F385943

General Info

Members Datasets Scaffolds Average Seq Length
283 214 176 603

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8016530956|8016534639
Length 733
Sequence VDITGGLPRPRGKPGDFTADRRVLVLIGMAVLVGSLGAGAAWVLLKLIALVTNLVWFGHISTENVSLANAHPGIWMVLAPALGGLVIGLMARFGSEKIRGHGIPEAIEAILIGGSRMQPKVAILKPLSSAVSIGSGGPFGAEGPIIMTGGAIGSIFAQCFHLTAAERKTLLVAGAAAGMTAIFGTPIAAVLLAVELLLFEWKPRSFLPVVTGAVISAAWRPLLFGTGPLFPFAERPDLPWWGLAAAVGVGIVAGLQSGLMTRLLYAIEDLFDHLPVHWMWWPMLGGLAVGLGGLIDPRALGVGYDVIADLLSGHMARDEAIRLLLVKSAIWVIALSSGTSGGVLAPLLILGGTAGWIEGLVLPGGTSFWALVGMAAMMGGTMRSPLTGVMFAIELTGNIDMLLPLLAATGAAHAVTVLLLKRSILTEKIARRGQHITREYAIDPFELLRAADVMVTNVDTLPVDMPVDAAVAFFTSDQRPSQILSGGRRRRAARRHGHPCRRAALAHRGRSPGRNARRCRVGYVGSGGTSRRRPGAGRRSHGRLGYRPLAGGRPRQPSCGGSGGAQGSAANSRGRECAGGGPQRIFPARKGACAGGADRGSSAPLNSSTEIPAPTGMSMTRVRCITEMGMGVDVHGKDATKAAKRAVSDAIRHSSLGFFRMINKTANDMFVDVTIAVPNPESVDKEAVAKELPYGTVTVNAVKGGLEIPSAPEQGNDPILIANAAVIVSFEKD

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
4 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
5 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
6 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
7 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
8 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
9 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
10 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
11 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
12 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
13 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
14 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
15 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
16 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
17 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
18 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
19 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
20 2643221607 Rhizobium sp. Root73 Isolate Unclassified
21 2643221610 Ensifer sp. Root74 Isolate Unclassified
22 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
23 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
24 2643221674 Devosia sp. Root436 Isolate Unclassified
25 2643221675 Ensifer sp. Root1298 Isolate Unclassified
26 2643221680 Ensifer sp. Root1312 Isolate Unclassified
27 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
28 2643221688 Rhizobium sp. Root482 Isolate Unclassified
29 2643221726 Ensifer sp. Root954 Isolate Unclassified
30 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
31 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
32 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
33 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
34 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
35 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
36 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
37 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
38 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
39 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
40 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
41 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
42 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
43 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
44 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
45 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
46 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
47 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
48 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
49 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
50 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
51 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
52 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
53 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
54 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
55 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
56 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
57 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
58 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
59 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
60 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
61 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
62 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
63 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
64 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
65 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
66 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
67 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
68 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
69 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
70 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
71 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
72 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
73 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
74 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
75 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
76 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
77 2996887358 Rhizobium sp. R711 Isolate Nodule
78 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
79 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
80 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
81 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
82 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
83 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
84 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
85 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
86 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
87 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
88 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
89 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
90 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
91 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
92 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
93 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
94 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
95 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
96 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
97 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
98 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
99 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
100 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
101 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
102 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
103 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
104 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
105 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
106 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
107 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
108 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
109 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
110 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
111 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
112 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
114 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
115 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
117 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
118 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
120 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
122 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
143 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
144 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
145 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
146 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
147 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
178 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
179 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
180 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
183 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
184 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
185 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
189 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
190 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
193 8005321885 Rhizobium sp. R72 Isolate Nodule
194 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
195 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
196 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
197 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
198 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
199 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
200 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
201 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
202 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
203 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
204 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
205 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
206 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
207 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
208 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
209 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
210 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
211 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
212 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
213 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule
214 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 62.19
Metatranscriptomes 0
Isolates 37.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.61
Nodule 22.61
Rhizoplane 2.83
Rhizosphere 36.04
Stem 0
Stem Tuber 0
Unclassified 21.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001317 3300002773 Bacteria 11036
2 JGI25152J39213_1003472 3300002773 Bacteria 5365
3 JGI25151J46595_10000685 3300003187 Bacteria 28595
4 JGI25165J46597_1001268 3300003214 Bacteria 14798
5 JGI25153J46596_10003061 3300003215 Bacteria 9445
6 JGI25153J46596_10009609 3300003215 Bacteria 4465
7 JGI25160J50197_1004480 3300003354 Bacteria 6029
8 JGI25161J50226_1000072 3300003374 Bacteria 86646
9 JGI25161J50226_1000196 3300003374 Bacteria 39595
10 Ga0055526_1002257 3300003771 Bacteria 13169
11 Ga0055524_1001029 3300003775 Bacteria 17219
12 Ga0055524_1010326 3300003775 Bacteria 3727
13 Ga0055528_1000788 3300003790 Bacteria 21984
14 Ga0055528_1007909 3300003790 Bacteria 4637
15 Ga0055540_1002669 3300003792 Bacteria 9205
16 Ga0055543_1000020 3300004625 Bacteria 150535
17 Ga0065165_1000623 3300005262 Bacteria 51455
18 Ga0070666_10030369 3300005335 Bacteria 3560
19 Ga0070661_100047183 3300005344 Bacteria 3152
20 Ga0070659_100000646 3300005366 Bacteria 25468
21 Ga0070659_100030944 3300005366 Bacteria 4143
22 Ga0070665_100045891 3300005548 Bacteria 4389
23 Ga0068855_100028820 3300005563 Bacteria 6643
24 Ga0068852_100020906 3300005616 Bacteria 5211
25 Ga0105251_10011029 3300009011 Bacteria 5188
26 Ga0105240_10000019 3300009093 Bacteria 406211
27 Ga0105237_10000734 3300009545 Bacteria 45223
28 Ga0105237_10067497 3300009545 Bacteria 3570
29 Ga0105239_10000108 3300010375 Bacteria 116364
30 Ga0105239_10000574 3300010375 Bacteria 52563
31 Ga0105239_10001820 3300010375 Bacteria 27929
32 Ga0105239_10055109 3300010375 Bacteria 4361
33 Ga0157373_10000349 3300013100 Bacteria 37426
34 Ga0157373_10003700 3300013100 Bacteria 11571
35 Ga0157371_10005960 3300013102 Bacteria 10167
36 Ga0157370_10000131 3300013104 Bacteria 89805
37 Ga0157370_10098456 3300013104 Bacteria 2742
38 Ga0157369_10011658 3300013105 Bacteria 9982
39 Ga0157369_10177087 3300013105 Bacteria 2245
40 Ga0157372_10002926 3300013307 Bacteria 18438
41 Ga0182007_10001206 3300015262 Bacteria 14037
42 Ga0213872_10006230 3300021361 Bacteria 6025
43 Ga0209436_100020 3300025208 Bacteria 104602
44 Ga0209437_100058 3300025233 Bacteria 357279
45 Ga0209437_100326 3300025233 Bacteria 60536
46 Ga0209677_101055 3300025253 Bacteria 13090
47 Ga0209129_1000019 3300025258 Bacteria 460802
48 Ga0209129_1000944 3300025258 Bacteria 17479
49 Ga0209129_1001556 3300025258 Bacteria 12610
50 Ga0209233_1000354 3300025261 Bacteria 42911
51 Ga0209233_1000380 3300025261 Bacteria 38801
52 Ga0209673_1000054 3300025273 Bacteria 279116
53 Ga0209673_1002364 3300025273 Bacteria 13261
54 Ga0209673_1004318 3300025273 Bacteria 7670
55 Ga0209130_1000004 3300025284 Bacteria 633436
56 Ga0209130_1000083 3300025284 Bacteria 162582
57 Ga0209025_1000648 3300025294 Bacteria 60937
58 Ga0209025_1009296 3300025294 Bacteria 6881
59 Ga0209564_1000630 3300025295 Bacteria 53795
60 Ga0209758_1000321 3300025297 Bacteria 92591
61 Ga0209758_1000694 3300025297 Bacteria 49934
62 Ga0209256_1000866 3300025299 Bacteria 37550
63 Ga0209256_1003106 3300025299 Bacteria 12152
64 Ga0209256_1004692 3300025299 Bacteria 8381
65 Ga0209256_1005644 3300025299 Bacteria 7058
66 Ga0209256_1015459 3300025299 Bacteria 2667
67 Ga0207426_1000003 3300025302 Bacteria 1063212
68 Ga0207426_1000173 3300025302 Bacteria 162697
69 Ga0207426_1001700 3300025302 Bacteria 16941
70 Ga0207426_1003527 3300025302 Bacteria 8383
71 Ga0207680_10000822 3300025903 Bacteria 14639
72 Ga0207654_10022593 3300025911 Bacteria 3358
73 Ga0207707_10057136 3300025912 Bacteria 3396
74 Ga0207707_10059590 3300025912 Bacteria 3321
75 Ga0207695_10000049 3300025913 Bacteria 406233
76 Ga0207695_10000261 3300025913 Bacteria 133038
77 Ga0207671_10000045 3300025914 Bacteria 201245
78 Ga0207671_10000591 3300025914 Bacteria 48440
79 Ga0207671_10056666 3300025914 Bacteria 2904
80 Ga0207657_10018553 3300025919 Bacteria 6633
81 Ga0207657_10040513 3300025919 Bacteria 4127
82 Ga0207694_10012533 3300025924 Bacteria 6391
83 Ga0207690_10001096 3300025932 Bacteria 17232
84 Ga0207690_10023037 3300025932 Bacteria 3882
85 Ga0207690_10042798 3300025932 Bacteria 2977
86 Ga0207667_10003460 3300025949 Bacteria 19493
87 Ga0207639_10003722 3300026041 Bacteria 10262
88 Ga0207702_10054822 3300026078 Bacteria 3379
89 Ga0207698_10027897 3300026142 Bacteria 4016
90 Ga0268266_10001569 3300028379 Bacteria 26708
91 Ga0265327_10000360 3300031251 Bacteria 86617
92 Ga0395899_0000018 3300037312 Bacteria 423194
93 Ga0395899_0025217 3300037312 Bacteria 4489
94 Ga0395900_0030928 3300037418 Bacteria 5498
95 Ga0395898_0040367 3300037466 Bacteria 4615
96 Ga0395898_0049747 3300037466 Bacteria 4106
97 Ga0395905_0003992 3300037471 Bacteria 15513
98 Ga0436364_0596462 3300037853 Bacteria 18072
99 Ga0395901_0016978 3300038443 Bacteria 7417
100 Ga0395901_0020301 3300038443 Bacteria 6801
101 Ga0436365_0608955 3300039437 Bacteria 5288
102 Ga0436365_1884511 3300039437 Bacteria 98004
103 Ga0436361_0852795 3300039447 Bacteria 5111
104 Ga0495606_0005907 3300046507 Bacteria 11504
105 Ga0495610_0011936 3300046512 Bacteria 5269
106 Ga0495616_0000254 3300046513 Bacteria 43310
107 Ga0495635_0027223 3300046663 Bacteria 3977
108 Ga0495686_0000852 3300047472 Bacteria 39191
109 Ga0496102_0008275 3300048905 Bacteria 8910
110 Ga0496103_0005424 3300048906 Bacteria 7631
111 Ga0496103_0082321 3300048906 Bacteria 2025
112 Ga0496104_0008116 3300048907 Bacteria 9316
113 Ga0496111_0020396 3300048914 Bacteria 4614
114 Ga0496113_0085811 3300048916 Bacteria 2418
115 Ga0496114_0090146 3300048917 Bacteria 2603
116 Ga0496114_0100673 3300048917 Bacteria 2466
117 Ga0496116_0016460 3300048919 Bacteria 5784
118 Ga0496116_0046802 3300048919 Bacteria 2916
119 Ga0496117_0000674 3300048920 Bacteria 54521
120 Ga0496117_0000926 3300048920 Bacteria 44886
121 Ga0496117_0045935 3300048920 Bacteria 3148
122 Ga0496118_0001442 3300048921 Bacteria 35788
123 Ga0496118_0001977 3300048921 Bacteria 29110
124 Ga0496118_0006293 3300048921 Bacteria 13125
125 Ga0496119_0000887 3300048922 Bacteria 39179
126 Ga0496119_0009700 3300048922 Bacteria 8199
127 Ga0496119_0022953 3300048922 Bacteria 4444
128 Ga0496120_0002654 3300048923 Bacteria 17651
129 Ga0496120_0005427 3300048923 Bacteria 10171
130 Ga0496121_0000991 3300048924 Bacteria 50787
131 Ga0496121_0011470 3300048924 Bacteria 9835
132 Ga0496121_0013450 3300048924 Bacteria 8787
133 Ga0496122_0005575 3300048925 Bacteria 14902
134 Ga0496122_0011356 3300048925 Bacteria 9031
135 Ga0496122_0011447 3300048925 Bacteria 8978
136 Ga0496123_0005763 3300048926 Bacteria 12319
137 Ga0496123_0009592 3300048926 Bacteria 8694
138 Ga0496124_0010300 3300048927 Bacteria 9488
139 Ga0496124_0015909 3300048927 Bacteria 7182
140 Ga0496124_0042182 3300048927 Bacteria 3931
141 Ga0496125_0010411 3300048928 Bacteria 9410
142 Ga0496126_0014667 3300048929 Bacteria 7910
143 Ga0496126_0030379 3300048929 Bacteria 5118
144 Ga0496126_0058931 3300048929 Bacteria 3460
145 Ga0496126_0088446 3300048929 Bacteria 2728
146 Ga0501032_0000320 3300049569 Bacteria 40199
147 Ga0501033_0000968 3300049570 Bacteria 26054
148 Ga0501033_0001194 3300049570 Bacteria 23444
149 Ga0501033_0017566 3300049570 Bacteria 5404
150 Ga0501034_0000058 3300049571 Bacteria 198554
151 Ga0501036_0001143 3300049572 Bacteria 20195
152 Ga0501037_0000700 3300049573 Bacteria 25505
153 Ga0501038_0000059 3300049574 Bacteria 92319
154 Ga0501039_0001176 3300049575 Bacteria 19201
155 Ga0501043_0008489 3300049579 Bacteria 8086
156 Ga0501046_0002041 3300049580 Bacteria 19193
157 Ga0501046_0036506 3300049580 Bacteria 3954
158 Ga0501047_0000022 3300049581 Bacteria 249062
159 Ga0501048_0001669 3300049582 Bacteria 16903
160 Ga0501067_0004416 3300049583 Bacteria 7752
161 Ga0501068_0002467 3300049584 Bacteria 9824
162 Ga0501070_0001070 3300049586 Bacteria 24549
163 Ga0501072_0000449 3300049588 Bacteria 29627
164 Ga0501073_0000604 3300049589 Bacteria 25323
165 Ga0501074_0000028 3300049590 Bacteria 67595
166 Ga0501079_0001041 3300049741 Bacteria 19211
167 Ga0501080_0012552 3300049742 Bacteria 7768
168 Ga0501083_0001278 3300049744 Bacteria 17040
169 Ga0501035_0000240 3300049822 Bacteria 65635
170 Ga0501044_0004734 3300049823 Bacteria 15212
171 Ga0501044_0006000 3300049823 Bacteria 13417
172 Ga0501044_0040008 3300049823 Bacteria 4888
173 Ga0501045_0007836 3300049824 Bacteria 7430
174 Ga0500647_0020463 3300053091 Bacteria 3080
175 Ga0500572_000252 3300053111 Bacteria 19253
176 Ga0501084_0011310 3300054114 Bacteria 7390

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8016566248 8016572984 476
2 iso_pu_bacteria 8016530956 8016534639 558
3 iso_pu_bacteria 8016595262 8016600433 558
4 iso_pu_bacteria 8016603502 8016610305 567
5 3300003215 JGI25153J46596_10009609 JGI25153J46596_100096093 578
6 3300025297 Ga0209758_1000321 Ga0209758_10003216 578
7 3300049580 Ga0501046_0036506 Ga0501046_0036506_1425_3254 579
8 3300047472 Ga0495686_0000852 Ga0495686_0000852_22944_24737 583
9 3300013100 Ga0157373_10000349 Ga0157373_100003495 584
10 3300048929 Ga0496126_0088446 Ga0496126_0088446_702_2516 584
11 3300003214 JGI25165J46597_1001268 JGI25165J46597_10012689 585
12 3300003374 JGI25161J50226_1000072 JGI25161J50226_100007232 585
13 3300005262 Ga0065165_1000623 Ga0065165_10006239 585
14 3300005335 Ga0070666_10030369 Ga0070666_100303693 585
15 3300009093 Ga0105240_10000019 Ga0105240_10000019298 585
16 3300009545 Ga0105237_10000734 Ga0105237_1000073415 585
17 3300009545 Ga0105237_10067497 Ga0105237_100674972 585
18 3300010375 Ga0105239_10000574 Ga0105239_1000057415 585
19 3300013104 Ga0157370_10000131 Ga0157370_1000013196 585
20 3300013105 Ga0157369_10177087 Ga0157369_101770872 585
21 3300015262 Ga0182007_10001206 Ga0182007_100012064 585
22 3300025233 Ga0209437_100058 Ga0209437_100058308 585
23 3300025253 Ga0209677_101055 Ga0209677_1010553 585
24 3300025261 Ga0209233_1000354 Ga0209233_100035416 585
25 3300025261 Ga0209233_1000380 Ga0209233_100038029 585
26 3300025284 Ga0209130_1000083 Ga0209130_100008357 585
27 3300025302 Ga0207426_1000173 Ga0207426_100017357 585
28 3300025903 Ga0207680_10000822 Ga0207680_100008223 585
29 3300025913 Ga0207695_10000049 Ga0207695_10000049301 585
30 3300025914 Ga0207671_10000591 Ga0207671_1000059151 585
31 3300025914 Ga0207671_10056666 Ga0207671_100566661 585
32 3300025924 Ga0207694_10012533 Ga0207694_100125334 585
33 3300031251 Ga0265327_10000360 Ga0265327_1000036052 585
34 3300046513 Ga0495616_0000254 Ga0495616_0000254_26076_27872 585
35 3300048905 Ga0496102_0008275 Ga0496102_0008275_5359_7158 585
36 3300048906 Ga0496103_0005424 Ga0496103_0005424_4319_6118 585
37 3300048916 Ga0496113_0085811 Ga0496113_0085811_267_2066 585
38 3300048919 Ga0496116_0046802 Ga0496116_0046802_549_2348 585
39 3300048920 Ga0496117_0000926 Ga0496117_0000926_42539_44338 585
40 3300048921 Ga0496118_0001977 Ga0496118_0001977_25381_27180 585
41 3300048922 Ga0496119_0009700 Ga0496119_0009700_5852_7651 585
42 3300048923 Ga0496120_0005427 Ga0496120_0005427_6064_7863 585
43 3300048924 Ga0496121_0011470 Ga0496121_0011470_1823_3622 585
44 3300048925 Ga0496122_0011356 Ga0496122_0011356_4749_6557 585
45 3300048925 Ga0496122_0011447 Ga0496122_0011447_1823_3622 585
46 3300048926 Ga0496123_0005763 Ga0496123_0005763_9924_11732 585
47 3300048926 Ga0496123_0009592 Ga0496123_0009592_5383_7182 585
48 3300048927 Ga0496124_0010300 Ga0496124_0010300_5923_7722 585
49 3300048929 Ga0496126_0030379 Ga0496126_0030379_2771_4570 585
50 iso_pu_bacteria 2524023209 2524462081 585
51 iso_pu_bacteria 2582581307 2585274171 585
52 iso_pu_bacteria 2582581308 2585280418 585
53 iso_pu_bacteria 2585427527 2585532646 585
54 iso_pu_bacteria 2585427530 2585554338 585
55 iso_pu_bacteria 2585427531 2585560620 585
56 iso_pu_bacteria 2585427609 2585903582 585
57 iso_pu_bacteria 2585428125 2587981298 585
58 iso_pu_bacteria 2615840626 2616307283 585
59 iso_pu_bacteria 2617270742 2617383501 585
60 iso_pu_bacteria 2643221552 2643779019 585
61 iso_pu_bacteria 2818991453 2819639815 585
62 iso_pu_bacteria 2842298080 2842298580 585
63 iso_pu_bacteria 2842357229 2842362432 585
64 iso_pu_bacteria 2842482326 2842483505 585
65 iso_pu_bacteria 2842509118 2842510609 585
66 iso_pu_bacteria 2852387548 2852391065 585
67 iso_pu_bacteria 8046767195 8046772023 585
68 iso_pu_bacteria 8057575449 8057577513 585
69 3300013100 Ga0157373_10003700 Ga0157373_100037006 586
70 3300025912 Ga0207707_10057136 Ga0207707_100571362 586
71 3300037312 Ga0395899_0000018 Ga0395899_0000018_164341_166131 586
72 3300037418 Ga0395900_0030928 Ga0395900_0030928_1814_3616 586
73 3300037466 Ga0395898_0049747 Ga0395898_0049747_698_2500 586
74 3300038443 Ga0395901_0020301 Ga0395901_0020301_788_2590 586
75 iso_pu_bacteria 2524023205 2524437541 586
76 iso_pu_bacteria 2617270735 2617347326 586
77 iso_pu_bacteria 2744054633 2745079673 586
78 iso_pu_bacteria 2824600985 2824604058 586
79 iso_pu_bacteria 2824609381 2824610327 586
80 iso_pu_bacteria 2824653114 2824658032 586
81 iso_pu_bacteria 2824704595 2824708985 586
82 iso_pu_bacteria 2824753945 2824759567 586
83 iso_pu_bacteria 2824763712 2824770030 586
84 iso_pu_bacteria 2824773399 2824775451 586
85 iso_pu_bacteria 2838122688 2838123545 586
86 iso_pu_bacteria 2841941048 2841946810 586
87 iso_pu_bacteria 2841949485 2841949645 586
88 iso_pu_bacteria 2841966195 2841971847 586
89 iso_pu_bacteria 2841974524 2841974805 586
90 iso_pu_bacteria 2841983080 2841983631 586
91 iso_pu_bacteria 2844315083 2844319256 586
92 iso_pu_bacteria 2876761206 2876764710 586
93 iso_pu_bacteria 2888419890 2888424728 586
94 iso_pu_bacteria 2903727486 2903731098 586
95 iso_pu_bacteria 2904711408 2904714855 586
96 iso_pu_bacteria 2906602504 2906607395 586
97 iso_pu_bacteria 2935769743 2935771852 586
98 iso_pu_bacteria 2935777560 2935778711 586
99 iso_pu_bacteria 2935785616 2935788903 586
100 iso_pu_bacteria 2935793552 2935795297 586
101 iso_pu_bacteria 2941531003 2941533010 586
102 iso_pu_bacteria 3005594810 3005599426 586
103 iso_pu_bacteria 3005718088 3005722501 586
104 iso_pu_bacteria 8016522445 8016529428 586
105 iso_pu_bacteria 8016539877 8016547859 586
106 iso_pu_bacteria 8016548790 8016554275 586
107 iso_pu_bacteria 8016557553 8016562651 586
108 iso_pu_bacteria 8016575299 8016577136 586
109 iso_pu_bacteria 8016613128 8016614626 586
110 iso_pu_bacteria 8016622563 8016626371 586
111 iso_pu_bacteria 8019530166 8019534404 586
112 iso_pu_bacteria 8019538911 8019545065 586
113 iso_pu_bacteria 8019547302 8019553461 586
114 iso_pu_bacteria 8056967851 8056968221 586
115 3300003775 Ga0055524_1001029 Ga0055524_10010294 587
116 3300025299 Ga0209256_1000866 Ga0209256_10008664 587
117 3300037853 Ga0436364_0596462 Ga0436364_0596462_14245_16053 587
118 3300046512 Ga0495610_0011936 Ga0495610_0011936_183_2015 587
119 3300049570 Ga0501033_0001194 Ga0501033_0001194_15759_17552 587
120 3300049823 Ga0501044_0004734 Ga0501044_0004734_9507_11300 587
121 3300053091 Ga0500647_0020463 Ga0500647_0020463_927_2720 587
122 3300053111 Ga0500572_000252 Ga0500572_000252_8645_10438 587
123 iso_pu_bacteria 2513237141 2513894727 587
124 iso_pu_bacteria 2643221610 2644064524 587
125 iso_pu_bacteria 2643221675 2644419595 587
126 iso_pu_bacteria 2643221680 2644452952 587
127 iso_pu_bacteria 2643221726 2644691943 587
128 iso_pu_bacteria 2844533157 2844538373 587
129 iso_pu_bacteria 643348564 643599833 587
130 3300010375 Ga0105239_10001820 Ga0105239_100018208 588
131 3300021361 Ga0213872_10006230 Ga0213872_100062305 588
132 3300039437 Ga0436365_1884511 Ga0436365_1884511_21273_23057 588
133 3300039447 Ga0436361_0852795 Ga0436361_0852795_2465_4258 588
134 3300002773 JGI25152J39213_1003472 JGI25152J39213_10034725 589
135 3300003187 JGI25151J46595_10000685 JGI25151J46595_100006852 589
136 3300003775 Ga0055524_1010326 Ga0055524_10103261 589
137 3300003790 Ga0055528_1000788 Ga0055528_100078823 589
138 3300025258 Ga0209129_1000019 Ga0209129_100001959 589
139 3300025273 Ga0209673_1000054 Ga0209673_1000054117 589
140 3300025294 Ga0209025_1000648 Ga0209025_10006489 589
141 3300025294 Ga0209025_1009296 Ga0209025_10092966 589
142 3300025299 Ga0209256_1003106 Ga0209256_100310613 589
143 3300037466 Ga0395898_0040367 Ga0395898_0040367_1012_2799 589
144 3300037471 Ga0395905_0003992 Ga0395905_0003992_4106_5923 589
145 3300038443 Ga0395901_0016978 Ga0395901_0016978_500_2287 589
146 3300046507 Ga0495606_0005907 Ga0495606_0005907_6519_8321 589
147 3300048924 Ga0496121_0013450 Ga0496121_0013450_3202_5004 589
148 iso_pu_bacteria 2643221634 2644195444 589
149 iso_pu_bacteria 2643221688 2644495146 589
150 iso_pu_bacteria 2935694250 2935695025 589
151 iso_pu_bacteria 2996887358 2996891421 589
152 iso_pu_bacteria 8005321885 8005325948 589
153 3300003790 Ga0055528_1007909 Ga0055528_10079092 590
154 3300005366 Ga0070659_100000646 Ga0070659_10000064618 590
155 3300005366 Ga0070659_100030944 Ga0070659_1000309444 590
156 3300025258 Ga0209129_1000944 Ga0209129_10009443 590
157 3300025302 Ga0207426_1003527 Ga0207426_100352710 590
158 3300025912 Ga0207707_10059590 Ga0207707_100595903 590
159 3300025919 Ga0207657_10018553 Ga0207657_100185533 590
160 3300025919 Ga0207657_10040513 Ga0207657_100405132 590
161 3300025932 Ga0207690_10001096 Ga0207690_100010966 590
162 3300025932 Ga0207690_10023037 Ga0207690_100230372 590
163 3300039437 Ga0436365_0608955 Ga0436365_0608955_2800_4596 590
164 3300048906 Ga0496103_0082321 Ga0496103_0082321_183_2003 590
165 3300048907 Ga0496104_0008116 Ga0496104_0008116_2157_3977 590
166 3300048914 Ga0496111_0020396 Ga0496111_0020396_1930_3750 590
167 3300048917 Ga0496114_0090146 Ga0496114_0090146_560_2380 590
168 3300048922 Ga0496119_0022953 Ga0496119_0022953_156_1976 590
169 3300048927 Ga0496124_0015909 Ga0496124_0015909_2214_4034 590
170 3300049569 Ga0501032_0000320 Ga0501032_0000320_3296_5119 590
171 3300049570 Ga0501033_0000968 Ga0501033_0000968_12394_14217 590
172 3300049571 Ga0501034_0000058 Ga0501034_0000058_184338_186161 590
173 3300049572 Ga0501036_0001143 Ga0501036_0001143_12719_14542 590
174 3300049573 Ga0501037_0000700 Ga0501037_0000700_12394_14217 590
175 3300049574 Ga0501038_0000059 Ga0501038_0000059_79138_80961 590
176 3300049575 Ga0501039_0001176 Ga0501039_0001176_4985_6808 590
177 3300049579 Ga0501043_0008489 Ga0501043_0008489_707_2530 590
178 3300049580 Ga0501046_0002041 Ga0501046_0002041_5654_7477 590
179 3300049581 Ga0501047_0000022 Ga0501047_0000022_91745_93568 590
180 3300049582 Ga0501048_0001669 Ga0501048_0001669_3686_5509 590
181 3300049583 Ga0501067_0004416 Ga0501067_0004416_276_2099 590
182 3300049584 Ga0501068_0002467 Ga0501068_0002467_2349_4172 590
183 3300049586 Ga0501070_0001070 Ga0501070_0001070_2012_3835 590
184 3300049588 Ga0501072_0000449 Ga0501072_0000449_25894_27717 590
185 3300049589 Ga0501073_0000604 Ga0501073_0000604_20930_22753 590
186 3300049590 Ga0501074_0000028 Ga0501074_0000028_53379_55202 590
187 3300049741 Ga0501079_0001041 Ga0501079_0001041_5005_6828 590
188 3300049742 Ga0501080_0012552 Ga0501080_0012552_5243_7066 590
189 3300049744 Ga0501083_0001278 Ga0501083_0001278_2625_4448 590
190 3300049822 Ga0501035_0000240 Ga0501035_0000240_52770_54593 590
191 3300049823 Ga0501044_0006000 Ga0501044_0006000_707_2530 590
192 3300049824 Ga0501045_0007836 Ga0501045_0007836_726_2549 590
193 3300054114 Ga0501084_0011310 Ga0501084_0011310_3140_4963 590
194 iso_pu_bacteria 2582581294 2585202600 590
195 iso_pu_bacteria 2889306138 2889310487 590
196 iso_pu_bacteria 2935684952 2935692062 590
197 iso_pu_bacteria 2935713505 2935721901 590
198 iso_pu_bacteria 2935722832 2935731101 590
199 iso_pu_bacteria 2935732158 2935739037 590
200 iso_pu_bacteria 2935741537 2935747778 590
201 iso_pu_bacteria 2935750917 2935756362 590
202 iso_pu_bacteria 2935992306 2936001574 590
203 iso_pu_bacteria 2940556831 2940562276 590
204 3300005344 Ga0070661_100047183 Ga0070661_1000471831 591
205 3300005563 Ga0068855_100028820 Ga0068855_1000288206 591
206 3300010375 Ga0105239_10000108 Ga0105239_10000108106 591
207 3300013104 Ga0157370_10098456 Ga0157370_100984561 591
208 3300025233 Ga0209437_100326 Ga0209437_10032622 591
209 3300025913 Ga0207695_10000261 Ga0207695_1000026199 591
210 3300025914 Ga0207671_10000045 Ga0207671_10000045160 591
211 3300028379 Ga0268266_10001569 Ga0268266_100015699 591
212 3300048920 Ga0496117_0000674 Ga0496117_0000674_44897_46717 591
213 3300048921 Ga0496118_0001442 Ga0496118_0001442_7805_9625 591
214 3300048922 Ga0496119_0000887 Ga0496119_0000887_647_2467 591
215 3300048923 Ga0496120_0002654 Ga0496120_0002654_8038_9858 591
216 3300048924 Ga0496121_0000991 Ga0496121_0000991_41163_42983 591
217 3300048929 Ga0496126_0014667 Ga0496126_0014667_5385_7205 591
218 3300048929 Ga0496126_0058931 Ga0496126_0058931_1164_2966 591
219 3300049823 Ga0501044_0040008 Ga0501044_0040008_2493_4283 591
220 iso_pu_bacteria 2508501128 2509150507 591
221 iso_pu_bacteria 2582581308 2585282770 591
222 iso_pu_bacteria 2615840626 2616309786 591
223 iso_pu_bacteria 2643221607 2644049721 591
224 iso_pu_bacteria 2643221686 2644482002 591
225 iso_pu_bacteria 2929615660 2929616620 591
226 iso_pu_bacteria 2929624759 2929625363 591
227 iso_pu_bacteria 2933577622 2933578097 591
228 iso_pu_bacteria 2935827899 2935836116 591
229 iso_pu_bacteria 2941538514 2941539526 591
230 iso_pu_bacteria 8019576017 8019580384 591
231 iso_pu_bacteria 8019586578 8019588109 591
232 iso_pu_bacteria 8019608314 8019615300 591
233 iso_pu_bacteria 8055742211 8055748266 591
234 3300002773 JGI25152J39213_1001317 JGI25152J39213_10013178 592
235 3300003215 JGI25153J46596_10003061 JGI25153J46596_100030614 592
236 3300003354 JGI25160J50197_1004480 JGI25160J50197_10044804 592
237 3300003374 JGI25161J50226_1000196 JGI25161J50226_10001964 592
238 3300003771 Ga0055526_1002257 Ga0055526_10022573 592
239 3300003792 Ga0055540_1002669 Ga0055540_10026698 592
240 3300004625 Ga0055543_1000020 Ga0055543_1000020103 592
241 3300005548 Ga0070665_100045891 Ga0070665_1000458915 592
242 3300005616 Ga0068852_100020906 Ga0068852_1000209062 592
243 3300009011 Ga0105251_10011029 Ga0105251_100110293 592
244 3300010375 Ga0105239_10055109 Ga0105239_100551092 592
245 3300013102 Ga0157371_10005960 Ga0157371_100059603 592
246 3300013105 Ga0157369_10011658 Ga0157369_100116586 592
247 3300013307 Ga0157372_10002926 Ga0157372_1000292614 592
248 3300025208 Ga0209436_100020 Ga0209436_10002021 592
249 3300025258 Ga0209129_1001556 Ga0209129_10015563 592
250 3300025273 Ga0209673_1002364 Ga0209673_10023643 592
251 3300025273 Ga0209673_1004318 Ga0209673_10043185 592
252 3300025284 Ga0209130_1000004 Ga0209130_1000004266 592
253 3300025295 Ga0209564_1000630 Ga0209564_100063014 592
254 3300025297 Ga0209758_1000694 Ga0209758_100069441 592
255 3300025299 Ga0209256_1004692 Ga0209256_10046929 592
256 3300025299 Ga0209256_1005644 Ga0209256_10056442 592
257 3300025299 Ga0209256_1015459 Ga0209256_10154592 592
258 3300025302 Ga0207426_1000003 Ga0207426_1000003461 592
259 3300025302 Ga0207426_1001700 Ga0207426_100170010 592
260 3300025911 Ga0207654_10022593 Ga0207654_100225932 592
261 3300025932 Ga0207690_10042798 Ga0207690_100427983 592
262 3300025949 Ga0207667_10003460 Ga0207667_1000346016 592
263 3300026041 Ga0207639_10003722 Ga0207639_100037225 592
264 3300026078 Ga0207702_10054822 Ga0207702_100548224 592
265 3300026142 Ga0207698_10027897 Ga0207698_100278973 592
266 3300037312 Ga0395899_0025217 Ga0395899_0025217_1796_3622 592
267 3300046663 Ga0495635_0027223 Ga0495635_0027223_42_1865 592
268 3300048917 Ga0496114_0100673 Ga0496114_0100673_224_2116 592
269 3300048919 Ga0496116_0016460 Ga0496116_0016460_1012_2790 592
270 3300048920 Ga0496117_0045935 Ga0496117_0045935_1344_3134 592
271 3300048921 Ga0496118_0006293 Ga0496118_0006293_6367_8160 592
272 3300048925 Ga0496122_0005575 Ga0496122_0005575_6448_8241 592
273 3300048927 Ga0496124_0042182 Ga0496124_0042182_1750_3543 592
274 3300048928 Ga0496125_0010411 Ga0496125_0010411_690_2483 592
275 3300049570 Ga0501033_0017566 Ga0501033_0017566_3160_4977 592
276 iso_pu_bacteria 2524023210 2524468298 592
277 iso_pu_bacteria 2582581283 2585169459 592
278 iso_pu_bacteria 2582581304 2585258780 592
279 iso_pu_bacteria 2643221607 2644047997 592
280 iso_pu_bacteria 2643221636 2644203021 592
281 iso_pu_bacteria 2643221674 2644412513 592
282 iso_pu_bacteria 2643221686 2644480792 592
283 iso_pu_bacteria 3005409236 3005415554 592

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00654

Voltage_CLC

Voltage gated chloride channel

82

417

0.98

PF09585

Lin0512_fam

Conserved hypothetical protein (Lin0512_fam)

623

728

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d0j-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter 0.8809 13 419
6d0k-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter, e118q mutant 0.8808 13 419
6d0n-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter, v319g mutant 0.88 13 419
7n9w-assembly1.cif.gz_B clc-ec1 ph 4.5 100mm cl twist1 0.8733 15 425
1xkf-assembly1.cif.gz_B-2 crystal structure of hypoxic response protein i (hrpi) with two coordinated zinc ions 0.8721 440 564
ID Description Score Start End Superfamily
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9022 19 426 1.10.3080.10
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8955 18 417 1.10.3080.10
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8828 18 417 1.10.3080.10
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8798 19 426 1.10.3080.10
af_P96820_37_483_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8773 12 426 1.10.3080.10
ID Description Score Start End GO Terms
AF-A0A2X0IIZ7-F1-model_v4 Chloride channel protein 0.9593 19 439 GO:0005247
GO:0016020
AF-A0A6N6VT00-F1-model_v4 Chloride channel protein 0.9553 8 432 GO:0005247
GO:0016020
AF-A0A3M2BDJ4-F1-model_v4 Chloride channel protein 0.9513 60 406 GO:0005247
GO:0016020
AF-B8CXA3-F1-model_v4 Chloride channel core 0.9459 70 425 GO:0005247
GO:0016020
AF-A0A3S2BF99-F1-model_v4 deleted 0.945 75 218

Feature Viewer

pLDDT pTM Quality
83.17 0.71 High
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Predicted Structure (AlphaFold2)

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