F386036

General Info

Members Datasets Scaffolds Average Seq Length
284 209 278 585

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100085813|Ga0070714_1000858131
Length 639
Sequence VNGWLLRWLSWITPERALTRSGEPVIGTMAMTPEPRGKLDATMVVNGPEGGLPGWDAVGWRAAEDSVRRLRQRIFTASQAGDLKRVRNLQKLMLRSRANALVSVRRVTGLNAGRKTAGIDGQVALTPQARADLADWVQRSSKPWAARPVKRVYIPKRGTTGKRRPLGIPVIADRALQALAANALEPEWEARFEPRSYGFRPGRGCHDAIEAIYQVSKGASPHRRWALDADLAAAFDRIDHTFLLSQLGTFPARELIAGWLKAGVVEDGRFTPTEEGTPQGGVVSPALLNVVLHGMETAAGARYQRSGSNAAFAVPGSPVLVRYADDLVALCHSRHEAEQVKARLAAWLAPRGLAFNEDKTRIVTLDEGFDFLGFNVRRYRGKLLIKPSKAAVRRIRERLRVEIRSLRGANAQAVIARLNPIVRGWSAYYRTAVSSEIFVALDHYLWKLTYKWAKHSHPNKPTRWIVRRYFGTFNKSRQDRWVFGDRDSGAYLHRFAWAKIVRHQMVRGTSSPDDPALAEYWAARRRRGIPRPIDAATLRLLQSQNGRCPGCGQLLLDAGRPPQTPREWEQWLAATRKAITKNAIATAAGSTPDEGRLRLLHAHCNRRSAGNRKAQHLLPATSPRGLPEPRRGETRMSGS

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
4 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
5 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
102 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
121 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
122 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
123 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
124 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
138 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
139 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
140 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
146 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
152 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
153 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
159 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
160 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
161 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
162 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
165 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
190 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
191 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
192 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
193 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
194 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
195 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
196 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
197 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
198 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
203 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
204 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
205 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
206 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 0
Isolates 2.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.7
Nodule 0.35
Rhizoplane 2.82
Rhizosphere 91.2
Stem 0
Stem Tuber 0
Unclassified 4.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000222 3300003373 Bacteria 9819
2 Ga0070658_10033201 3300005327 Bacteria 4151
3 Ga0070683_100043197 3300005329 Bacteria 4154
4 Ga0070683_100100337 3300005329 Bacteria 2725
5 Ga0068869_100076537 3300005334 Bacteria 2487
6 Ga0070680_100065238 3300005336 Bacteria 2983
7 Ga0070660_100065545 3300005339 Bacteria 2827
8 Ga0070660_100067602 3300005339 Bacteria 2784
9 Ga0070661_100031345 3300005344 Bacteria 3844
10 Ga0070692_10023936 3300005345 Bacteria 2997
11 Ga0070674_100071298 3300005356 Bacteria 2457
12 Ga0070703_10009065 3300005406 Bacteria 2807
13 Ga0070714_100085813 3300005435 Bacteria 2750
14 Ga0070713_100097377 3300005436 Bacteria 2542
15 Ga0070713_100149924 3300005436 Bacteria 2073
16 Ga0070710_10023548 3300005437 Bacteria 3238
17 Ga0070700_100069546 3300005441 Bacteria 2242
18 Ga0070708_100078131 3300005445 Bacteria 2991
19 Ga0070663_100076470 3300005455 Bacteria 2448
20 Ga0070663_100079787 3300005455 Bacteria 2402
21 Ga0070681_10103729 3300005458 Bacteria 2787
22 Ga0068867_100070055 3300005459 Bacteria 2621
23 Ga0070685_10059199 3300005466 Bacteria 2236
24 Ga0070706_100035525 3300005467 Bacteria 4602
25 Ga0070706_100079425 3300005467 Bacteria 3036
26 Ga0070706_100094675 3300005467 Bacteria 2771
27 Ga0070706_100096580 3300005467 Bacteria 2743
28 Ga0070707_100010111 3300005468 Bacteria 8781
29 Ga0070698_100001189 3300005471 Bacteria 28864
30 Ga0070698_100057887 3300005471 Bacteria 3920
31 Ga0070698_100081440 3300005471 Bacteria 3231
32 Ga0070679_100091021 3300005530 Bacteria 3038
33 Ga0070684_100020518 3300005535 Bacteria 5481
34 Ga0070684_100090957 3300005535 Bacteria 2714
35 Ga0070697_100026306 3300005536 Bacteria 4646
36 Ga0070665_100093708 3300005548 Bacteria 3008
37 Ga0070702_100011876 3300005615 Bacteria 4344
38 Ga0068852_100112505 3300005616 Bacteria 2477
39 Ga0068864_100079196 3300005618 Bacteria 2876
40 Ga0068861_100076316 3300005719 Bacteria 2611
41 Ga0068863_100033859 3300005841 Bacteria 4867
42 Ga0081455_10012653 3300005937 Bacteria 8401
43 Ga0081538_10000346 3300005981 Bacteria 52797
44 Ga0081538_10049277 3300005981 Bacteria 2556
45 Ga0081539_10022117 3300005985 Bacteria 4218
46 Ga0081539_10039698 3300005985 Bacteria 2774
47 Ga0070717_10038235 3300006028 Bacteria 3900
48 Ga0070717_10083854 3300006028 Bacteria 2681
49 Ga0070712_100068584 3300006175 Bacteria 2527
50 Ga0111539_10205517 3300009094 Bacteria 2296
51 Ga0105245_10081495 3300009098 Bacteria 2959
52 Ga0105245_10181808 3300009098 Bacteria 2009
53 Ga0105247_10042325 3300009101 Bacteria 2790
54 Ga0105243_10049099 3300009148 Bacteria 3328
55 Ga0105241_10086403 3300009174 Bacteria 2467
56 Ga0105248_10098575 3300009177 Bacteria 3293
57 Ga0105237_10083713 3300009545 Bacteria 3181
58 Ga0105237_10100558 3300009545 Bacteria 2883
59 Ga0105238_10080491 3300009551 Bacteria 3247
60 Ga0157371_10019120 3300013102 Bacteria 5058
61 Ga0157370_10015418 3300013104 Bacteria 7767
62 Ga0157370_10075308 3300013104 Bacteria 3182
63 Ga0157369_10070308 3300013105 Bacteria 3761
64 Ga0157369_10141764 3300013105 Bacteria 2543
65 Ga0157372_10137904 3300013307 Bacteria 2810
66 Ga0157379_10054188 3300014968 Bacteria 3584
67 Ga0157379_10097123 3300014968 Bacteria 2644
68 Ga0157376_10128035 3300014969 Bacteria 2261
69 Ga0163161_10041002 3300017792 Bacteria 3326
70 Ga0213873_10004440 3300021358 Bacteria 2616
71 Ga0213874_10006968 3300021377 Bacteria 2695
72 Ga0213876_10020788 3300021384 Bacteria 3470
73 Ga0213876_10037613 3300021384 Bacteria 2553
74 Ga0207692_10000142 3300025898 Bacteria 22149
75 Ga0207710_10028503 3300025900 Bacteria 2424
76 Ga0207688_10026315 3300025901 Bacteria 3198
77 Ga0207684_10022680 3300025910 Bacteria 5360
78 Ga0207684_10063577 3300025910 Bacteria 3133
79 Ga0207684_10069831 3300025910 Bacteria 2985
80 Ga0207684_10076415 3300025910 Bacteria 2846
81 Ga0207707_10081828 3300025912 Bacteria 2819
82 Ga0207693_10011684 3300025915 Bacteria 7103
83 Ga0207693_10075405 3300025915 Bacteria 2641
84 Ga0207660_10058296 3300025917 Bacteria 2768
85 Ga0207662_10031342 3300025918 Bacteria 3089
86 Ga0207657_10064123 3300025919 Bacteria 3138
87 Ga0207649_10049234 3300025920 Bacteria 2601
88 Ga0207652_10089522 3300025921 Bacteria 2702
89 Ga0207646_10013653 3300025922 Bacteria 7757
90 Ga0207646_10087334 3300025922 Bacteria 2791
91 Ga0207687_10066851 3300025927 Bacteria 2556
92 Ga0207687_10117866 3300025927 Bacteria 1981
93 Ga0207664_10060652 3300025929 Bacteria 3015
94 Ga0207664_10073424 3300025929 Bacteria 2760
95 Ga0207709_10028735 3300025935 Bacteria 3217
96 Ga0207669_10039437 3300025937 Bacteria 2729
97 Ga0207665_10072530 3300025939 Bacteria 2352
98 Ga0207711_10169531 3300025941 Bacteria 1980
99 Ga0207661_10010364 3300025944 Bacteria 6707
100 Ga0207661_10169720 3300025944 Bacteria 1899
101 Ga0207678_10106817 3300026067 Bacteria 2388
102 Ga0207708_10089804 3300026075 Bacteria 2368
103 Ga0207648_10073792 3300026089 Bacteria 2973
104 Ga0207675_100101658 3300026118 Bacteria 2708
105 Ga0207683_10007050 3300026121 Bacteria 9636
106 Ga0207683_10104246 3300026121 Bacteria 2534
107 Ga0207698_10078390 3300026142 Bacteria 2652
108 Ga0207428_10100418 3300027907 Bacteria 2236
109 Ga0268265_10070241 3300028380 Bacteria 2723
110 Ga0307515_10174241 3300028794 Bacteria 2128
111 Ga0307513_10000175 3300031456 Bacteria 92151
112 Ga0307513_10064877 3300031456 Bacteria 3844
113 Ga0307408_100045174 3300031548 Bacteria 3144
114 Ga0316579_10021740 3300031691 Bacteria 2862
115 Ga0265314_10058906 3300031711 Bacteria 2630
116 Ga0307516_10104844 3300031730 Bacteria 2639
117 Ga0307410_10053038 3300031852 Bacteria 2742
118 Ga0307406_10019320 3300031901 Bacteria 3997
119 Ga0307406_10078896 3300031901 Bacteria 2182
120 Ga0307407_10038443 3300031903 Bacteria 2652
121 Ga0307409_100083932 3300031995 Bacteria 2584
122 Ga0307409_100108630 3300031995 Bacteria 2320
123 Ga0307416_100082373 3300032002 Bacteria 2725
124 Ga0307416_100085600 3300032002 Bacteria 2683
125 Ga0307414_10114894 3300032004 Bacteria 2057
126 Ga0307415_100056123 3300032126 Bacteria 2698
127 Ga0307507_10079390 3300033179 Bacteria 2900
128 Ga0373934_0010672 3300035086 Bacteria 3449
129 Ga0373951_0000031 3300035091 Bacteria 55817
130 Ga0373923_0012940 3300035111 Bacteria 3098
131 Ga0373936_0018772 3300035113 Bacteria 2673
132 Ga0373953_0013462 3300035117 Bacteria 2923
133 Ga0373953_0017007 3300035117 Bacteria 2665
134 Ga0373954_0018734 3300035118 Bacteria 3118
135 Ga0373954_0030712 3300035118 Bacteria 2478
136 Ga0373956_0015461 3300035119 Bacteria 3195
137 Ga0373957_0009142 3300035120 Bacteria 3233
138 Ga0373955_0017713 3300035172 Bacteria 3529
139 Ga0373924_0003971 3300035410 Bacteria 5133
140 Ga0373931_0080726 3300035691 Unclassified 1794
141 Ga0373935_0036229 3300035692 Bacteria 3083
142 Ga0373933_0041330 3300035724 Bacteria 2721
143 Ga0373933_0047361 3300035724 Bacteria 2556
144 Ga0373947_0075073 3300035725 Bacteria 2081
145 Ga0373937_0061725 3300036401 Bacteria 3445
146 Ga0373937_0075122 3300036401 Bacteria 3119
147 Ga0373925_0060708 3300037068 Bacteria 2839
148 Ga0373925_0074823 3300037068 Bacteria 2565
149 Ga0395898_0050113 3300037466 Bacteria 4088
150 Ga0395898_0081822 3300037466 Bacteria 3113
151 Ga0436364_0578341 3300037853 Bacteria 7874
152 Ga0395901_0040881 3300038443 Bacteria 4803
153 Ga0395901_0175439 3300038443 Bacteria 2248
154 Ga0436365_0330110 3300039437 Bacteria 3025
155 Ga0436365_1154087 3300039437 Bacteria 5866
156 Ga0436365_1901150 3300039437 Bacteria 4137
157 Ga0436363_1635154 3300039450 Bacteria 3655
158 Ga0436362_0621932 3300039453 Bacteria 2633
159 Ga0436362_0910875 3300039453 Bacteria 2717
160 Ga0439449_0011210 3300042007 Bacteria 3375
161 Ga0439450_004958 3300042008 Bacteria 2310
162 Ga0439463_011006 3300042016 Bacteria 2222
163 Ga0495592_0066950 3300046454 Bacteria 2626
164 Ga0495592_0117990 3300046454 Bacteria 1870
165 Ga0495629_0060826 3300046459 Bacteria 2639
166 Ga0495641_0041237 3300046461 Bacteria 2145
167 Ga0495651_0032615 3300046462 Bacteria 4061
168 Ga0495651_0056088 3300046462 Bacteria 3026
169 Ga0495653_0012417 3300046463 Bacteria 6954
170 Ga0495653_0069810 3300046463 Bacteria 2630
171 Ga0495653_0070372 3300046463 Bacteria 2618
172 Ga0495662_0029475 3300046476 Bacteria 2650
173 Ga0495664_0029323 3300046477 Bacteria 3217
174 Ga0495664_0046474 3300046477 Bacteria 2575
175 Ga0495585_0028545 3300046492 Bacteria 3182
176 Ga0495608_0059271 3300046511 Bacteria 2522
177 Ga0495608_0060836 3300046511 Bacteria 2485
178 Ga0495608_0089163 3300046511 Bacteria 1996
179 Ga0495618_0016835 3300046514 Bacteria 4477
180 Ga0495618_0046624 3300046514 Bacteria 2735
181 Ga0495628_0074833 3300046516 Bacteria 2637
182 Ga0495628_0083616 3300046516 Bacteria 2478
183 Ga0495630_0059759 3300046517 Bacteria 2860
184 Ga0495631_0026417 3300046518 Bacteria 2667
185 Ga0495637_0024684 3300046520 Bacteria 2719
186 Ga0495644_0016559 3300046523 Bacteria 2821
187 Ga0495663_0008314 3300046525 Bacteria 2874
188 Ga0495652_0060941 3300046529 Bacteria 3186
189 Ga0495652_0077564 3300046529 Bacteria 2753
190 Ga0495652_0080697 3300046529 Bacteria 2686
191 Ga0495665_0027679 3300046531 Bacteria 3041
192 Ga0495640_0052497 3300046533 Bacteria 2799
193 Ga0495640_0070794 3300046533 Bacteria 2342
194 Ga0495586_0037853 3300046535 Bacteria 2589
195 Ga0495587_0037932 3300046536 Bacteria 2891
196 Ga0495587_0043165 3300046536 Bacteria 2686
197 Ga0495598_0005980 3300046537 Bacteria 2724
198 Ga0495645_0047696 3300046543 Bacteria 3120
199 Ga0495667_0035307 3300046559 Bacteria 3341
200 Ga0495667_0039343 3300046559 Bacteria 3144
201 Ga0495634_0031172 3300046642 Bacteria 3673
202 Ga0495634_0033373 3300046642 Bacteria 3537
203 Ga0495635_0029982 3300046663 Bacteria 3781
204 Ga0495659_0016021 3300046664 Bacteria 2468
205 Ga0495657_0042032 3300046675 Bacteria 3123
206 Ga0495657_0051019 3300046675 Bacteria 2779
207 Ga0495657_0058244 3300046675 Bacteria 2566
208 Ga0495599_0023980 3300046678 Bacteria 3815
209 Ga0495599_0027467 3300046678 Bacteria 3568
210 Ga0495599_0061270 3300046678 Bacteria 2351
211 Ga0495623_0032213 3300046679 Bacteria 3369
212 Ga0495646_0034662 3300046680 Bacteria 3134
213 Ga0495646_0054883 3300046680 Bacteria 2395
214 Ga0495613_0061190 3300046689 Bacteria 2757
215 Ga0495613_0063420 3300046689 Bacteria 2704
216 Ga0495613_0069311 3300046689 Bacteria 2571
217 Ga0495624_0050707 3300046690 Bacteria 2628
218 Ga0495670_0020389 3300046691 Bacteria 3269
219 Ga0495600_0055987 3300046809 Bacteria 2575
220 Ga0495600_0097440 3300046809 Bacteria 1917
221 Ga0495604_0041198 3300047317 Bacteria 3622
222 Ga0495636_0026328 3300047318 Bacteria 2366
223 Ga0495674_0073003 3300047319 Bacteria 2958
224 Ga0495674_0114619 3300047319 Bacteria 2282
225 Ga0495680_0034640 3300047322 Bacteria 4073
226 Ga0495680_0063898 3300047322 Bacteria 2825
227 Ga0495680_0131400 3300047322 Bacteria 1839
228 Ga0495687_021104 3300047443 Bacteria 3161
229 Ga0495687_026132 3300047443 Bacteria 2752
230 Ga0495675_0031127 3300047444 Bacteria 3406
231 Ga0495675_0052765 3300047444 Bacteria 2581
232 Ga0495684_0038565 3300047471 Bacteria 3662
233 Ga0495684_0056369 3300047471 Bacteria 2996
234 Ga0495684_0076033 3300047471 Bacteria 2550
235 Ga0495602_0065957 3300048088 Bacteria 3121
236 Ga0495602_0070648 3300048088 Bacteria 2986
237 Ga0496100_0121362 3300048903 Bacteria 1829
238 Ga0496102_0027189 3300048905 Bacteria 5109
239 Ga0496104_0137008 3300048907 Bacteria 2352
240 Ga0496108_0085937 3300048911 Bacteria 2670
241 Ga0496110_0212349 3300048913 Bacteria 1759
242 Ga0496111_0066054 3300048914 Bacteria 2626
243 Ga0496112_0113582 3300048915 Bacteria 2679
244 Ga0496114_0015468 3300048917 Bacteria 6134
245 Ga0501031_0033712 3300049568 Bacteria 3341
246 Ga0501032_0019780 3300049569 Bacteria 4702
247 Ga0501033_0039848 3300049570 Bacteria 3508
248 Ga0501036_0036912 3300049572 Bacteria 4134
249 Ga0501037_0026959 3300049573 Bacteria 4245
250 Ga0501038_0007259 3300049574 Bacteria 10231
251 Ga0501039_0026122 3300049575 Bacteria 4487
252 Ga0501040_0014535 3300049576 Bacteria 5189
253 Ga0501040_0038721 3300049576 Bacteria 3241
254 Ga0501041_0010045 3300049577 Bacteria 5576
255 Ga0501042_0002882 3300049578 Bacteria 10673
256 Ga0501043_0026665 3300049579 Bacteria 4533
257 Ga0501046_0070353 3300049580 Bacteria 2720
258 Ga0501048_0033028 3300049582 Bacteria 3739
259 Ga0501068_0040589 3300049584 Bacteria 2794
260 Ga0501070_0074513 3300049586 Bacteria 2810
261 Ga0501071_0019325 3300049587 Bacteria 4727
262 Ga0501072_0045218 3300049588 Bacteria 3461
263 Ga0501074_0018116 3300049590 Bacteria 5115
264 Ga0501076_0025170 3300049592 Bacteria 4604
265 Ga0501077_0025763 3300049593 Bacteria 3732
266 Ga0501079_0065519 3300049741 Bacteria 2803
267 Ga0501080_0045527 3300049742 Bacteria 4084
268 Ga0501083_0036421 3300049744 Bacteria 3356
269 Ga0501035_0058411 3300049822 Bacteria 3437
270 Ga0501045_0021041 3300049824 Bacteria 4663
271 nmdc:mga08y16_79726_c1 3300050511 Bacteria 3413
272 nmdc:mga0n895_202986_c1 3300050512 Bacteria 2013
273 Ga0495601_0046281 3300053077 Bacteria 2738
274 Ga0495612_0019873 3300053078 Bacteria 2691
275 Ga0500644_0004394 3300053088 Bacteria 3526
276 Ga0500658_0009201 3300053134 Bacteria 3644
277 Ga0501084_0059624 3300054114 Bacteria 3194
278 Ga0501082_0029196 3300060353 Bacteria 4750

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8048127548 8048129915 471
2 3300048913 Ga0496110_0212349 Ga0496110_0212349_69_1571 486
3 3300005471 Ga0070698_100001189 Ga0070698_10000118934 490
4 3300005615 Ga0070702_100011876 Ga0070702_1000118761 492
5 3300046809 Ga0495600_0097440 Ga0495600_0097440_58_1662 501
6 3300037466 Ga0395898_0050113 Ga0395898_0050113_12_1628 505
7 3300005536 Ga0070697_100026306 Ga0070697_1000263063 510
8 3300046454 Ga0495592_0117990 Ga0495592_0117990_164_1801 511
9 3300046463 Ga0495653_0012417 Ga0495653_0012417_5100_6692 515
10 3300046529 Ga0495652_0077564 Ga0495652_0077564_291_1883 515
11 3300046675 Ga0495657_0058244 Ga0495657_0058244_786_2378 515
12 3300046678 Ga0495599_0027467 Ga0495599_0027467_169_1761 515
13 3300031901 Ga0307406_10078896 Ga0307406_100788961 516
14 3300042008 Ga0439450_004958 Ga0439450_004958_576_2189 524
15 3300048903 Ga0496100_0121362 Ga0496100_0121362_199_1815 524
16 3300035691 Ga0373931_0080726 Ga0373931_0080726_121_1737 525
17 3300047443 Ga0495687_021104 Ga0495687_021104_1451_3058 525
18 3300031548 Ga0307408_100045174 Ga0307408_1000451742 528
19 3300031901 Ga0307406_10019320 Ga0307406_100193202 528
20 3300031995 Ga0307409_100083932 Ga0307409_1000839322 528
21 3300032002 Ga0307416_100082373 Ga0307416_1000823732 528
22 3300049578 Ga0501042_0002882 Ga0501042_0002882_8248_9882 535
23 3300005437 Ga0070710_10023548 Ga0070710_100235482 551
24 iso_pu_bacteria 2899359706 2899361394 552
25 3300025898 Ga0207692_10000142 Ga0207692_100001422 555
26 3300037853 Ga0436364_0578341 Ga0436364_0578341_5065_6873 556
27 3300038443 Ga0395901_0040881 Ga0395901_0040881_1023_2798 556
28 3300046689 Ga0495613_0069311 Ga0495613_0069311_201_1937 557
29 3300005985 Ga0081539_10022117 Ga0081539_100221171 560
30 3300049586 Ga0501070_0074513 Ga0501070_0074513_1018_2748 561
31 iso_pu_bacteria 2751185782 2753272848 561
32 3300037466 Ga0395898_0081822 Ga0395898_0081822_1089_2804 563
33 3300035086 Ga0373934_0010672 Ga0373934_0010672_480_2213 564
34 3300035111 Ga0373923_0012940 Ga0373923_0012940_1074_2807 564
35 3300035113 Ga0373936_0018772 Ga0373936_0018772_832_2565 564
36 3300035117 Ga0373953_0017007 Ga0373953_0017007_225_1958 564
37 3300035118 Ga0373954_0018734 Ga0373954_0018734_221_1954 564
38 3300035119 Ga0373956_0015461 Ga0373956_0015461_1004_2737 564
39 3300035120 Ga0373957_0009142 Ga0373957_0009142_552_2285 564
40 3300035172 Ga0373955_0017713 Ga0373955_0017713_526_2259 564
41 3300035410 Ga0373924_0003971 Ga0373924_0003971_2602_4335 564
42 3300035692 Ga0373935_0036229 Ga0373935_0036229_547_2280 564
43 3300035724 Ga0373933_0041330 Ga0373933_0041330_283_2016 564
44 3300036401 Ga0373937_0075122 Ga0373937_0075122_550_2283 564
45 3300046454 Ga0495592_0066950 Ga0495592_0066950_81_1814 564
46 3300046459 Ga0495629_0060826 Ga0495629_0060826_880_2613 564
47 3300046462 Ga0495651_0032615 Ga0495651_0032615_917_2650 564
48 3300046463 Ga0495653_0070372 Ga0495653_0070372_100_1833 564
49 3300046476 Ga0495662_0029475 Ga0495662_0029475_830_2563 564
50 3300046477 Ga0495664_0046474 Ga0495664_0046474_753_2486 564
51 3300046511 Ga0495608_0059271 Ga0495608_0059271_84_1817 564
52 3300046514 Ga0495618_0016835 Ga0495618_0016835_881_2614 564
53 3300046516 Ga0495628_0074833 Ga0495628_0074833_795_2528 564
54 3300046517 Ga0495630_0059759 Ga0495630_0059759_810_2543 564
55 3300046529 Ga0495652_0060941 Ga0495652_0060941_494_2227 564
56 3300046531 Ga0495665_0027679 Ga0495665_0027679_103_1836 564
57 3300046533 Ga0495640_0052497 Ga0495640_0052497_70_1803 564
58 3300046535 Ga0495586_0037853 Ga0495586_0037853_119_1852 564
59 3300046536 Ga0495587_0043165 Ga0495587_0043165_133_1866 564
60 3300046543 Ga0495645_0047696 Ga0495645_0047696_1148_2881 564
61 3300046559 Ga0495667_0039343 Ga0495667_0039343_824_2557 564
62 3300046642 Ga0495634_0031172 Ga0495634_0031172_280_2013 564
63 3300046642 Ga0495634_0033373 Ga0495634_0033373_1223_2974 564
64 3300046663 Ga0495635_0029982 Ga0495635_0029982_1544_3277 564
65 3300046675 Ga0495657_0051019 Ga0495657_0051019_917_2650 564
66 3300046678 Ga0495599_0023980 Ga0495599_0023980_1213_2946 564
67 3300046679 Ga0495623_0032213 Ga0495623_0032213_95_1828 564
68 3300046680 Ga0495646_0034662 Ga0495646_0034662_1190_2923 564
69 3300046689 Ga0495613_0061190 Ga0495613_0061190_11_1744 564
70 3300046690 Ga0495624_0050707 Ga0495624_0050707_808_2541 564
71 3300046809 Ga0495600_0055987 Ga0495600_0055987_762_2495 564
72 3300047317 Ga0495604_0041198 Ga0495604_0041198_1531_3264 564
73 3300047319 Ga0495674_0073003 Ga0495674_0073003_430_2163 564
74 3300047322 Ga0495680_0034640 Ga0495680_0034640_1426_3159 564
75 3300047444 Ga0495675_0031127 Ga0495675_0031127_66_1799 564
76 3300047471 Ga0495684_0038565 Ga0495684_0038565_1842_3575 564
77 3300048088 Ga0495602_0065957 Ga0495602_0065957_1253_2986 564
78 3300053077 Ga0495601_0046281 Ga0495601_0046281_831_2564 564
79 3300053078 Ga0495612_0019873 Ga0495612_0019873_837_2570 564
80 iso_pu_bacteria 8048127548 8048129229 565
81 3300035117 Ga0373953_0013462 Ga0373953_0013462_488_2296 566
82 3300035724 Ga0373933_0047361 Ga0373933_0047361_55_1863 566
83 3300036401 Ga0373937_0061725 Ga0373937_0061725_306_2114 566
84 3300046462 Ga0495651_0056088 Ga0495651_0056088_514_2322 566
85 3300046463 Ga0495653_0069810 Ga0495653_0069810_103_1911 566
86 3300046477 Ga0495664_0029323 Ga0495664_0029323_1333_3141 566
87 3300046511 Ga0495608_0089163 Ga0495608_0089163_55_1863 566
88 3300046514 Ga0495618_0046624 Ga0495618_0046624_886_2694 566
89 3300046516 Ga0495628_0083616 Ga0495628_0083616_99_1907 566
90 3300046529 Ga0495652_0080697 Ga0495652_0080697_199_2007 566
91 3300046533 Ga0495640_0070794 Ga0495640_0070794_473_2281 566
92 3300046536 Ga0495587_0037932 Ga0495587_0037932_944_2752 566
93 3300046559 Ga0495667_0035307 Ga0495667_0035307_203_2011 566
94 3300046675 Ga0495657_0042032 Ga0495657_0042032_649_2457 566
95 3300046678 Ga0495599_0061270 Ga0495599_0061270_62_1870 566
96 3300046680 Ga0495646_0054883 Ga0495646_0054883_546_2354 566
97 3300047322 Ga0495680_0063898 Ga0495680_0063898_134_1942 566
98 3300047444 Ga0495675_0052765 Ga0495675_0052765_85_1893 566
99 3300047471 Ga0495684_0076033 Ga0495684_0076033_701_2509 566
100 3300048088 Ga0495602_0070648 Ga0495602_0070648_90_1898 566
101 3300049568 Ga0501031_0033712 Ga0501031_0033712_706_2475 566
102 3300049569 Ga0501032_0019780 Ga0501032_0019780_744_2513 566
103 3300049570 Ga0501033_0039848 Ga0501033_0039848_1010_2779 566
104 3300049572 Ga0501036_0036912 Ga0501036_0036912_961_2730 566
105 3300049573 Ga0501037_0026959 Ga0501037_0026959_1499_3268 566
106 3300049574 Ga0501038_0007259 Ga0501038_0007259_7747_9516 566
107 3300049575 Ga0501039_0026122 Ga0501039_0026122_1330_3099 566
108 3300049576 Ga0501040_0014535 Ga0501040_0014535_1897_3666 566
109 3300049577 Ga0501041_0010045 Ga0501041_0010045_1617_3386 566
110 3300049579 Ga0501043_0026665 Ga0501043_0026665_1607_3376 566
111 3300049580 Ga0501046_0070353 Ga0501046_0070353_818_2587 566
112 3300049582 Ga0501048_0033028 Ga0501048_0033028_1269_3038 566
113 3300049584 Ga0501068_0040589 Ga0501068_0040589_936_2705 566
114 3300049587 Ga0501071_0019325 Ga0501071_0019325_2854_4623 566
115 3300049588 Ga0501072_0045218 Ga0501072_0045218_296_2065 566
116 3300049592 Ga0501076_0025170 Ga0501076_0025170_1737_3506 566
117 3300049593 Ga0501077_0025763 Ga0501077_0025763_976_2745 566
118 3300049741 Ga0501079_0065519 Ga0501079_0065519_879_2648 566
119 3300049742 Ga0501080_0045527 Ga0501080_0045527_1095_2864 566
120 3300049744 Ga0501083_0036421 Ga0501083_0036421_1043_2812 566
121 3300049822 Ga0501035_0058411 Ga0501035_0058411_976_2745 566
122 3300049824 Ga0501045_0021041 Ga0501045_0021041_1405_3174 566
123 3300054114 Ga0501084_0059624 Ga0501084_0059624_1308_3077 566
124 3300026089 Ga0207648_10073792 Ga0207648_100737921 567
125 3300005471 Ga0070698_100081440 Ga0070698_1000814402 569
126 3300006028 Ga0070717_10038235 Ga0070717_100382352 569
127 3300021358 Ga0213873_10004440 Ga0213873_100044401 569
128 3300021384 Ga0213876_10020788 Ga0213876_100207882 569
129 3300039437 Ga0436365_0330110 Ga0436365_0330110_910_2655 569
130 3300039453 Ga0436362_0621932 Ga0436362_0621932_814_2559 569
131 3300047322 Ga0495680_0131400 Ga0495680_0131400_21_1760 569
132 iso_pu_bacteria 2622736626 2623590157 570
133 3300005329 Ga0070683_100100337 Ga0070683_1001003371 571
134 3300021384 Ga0213876_10037613 Ga0213876_100376131 572
135 3300039437 Ga0436365_1901150 Ga0436365_1901150_891_2693 572
136 3300050512 nmdc:mga0n895_202986_c1 nmdc:mga0n895_202986_c1_185_1948 572
137 3300005334 Ga0068869_100076537 Ga0068869_1000765371 573
138 3300005339 Ga0070660_100067602 Ga0070660_1000676022 573
139 3300005356 Ga0070674_100071298 Ga0070674_1000712981 573
140 3300005455 Ga0070663_100079787 Ga0070663_1000797872 573
141 3300005459 Ga0068867_100070055 Ga0068867_1000700551 573
142 3300005466 Ga0070685_10059199 Ga0070685_100591992 573
143 3300005535 Ga0070684_100090957 Ga0070684_1000909571 573
144 3300005548 Ga0070665_100093708 Ga0070665_1000937082 573
145 3300005616 Ga0068852_100112505 Ga0068852_1001125052 573
146 3300005618 Ga0068864_100079196 Ga0068864_1000791961 573
147 3300005719 Ga0068861_100076316 Ga0068861_1000763162 573
148 3300005841 Ga0068863_100033859 Ga0068863_1000338594 573
149 3300005981 Ga0081538_10049277 Ga0081538_100492773 573
150 3300009098 Ga0105245_10081495 Ga0105245_100814951 573
151 3300009098 Ga0105245_10181808 Ga0105245_101818081 573
152 3300009101 Ga0105247_10042325 Ga0105247_100423251 573
153 3300009148 Ga0105243_10049099 Ga0105243_100490993 573
154 3300009174 Ga0105241_10086403 Ga0105241_100864031 573
155 3300009177 Ga0105248_10098575 Ga0105248_100985753 573
156 3300009545 Ga0105237_10100558 Ga0105237_101005581 573
157 3300009551 Ga0105238_10080491 Ga0105238_100804911 573
158 3300013105 Ga0157369_10141764 Ga0157369_101417641 573
159 3300013307 Ga0157372_10137904 Ga0157372_101379042 573
160 3300014968 Ga0157379_10054188 Ga0157379_100541882 573
161 3300014969 Ga0157376_10128035 Ga0157376_101280351 573
162 3300017792 Ga0163161_10041002 Ga0163161_100410022 573
163 3300025900 Ga0207710_10028503 Ga0207710_100285032 573
164 3300025901 Ga0207688_10026315 Ga0207688_100263151 573
165 3300025918 Ga0207662_10031342 Ga0207662_100313423 573
166 3300025919 Ga0207657_10064123 Ga0207657_100641232 573
167 3300025927 Ga0207687_10066851 Ga0207687_100668511 573
168 3300025935 Ga0207709_10028735 Ga0207709_100287351 573
169 3300025937 Ga0207669_10039437 Ga0207669_100394371 573
170 3300025941 Ga0207711_10169531 Ga0207711_101695311 573
171 3300026118 Ga0207675_100101658 Ga0207675_1001016582 573
172 3300026121 Ga0207683_10007050 Ga0207683_100070508 573
173 3300026142 Ga0207698_10078390 Ga0207698_100783901 573
174 3300028380 Ga0268265_10070241 Ga0268265_100702411 573
175 3300042016 Ga0439463_011006 Ga0439463_011006_314_2074 573
176 3300048907 Ga0496104_0137008 Ga0496104_0137008_509_2272 573
177 3300048911 Ga0496108_0085937 Ga0496108_0085937_801_2564 573
178 3300048914 Ga0496111_0066054 Ga0496111_0066054_767_2530 573
179 3300005327 Ga0070658_10033201 Ga0070658_100332012 574
180 3300005329 Ga0070683_100043197 Ga0070683_1000431973 574
181 3300005336 Ga0070680_100065238 Ga0070680_1000652382 574
182 3300005339 Ga0070660_100065545 Ga0070660_1000655451 574
183 3300005344 Ga0070661_100031345 Ga0070661_1000313451 574
184 3300005345 Ga0070692_10023936 Ga0070692_100239361 574
185 3300005467 Ga0070706_100079425 Ga0070706_1000794252 574
186 3300005535 Ga0070684_100020518 Ga0070684_1000205185 574
187 3300013104 Ga0157370_10075308 Ga0157370_100753082 574
188 3300013105 Ga0157369_10070308 Ga0157369_100703083 574
189 3300025910 Ga0207684_10063577 Ga0207684_100635772 574
190 3300025912 Ga0207707_10081828 Ga0207707_100818282 574
191 3300025917 Ga0207660_10058296 Ga0207660_100582961 574
192 3300025920 Ga0207649_10049234 Ga0207649_100492342 574
193 3300028794 Ga0307515_10174241 Ga0307515_101742411 574
194 3300031730 Ga0307516_10104844 Ga0307516_101048442 574
195 3300033179 Ga0307507_10079390 Ga0307507_100793902 574
196 3300035091 Ga0373951_0000031 Ga0373951_0000031_51505_53259 574
197 3300048915 Ga0496112_0113582 Ga0496112_0113582_762_2552 574
198 3300031852 Ga0307410_10053038 Ga0307410_100530382 576
199 3300031903 Ga0307407_10038443 Ga0307407_100384431 576
200 3300031995 Ga0307409_100108630 Ga0307409_1001086302 576
201 3300032002 Ga0307416_100085600 Ga0307416_1000856001 576
202 3300032004 Ga0307414_10114894 Ga0307414_101148941 576
203 3300032126 Ga0307415_100056123 Ga0307415_1000561232 576
204 3300035725 Ga0373947_0075073 Ga0373947_0075073_200_1966 576
205 3300037068 Ga0373925_0060708 Ga0373925_0060708_388_2154 576
206 3300046511 Ga0495608_0060836 Ga0495608_0060836_166_1929 576
207 3300005467 Ga0070706_100094675 Ga0070706_1000946751 577
208 3300025910 Ga0207684_10069831 Ga0207684_100698311 577
209 3300025922 Ga0207646_10087334 Ga0207646_100873341 577
210 3300005937 Ga0081455_10012653 Ga0081455_100126538 578
211 3300031456 Ga0307513_10064877 Ga0307513_100648771 578
212 3300038443 Ga0395901_0175439 Ga0395901_0175439_225_1985 578
213 3300046492 Ga0495585_0028545 Ga0495585_0028545_118_1890 578
214 3300046518 Ga0495631_0026417 Ga0495631_0026417_169_1941 578
215 3300046523 Ga0495644_0016559 Ga0495644_0016559_887_2659 578
216 3300046525 Ga0495663_0008314 Ga0495663_0008314_461_2233 578
217 3300046537 Ga0495598_0005980 Ga0495598_0005980_741_2513 578
218 3300046664 Ga0495659_0016021 Ga0495659_0016021_16_1788 578
219 3300046691 Ga0495670_0020389 Ga0495670_0020389_387_2159 578
220 3300047318 Ga0495636_0026328 Ga0495636_0026328_144_1916 578
221 3300005436 Ga0070713_100097377 Ga0070713_1000973771 580
222 3300031691 Ga0316579_10021740 Ga0316579_100217402 580
223 iso_pu_bacteria 2508501039 2508673046 580
224 3300005441 Ga0070700_100069546 Ga0070700_1000695461 582
225 3300005455 Ga0070663_100076470 Ga0070663_1000764701 582
226 3300026067 Ga0207678_10106817 Ga0207678_101068171 582
227 3300026075 Ga0207708_10089804 Ga0207708_100898041 582
228 3300027907 Ga0207428_10100418 Ga0207428_101004182 582
229 3300031711 Ga0265314_10058906 Ga0265314_100589062 582
230 3300035118 Ga0373954_0030712 Ga0373954_0030712_379_2199 582
231 3300053088 Ga0500644_0004394 Ga0500644_0004394_1501_3336 582
232 3300053134 Ga0500658_0009201 Ga0500658_0009201_207_2042 582
233 3300021377 Ga0213874_10006968 Ga0213874_100069682 583
234 3300039450 Ga0436363_1635154 Ga0436363_1635154_998_2890 583
235 3300025915 Ga0207693_10011684 Ga0207693_100116842 584
236 3300049576 Ga0501040_0038721 Ga0501040_0038721_88_1890 584
237 3300049590 Ga0501074_0018116 Ga0501074_0018116_464_2266 584
238 3300009545 Ga0105237_10083713 Ga0105237_100837132 586
239 3300013102 Ga0157371_10019120 Ga0157371_100191204 586
240 3300013104 Ga0157370_10015418 Ga0157370_100154181 586
241 3300025929 Ga0207664_10073424 Ga0207664_100734242 586
242 3300025939 Ga0207665_10072530 Ga0207665_100725301 586
243 3300031456 Ga0307513_10000175 Ga0307513_1000017572 586
244 3300060353 Ga0501082_0029196 Ga0501082_0029196_2775_4583 586
245 3300005985 Ga0081539_10039698 Ga0081539_100396983 587
246 3300006028 Ga0070717_10083854 Ga0070717_100838541 587
247 3300025944 Ga0207661_10169720 Ga0207661_101697201 587
248 3300048905 Ga0496102_0027189 Ga0496102_0027189_741_2552 587
249 3300048917 Ga0496114_0015468 Ga0496114_0015468_2531_4342 587
250 3300005435 Ga0070714_100085813 Ga0070714_1000858131 588
251 3300005436 Ga0070713_100149924 Ga0070713_1001499241 588
252 3300005445 Ga0070708_100078131 Ga0070708_1000781311 588
253 3300005468 Ga0070707_100010111 Ga0070707_1000101113 588
254 3300014968 Ga0157379_10097123 Ga0157379_100971231 588
255 3300025922 Ga0207646_10013653 Ga0207646_100136535 588
256 3300025927 Ga0207687_10117866 Ga0207687_101178661 588
257 3300025929 Ga0207664_10060652 Ga0207664_100606521 588
258 3300042007 Ga0439449_0011210 Ga0439449_0011210_831_2636 588
259 3300046520 Ga0495637_0024684 Ga0495637_0024684_231_2036 588
260 3300047443 Ga0495687_026132 Ga0495687_026132_745_2550 588
261 3300009094 Ga0111539_10205517 Ga0111539_102055171 589
262 3300039437 Ga0436365_1154087 Ga0436365_1154087_3354_5156 589
263 3300039453 Ga0436362_0910875 Ga0436362_0910875_728_2530 589
264 3300046689 Ga0495613_0063420 Ga0495613_0063420_595_2397 589
265 3300050511 nmdc:mga08y16_79726_c1 nmdc:mga08y16_79726_c1_259_2058 589
266 3300026121 Ga0207683_10104246 Ga0207683_101042461 590
267 3300046461 Ga0495641_0041237 Ga0495641_0041237_177_1994 590
268 3300005406 Ga0070703_10009065 Ga0070703_100090652 591
269 3300005458 Ga0070681_10103729 Ga0070681_101037291 591
270 3300005467 Ga0070706_100096580 Ga0070706_1000965802 591
271 3300005471 Ga0070698_100057887 Ga0070698_1000578872 591
272 3300005530 Ga0070679_100091021 Ga0070679_1000910211 591
273 3300025910 Ga0207684_10076415 Ga0207684_100764152 591
274 3300025921 Ga0207652_10089522 Ga0207652_100895222 591
275 3300025944 Ga0207661_10010364 Ga0207661_100103642 591
276 3300005467 Ga0070706_100035525 Ga0070706_1000355253 594
277 3300025910 Ga0207684_10022680 Ga0207684_100226803 594
278 3300047319 Ga0495674_0114619 Ga0495674_0114619_64_1884 594
279 3300047471 Ga0495684_0056369 Ga0495684_0056369_148_1968 594
280 3300037068 Ga0373925_0074823 Ga0373925_0074823_77_1927 598
281 3300006175 Ga0070712_100068584 Ga0070712_1000685842 599
282 3300025915 Ga0207693_10075405 Ga0207693_100754051 599
283 3300003373 JGI25407J50210_10000222 JGI25407J50210_100002227 600
284 3300005981 Ga0081538_10000346 Ga0081538_1000034646 600

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13655

RVT_N

N-terminal domain of reverse transcriptase

55

137

0.98

PF08388

GIIM

Group II intron, maturase-specific domain

392

470

0.97

PF00078

RVT_1

Reverse transcriptase (RNA-dependent DNA polymerase)

154

376

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mec-assembly1.cif.gz_C structure of a group ii intron retroelement after dna integration 0.8869 42 484
6mec-assembly1.cif.gz_C structure of a group ii intron retroelement after dna integration 0.8849 42 484
6ar1-assembly1.cif.gz_A structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.8672 82 431
6ar1-assembly2.cif.gz_D structure of a thermostable group ii intron reverse transcriptase with template-primer and its functional and evolutionary implications (rt/duplex (nat)) 0.8656 82 431
8t2r-assembly1.cif.gz_D structure of a group ii intron ribonucleoprotein in the pre-ligation (pre-2f) state 0.8565 71 436
ID Description Score Start End Superfamily
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.865 136 352 3.30.70.270
af_Q54EA8_349_594_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8306 140 343 3.30.70.270
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8262 137 353 3.20.20.210
af_Q54BA4_491_738_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8146 145 344 3.30.70.270
af_A0A2R8QHP1_433_684_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.7781 139 356 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A6B3C734-F1-model_v4 Group II intron reverse transcriptase/maturase 0.9797 37 259 GO:0003964
AF-A0A6P1I8B7-F1-model_v4 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) 0.9785 23 339 GO:0003720
AF-A0A5M3WAX4-F1-model_v4 Reverse transcriptase N-terminal domain-containing protein 0.9759 28 152
AF-A0A2T0LID2-F1-model_v4 Group II intron reverse transcriptase/maturase 0.9744 23 404 GO:0003964
AF-A0A428Z6S1-F1-model_v4 Reverse transcriptase domain-containing protein 0.9709 270 511

Feature Viewer

pLDDT pTM Quality
79.28 0.71 High
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Predicted Structure (AlphaFold2)

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