F385796

General Info

Members Datasets Scaffolds Average Seq Length
283 182 566 140

Family's Representative Sequence

Representative Sequence 3300046674|Ga0495588_0324826|Ga0495588_0324826_177_665
Length 162
Sequence MKRRIKTPEKDLEIVMANRLVESIEKAYLKKEIPQFEVGDTVDVATRIIEGDKERIQVFSGTVIARKGRGINDIFTVRRIVNNEGVERIYPVNSPFIASVTVRRSGESRRAKLFYLRKRVGKAVRLTEKRRDKRDEAQPGVGGGEKVKESSKESPALAGAST

Samples

Sample ID Description Type Environment
1 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
64 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
109 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
110 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
132 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300059478 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 58R_AW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.23
Metatranscriptomes 7.77
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.65
Stem 0
Stem Tuber 0
Unclassified 12.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495588_0324826 3300046674 Bacteria 809
2 Ga0070658_11223265 3300005327 Bacteria 653
3 Ga0070683_100475006 3300005329 Bacteria 1194
4 Ga0070683_100515545 3300005329 Bacteria 1143
5 Ga0070683_100797789 3300005329 Bacteria 905
6 Ga0070683_101217090 3300005329 Unclassified 724
7 Ga0070670_100782599 3300005331 Bacteria 861
8 Ga0070666_10505735 3300005335 Bacteria 876
9 Ga0070666_10586104 3300005335 Bacteria 813
10 Ga0068868_101370882 3300005338 Bacteria 659
11 Ga0070689_101165146 3300005340 Unclassified 691
12 Ga0070675_100267640 3300005354 Bacteria 1499
13 Ga0070675_101044509 3300005354 Bacteria 751
14 Ga0070671_100943311 3300005355 Bacteria 755
15 Ga0070688_100878506 3300005365 Bacteria 706
16 Ga0070667_100033562 3300005367 Bacteria 4291
17 Ga0070709_11495768 3300005434 Unclassified 548
18 Ga0070714_100089483 3300005435 Bacteria 2695
19 Ga0070714_100168557 3300005435 Bacteria 1986
20 Ga0070713_100284384 3300005436 Bacteria 1518
21 Ga0070713_100822614 3300005436 Bacteria 891
22 Ga0070663_102061927 3300005455 Bacteria 514
23 Ga0070678_100058546 3300005456 Bacteria 2828
24 Ga0070681_10206538 3300005458 Bacteria 1881
25 Ga0068867_101249733 3300005459 Unclassified 684
26 Ga0068867_102362387 3300005459 Bacteria 506
27 Ga0070706_101145604 3300005467 Bacteria 715
28 Ga0070679_100594648 3300005530 Bacteria 1050
29 Ga0068853_100508712 3300005539 Unclassified 1138
30 Ga0070672_100650350 3300005543 Bacteria 921
31 Ga0070665_100088315 3300005548 Bacteria 3106
32 Ga0070665_101605629 3300005548 Bacteria 658
33 Ga0068855_100016923 3300005563 Bacteria 8768
34 Ga0068855_100219430 3300005563 Bacteria 2133
35 Ga0068855_101624402 3300005563 Bacteria 661
36 Ga0068855_102045629 3300005563 Unclassified 578
37 Ga0070664_100716204 3300005564 Bacteria 933
38 Ga0068857_100015724 3300005577 Bacteria 6619
39 Ga0070702_101386424 3300005615 Bacteria 574
40 Ga0068852_100217837 3300005616 Bacteria 1814
41 Ga0068864_100753691 3300005618 Bacteria 954
42 Ga0068858_100137927 3300005842 Bacteria 2289
43 Ga0068860_100299149 3300005843 Bacteria 1576
44 Ga0068860_101241004 3300005843 Bacteria 766
45 Ga0081539_10004420 3300005985 Bacteria 15558
46 Ga0070717_11307287 3300006028 Bacteria 659
47 Ga0097621_100244696 3300006237 Bacteria 1569
48 Ga0097621_100555136 3300006237 Bacteria 1046
49 Ga0097621_101940710 3300006237 Bacteria 562
50 Ga0068871_100773228 3300006358 Bacteria 884
51 Ga0075430_100019026 3300006846 Bacteria 5842
52 Ga0075431_100228475 3300006847 Bacteria 1897
53 Ga0105240_10434152 3300009093 Bacteria 1473
54 Ga0105245_10011604 3300009098 Bacteria 7676
55 Ga0105245_10085319 3300009098 Bacteria 2894
56 Ga0105245_11292756 3300009098 Bacteria 778
57 Ga0105247_10368622 3300009101 Bacteria 1015
58 Ga0105241_10051892 3300009174 Bacteria 3129
59 Ga0105241_10572082 3300009174 Bacteria 1017
60 Ga0105241_11309455 3300009174 Bacteria 690
61 Ga0105242_10744604 3300009176 Bacteria 964
62 Ga0105242_10979558 3300009176 Bacteria 852
63 Ga0105248_10438716 3300009177 Bacteria 1471
64 Ga0105248_10642188 3300009177 Bacteria 1197
65 Ga0105248_10903965 3300009177 Bacteria 997
66 Ga0105248_11823255 3300009177 Bacteria 690
67 Ga0105238_10944666 3300009551 Bacteria 882
68 Ga0105238_11980462 3300009551 Bacteria 616
69 Ga0105249_11463350 3300009553 Bacteria 755
70 Ga0105239_10641766 3300010375 Bacteria 1212
71 Ga0105239_10827615 3300010375 Bacteria 1061
72 Ga0105239_12026464 3300010375 Bacteria 668
73 Ga0157373_11193523 3300013100 Bacteria 573
74 Ga0157371_10124743 3300013102 Bacteria 1831
75 Ga0157371_10324825 3300013102 Bacteria 1117
76 Ga0157371_10687683 3300013102 Bacteria 765
77 Ga0157370_10123653 3300013104 Bacteria 2416
78 Ga0157370_10367889 3300013104 Unclassified 1325
79 Ga0157370_10394021 3300013104 Bacteria 1275
80 Ga0157370_11942868 3300013104 Bacteria 528
81 Ga0157369_10430593 3300013105 Bacteria 1367
82 Ga0157369_10907424 3300013105 Bacteria 903
83 Ga0157374_10680110 3300013296 Bacteria 1041
84 Ga0157374_10941551 3300013296 Bacteria 882
85 Ga0157374_11802636 3300013296 Bacteria 637
86 Ga0157374_11833153 3300013296 Bacteria 632
87 Ga0157374_12598164 3300013296 Bacteria 534
88 Ga0157378_11050796 3300013297 Bacteria 850
89 Ga0157378_11955348 3300013297 Bacteria 636
90 Ga0163162_10532242 3300013306 Bacteria 1304
91 Ga0163162_11280337 3300013306 Bacteria 833
92 Ga0157372_10140326 3300013307 Bacteria 2784
93 Ga0157372_10144891 3300013307 Bacteria 2739
94 Ga0157372_10253463 3300013307 Unclassified 2043
95 Ga0157372_10272792 3300013307 Bacteria 1966
96 Ga0157372_10651664 3300013307 Bacteria 1226
97 Ga0157372_10823844 3300013307 Bacteria 1078
98 Ga0157372_12566463 3300013307 Unclassified 585
99 Ga0157375_10959323 3300013308 Bacteria 996
100 Ga0157375_11704439 3300013308 Bacteria 746
101 Ga0157380_11316991 3300014326 Bacteria 770
102 Ga0182008_10776402 3300014497 Bacteria 554
103 Ga0157379_11984742 3300014968 Unclassified 575
104 Ga0157376_10978543 3300014969 Bacteria 868
105 Ga0197907_11339411 3300020069 Bacteria 1319
106 Ga0206356_10350827 3300020070 Bacteria 1789
107 Ga0206349_1982282 3300020075 Bacteria 1083
108 Ga0206355_1448310 3300020076 Bacteria 2162
109 Ga0206352_10822622 3300020078 Bacteria 1642
110 Ga0206352_11315332 3300020078 Unclassified 548
111 Ga0206354_10468107 3300020081 Unclassified 665
112 Ga0206354_11700947 3300020081 Bacteria 1317
113 Ga0224712_10093075 3300022467 Bacteria 1266
114 Ga0224712_10112794 3300022467 Bacteria 1168
115 Ga0224712_10129701 3300022467 Bacteria 1100
116 Ga0224712_10275486 3300022467 Unclassified 782
117 Ga0207692_10459654 3300025898 Bacteria 802
118 Ga0207680_10460309 3300025903 Bacteria 903
119 Ga0207705_10293899 3300025909 Bacteria 1245
120 Ga0207705_10931349 3300025909 Bacteria 672
121 Ga0207654_10043024 3300025911 Bacteria 2558
122 Ga0207654_10089987 3300025911 Bacteria 1869
123 Ga0207707_10190155 3300025912 Bacteria 1791
124 Ga0207695_10000104 3300025913 Bacteria 257201
125 Ga0207695_10365712 3300025913 Unclassified 1329
126 Ga0207695_11454867 3300025913 Bacteria 565
127 Ga0207671_11478592 3300025914 Bacteria 525
128 Ga0207649_10093111 3300025920 Unclassified 1977
129 Ga0207681_11009029 3300025923 Bacteria 698
130 Ga0207694_10336071 3300025924 Unclassified 1249
131 Ga0207650_10123805 3300025925 Bacteria 2016
132 Ga0207650_10464351 3300025925 Bacteria 1055
133 Ga0207659_10008025 3300025926 Bacteria 6532
134 Ga0207659_10512395 3300025926 Bacteria 1017
135 Ga0207687_10270062 3300025927 Bacteria 1359
136 Ga0207687_10503746 3300025927 Bacteria 1011
137 Ga0207700_10660860 3300025928 Bacteria 932
138 Ga0207700_11027062 3300025928 Bacteria 738
139 Ga0207700_11749382 3300025928 Bacteria 547
140 Ga0207664_10041783 3300025929 Bacteria 3574
141 Ga0207664_10057637 3300025929 Bacteria 3088
142 Ga0207664_10753138 3300025929 Unclassified 876
143 Ga0207644_10047045 3300025931 Bacteria 3077
144 Ga0207644_10817530 3300025931 Unclassified 780
145 Ga0207706_10427096 3300025933 Bacteria 1148
146 Ga0207686_10710413 3300025934 Bacteria 800
147 Ga0207691_10270487 3300025940 Bacteria 1463
148 Ga0207711_10586573 3300025941 Bacteria 1040
149 Ga0207711_11088954 3300025941 Bacteria 740
150 Ga0207711_11687403 3300025941 Bacteria 577
151 Ga0207689_10784520 3300025942 Unclassified 804
152 Ga0207661_10232034 3300025944 Bacteria 1635
153 Ga0207661_11050585 3300025944 Unclassified 750
154 Ga0207661_11072114 3300025944 Bacteria 742
155 Ga0207679_10123051 3300025945 Bacteria 2069
156 Ga0207679_10222452 3300025945 Bacteria 1589
157 Ga0207667_10322867 3300025949 Bacteria 1577
158 Ga0207667_10386289 3300025949 Bacteria 1426
159 Ga0207712_10125574 3300025961 Bacteria 1947
160 Ga0207658_10051096 3300025986 Bacteria 3045
161 Ga0207658_11498761 3300025986 Bacteria 617
162 Ga0207658_11793579 3300025986 Bacteria 560
163 Ga0207658_11929625 3300025986 Bacteria 538
164 Ga0207677_10868707 3300026023 Bacteria 811
165 Ga0207703_10460394 3300026035 Bacteria 1189
166 Ga0207678_10595052 3300026067 Bacteria 969
167 Ga0207702_11146931 3300026078 Unclassified 771
168 Ga0207641_10280607 3300026088 Bacteria 1567
169 Ga0207648_10830247 3300026089 Unclassified 861
170 Ga0207676_10060491 3300026095 Bacteria 2997
171 Ga0207674_10002572 3300026116 Bacteria 22860
172 Ga0207674_10125208 3300026116 Bacteria 2536
173 Ga0207683_10223404 3300026121 Bacteria 1716
174 Ga0207683_10956255 3300026121 Bacteria 795
175 Ga0207698_10722595 3300026142 Bacteria 993
176 Ga0268266_10002432 3300028379 Bacteria 20015
177 Ga0268266_10533729 3300028379 Bacteria 1123
178 Ga0268264_10030907 3300028381 Bacteria 4391
179 Ga0268264_10742063 3300028381 Bacteria 978
180 Ga0265338_10019031 3300028800 Bacteria 7314
181 Ga0265338_10066092 3300028800 Bacteria 3132
182 Ga0265324_10037306 3300029957 Bacteria 1689
183 Ga0265332_10068459 3300031238 Bacteria 1513
184 Ga0265339_10004945 3300031249 Bacteria 8977
185 Ga0265313_10120088 3300031595 Bacteria 1147
186 Ga0316576_10341043 3300031727 Bacteria 1116
187 Ga0307405_10829556 3300031731 Bacteria 777
188 Ga0307405_11235398 3300031731 Bacteria 648
189 Ga0307410_12033471 3300031852 Bacteria 513
190 Ga0307406_10213563 3300031901 Bacteria 1429
191 Ga0307406_11625513 3300031901 Bacteria 571
192 Ga0307409_100590318 3300031995 Bacteria 1096
193 Ga0307416_100793703 3300032002 Bacteria 1042
194 Ga0307416_101136586 3300032002 Bacteria 886
195 Ga0307414_10721209 3300032004 Bacteria 904
196 Ga0307411_10060750 3300032005 Bacteria 2512
197 Ga0307411_10270623 3300032005 Bacteria 1347
198 Ga0307415_100428032 3300032126 Bacteria 1138
199 Ga0373932_0343592 3300035112 Bacteria 566
200 Ga0373947_0074471 3300035725 Unclassified 2089
201 Ga0395899_0553532 3300037312 Bacteria 739
202 Ga0395900_0160440 3300037418 Bacteria 2294
203 Ga0395900_0542332 3300037418 Bacteria 1109
204 Ga0395900_0767089 3300037418 Bacteria 894
205 Ga0395898_0446266 3300037466 Bacteria 1232
206 Ga0395905_0488420 3300037471 Unclassified 1131
207 Ga0451853_1175678 3300041512 Bacteria 718
208 Ga0451577_0286477 3300042876 Bacteria 1493
209 Ga0451577_1645617 3300042876 Bacteria 566
210 Ga0453684_1537410 3300044712 Bacteria 685
211 Ga0453684_1876402 3300044712 Bacteria 607
212 Ga0466971_0205862 3300044719 Bacteria 930
213 Ga0451576_0000298 3300045051 Bacteria 120202
214 Ga0495592_0154192 3300046454 Bacteria 1586
215 Ga0495592_0240058 3300046454 Bacteria 1203
216 Ga0495580_0193141 3300046472 Bacteria 1404
217 Ga0495582_0161301 3300046473 Bacteria 1275
218 Ga0495605_0324925 3300046474 Unclassified 648
219 Ga0495639_0145260 3300046475 Bacteria 1142
220 Ga0495608_0205439 3300046511 Unclassified 1240
221 Ga0495618_0221248 3300046514 Unclassified 1194
222 Ga0495628_0080242 3300046516 Bacteria 2537
223 Ga0495628_0248925 3300046516 Bacteria 1327
224 Ga0495630_0040414 3300046517 Unclassified 3485
225 Ga0495586_0239580 3300046535 Bacteria 1034
226 Ga0495667_0470369 3300046559 Bacteria 789
227 Ga0495656_0055649 3300046615 Bacteria 1707
228 Ga0495635_0042010 3300046663 Bacteria 3159
229 Ga0495657_0127115 3300046675 Unclassified 1600
230 Ga0495613_0023442 3300046689 Unclassified 4598
231 Ga0495613_0981173 3300046689 Unclassified 543
232 Ga0495624_0002898 3300046690 Bacteria 12827
233 Ga0495581_0453969 3300047315 Bacteria 746
234 Ga0495674_0010967 3300047319 Bacteria 8562
235 Ga0495674_0338451 3300047319 Bacteria 1223
236 Ga0495675_0387618 3300047444 Unclassified 816
237 Ga0495684_0017869 3300047471 Bacteria 5464
238 Ga0495684_0412632 3300047471 Bacteria 946
239 Ga0495602_0737815 3300048088 Bacteria 666
240 Ga0501032_0188812 3300049569 Bacteria 1347
241 Ga0501033_0125609 3300049570 Bacteria 1860
242 Ga0501034_0000512 3300049571 Bacteria 62257
243 Ga0501034_0001397 3300049571 Bacteria 32468
244 Ga0501034_0305240 3300049571 Bacteria 1527
245 Ga0501034_1017598 3300049571 Bacteria 712
246 Ga0501037_0005923 3300049573 Bacteria 8926
247 Ga0501038_0000185 3300049574 Bacteria 53588
248 Ga0501039_0121521 3300049575 Bacteria 2047
249 Ga0501043_0089881 3300049579 Bacteria 2414
250 Ga0501043_0178302 3300049579 Bacteria 1656
251 Ga0501046_1179042 3300049580 Bacteria 527
252 Ga0501047_0013402 3300049581 Bacteria 7772
253 Ga0501047_0201879 3300049581 Bacteria 1849
254 Ga0501048_0087238 3300049582 Bacteria 2202
255 Ga0501070_0543556 3300049586 Bacteria 930
256 Ga0501073_0154060 3300049589 Bacteria 1593
257 Ga0501256_049464 3300049685 Bacteria 515
258 Ga0501080_0017665 3300049742 Bacteria 6598
259 Ga0501080_0023262 3300049742 Bacteria 5745
260 Ga0501080_0088333 3300049742 Bacteria 2880
261 Ga0501083_0184421 3300049744 Bacteria 1362
262 Ga0501035_0725392 3300049822 Bacteria 800
263 Ga0501044_0000355 3300049823 Bacteria 57341
264 Ga0501044_0028744 3300049823 Bacteria 5866
265 Ga0501044_0063927 3300049823 Bacteria 3758
266 Ga0501044_1075736 3300049823 Unclassified 674
267 nmdc:mga05p37_1044572_c1 3300050507 Bacteria 862
268 nmdc:mga0qj67_220484_c1 3300050509 Bacteria 1540
269 nmdc:mga06r32_112978_c1 3300050510 Bacteria 2673
270 nmdc:mga0rr50_510669_c1 3300050513 Bacteria 1022
271 Ga0495601_0499762 3300053077 Bacteria 785
272 Ga0501084_0974007 3300054114 Bacteria 713
273 Ga0587093_112484 3300059478 Bacteria 502
274 Ga0587066_123583 3300059490 Bacteria 614
275 Ga0587073_0022323 3300059492 Bacteria 1227
276 Ga0587073_0034778 3300059492 Bacteria 1064
277 Ga0587077_040568 3300059493 Bacteria 932
278 Ga0587077_234895 3300059493 Bacteria 523
279 Ga0587088_147734 3300059508 Bacteria 566
280 Ga0587094_092081 3300059513 Unclassified 575
281 Ga0587128_028685 3300059630 Bacteria 907
282 Ga0587079_240624 3300059647 Bacteria 511
283 Ga0501082_0037835 3300060353 Bacteria 4161
284 Ga0495588_0324826
285 Ga0070658_11223265
286 Ga0070683_100475006
287 Ga0070683_100515545
288 Ga0070683_100797789
289 Ga0070683_101217090
290 Ga0070670_100782599
291 Ga0070666_10505735
292 Ga0070666_10586104
293 Ga0068868_101370882
294 Ga0070689_101165146
295 Ga0070675_100267640
296 Ga0070675_101044509
297 Ga0070671_100943311
298 Ga0070688_100878506
299 Ga0070667_100033562
300 Ga0070709_11495768
301 Ga0070714_100089483
302 Ga0070714_100168557
303 Ga0070713_100284384
304 Ga0070713_100822614
305 Ga0070663_102061927
306 Ga0070678_100058546
307 Ga0070681_10206538
308 Ga0068867_101249733
309 Ga0068867_102362387
310 Ga0070706_101145604
311 Ga0070679_100594648
312 Ga0068853_100508712
313 Ga0070672_100650350
314 Ga0070665_100088315
315 Ga0070665_101605629
316 Ga0068855_100016923
317 Ga0068855_100219430
318 Ga0068855_101624402
319 Ga0068855_102045629
320 Ga0070664_100716204
321 Ga0068857_100015724
322 Ga0070702_101386424
323 Ga0068852_100217837
324 Ga0068864_100753691
325 Ga0068858_100137927
326 Ga0068860_100299149
327 Ga0068860_101241004
328 Ga0081539_10004420
329 Ga0070717_11307287
330 Ga0097621_100244696
331 Ga0097621_100555136
332 Ga0097621_101940710
333 Ga0068871_100773228
334 Ga0075430_100019026
335 Ga0075431_100228475
336 Ga0105240_10434152
337 Ga0105245_10011604
338 Ga0105245_10085319
339 Ga0105245_11292756
340 Ga0105247_10368622
341 Ga0105241_10051892
342 Ga0105241_10572082
343 Ga0105241_11309455
344 Ga0105242_10744604
345 Ga0105242_10979558
346 Ga0105248_10438716
347 Ga0105248_10642188
348 Ga0105248_10903965
349 Ga0105248_11823255
350 Ga0105238_10944666
351 Ga0105238_11980462
352 Ga0105249_11463350
353 Ga0105239_10641766
354 Ga0105239_10827615
355 Ga0105239_12026464
356 Ga0157373_11193523
357 Ga0157371_10124743
358 Ga0157371_10324825
359 Ga0157371_10687683
360 Ga0157370_10123653
361 Ga0157370_10367889
362 Ga0157370_10394021
363 Ga0157370_11942868
364 Ga0157369_10430593
365 Ga0157369_10907424
366 Ga0157374_10680110
367 Ga0157374_10941551
368 Ga0157374_11802636
369 Ga0157374_11833153
370 Ga0157374_12598164
371 Ga0157378_11050796
372 Ga0157378_11955348
373 Ga0163162_10532242
374 Ga0163162_11280337
375 Ga0157372_10140326
376 Ga0157372_10144891
377 Ga0157372_10253463
378 Ga0157372_10272792
379 Ga0157372_10651664
380 Ga0157372_10823844
381 Ga0157372_12566463
382 Ga0157375_10959323
383 Ga0157375_11704439
384 Ga0157380_11316991
385 Ga0182008_10776402
386 Ga0157379_11984742
387 Ga0157376_10978543
388 Ga0197907_11339411
389 Ga0206356_10350827
390 Ga0206349_1982282
391 Ga0206355_1448310
392 Ga0206352_10822622
393 Ga0206352_11315332
394 Ga0206354_10468107
395 Ga0206354_11700947
396 Ga0224712_10093075
397 Ga0224712_10112794
398 Ga0224712_10129701
399 Ga0224712_10275486
400 Ga0207692_10459654
401 Ga0207680_10460309
402 Ga0207705_10293899
403 Ga0207705_10931349
404 Ga0207654_10043024
405 Ga0207654_10089987
406 Ga0207707_10190155
407 Ga0207695_10000104
408 Ga0207695_10365712
409 Ga0207695_11454867
410 Ga0207671_11478592
411 Ga0207649_10093111
412 Ga0207681_11009029
413 Ga0207694_10336071
414 Ga0207650_10123805
415 Ga0207650_10464351
416 Ga0207659_10008025
417 Ga0207659_10512395
418 Ga0207687_10270062
419 Ga0207687_10503746
420 Ga0207700_10660860
421 Ga0207700_11027062
422 Ga0207700_11749382
423 Ga0207664_10041783
424 Ga0207664_10057637
425 Ga0207664_10753138
426 Ga0207644_10047045
427 Ga0207644_10817530
428 Ga0207706_10427096
429 Ga0207686_10710413
430 Ga0207691_10270487
431 Ga0207711_10586573
432 Ga0207711_11088954
433 Ga0207711_11687403
434 Ga0207689_10784520
435 Ga0207661_10232034
436 Ga0207661_11050585
437 Ga0207661_11072114
438 Ga0207679_10123051
439 Ga0207679_10222452
440 Ga0207667_10322867
441 Ga0207667_10386289
442 Ga0207712_10125574
443 Ga0207658_10051096
444 Ga0207658_11498761
445 Ga0207658_11793579
446 Ga0207658_11929625
447 Ga0207677_10868707
448 Ga0207703_10460394
449 Ga0207678_10595052
450 Ga0207702_11146931
451 Ga0207641_10280607
452 Ga0207648_10830247
453 Ga0207676_10060491
454 Ga0207674_10002572
455 Ga0207674_10125208
456 Ga0207683_10223404
457 Ga0207683_10956255
458 Ga0207698_10722595
459 Ga0268266_10002432
460 Ga0268266_10533729
461 Ga0268264_10030907
462 Ga0268264_10742063
463 Ga0265338_10019031
464 Ga0265338_10066092
465 Ga0265324_10037306
466 Ga0265332_10068459
467 Ga0265339_10004945
468 Ga0265313_10120088
469 Ga0316576_10341043
470 Ga0307405_10829556
471 Ga0307405_11235398
472 Ga0307410_12033471
473 Ga0307406_10213563
474 Ga0307406_11625513
475 Ga0307409_100590318
476 Ga0307416_100793703
477 Ga0307416_101136586
478 Ga0307414_10721209
479 Ga0307411_10060750
480 Ga0307411_10270623
481 Ga0307415_100428032
482 Ga0373932_0343592
483 Ga0373947_0074471
484 Ga0395899_0553532
485 Ga0395900_0160440
486 Ga0395900_0542332
487 Ga0395900_0767089
488 Ga0395898_0446266
489 Ga0395905_0488420
490 Ga0451853_1175678
491 Ga0451577_0286477
492 Ga0451577_1645617
493 Ga0453684_1537410
494 Ga0453684_1876402
495 Ga0466971_0205862
496 Ga0451576_0000298
497 Ga0495592_0154192
498 Ga0495592_0240058
499 Ga0495580_0193141
500 Ga0495582_0161301
501 Ga0495605_0324925
502 Ga0495639_0145260
503 Ga0495608_0205439
504 Ga0495618_0221248
505 Ga0495628_0080242
506 Ga0495628_0248925
507 Ga0495630_0040414
508 Ga0495586_0239580
509 Ga0495667_0470369
510 Ga0495656_0055649
511 Ga0495635_0042010
512 Ga0495657_0127115
513 Ga0495613_0023442
514 Ga0495613_0981173
515 Ga0495624_0002898
516 Ga0495581_0453969
517 Ga0495674_0010967
518 Ga0495674_0338451
519 Ga0495675_0387618
520 Ga0495684_0017869
521 Ga0495684_0412632
522 Ga0495602_0737815
523 Ga0501032_0188812
524 Ga0501033_0125609
525 Ga0501034_0000512
526 Ga0501034_0001397
527 Ga0501034_0305240
528 Ga0501034_1017598
529 Ga0501037_0005923
530 Ga0501038_0000185
531 Ga0501039_0121521
532 Ga0501043_0089881
533 Ga0501043_0178302
534 Ga0501046_1179042
535 Ga0501047_0013402
536 Ga0501047_0201879
537 Ga0501048_0087238
538 Ga0501070_0543556
539 Ga0501073_0154060
540 Ga0501256_049464
541 Ga0501080_0017665
542 Ga0501080_0023262
543 Ga0501080_0088333
544 Ga0501083_0184421
545 Ga0501035_0725392
546 Ga0501044_0000355
547 Ga0501044_0028744
548 Ga0501044_0063927
549 Ga0501044_1075736
550 nmdc:mga05p37_1044572_c1
551 nmdc:mga0qj67_220484_c1
552 nmdc:mga06r32_112978_c1
553 nmdc:mga0rr50_510669_c1
554 Ga0495601_0499762
555 Ga0501084_0974007
556 Ga0587093_112484
557 Ga0587066_123583
558 Ga0587073_0022323
559 Ga0587073_0034778
560 Ga0587077_040568
561 Ga0587077_234895
562 Ga0587088_147734
563 Ga0587094_092081
564 Ga0587128_028685
565 Ga0587079_240624
566 Ga0501082_0037835

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01245

Ribosomal_L19

Ribosomal protein L19

19

129

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7asn-assembly1.cif.gz_N staphylococcus aureus 50s after 30 minutes incubation a 37c 0.8279 5 101
7p48-assembly1.cif.gz_N staphylococcus aureus ribosome in complex with sal(b) 0.8198 5 102
6sj6-assembly1.cif.gz_S cryo-em structure of 50s-rsfs complex from staphylococcus aureus 0.8184 3 102
6wu9-assembly1.cif.gz_Q 50s subunit of 70s ribosome enterococcus faecalis multibody refinement 0.8168 4 102
7oia-assembly1.cif.gz_Q cryo-em structure of late human 39s mitoribosome assembly intermediates, state 3c 0.8164 4 87
ID Description Score Start End Superfamily
af_A5WUX1_90_163_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8449 48 76 3.30.160.20
af_P9WKF7_3_423_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8347 46 78 3.50.50.60
af_P9WHC9_4_113_2.30.30.790 Mainly Beta;Roll;SH3 type barrels.; 0.8132 7 103 2.30.30.790
af_C0P2I3_122_238_2.30.30.790 Mainly Beta;Roll;SH3 type barrels.; 0.7488 2 104 2.30.30.790
af_B4FZV7_94_212_2.30.30.790 Mainly Beta;Roll;SH3 type barrels.; 0.7201 4 103 2.30.30.790
ID Description Score Start End GO Terms
AF-A0A3C0AFA4-F1-model_v4 50S ribosomal protein L19 0.9578 3 86 GO:0003735
GO:0006412
GO:0022625
AF-A0A258HDF6-F1-model_v4 50S ribosomal protein L19 0.9407 5 88 GO:0003735
GO:0006412
GO:0022625
AF-A0A662F966-F1-model_v4 deleted 0.9311 15 88
AF-A0A383C2L1-F1-model_v4 50S ribosomal protein L19 0.9304 5 89 GO:0003735
GO:0006412
GO:0022625
AF-A0A496TPK9-F1-model_v4 50S ribosomal protein L19 0.9268 6 88 GO:0003735
GO:0006412
GO:0022625

Map