901 3300025907 Bacteria 1672
114 Ga0207662_10022198 3300025918 Bacteria 3636
115 Ga0207646_10000016 3300025922 Bacteria 337048
116 Ga0207681_10009274 3300025923 Bacteria 6011
117 Ga0207659_10000994 3300025926 Bacteria 16859
118 Ga0207659_10067182 3300025926 Bacteria 2604
119 Ga0207659_10093172 3300025926 Bacteria 2254
120 Ga0207687_10138070 3300025927 Bacteria 1846
121 Ga0207664_10189566 3300025929 Bacteria 1769
122 Ga0207644_10039688 3300025931 Bacteria 3324
123 Ga0207706_10073503 3300025933 Bacteria 3006
124 Ga0207706_10101470 3300025933 Unclassified 2532
125 Ga0207706_10129329 3300025933 Bacteria 2221
126 Ga0207706_10138173 3300025933 Unclassified 2144
127 Ga0207686_10008052 3300025934 Bacteria 5687
128 Ga0207686_10060846 3300025934 Bacteria 2392
129 Ga0207709_10025703 3300025935 Bacteria 3373
130 Ga0207709_10062987 3300025935 Unclassified 2323
131 Ga0207669_10041104 3300025937 Bacteria 2688
132 Ga0207704_10006485 3300025938 Bacteria 5460
133 Ga0207704_10074756 3300025938 Bacteria 2164
134 Ga0207691_10005426 3300025940 Bacteria 12309
135 Ga0207691_10114389 3300025940 Bacteria 2397
136 Ga0207711_10092189 3300025941 Bacteria 2666
137 Ga0207711_10130914 3300025941 Bacteria 2249
138 Ga0207711_10201613 3300025941 Bacteria 1815
139 Ga0207689_10025520 3300025942 Bacteria 4952
140 Ga0207661_10027841 3300025944 Bacteria 4322
141 Ga0207679_10020811 3300025945 Bacteria 4435
142 Ga0207679_10135410 3300025945 Bacteria 1983
143 Ga0207651_10005278 3300025960 Bacteria 6609
144 Ga0207712_10051571 3300025961 Bacteria 2878
145 Ga0207640_10044193 3300025981 Bacteria 2853
146 Ga0207640_10072683 3300025981 Bacteria 2321
147 Ga0207677_10040456 3300026023 Bacteria 3073
148 Ga0207678_10113874 3300026067 Bacteria 2308
149 Ga0207708_10112043 3300026075 Bacteria 2119
150 Ga0207641_10096139 3300026088 Bacteria 2601
151 Ga0207648_10015206 3300026089 Bacteria 7082
152 Ga0207648_10031479 3300026089 Bacteria 4691
153 Ga0207675_100089506 3300026118 Bacteria 2893
154 Ga0207675_100169178 3300026118 Bacteria 2088
155 Ga0207683_10024452 3300026121 Bacteria 5204
156 Ga0207428_10008703 3300027907 Bacteria 9158
157 Ga0268265_10016141 3300028380 Bacteria 5126
158 Ga0268265_10206768 3300028380 Bacteria 1707
159 Ga0265314_10033627 3300031711 Bacteria 3756
160 Ga0307407_10048722 3300031903 Bacteria 2414
161 Ga0307407_10054789 3300031903 Bacteria 2302
162 Ga0307412_10041954 3300031911 Bacteria 2969
163 Ga0307409_100053548 3300031995 Bacteria 3101
164 Ga0307416_100094488 3300032002 Bacteria 2578
165 Ga0307414_10032794 3300032004 Bacteria 3425
166 Ga0307415_100017474 3300032126 Bacteria 4303
167 Ga0373936_0076820 3300035113 Bacteria 1385
168 Ga0373961_0016035 3300035241 Bacteria 1926
169 Ga0373937_0143116 3300036401 Bacteria 2238
170 Ga0373937_0313913 3300036401 Bacteria 1483
171 Ga0373925_0026940 3300037068 Bacteria 4208
172 Ga0395905_0014744 3300037471 Bacteria 7452
173 Ga0400489_45530 3300039093 Bacteria 61531
174 Ga0436365_1763345 3300039437 Bacteria 2335
175 Ga0439464_0034296 3300042439 Bacteria 1431
176 Ga0451577_0067367 3300042876 Bacteria 3193
177 Ga0453683_0029815 3300044673 Bacteria 3448
178 Ga0453684_0029710 3300044712 Bacteria 7749
179 Ga0451576_0043286 3300045051 Bacteria 4752
180 Ga0495603_0025640 3300046455 Unclassified 3565
181 Ga0495580_0016204 3300046472 Bacteria 5601
182 Ga0495608_0099682 3300046511 Bacteria 1874
183 Ga0495608_0160323 3300046511 Bacteria 1431
184 Ga0495586_0073055 3300046535 Bacteria 1876
185 Ga0495635_0154393 3300046663 Bacteria 1563
186 Ga0495623_0070250 3300046679 Bacteria 2182
187 Ga0495647_0043056 3300046681 Bacteria 1726
188 Ga0495647_0053695 3300046681 Bacteria 1572
189 Ga0495676_0013826 3300047321 Bacteria 7237
190 Ga0496100_0005145 3300048903 Bacteria 7013
191 Ga0496101_0003427 3300048904 Bacteria 9890
192 Ga0496102_0315469 3300048905 Bacteria 1473
193 Ga0496104_0002860 3300048907 Bacteria 14873
194 Ga0496104_0020777 3300048907 Bacteria 6021
195 Ga0496105_0146495 3300048908 Bacteria 1942
196 Ga0496105_0185768 3300048908 Bacteria 1701
197 Ga0496106_0011423 3300048909 Bacteria 6571
198 Ga0496106_0056738 3300048909 Bacteria 2961
199 Ga0496106_0108619 3300048909 Bacteria 2158
200 Ga0496107_0106597 3300048910 Bacteria 2058
201 Ga0496108_0045020 3300048911 Bacteria 3684
202 Ga0496109_0092477 3300048912 Bacteria 2798
203 Ga0496110_0006229 3300048913 Bacteria 9408
204 Ga0496111_0077901 3300048914 Bacteria 2417
205 Ga0496113_0122719 3300048916 Bacteria 2033
206 Ga0496113_0165208 3300048916 Unclassified 1751
207 Ga0496114_0001335 3300048917 Bacteria 18695
208 Ga0496114_0486963 3300048917 Bacteria 1091
209 Ga0501031_0078330 3300049568 Bacteria 2154
210 Ga0501034_0007959 3300049571 Bacteria 11259
211 Ga0501034_0025381 3300049571 Bacteria 6033
212 Ga0501036_0015234 3300049572 Bacteria 6421
213 Ga0501036_0029783 3300049572 Bacteria 4613
214 Ga0501036_0044882 3300049572 Bacteria 3745
215 Ga0501038_0011589 3300049574 Bacteria 8044
216 Ga0501040_0010868 3300049576 Bacteria 5951
217 Ga0501040_0108261 3300049576 Bacteria 1943
218 Ga0501041_0000880 3300049577 Bacteria 16230
219 Ga0501042_0007989 3300049578 Bacteria 6964
220 Ga0501042_0040798 3300049578 Bacteria 3299
221 Ga0501042_0060917 3300049578 Bacteria 2696
222 Ga0501046_0018350 3300049580 Bacteria 5823
223 Ga0501047_0159354 3300049581 Bacteria 2129
224 Ga0501048_0012859 3300049582 Bacteria 6218
225 Ga0501048_0034624 3300049582 Bacteria 3642
226 Ga0501048_0052034 3300049582 Bacteria 2914
227 Ga0501048_0106911 3300049582 Bacteria 1975
228 Ga0501071_0008245 3300049587 Bacteria 6878
229 Ga0501071_0070440 3300049587 Bacteria 2547
230 Ga0501072_0029224 3300049588 Bacteria 4304
231 Ga0501072_0035491 3300049588 Bacteria 3905
232 Ga0501072_0074247 3300049588 Bacteria 2689
233 Ga0501075_0003214 3300049591 Bacteria 10931
234 Ga0501075_0017488 3300049591 Bacteria 5180
235 Ga0501075_0051700 3300049591 Bacteria 3090
236 Ga0501075_0062059 3300049591 Bacteria 2817
237 Ga0501076_0000562 3300049592 Bacteria 23674
238 Ga0501076_0002651 3300049592 Bacteria 12349
239 Ga0501076_0009856 3300049592 Bacteria 7063
240 Ga0501077_0017502 3300049593 Bacteria 4525
241 Ga0501079_0036590 3300049741 Unclassified 3782
242 Ga0501080_0020011 3300049742 Bacteria 6195
243 Ga0501081_0000246 3300049743 Bacteria 27807
244 Ga0501081_0014395 3300049743 Bacteria 5218
245 Ga0501081_0048956 3300049743 Bacteria 2909
246 Ga0501044_0005089 3300049823 Bacteria 14664
247 Ga0501045_0015103 3300049824 Bacteria 5481
248 Ga0501045_0113841 3300049824 Bacteria 2006
249 nmdc:mga03683_2263_c1 3300050489 Bacteria 5939
250 nmdc:mga00v17_12599_c1 3300050491 Bacteria 4669
251 nmdc:mga0yw44_30641_c1 3300050492 Bacteria 3120
252 nmdc:mga0k408_15252_c1 3300050493 Bacteria 4246
253 nmdc:mga07m45_12370_c1 3300050496 Bacteria 4234
254 nmdc:mga05p37_122258_c1 3300050507 Bacteria 3197
255 nmdc:mga05p37_222911_c1 3300050507 Bacteria 2275
256 nmdc:mga05p37_312746_c1 3300050507 Bacteria 1861
257 nmdc:mga05p37_44993_c1 3300050507 Bacteria 5431
258 nmdc:mga05p37_48100_c1 3300050507 Bacteria 5246
259 nmdc:mga05p37_55527_c1 3300050507 Bacteria 4874
260 nmdc:mga05p37_5732_c1 3300050507 Bacteria 14605
261 nmdc:mga09592_69741_c1 3300050508 Bacteria 2982
262 nmdc:mga06r32_40444_c1 3300050510 Bacteria 4427
263 nmdc:mga08y16_6637_c1 3300050511 Bacteria 12141
264 nmdc:mga0n895_162787_c1 3300050512 Bacteria 2263
265 nmdc:mga0n895_73631_c1 3300050512 Bacteria 3392
266 nmdc:mga0rr50_27081_c1 3300050513 Bacteria 4009
267 nmdc:mga0rr50_4306_c1 3300050513 Bacteria 8339
268 nmdc:mga0rr50_5856_c1 3300050513 Bacteria 7392
269 nmdc:mga0a205_23780_c1 3300050515 Bacteria 5815
270 nmdc:mga0a205_28869_c1 3300050515 Bacteria 5304
271 nmdc:mga0a205_59027_c1 3300050515 Bacteria 3706
272 nmdc:mga0a205_62814_c1 3300050515 Bacteria 3588
273 Ga0495619_0050248 3300053085 Bacteria 2752
274 Ga0495619_0160162 3300053085 Bacteria 1554
275 Ga0495619_0228296 3300053085 Bacteria 1290
276 Ga0501084_0002743 3300054114 Bacteria 14212
277 Ga0590071_002366 3300059421 Bacteria 4754
278 Ga0590075_003720 3300059424 Bacteria 3621
279 Ga0590077_002916 3300059426 Bacteria 3588
280 Ga0501082_0008967 3300060353 Bacteria 8634
281 Ga0501082_0063913 3300060353 Bacteria 3169
282 Ga0501082_0074048 3300060353 Bacteria 2933
283 Ga0530510_0050936 3300061734 Bacteria 2991
284 Ga0530510_0062646 3300061734 Unclassified 2692
285 Ga0496109_0172132
286 Ga0065715_10109080
287 Ga0070676_10059642
288 Ga0070683_100011474
289 Ga0070690_100019781
290 Ga0070670_100214807
291 Ga0068869_100054366
292 Ga0070666_10100673
293 Ga0068868_100103241
294 Ga0070689_100056244
295 Ga0070692_10044541
296 Ga0070669_100001344
297 Ga0070669_100122437
298 Ga0070675_100000414
299 Ga0070675_100081061
300 Ga0070671_100008667
301 Ga0070674_100017695
302 Ga0070673_100004067
303 Ga0070688_100062079
304 Ga0070688_100116610
305 Ga0070667_100067549
306 Ga0070667_100112836
307 Ga0070714_100044763
308 Ga0070701_10050985
309 Ga0070705_100031888
310 Ga0070678_100163281
311 Ga0070662_100062174
312 Ga0070662_100093117
313 Ga0068867_100085739
314 Ga0070707_100000182
315 Ga0070684_100021327
316 Ga0070697_100049600
317 Ga0070672_100020177
318 Ga0070672_100043659
319 Ga0070672_100101503
320 Ga0070695_100002993
321 Ga0070695_100015039
322 Ga0070665_100004096
323 Ga0070704_100046270
324 Ga0070704_100074378
325 Ga0070664_100090996
326 Ga0070664_100093316
327 Ga0070664_100231551
328 Ga0068857_100025111
329 Ga0068854_100033026
330 Ga0068852_100163300
331 Ga0068859_100009000
332 Ga0068859_100129039
333 Ga0068864_100073592
334 Ga0068861_100032654
335 Ga0068863_100020569
336 Ga0068863_100094313
337 Ga0068858_100063766
338 Ga0068862_100026350
339 Ga0068862_100030293
340 Ga0075365_10033565
341 Ga0075365_10037662
342 Ga0075368_10020730
343 Ga0075364_10005418
344 Ga0075367_10005729
345 Ga0075367_10032425
346 Ga0097621_100004074
347 Ga0097621_100050944
348 Ga0068871_100001956
349 Ga0068871_100071590
350 Ga0075428_100012174
351 Ga0075428_100092948
352 Ga0075428_100133361
353 Ga0075430_100003696
354 Ga0075431_100007301
355 Ga0075431_100087085
356 Ga0075433_10024243
357 Ga0075433_10052960
358 Ga0075433_10059268
359 Ga0075433_10198175
360 Ga0075434_100006581
361 Ga0075434_100147275
362 Ga0075429_100069787
363 Ga0097620_100009000
364 Ga0097620_100129038
365 Ga0075435_100001939
366 Ga0075435_100011981
367 Ga0111539_10000498
368 Ga0111539_10126834
369 Ga0111539_10280982
370 Ga0105245_10003782
371 Ga0105245_10063695
372 Ga0114129_10003764
373 Ga0114129_10005931
374 Ga0114129_10006542
375 Ga0114129_10008990
376 Ga0114129_10036458
377 Ga0114129_10124515
378 Ga0114129_10245894
379 Ga0105242_10011098
380 Ga0105248_10044003
381 Ga0105248_10046497
382 Ga0105248_10058782
383 Ga0105248_10096365
384 Ga0105248_10135282
385 Ga0105248_10211425
386 Ga0105249_10003401
387 Ga0105249_10296754
388 Ga0163162_10144660
389 Ga0163163_10004698
390 Ga0157376_10111856
391 Ga0213876_10073363
392 Ga0207697_10004140
393 Ga0207697_10049109
394 Ga0207642_10045100
395 Ga0207688_10021187
396 Ga0207645_10007038
397 Ga0207645_10124901
398 Ga0207662_10022198
399 Ga0207646_10000016
400 Ga0207681_10009274
401 Ga0207659_10000994
402 Ga0207659_10067182
403 Ga0207659_10093172
404 Ga0207687_10138070
405 Ga0207664_10189566
406 Ga0207644_10039688
407 Ga0207706_10073503
408 Ga0207706_10101470
409 Ga0207706_10129329
410 Ga0207706_10138173
411 Ga0207686_10008052
412 Ga0207686_10060846
413 Ga0207709_10025703
414 Ga0207709_10062987
415 Ga0207669_10041104
416 Ga0207704_10006485
417 Ga0207704_10074756
418 Ga0207691_10005426
419 Ga0207691_10114389
420 Ga0207711_10092189
421 Ga0207711_10130914
422 Ga0207711_10201613
423 Ga0207689_10025520
424 Ga0207661_10027841
425 Ga0207679_10020811
426 Ga0207679_10135410
427 Ga0207651_10005278
428 Ga0207712_10051571
429 Ga0207640_10044193
430 Ga0207640_10072683
431 Ga0207677_10040456
432 Ga0207678_10113874
433 Ga0207708_10112043
434 Ga0207641_10096139
435 Ga0207648_10015206
436 Ga0207648_10031479
437 Ga0207675_100089506
438 Ga0207675_100169178
439 Ga0207683_10024452
440 Ga0207428_10008703
441 Ga0268265_10016141
442 Ga0268265_10206768
443 Ga0265314_10033627
444 Ga0307407_10048722
445 Ga0307407_10054789
446 Ga0307412_10041954
447 Ga0307409_100053548
448 Ga0307416_100094488
449 Ga0307414_10032794
450 Ga0307415_100017474
451 Ga0373936_0076820
452 Ga0373961_0016035
453 Ga0373937_0143116
454 Ga0373937_0313913
455 Ga0373925_0026940
456 Ga0395905_0014744
457 Ga0400489_45530
458 Ga0436365_1763345
459 Ga0439464_0034296
460 Ga0451577_0067367
461 Ga0453683_0029815
462 Ga0453684_0029710
463 Ga0451576_0043286
464 Ga0495603_0025640
465 Ga0495580_0016204
466 Ga0495608_0099682
467 Ga0495608_0160323
468 Ga0495586_0073055
469 Ga0495635_0154393
470 Ga0495623_0070250
471 Ga0495647_0043056
472 Ga0495647_0053695
473 Ga0495676_0013826
474 Ga0496100_0005145
475 Ga0496101_0003427
476 Ga0496102_0315469
477 Ga0496104_0002860
478 Ga0496104_0020777
479 Ga0496105_0146495
480 Ga0496105_0185768
481 Ga0496106_0011423
482 Ga0496106_0056738
483 Ga0496106_0108619
484 Ga0496107_0106597
485 Ga0496108_0045020
486 Ga0496109_0092477
487 Ga0496110_0006229
488 Ga0496111_0077901
489 Ga0496113_0122719
490 Ga0496113_0165208
491 Ga0496114_0001335
492 Ga0496114_0486963
493 Ga0501031_0078330
494 Ga0501034_0007959
495 Ga0501034_0025381
496 Ga0501036_0015234
497 Ga0501036_0029783
498 Ga0501036_0044882
499 Ga0501038_0011589
500 Ga0501040_0010868
501 Ga0501040_0108261
502 Ga0501041_0000880
503 Ga0501042_0007989
504 Ga0501042_0040798
505 Ga0501042_0060917
506 Ga0501046_0018350
507 Ga0501047_0159354
508 Ga0501048_0012859
509 Ga0501048_0034624
510 Ga0501048_0052034
511 Ga0501048_0106911
512 Ga0501071_0008245
513 Ga0501071_0070440
514 Ga0501072_0029224
515 Ga0501072_0035491
516 Ga0501072_0074247
517 Ga0501075_0003214
518 Ga0501075_0017488
519 Ga0501075_0051700
520 Ga0501075_0062059
521 Ga0501076_0000562
522 Ga0501076_0002651
523 Ga0501076_0009856
524 Ga0501077_0017502
525 Ga0501079_0036590
526 Ga0501080_0020011
527 Ga0501081_0000246
528 Ga0501081_0014395
529 Ga0501081_0048956
530 Ga0501044_0005089
531 Ga0501045_0015103
532 Ga0501045_0113841
533 nmdc:mga03683_2263_c1
534 nmdc:mga00v17_12599_c1
535 nmdc:mga0yw44_30641_c1
536 nmdc:mga0k408_15252_c1
537 nmdc:mga07m45_12370_c1
538 nmdc:mga05p37_122258_c1
539 nmdc:mga05p37_222911_c1
540 nmdc:mga05p37_312746_c1
541 nmdc:mga05p37_44993_c1
542 nmdc:mga05p37_48100_c1
543 nmdc:mga05p37_55527_c1
544 nmdc:mga05p37_5732_c1
545 nmdc:mga09592_69741_c1
546 nmdc:mga06r32_40444_c1
547 nmdc:mga08y16_6637_c1
548 nmdc:mga0n895_162787_c1
549 nmdc:mga0n895_73631_c1
550 nmdc:mga0rr50_27081_c1
551 nmdc:mga0rr50_4306_c1
552 nmdc:mga0rr50_5856_c1
553 nmdc:mga0a205_23780_c1
554 nmdc:mga0a205_28869_c1
555 nmdc:mga0a205_59027_c1
556 nmdc:mga0a205_62814_c1
557 Ga0495619_0050248
558 Ga0495619_0160162
559 Ga0495619_0228296
560 Ga0501084_0002743
561 Ga0590071_002366
562 Ga0590075_003720
563 Ga0590077_002916
564 Ga0501082_0008967
565 Ga0501082_0063913
566 Ga0501082_0074048
567 Ga0530510_0050936
568 Ga0530510_0062646

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00275

EPSP_synthase

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)

40

457

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tr1-assembly1.cif.gz_A structure of a 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii 0.9714 8 431
3slh-assembly3.cif.gz_C 1.70 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii in complex with shikimate-3-phosphate and glyphosate 0.9684 8 431
4egr-assembly2.cif.gz_B 2.50 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii in complex with phosphoenolpyruvate 0.9677 8 433
2pqc-assembly1.cif.gz_A cp4 epsps liganded with (r)-phosphonate tetrahedral reaction intermediate analog 0.9475 6 431
1rf4-assembly1.cif.gz_A structural studies of streptococcus pneumoniae epsp synthase, tetrahedral intermediate bound state 0.9472 7 430
ID Description Score Start End Superfamily
3slhA02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.965 25 235 3.65.10.10
3slhA02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9605 25 235 3.65.10.10
3rmtC02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9602 25 235 3.65.10.10
3rmtC02 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9557 25 235 3.65.10.10
af_Q05615_22_211_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9433 24 216 3.65.10.10
ID Description Score Start End GO Terms
AF-A0A381T236-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.9866 6 432 GO:0003866
GO:0008652
GO:0009073
GO:0009423
AF-A0A3N5ZFR5-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.9863 296 430 GO:0003866
GO:0009423
AF-A0A7Y5U2E8-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) 0.9837 7 360 GO:0003866
GO:0008652
GO:0009073
GO:0009423
AF-A0A1F2R0I6-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) 0.9819 6 431 GO:0003866
GO:0005737
GO:0008652
GO:0009073
GO:0009423
AF-A0A2V8F6Z9-F1-model_v4 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) 0.9787 1 434 GO:0003866
GO:0005737
GO:0008652
GO:0009073
GO:0009423

Map