F386303

General Info

Members Datasets Scaffolds Average Seq Length
284 139 568 495

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0093430|Ga0395899_0093430_37_1842
Length 579
Sequence VLTDVLLQLAATRLNSTSVELPLRGSSPRGRAHRNANECGGSTEPGADMLRLGHDRPDHLQGRVDQYFFLDAIRKLFCTSSSSATKPLVVNAGTMTLLADVAKASSEVTETRSRSRKIAVLAELLRRLDPDEVPLAAGFLAGVPRQGRVGVGYSTIYGIEPAPAAEPSLTIRDVDRAIAEIQASTGSGSAGRRKAVLAELLGRATAQEADFVRRLFTGELRQGALAGLMIDAVAKAEIAMTTGEEGLLSVGFEIFRPILPMLASTAESVGEAVAGFERSSVEWKLDGIRIQIHCRGEEVRIYTRNLNEITATLPGIVAALRGLPVRQAVFDGEALWMGDGGPAAFQDTVSRIGGEAPPEGVVTFLFDLLHVDGDDLLDTPLEQRAARLEAIAPDLRISATLTSDVEDAQRVLDEALEAGHEGVVVKDAASLYAAGRRGKAWRKVKPVKTYDLVVLGAEWGHGRRQGWLSNLHLGARDPATGAFVMVGKTFKGLTDELLEWQTKALLERETARQGITVFVRPELVIEIALDGVQSSTRYPGGVALRFARVKRYRPDKNADEADTIDELRALLPVRSSPGS

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.1
Rhizosphere 86.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0093430 3300037312 Bacteria 2177
2 JGI25407J50210_10000129 3300003373 Bacteria 11199
3 Ga0070680_100004050 3300005336 Bacteria 10967
4 Ga0070687_100002863 3300005343 Bacteria 6595
5 Ga0070703_10003526 3300005406 Bacteria 4450
6 Ga0070713_100006981 3300005436 Bacteria 7883
7 Ga0070713_100049144 3300005436 Bacteria 3478
8 Ga0070710_10000866 3300005437 Bacteria 14498
9 Ga0070701_10027880 3300005438 Bacteria 2772
10 Ga0070711_100067235 3300005439 Bacteria 2513
11 Ga0070705_100005117 3300005440 Bacteria 6369
12 Ga0070705_100111822 3300005440 Bacteria 1747
13 Ga0070694_100001414 3300005444 Bacteria 14054
14 Ga0070694_100032017 3300005444 Bacteria 3451
15 Ga0070708_100102614 3300005445 Bacteria 2621
16 Ga0070706_100006351 3300005467 Bacteria 11166
17 Ga0070706_100031542 3300005467 Bacteria 4886
18 Ga0070698_100001521 3300005471 Bacteria 25715
19 Ga0070684_100040666 3300005535 Bacteria 4005
20 Ga0070686_100071930 3300005544 Bacteria 2266
21 Ga0070704_100024906 3300005549 Bacteria 3931
22 Ga0070704_100125447 3300005549 Bacteria 1980
23 Ga0070702_100015246 3300005615 Bacteria 3920
24 Ga0081455_10003080 3300005937 Bacteria 19429
25 Ga0081455_10006277 3300005937 Bacteria 12781
26 Ga0081455_10043211 3300005937 Bacteria 3945
27 Ga0081455_10051940 3300005937 Bacteria 3513
28 Ga0081538_10000013 3300005981 Bacteria 151925
29 Ga0081538_10000063 3300005981 Bacteria 99624
30 Ga0081538_10000167 3300005981 Bacteria 70351
31 Ga0081538_10000603 3300005981 Bacteria 39795
32 Ga0081538_10000753 3300005981 Bacteria 35354
33 Ga0081538_10000785 3300005981 Bacteria 34657
34 Ga0081538_10000992 3300005981 Bacteria 30125
35 Ga0081538_10001046 3300005981 Bacteria 29493
36 Ga0081538_10001327 3300005981 Bacteria 25495
37 Ga0081538_10001929 3300005981 Bacteria 20791
38 Ga0081538_10002269 3300005981 Bacteria 19012
39 Ga0081538_10003343 3300005981 Bacteria 15188
40 Ga0081538_10008083 3300005981 Bacteria 8981
41 Ga0081538_10010181 3300005981 Bacteria 7728
42 Ga0081538_10012456 3300005981 Bacteria 6815
43 Ga0081538_10056346 3300005981 Bacteria 2303
44 Ga0081540_1027510 3300005983 Bacteria 3219
45 Ga0070717_10041095 3300006028 Bacteria 3769
46 Ga0075432_10035271 3300006058 Bacteria 1738
47 Ga0070716_100001815 3300006173 Bacteria 9665
48 Ga0070712_100010685 3300006175 Bacteria 5797
49 Ga0070712_100021570 3300006175 Bacteria 4232
50 Ga0070712_100050913 3300006175 Bacteria 2884
51 Ga0075428_100001400 3300006844 Bacteria 25647
52 Ga0075430_100026938 3300006846 Bacteria 4888
53 Ga0075431_100078678 3300006847 Bacteria 3403
54 Ga0075431_100083657 3300006847 Bacteria 3294
55 Ga0075431_100104189 3300006847 Bacteria 2928
56 Ga0075433_10008601 3300006852 Bacteria 8145
57 Ga0075433_10024232 3300006852 Bacteria 5119
58 Ga0075433_10044773 3300006852 Bacteria 3845
59 Ga0075433_10052502 3300006852 Bacteria 3552
60 Ga0075434_100001273 3300006871 Bacteria 21005
61 Ga0075434_100008008 3300006871 Bacteria 9795
62 Ga0075434_100027858 3300006871 Bacteria 5547
63 Ga0075434_100199326 3300006871 Bacteria 2021
64 Ga0075429_100038407 3300006880 Bacteria 4167
65 Ga0075436_100003446 3300006914 Bacteria 10845
66 Ga0075436_100140421 3300006914 Bacteria 1697
67 Ga0075435_100025076 3300007076 Bacteria 4637
68 Ga0075435_100223692 3300007076 Bacteria 1598
69 Ga0075435_100233061 3300007076 Bacteria 1564
70 Ga0099794_10000018 3300007265 Bacteria 74076
71 Ga0111539_10002177 3300009094 Bacteria 26179
72 Ga0111539_10018365 3300009094 Bacteria 8662
73 Ga0111539_10059268 3300009094 Bacteria 4540
74 Ga0111539_10252761 3300009094 Bacteria 2052
75 Ga0105245_10037243 3300009098 Bacteria 4325
76 Ga0114129_10004745 3300009147 Bacteria 19205
77 Ga0114129_10012078 3300009147 Bacteria 12293
78 Ga0114129_10027711 3300009147 Bacteria 8021
79 Ga0114129_10031541 3300009147 Bacteria 7490
80 Ga0114129_10039733 3300009147 Bacteria 6636
81 Ga0114129_10048756 3300009147 Bacteria 5952
82 Ga0114129_10104874 3300009147 Bacteria 3907
83 Ga0114129_10338995 3300009147 Bacteria 1994
84 Ga0105243_10093968 3300009148 Bacteria 2476
85 Ga0213876_10011683 3300021384 Bacteria 4688
86 Ga0213876_10023238 3300021384 Bacteria 3275
87 Ga0207653_10000220 3300025885 Bacteria 37988
88 Ga0207692_10006707 3300025898 Bacteria 4680
89 Ga0207693_10000758 3300025915 Bacteria 28989
90 Ga0207693_10088344 3300025915 Bacteria 2429
91 Ga0207663_10059741 3300025916 Bacteria 2413
92 Ga0207652_10132889 3300025921 Bacteria 2220
93 Ga0207700_10000001 3300025928 Bacteria 1122509
94 Ga0207700_10082239 3300025928 Bacteria 2517
95 Ga0207700_10097566 3300025928 Bacteria 2336
96 Ga0207664_10013629 3300025929 Bacteria 5844
97 Ga0207664_10014733 3300025929 Bacteria 5657
98 Ga0207665_10003348 3300025939 Bacteria 10735
99 Ga0207708_10093593 3300026075 Bacteria 2319
100 Ga0207675_100091049 3300026118 Bacteria 2868
101 Ga0209588_1000214 3300027671 Bacteria 15625
102 Ga0209588_1000630 3300027671 Bacteria 8908
103 Ga0207428_10001543 3300027907 Bacteria 24104
104 Ga0207428_10006103 3300027907 Bacteria 11139
105 Ga0207428_10033927 3300027907 Bacteria 4186
106 Ga0207428_10103906 3300027907 Bacteria 2193
107 Ga0307408_100028237 3300031548 Bacteria 3876
108 Ga0307405_10014343 3300031731 Bacteria 4258
109 Ga0307405_10033842 3300031731 Bacteria 3036
110 Ga0307410_10023176 3300031852 Bacteria 3854
111 Ga0307412_10062991 3300031911 Bacteria 2500
112 Ga0307409_100009087 3300031995 Bacteria 6084
113 Ga0307409_100026357 3300031995 Bacteria 4098
114 Ga0307409_100066815 3300031995 Bacteria 2837
115 Ga0307416_100051385 3300032002 Bacteria 3292
116 Ga0307416_100112877 3300032002 Bacteria 2400
117 Ga0307415_100048240 3300032126 Bacteria 2872
118 Ga0373927_0011720 3300035695 Bacteria 5837
119 Ga0373933_0035860 3300035724 Bacteria 2900
120 Ga0373947_0013019 3300035725 Bacteria 4769
121 Ga0373937_0141083 3300036401 Bacteria 2254
122 Ga0395899_0009158 3300037312 Bacteria 7605
123 Ga0395899_0057730 3300037312 Bacteria 2864
124 Ga0395899_0063278 3300037312 Bacteria 2722
125 Ga0395899_0073511 3300037312 Bacteria 2499
126 Ga0395900_0028810 3300037418 Bacteria 5692
127 Ga0395900_0055994 3300037418 Bacteria 4059
128 Ga0395900_0061725 3300037418 Bacteria 3853
129 Ga0395900_0087904 3300037418 Bacteria 3194
130 Ga0395900_0093568 3300037418 Bacteria 3087
131 Ga0395900_0094240 3300037418 Bacteria 3075
132 Ga0395900_0105263 3300037418 Bacteria 2898
133 Ga0395900_0155965 3300037418 Bacteria 2331
134 Ga0395900_0183119 3300037418 Bacteria 2127
135 Ga0395900_0292878 3300037418 Bacteria 1616
136 Ga0395898_0000723 3300037466 Bacteria 58117
137 Ga0395898_0015538 3300037466 Bacteria 7807
138 Ga0395898_0019921 3300037466 Bacteria 6822
139 Ga0395898_0036227 3300037466 Bacteria 4900
140 Ga0395898_0039697 3300037466 Bacteria 4657
141 Ga0395898_0092084 3300037466 Bacteria 2915
142 Ga0395898_0100599 3300037466 Bacteria 2776
143 Ga0395905_0002012 3300037471 Bacteria 23225
144 Ga0395905_0002667 3300037471 Bacteria 19578
145 Ga0395905_0002836 3300037471 Bacteria 18983
146 Ga0395905_0006393 3300037471 Bacteria 11872
147 Ga0395905_0032331 3300037471 Bacteria 4921
148 Ga0395905_0101535 3300037471 Bacteria 2700
149 Ga0395905_0122733 3300037471 Bacteria 2442
150 Ga0395905_0147970 3300037471 Bacteria 2210
151 Ga0436364_0028511 3300037853 Bacteria 42380
152 Ga0436364_0044226 3300037853 Bacteria 1797
153 Ga0436364_0325851 3300037853 Bacteria 7243
154 Ga0436364_1379421 3300037853 Bacteria 15079
155 Ga0436364_1401109 3300037853 Bacteria 3386
156 Ga0395901_0006696 3300038443 Bacteria 11643
157 Ga0395901_0021929 3300038443 Bacteria 6547
158 Ga0395901_0045729 3300038443 Bacteria 4544
159 Ga0395901_0069165 3300038443 Bacteria 3676
160 Ga0395901_0094110 3300038443 Bacteria 3138
161 Ga0395901_0111703 3300038443 Bacteria 2870
162 Ga0436365_0114229 3300039437 Bacteria 16351
163 Ga0436365_0269938 3300039437 Bacteria 23611
164 Ga0436365_0439231 3300039437 Bacteria 18529
165 Ga0436365_0757770 3300039437 Bacteria 17434
166 Ga0436365_1100216 3300039437 Bacteria 34616
167 Ga0436365_1725271 3300039437 Bacteria 17905
168 Ga0436360_0977432 3300039438 Bacteria 2178
169 Ga0436363_0071414 3300039450 Bacteria 5291
170 Ga0436363_0330399 3300039450 Bacteria 2576
171 Ga0436363_0751996 3300039450 Bacteria 2263
172 Ga0436362_0587159 3300039453 Bacteria 4606
173 Ga0466961_0013895 3300044693 Archaea 5158
174 Ga0466963_0009057 3300044694 Bacteria 5982
175 Ga0466963_0010223 3300044694 Bacteria 5675
176 Ga0466963_0054856 3300044694 Bacteria 2650
177 Ga0466963_0058353 3300044694 Bacteria 2573
178 Ga0466964_0035696 3300044706 Bacteria 1990
179 Ga0466970_0020579 3300044765 Bacteria 3430
180 Ga0466970_0033700 3300044765 Bacteria 2708
181 Ga0466957_0021164 3300044842 Bacteria 3830
182 Ga0466959_0010932 3300045049 Bacteria 6510
183 Ga0466959_0016590 3300045049 Bacteria 5385
184 Ga0466959_0051756 3300045049 Bacteria 3010
185 Ga0451576_0004818 3300045051 Bacteria 17287
186 Ga0451576_0013278 3300045051 Bacteria 9216
187 Ga0451576_0063671 3300045051 Bacteria 3843
188 Ga0466958_0000645 3300045836 Bacteria 15023
189 Ga0466958_0005749 3300045836 Bacteria 6703
190 Ga0466958_0045402 3300045836 Bacteria 2650
191 Ga0466958_0093984 3300045836 Bacteria 1857
192 Ga0466967_0005577 3300045976 Bacteria 8748
193 Ga0466967_0126276 3300045976 Bacteria 2370
194 Ga0466967_0205921 3300045976 Bacteria 1865
195 Ga0495651_0047365 3300046462 Bacteria 3324
196 Ga0495653_0010527 3300046463 Bacteria 7573
197 Ga0495608_0000984 3300046511 Bacteria 20114
198 Ga0495628_0030762 3300046516 Bacteria 4346
199 Ga0495628_0030935 3300046516 Bacteria 4331
200 Ga0495652_0042826 3300046529 Bacteria 3903
201 Ga0495587_0016810 3300046536 Bacteria 4549
202 Ga0495634_0034647 3300046642 Bacteria 3463
203 Ga0495659_0046466 3300046664 Bacteria 1567
204 Ga0495657_0000881 3300046675 Bacteria 26485
205 Ga0495599_0004832 3300046678 Bacteria 8017
206 Ga0495613_0040866 3300046689 Bacteria 3435
207 Ga0495600_0003983 3300046809 Bacteria 8778
208 Ga0495604_0001963 3300047317 Bacteria 16601
209 Ga0495674_0005784 3300047319 Bacteria 11855
210 Ga0495680_0007665 3300047322 Bacteria 9859
211 Ga0495680_0096092 3300047322 Bacteria 2214
212 Ga0495684_0022444 3300047471 Bacteria 4855
213 Ga0495684_0022949 3300047471 Bacteria 4800
214 Ga0495602_0028826 3300048088 Bacteria 5304
215 Ga0496100_0095150 3300048903 Bacteria 2041
216 Ga0496101_0013633 3300048904 Bacteria 5452
217 Ga0496104_0000278 3300048907 Bacteria 45634
218 Ga0496104_0032904 3300048907 Bacteria 4827
219 Ga0496104_0128383 3300048907 Bacteria 2435
220 Ga0496105_0001069 3300048908 Bacteria 18953
221 Ga0496105_0081645 3300048908 Bacteria 2670
222 Ga0496106_0004262 3300048909 Bacteria 10644
223 Ga0496106_0024202 3300048909 Bacteria 4513
224 Ga0496107_0065052 3300048910 Bacteria 2643
225 Ga0496108_0002857 3300048911 Bacteria 13865
226 Ga0496108_0017668 3300048911 Bacteria 5837
227 Ga0496109_0079289 3300048912 Bacteria 3025
228 Ga0496109_0127215 3300048912 Bacteria 2376
229 Ga0496109_0165514 3300048912 Bacteria 2073
230 Ga0496110_0033711 3300048913 Bacteria 4432
231 Ga0496112_0005293 3300048915 Bacteria 11129
232 Ga0496112_0009413 3300048915 Bacteria 8800
233 Ga0496112_0032381 3300048915 Bacteria 5076
234 Ga0496113_0064725 3300048916 Bacteria 2765
235 Ga0496114_0001429 3300048917 Bacteria 18112
236 Ga0496115_0000616 3300048918 Bacteria 27043
237 Ga0496115_0110697 3300048918 Bacteria 2256
238 Ga0501031_0001547 3300049568 Bacteria 14333
239 Ga0501031_0055471 3300049568 Bacteria 2582
240 Ga0501036_0007078 3300049572 Bacteria 9125
241 Ga0501038_0001754 3300049574 Bacteria 20155
242 Ga0501039_0010956 3300049575 Bacteria 6909
243 Ga0501040_0022738 3300049576 Bacteria 4200
244 Ga0501040_0034775 3300049576 Bacteria 3414
245 Ga0501040_0042446 3300049576 Bacteria 3097
246 Ga0501042_0078365 3300049578 Bacteria 2366
247 Ga0501043_0003063 3300049579 Bacteria 13890
248 Ga0501048_0010021 3300049582 Bacteria 7092
249 Ga0501048_0052516 3300049582 Bacteria 2901
250 Ga0501072_0091537 3300049588 Bacteria 2414
251 Ga0501073_0003049 3300049589 Bacteria 12566
252 Ga0501074_0032855 3300049590 Bacteria 3759
253 Ga0501076_0036360 3300049592 Bacteria 3858
254 Ga0501076_0051703 3300049592 Bacteria 3253
255 Ga0501077_0008115 3300049593 Bacteria 6491
256 Ga0501077_0049526 3300049593 Bacteria 2670
257 Ga0501044_0122065 3300049823 Bacteria 2605
258 Ga0501045_0002085 3300049824 Bacteria 13516
259 nmdc:mga05p37_167034_c1 3300050507 Bacteria 2685
260 nmdc:mga05p37_234076_c1 3300050507 Bacteria 2212
261 nmdc:mga05p37_4040_c1 3300050507 Bacteria 17148
262 nmdc:mga05p37_44226_c1 3300050507 Bacteria 5479
263 nmdc:mga05p37_91189_c1 3300050507 Bacteria 3755
264 nmdc:mga09592_93967_c1 3300050508 Bacteria 2565
265 nmdc:mga06r32_88404_c1 3300050510 Bacteria 3024
266 nmdc:mga08y16_17849_c1 3300050511 Bacteria 7474
267 nmdc:mga0n895_249895_c1 3300050512 Bacteria 1800
268 nmdc:mga0n895_4301_c1 3300050512 Bacteria 11663
269 nmdc:mga0n895_8880_c1 3300050512 Bacteria 8752
270 nmdc:mga0rr50_5600_c1 3300050513 Bacteria 7515
271 nmdc:mga0rr50_66637_c1 3300050513 Bacteria 2733
272 nmdc:mga0rr50_75107_c1 3300050513 Bacteria 2590
273 nmdc:mga08x19_6993_c1 3300050514 Bacteria 6701
274 nmdc:mga0a205_105022_c1 3300050515 Bacteria 2724
275 nmdc:mga0a205_17379_c2 3300050515 Bacteria 4368
276 nmdc:mga0a205_63815_c1 3300050515 Bacteria 3558
277 Ga0495595_0006575 3300053084 Bacteria 4745
278 Ga0495619_0016463 3300053085 Bacteria 4681
279 Ga0501084_0019910 3300054114 Bacteria 5593
280 Ga0501084_0062155 3300054114 Bacteria 3126
281 Ga0590077_007472 3300059426 Bacteria 2236
282 Ga0466962_0004797 3300061719 Bacteria 6507
283 Ga0530510_0030641 3300061734 Bacteria 3865
284 Ga0530510_0036833 3300061734 Bacteria 3525
285 Ga0395899_0093430
286 JGI25407J50210_10000129
287 Ga0070680_100004050
288 Ga0070687_100002863
289 Ga0070703_10003526
290 Ga0070713_100006981
291 Ga0070713_100049144
292 Ga0070710_10000866
293 Ga0070701_10027880
294 Ga0070711_100067235
295 Ga0070705_100005117
296 Ga0070705_100111822
297 Ga0070694_100001414
298 Ga0070694_100032017
299 Ga0070708_100102614
300 Ga0070706_100006351
301 Ga0070706_100031542
302 Ga0070698_100001521
303 Ga0070684_100040666
304 Ga0070686_100071930
305 Ga0070704_100024906
306 Ga0070704_100125447
307 Ga0070702_100015246
308 Ga0081455_10003080
309 Ga0081455_10006277
310 Ga0081455_10043211
311 Ga0081455_10051940
312 Ga0081538_10000013
313 Ga0081538_10000063
314 Ga0081538_10000167
315 Ga0081538_10000603
316 Ga0081538_10000753
317 Ga0081538_10000785
318 Ga0081538_10000992
319 Ga0081538_10001046
320 Ga0081538_10001327
321 Ga0081538_10001929
322 Ga0081538_10002269
323 Ga0081538_10003343
324 Ga0081538_10008083
325 Ga0081538_10010181
326 Ga0081538_10012456
327 Ga0081538_10056346
328 Ga0081540_1027510
329 Ga0070717_10041095
330 Ga0075432_10035271
331 Ga0070716_100001815
332 Ga0070712_100010685
333 Ga0070712_100021570
334 Ga0070712_100050913
335 Ga0075428_100001400
336 Ga0075430_100026938
337 Ga0075431_100078678
338 Ga0075431_100083657
339 Ga0075431_100104189
340 Ga0075433_10008601
341 Ga0075433_10024232
342 Ga0075433_10044773
343 Ga0075433_10052502
344 Ga0075434_100001273
345 Ga0075434_100008008
346 Ga0075434_100027858
347 Ga0075434_100199326
348 Ga0075429_100038407
349 Ga0075436_100003446
350 Ga0075436_100140421
351 Ga0075435_100025076
352 Ga0075435_100223692
353 Ga0075435_100233061
354 Ga0099794_10000018
355 Ga0111539_10002177
356 Ga0111539_10018365
357 Ga0111539_10059268
358 Ga0111539_10252761
359 Ga0105245_10037243
360 Ga0114129_10004745
361 Ga0114129_10012078
362 Ga0114129_10027711
363 Ga0114129_10031541
364 Ga0114129_10039733
365 Ga0114129_10048756
366 Ga0114129_10104874
367 Ga0114129_10338995
368 Ga0105243_10093968
369 Ga0213876_10011683
370 Ga0213876_10023238
371 Ga0207653_10000220
372 Ga0207692_10006707
373 Ga0207693_10000758
374 Ga0207693_10088344
375 Ga0207663_10059741
376 Ga0207652_10132889
377 Ga0207700_10000001
378 Ga0207700_10082239
379 Ga0207700_10097566
380 Ga0207664_10013629
381 Ga0207664_10014733
382 Ga0207665_10003348
383 Ga0207708_10093593
384 Ga0207675_100091049
385 Ga0209588_1000214
386 Ga0209588_1000630
387 Ga0207428_10001543
388 Ga0207428_10006103
389 Ga0207428_10033927
390 Ga0207428_10103906
391 Ga0307408_100028237
392 Ga0307405_10014343
393 Ga0307405_10033842
394 Ga0307410_10023176
395 Ga0307412_10062991
396 Ga0307409_100009087
397 Ga0307409_100026357
398 Ga0307409_100066815
399 Ga0307416_100051385
400 Ga0307416_100112877
401 Ga0307415_100048240
402 Ga0373927_0011720
403 Ga0373933_0035860
404 Ga0373947_0013019
405 Ga0373937_0141083
406 Ga0395899_0009158
407 Ga0395899_0057730
408 Ga0395899_0063278
409 Ga0395899_0073511
410 Ga0395900_0028810
411 Ga0395900_0055994
412 Ga0395900_0061725
413 Ga0395900_0087904
414 Ga0395900_0093568
415 Ga0395900_0094240
416 Ga0395900_0105263
417 Ga0395900_0155965
418 Ga0395900_0183119
419 Ga0395900_0292878
420 Ga0395898_0000723
421 Ga0395898_0015538
422 Ga0395898_0019921
423 Ga0395898_0036227
424 Ga0395898_0039697
425 Ga0395898_0092084
426 Ga0395898_0100599
427 Ga0395905_0002012
428 Ga0395905_0002667
429 Ga0395905_0002836
430 Ga0395905_0006393
431 Ga0395905_0032331
432 Ga0395905_0101535
433 Ga0395905_0122733
434 Ga0395905_0147970
435 Ga0436364_0028511
436 Ga0436364_0044226
437 Ga0436364_0325851
438 Ga0436364_1379421
439 Ga0436364_1401109
440 Ga0395901_0006696
441 Ga0395901_0021929
442 Ga0395901_0045729
443 Ga0395901_0069165
444 Ga0395901_0094110
445 Ga0395901_0111703
446 Ga0436365_0114229
447 Ga0436365_0269938
448 Ga0436365_0439231
449 Ga0436365_0757770
450 Ga0436365_1100216
451 Ga0436365_1725271
452 Ga0436360_0977432
453 Ga0436363_0071414
454 Ga0436363_0330399
455 Ga0436363_0751996
456 Ga0436362_0587159
457 Ga0466961_0013895
458 Ga0466963_0009057
459 Ga0466963_0010223
460 Ga0466963_0054856
461 Ga0466963_0058353
462 Ga0466964_0035696
463 Ga0466970_0020579
464 Ga0466970_0033700
465 Ga0466957_0021164
466 Ga0466959_0010932
467 Ga0466959_0016590
468 Ga0466959_0051756
469 Ga0451576_0004818
470 Ga0451576_0013278
471 Ga0451576_0063671
472 Ga0466958_0000645
473 Ga0466958_0005749
474 Ga0466958_0045402
475 Ga0466958_0093984
476 Ga0466967_0005577
477 Ga0466967_0126276
478 Ga0466967_0205921
479 Ga0495651_0047365
480 Ga0495653_0010527
481 Ga0495608_0000984
482 Ga0495628_0030762
483 Ga0495628_0030935
484 Ga0495652_0042826
485 Ga0495587_0016810
486 Ga0495634_0034647
487 Ga0495659_0046466
488 Ga0495657_0000881
489 Ga0495599_0004832
490 Ga0495613_0040866
491 Ga0495600_0003983
492 Ga0495604_0001963
493 Ga0495674_0005784
494 Ga0495680_0007665
495 Ga0495680_0096092
496 Ga0495684_0022444
497 Ga0495684_0022949
498 Ga0495602_0028826
499 Ga0496100_0095150
500 Ga0496101_0013633
501 Ga0496104_0000278
502 Ga0496104_0032904
503 Ga0496104_0128383
504 Ga0496105_0001069
505 Ga0496105_0081645
506 Ga0496106_0004262
507 Ga0496106_0024202
508 Ga0496107_0065052
509 Ga0496108_0002857
510 Ga0496108_0017668
511 Ga0496109_0079289
512 Ga0496109_0127215
513 Ga0496109_0165514
514 Ga0496110_0033711
515 Ga0496112_0005293
516 Ga0496112_0009413
517 Ga0496112_0032381
518 Ga0496113_0064725
519 Ga0496114_0001429
520 Ga0496115_0000616
521 Ga0496115_0110697
522 Ga0501031_0001547
523 Ga0501031_0055471
524 Ga0501036_0007078
525 Ga0501038_0001754
526 Ga0501039_0010956
527 Ga0501040_0022738
528 Ga0501040_0034775
529 Ga0501040_0042446
530 Ga0501042_0078365
531 Ga0501043_0003063
532 Ga0501048_0010021
533 Ga0501048_0052516
534 Ga0501072_0091537
535 Ga0501073_0003049
536 Ga0501074_0032855
537 Ga0501076_0036360
538 Ga0501076_0051703
539 Ga0501077_0008115
540 Ga0501077_0049526
541 Ga0501044_0122065
542 Ga0501045_0002085
543 nmdc:mga05p37_167034_c1
544 nmdc:mga05p37_234076_c1
545 nmdc:mga05p37_4040_c1
546 nmdc:mga05p37_44226_c1
547 nmdc:mga05p37_91189_c1
548 nmdc:mga09592_93967_c1
549 nmdc:mga06r32_88404_c1
550 nmdc:mga08y16_17849_c1
551 nmdc:mga0n895_249895_c1
552 nmdc:mga0n895_4301_c1
553 nmdc:mga0n895_8880_c1
554 nmdc:mga0rr50_5600_c1
555 nmdc:mga0rr50_66637_c1
556 nmdc:mga0rr50_75107_c1
557 nmdc:mga08x19_6993_c1
558 nmdc:mga0a205_105022_c1
559 nmdc:mga0a205_17379_c2
560 nmdc:mga0a205_63815_c1
561 Ga0495595_0006575
562 Ga0495619_0016463
563 Ga0501084_0019910
564 Ga0501084_0062155
565 Ga0590077_007472
566 Ga0466962_0004797
567 Ga0530510_0030641
568 Ga0530510_0036833

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04675

DNA_ligase_A_N

DNA ligase N terminus

154

234

0.94

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

464

556

0.93

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

260

445

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6q1v-assembly1.cif.gz_A human dna ligase 1 (e592r) bound to an adenylated, hydroxyl terminated dna nick 0.8573 2 498
6p0d-assembly1.cif.gz_A human dna ligase 1 (e346a/e592a) bound to an adenylated, hydroxyl terminated dna nick 0.8533 2 498
6p0a-assembly1.cif.gz_A human dna ligase 1 bound to an adenylated, dideoxy terminated dna nick with 2 mm mg2+ 0.8519 2 498
7l35-assembly1.cif.gz_A human dna ligase 1 - r771w nicked dna complex 0.8488 2 498
7l34-assembly1.cif.gz_A human dna ligase 1 - r641l nicked dna complex 0.8469 2 498
ID Description Score Start End Superfamily
af_P9WNV5_381_507_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9825 374 498 2.40.50.140
3rr5A03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9608 376 498 2.40.50.140
af_P9WNV5_381_507_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9596 374 498 2.40.50.140
af_Q57635_441_573_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9504 374 498 2.40.50.140
af_P9WNV5_183_380_3.30.470.30 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.9452 185 373 3.30.470.30
ID Description Score Start End GO Terms
AF-A0A3L6JCR4-F1-model_v4 DNA ligase ATP-dependent C-terminal domain-containing protein 0.9795 404 497 GO:0003910
GO:0006266
GO:0006273
GO:0006281
GO:0006310
AF-A0A831Z632-F1-model_v4 DNA ligase ATP-dependent C-terminal domain-containing protein 0.9785 386 498 GO:0003910
GO:0006266
GO:0006273
GO:0006281
GO:0006310
AF-A0A7C2BEX7-F1-model_v4 DNA ligase ATP-dependent C-terminal domain-containing protein 0.9766 395 499 GO:0003910
GO:0006266
GO:0006273
GO:0006281
GO:0006310
AF-A0A2V2QND2-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.9763 337 498 GO:0003910
GO:0005524
GO:0006266
GO:0006281
GO:0006310
AF-A0A7K2BUH2-F1-model_v4 ATP-dependent DNA ligase 0.976 3 171 GO:0003677
GO:0003910
GO:0005524
GO:0006281
GO:0006310

Map