F385660

General Info

Members Datasets Scaffolds Average Seq Length
283 183 566 258

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10046215|Ga0307513_100462152
Length 279
Sequence LSDFNPARHRFGHRFVIFARKRFGQHFLHDRSVLDRIVREIAPTATQALLEIGPGRGALTERLIGLPRTLDAIEIDRDLAEQLRARWGAPQSFELHVADALEFDFAALARMRGDRLRVIGNLPYNISTPLLFHVAAAHEHIDDLHVMLQKEVIERIAAAPGSESYGRLTVMLAPWFEAKHLFDVGPGAFTPAPRVWSAVARLTVRREPAFVVPPAFARTVSAAFSQRRKTLRNGLRSLLGAEGFGAADIDPSRRPETLSPAEFARLAAQVPEDPSSRPS

Samples

Sample ID Description Type Environment
1 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
110 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
111 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
112 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
113 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
121 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
122 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
123 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
126 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
127 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
135 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
139 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
140 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
143 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
148 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
149 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
157 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
158 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
168 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
179 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
180 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.06
Nodule 0
Rhizoplane 1.06
Rhizosphere 94.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307513_10046215 3300031456 Bacteria 4750
2 rootL2_10027353 3300003322 Bacteria 3284
3 Ga0070658_10102569 3300005327 Bacteria 2366
4 Ga0070658_10477156 3300005327 Bacteria 1076
5 Ga0070690_100028572 3300005330 Bacteria 3455
6 Ga0070670_100168110 3300005331 Bacteria 1902
7 Ga0070677_10026096 3300005333 Bacteria 2188
8 Ga0068869_100165201 3300005334 Bacteria 1726
9 Ga0068869_100185258 3300005334 Bacteria 1634
10 Ga0070680_100025247 3300005336 Bacteria 4748
11 Ga0070680_100050550 3300005336 Bacteria 3391
12 Ga0070680_100321241 3300005336 Bacteria 1314
13 Ga0070682_100017839 3300005337 Bacteria 4141
14 Ga0070682_100041944 3300005337 Bacteria 2823
15 Ga0070689_100005078 3300005340 Bacteria 8955
16 Ga0070661_100052962 3300005344 Bacteria 2969
17 Ga0070661_100404130 3300005344 Bacteria 1080
18 Ga0070692_10344393 3300005345 Bacteria 924
19 Ga0070668_100160730 3300005347 Bacteria 1823
20 Ga0070668_100487874 3300005347 Bacteria 1065
21 Ga0070668_100500282 3300005347 Bacteria 1052
22 Ga0070675_100044905 3300005354 Bacteria 3614
23 Ga0070675_100350096 3300005354 Bacteria 1310
24 Ga0070674_100023256 3300005356 Bacteria 4009
25 Ga0070674_100228902 3300005356 Bacteria 1450
26 Ga0070674_100383895 3300005356 Bacteria 1143
27 Ga0070673_100030846 3300005364 Bacteria 4018
28 Ga0070673_100111354 3300005364 Bacteria 2271
29 Ga0070673_100218803 3300005364 Bacteria 1647
30 Ga0070688_100032825 3300005365 Bacteria 3134
31 Ga0070688_100060338 3300005365 Bacteria 2395
32 Ga0070688_100252290 3300005365 Bacteria 1257
33 Ga0070659_100049936 3300005366 Bacteria 3290
34 Ga0070659_100360130 3300005366 Bacteria 1222
35 Ga0070667_100182650 3300005367 Bacteria 1855
36 Ga0070701_10006898 3300005438 Bacteria 4810
37 Ga0070701_10154630 3300005438 Bacteria 1324
38 Ga0070711_100182363 3300005439 Bacteria 1608
39 Ga0070705_100008362 3300005440 Bacteria 5124
40 Ga0070700_100322323 3300005441 Bacteria 1136
41 Ga0070694_100042599 3300005444 Bacteria 3033
42 Ga0070662_100483693 3300005457 Bacteria 1031
43 Ga0070681_10001429 3300005458 Bacteria 21006
44 Ga0070681_10002655 3300005458 Bacteria 16419
45 Ga0070681_10005247 3300005458 Bacteria 12518
46 Ga0070681_10012498 3300005458 Bacteria 8425
47 Ga0068867_100539307 3300005459 Bacteria 1009
48 Ga0070685_10058038 3300005466 Bacteria 2255
49 Ga0070685_10110584 3300005466 Bacteria 1692
50 Ga0070685_10188097 3300005466 Bacteria 1334
51 Ga0070679_100052759 3300005530 Bacteria 4048
52 Ga0070679_100197620 3300005530 Bacteria 1978
53 Ga0070697_100111365 3300005536 Bacteria 2282
54 Ga0068853_100001374 3300005539 Bacteria 17558
55 Ga0070672_100012327 3300005543 Bacteria 5997
56 Ga0070672_100131303 3300005543 Bacteria 2059
57 Ga0070672_100290154 3300005543 Bacteria 1385
58 Ga0070686_100025129 3300005544 Bacteria 3580
59 Ga0070686_100119600 3300005544 Bacteria 1807
60 Ga0070695_100001403 3300005545 Bacteria 13343
61 Ga0070665_100024709 3300005548 Bacteria 6053
62 Ga0068855_100004909 3300005563 Bacteria 16325
63 Ga0070664_100106491 3300005564 Bacteria 2443
64 Ga0068857_100013715 3300005577 Bacteria 7063
65 Ga0068857_100107346 3300005577 Bacteria 2508
66 Ga0068856_100471574 3300005614 Bacteria 1276
67 Ga0070702_100006442 3300005615 Bacteria 5555
68 Ga0068859_100008482 3300005617 Bacteria 10398
69 Ga0068859_100128768 3300005617 Bacteria 2602
70 Ga0068859_100543191 3300005617 Bacteria 1257
71 Ga0068864_100116313 3300005618 Bacteria 2386
72 Ga0068864_100549818 3300005618 Bacteria 1116
73 Ga0068861_100000972 3300005719 Bacteria 17468
74 Ga0068861_100008278 3300005719 Bacteria 7153
75 Ga0068861_100038168 3300005719 Bacteria 3574
76 Ga0068861_100085272 3300005719 Bacteria 2480
77 Ga0068870_10006631 3300005840 Bacteria 5111
78 Ga0068870_10232158 3300005840 Bacteria 1135
79 Ga0068863_100027992 3300005841 Bacteria 5380
80 Ga0068863_100530196 3300005841 Bacteria 1161
81 Ga0068858_100116744 3300005842 Bacteria 2494
82 Ga0068860_100115206 3300005843 Bacteria 2570
83 Ga0068860_100446148 3300005843 Bacteria 1286
84 Ga0068862_100192669 3300005844 Bacteria 1835
85 Ga0068862_100338219 3300005844 Bacteria 1393
86 Ga0081455_10002219 3300005937 Bacteria 23127
87 Ga0070716_100032690 3300006173 Bacteria 2840
88 Ga0097621_100503062 3300006237 Bacteria 1098
89 Ga0068871_100148417 3300006358 Bacteria 1998
90 Ga0075428_100142464 3300006844 Bacteria 2606
91 Ga0075431_100096946 3300006847 Bacteria 3045
92 Ga0075433_10028132 3300006852 Bacteria 4777
93 Ga0068865_100051098 3300006881 Bacteria 2859
94 Ga0075436_100045542 3300006914 Bacteria 3026
95 Ga0097620_100008482 3300006931 Bacteria 10398
96 Ga0097620_100128783 3300006931 Bacteria 2602
97 Ga0097620_100543142 3300006931 Bacteria 1257
98 Ga0099794_10080517 3300007265 Bacteria 1606
99 Ga0099795_10010089 3300007788 Bacteria 2768
100 Ga0105240_10000960 3300009093 Bacteria 51436
101 Ga0105240_10007646 3300009093 Bacteria 15653
102 Ga0105240_11149701 3300009093 Bacteria 824
103 Ga0111539_10546654 3300009094 Bacteria 1349
104 Ga0111539_10596575 3300009094 Bacteria 1286
105 Ga0105241_10004571 3300009174 Bacteria 10239
106 Ga0105242_10105902 3300009176 Bacteria 2389
107 Ga0105238_10058314 3300009551 Bacteria 3870
108 Ga0105238_10073254 3300009551 Bacteria 3420
109 Ga0099796_10000234 3300010159 Bacteria 8666
110 Ga0099796_10007639 3300010159 Bacteria 2837
111 Ga0105239_10102514 3300010375 Bacteria 3167
112 Ga0157370_10001514 3300013104 Bacteria 28723
113 Ga0157370_10416858 3300013104 Bacteria 1236
114 Ga0157369_10073795 3300013105 Bacteria 3660
115 Ga0163162_10389988 3300013306 Bacteria 1525
116 Ga0157375_10013899 3300013308 Bacteria 7178
117 Ga0163163_10092727 3300014325 Bacteria 3036
118 Ga0157380_10040177 3300014326 Bacteria 3642
119 Ga0157380_10248974 3300014326 Bacteria 1607
120 Ga0157380_10582636 3300014326 Bacteria 1103
121 Ga0207699_10013467 3300025906 Bacteria 4188
122 Ga0207645_10042907 3300025907 Bacteria 2894
123 Ga0207654_10081916 3300025911 Bacteria 1945
124 Ga0207707_10000165 3300025912 Bacteria 69371
125 Ga0207707_10014825 3300025912 Bacteria 6789
126 Ga0207707_10042352 3300025912 Bacteria 3974
127 Ga0207707_10213371 3300025912 Bacteria 1681
128 Ga0207695_10026014 3300025913 Bacteria 6538
129 Ga0207695_10027829 3300025913 Bacteria 6286
130 Ga0207660_10010993 3300025917 Bacteria 5885
131 Ga0207660_10011633 3300025917 Bacteria 5738
132 Ga0207662_10076150 3300025918 Bacteria 2039
133 Ga0207652_10044267 3300025921 Bacteria 3792
134 Ga0207681_10075231 3300025923 Bacteria 2368
135 Ga0207694_10016628 3300025924 Bacteria 5558
136 Ga0207694_10047163 3300025924 Bacteria 3332
137 Ga0207650_10058425 3300025925 Bacteria 2872
138 Ga0207659_10014528 3300025926 Bacteria 5081
139 Ga0207659_10089768 3300025926 Bacteria 2292
140 Ga0207690_10156174 3300025932 Bacteria 1696
141 Ga0207686_10073287 3300025934 Bacteria 2209
142 Ga0207670_10050173 3300025936 Bacteria 2795
143 Ga0207669_10020361 3300025937 Bacteria 3478
144 Ga0207669_10285569 3300025937 Bacteria 1247
145 Ga0207704_10035448 3300025938 Bacteria 2859
146 Ga0207665_10000689 3300025939 Bacteria 22862
147 Ga0207665_10109910 3300025939 Bacteria 1936
148 Ga0207691_10000649 3300025940 Bacteria 34369
149 Ga0207691_10005267 3300025940 Bacteria 12486
150 Ga0207691_10015392 3300025940 Bacteria 7277
151 Ga0207691_10104628 3300025940 Bacteria 2522
152 Ga0207691_10235191 3300025940 Bacteria 1585
153 Ga0207691_10434439 3300025940 Bacteria 1118
154 Ga0207689_10006076 3300025942 Bacteria 10679
155 Ga0207689_10118967 3300025942 Bacteria 2173
156 Ga0207689_10163142 3300025942 Bacteria 1836
157 Ga0207679_10350766 3300025945 Bacteria 1286
158 Ga0207651_10024941 3300025960 Bacteria 3708
159 Ga0207639_10036732 3300026041 Bacteria 3633
160 Ga0207708_10068785 3300026075 Bacteria 2710
161 Ga0207702_10449583 3300026078 Bacteria 1250
162 Ga0207641_10062735 3300026088 Bacteria 3173
163 Ga0207641_10183400 3300026088 Bacteria 1918
164 Ga0207641_10198872 3300026088 Bacteria 1847
165 Ga0207641_10320219 3300026088 Bacteria 1470
166 Ga0207641_10334916 3300026088 Bacteria 1438
167 Ga0207641_11019895 3300026088 Bacteria 825
168 Ga0207648_10136106 3300026089 Bacteria 2164
169 Ga0207648_10185253 3300026089 Bacteria 1844
170 Ga0207648_10271695 3300026089 Bacteria 1514
171 Ga0207676_10096384 3300026095 Bacteria 2442
172 Ga0207676_10121037 3300026095 Bacteria 2207
173 Ga0207676_10451278 3300026095 Bacteria 1212
174 Ga0207674_10022840 3300026116 Bacteria 6712
175 Ga0207674_10198125 3300026116 Bacteria 1958
176 Ga0207675_100004813 3300026118 Bacteria 13002
177 Ga0207675_100012998 3300026118 Bacteria 7771
178 Ga0207675_100016855 3300026118 Bacteria 6824
179 Ga0207675_100033802 3300026118 Bacteria 4765
180 Ga0207675_100238633 3300026118 Bacteria 1756
181 Ga0207675_100544923 3300026118 Bacteria 1159
182 Ga0207675_100560879 3300026118 Bacteria 1142
183 Ga0207683_10002330 3300026121 Bacteria 16662
184 Ga0207683_10059387 3300026121 Bacteria 3359
185 Ga0207683_10211207 3300026121 Bacteria 1767
186 Ga0209588_1004727 3300027671 Bacteria 3861
187 Ga0268266_10039252 3300028379 Bacteria 4032
188 Ga0268265_10553568 3300028380 Bacteria 1092
189 Ga0268264_10047590 3300028381 Bacteria 3565
190 Ga0307511_10001554 3300030521 Bacteria 24331
191 Ga0307513_10025617 3300031456 Bacteria 6827
192 Ga0307513_10054279 3300031456 Bacteria 4298
193 Ga0307513_10056678 3300031456 Bacteria 4181
194 Ga0307513_10107549 3300031456 Bacteria 2792
195 Ga0307513_10238023 3300031456 Bacteria 1628
196 Ga0307509_10072971 3300031507 Bacteria 3575
197 Ga0316579_10074086 3300031691 Bacteria 1616
198 Ga0316576_10001860 3300031727 Bacteria 11726
199 Ga0316578_10068553 3300031728 Bacteria 2098
200 Ga0307405_10424476 3300031731 Bacteria 1047
201 Ga0307413_10007351 3300031824 Bacteria 5109
202 Ga0307407_10005935 3300031903 Bacteria 5367
203 Ga0307409_100039806 3300031995 Bacteria 3492
204 Ga0307411_10021443 3300032005 Bacteria 3781
205 Ga0307415_100173074 3300032126 Bacteria 1686
206 Ga0307415_100359459 3300032126 Bacteria 1229
207 Ga0373938_0041469 3300034957 Bacteria 1024
208 Ga0373934_0000751 3300035086 Bacteria 11609
209 Ga0373954_0000307 3300035118 Bacteria 17782
210 Ga0373960_0039000 3300035121 Bacteria 1364
211 Ga0373943_0076161 3300035170 Bacteria 1711
212 Ga0373955_0064021 3300035172 Bacteria 2037
213 Ga0373961_0015599 3300035241 Bacteria 1946
214 Ga0316574_0008600 3300035398 Bacteria 5675
215 Ga0316574_0257147 3300035398 Bacteria 1115
216 Ga0373947_0287183 3300035725 Bacteria 1095
217 Ga0373937_0560196 3300036401 Bacteria 1086
218 Ga0316584_0384511 3300036712 Bacteria 1002
219 Ga0395900_0305728 3300037418 Bacteria 1575
220 Ga0395898_0209994 3300037466 Bacteria 1857
221 Ga0395905_0005522 3300037471 Bacteria 12900
222 Ga0451807_2366807 3300041486 Bacteria 836
223 Ga0450892_004474 3300042130 Bacteria 1145
224 Ga0451577_0183261 3300042876 Bacteria 1888
225 Ga0495603_0072324 3300046455 Bacteria 2026
226 Ga0495641_0173503 3300046461 Bacteria 965
227 Ga0495643_0043672 3300046522 Bacteria 2438
228 Ga0495644_0014690 3300046523 Bacteria 2999
229 Ga0495642_0002071 3300046528 Bacteria 8312
230 Ga0495642_0108168 3300046528 Bacteria 1187
231 Ga0495587_0258236 3300046536 Bacteria 979
232 Ga0495621_0004211 3300046539 Bacteria 4019
233 Ga0495621_0118338 3300046539 Bacteria 1022
234 Ga0495633_0112068 3300046558 Bacteria 1265
235 Ga0495656_0236124 3300046615 Bacteria 919
236 Ga0495625_0009758 3300046660 Bacteria 7989
237 Ga0495625_0161794 3300046660 Bacteria 1499
238 Ga0495661_0013325 3300046665 Bacteria 5527
239 Ga0495588_0137054 3300046674 Bacteria 1292
240 Ga0495647_0000854 3300046681 Bacteria 9129
241 Ga0495658_0134054 3300046683 Bacteria 1510
242 Ga0495649_0003912 3300046694 Bacteria 9848
243 Ga0495604_0116578 3300047317 Bacteria 1938
244 Ga0495636_0022527 3300047318 Bacteria 2547
245 Ga0495687_019235 3300047443 Bacteria 3357
246 Ga0495687_039543 3300047443 Bacteria 2085
247 Ga0495686_0103531 3300047472 Bacteria 1715
248 Ga0495615_0063727 3300048090 Bacteria 979
249 Ga0495626_0064612 3300048091 Bacteria 1658
250 Ga0496110_0146692 3300048913 Bacteria 2135
251 Ga0496114_0012123 3300048917 Bacteria 6898
252 Ga0501033_0175626 3300049570 Bacteria 1537
253 Ga0501034_0008329 3300049571 Bacteria 10970
254 Ga0501037_0141431 3300049573 Bacteria 1722
255 Ga0501038_0277967 3300049574 Bacteria 1319
256 Ga0501039_0009630 3300049575 Bacteria 7365
257 Ga0501040_0162385 3300049576 Bacteria 1580
258 Ga0501067_0012272 3300049583 Bacteria 4750
259 Ga0501067_0057584 3300049583 Bacteria 2152
260 Ga0501068_0002235 3300049584 Bacteria 10302
261 Ga0501069_0051379 3300049585 Bacteria 2294
262 Ga0501072_0006441 3300049588 Bacteria 8939
263 Ga0501072_0039848 3300049588 Bacteria 3688
264 Ga0501072_0059180 3300049588 Bacteria 3021
265 Ga0501073_0002210 3300049589 Bacteria 14541
266 Ga0501073_0086522 3300049589 Bacteria 2180
267 Ga0501074_0002830 3300049590 Bacteria 12147
268 Ga0501075_0064621 3300049591 Bacteria 2760
269 Ga0501076_0094154 3300049592 Bacteria 2412
270 Ga0501077_0002327 3300049593 Bacteria 11442
271 Ga0501079_0004905 3300049741 Bacteria 9918
272 Ga0501080_0004206 3300049742 Bacteria 12773
273 Ga0501080_0015030 3300049742 Bacteria 7130
274 nmdc:mga08y16_208670_c1 3300050511 Bacteria 2023
275 Ga0495595_0170609 3300053084 Bacteria 1077
276 Ga0500556_0000435 3300053104 Bacteria 29836
277 Ga0500637_0027480 3300053178 Bacteria 3142
278 Ga0500637_0090616 3300053178 Bacteria 1770
279 Ga0501084_0000743 3300054114 Bacteria 24834
280 Ga0501084_0165853 3300054114 Bacteria 1864
281 Ga0501082_0049085 3300060353 Bacteria 3639
282 Ga0530510_0109595 3300061734 Bacteria 2022
283 Ga0530510_0309619 3300061734 Bacteria 1183
284 Ga0307513_10046215
285 rootL2_10027353
286 Ga0070658_10102569
287 Ga0070658_10477156
288 Ga0070690_100028572
289 Ga0070670_100168110
290 Ga0070677_10026096
291 Ga0068869_100165201
292 Ga0068869_100185258
293 Ga0070680_100025247
294 Ga0070680_100050550
295 Ga0070680_100321241
296 Ga0070682_100017839
297 Ga0070682_100041944
298 Ga0070689_100005078
299 Ga0070661_100052962
300 Ga0070661_100404130
301 Ga0070692_10344393
302 Ga0070668_100160730
303 Ga0070668_100487874
304 Ga0070668_100500282
305 Ga0070675_100044905
306 Ga0070675_100350096
307 Ga0070674_100023256
308 Ga0070674_100228902
309 Ga0070674_100383895
310 Ga0070673_100030846
311 Ga0070673_100111354
312 Ga0070673_100218803
313 Ga0070688_100032825
314 Ga0070688_100060338
315 Ga0070688_100252290
316 Ga0070659_100049936
317 Ga0070659_100360130
318 Ga0070667_100182650
319 Ga0070701_10006898
320 Ga0070701_10154630
321 Ga0070711_100182363
322 Ga0070705_100008362
323 Ga0070700_100322323
324 Ga0070694_100042599
325 Ga0070662_100483693
326 Ga0070681_10001429
327 Ga0070681_10002655
328 Ga0070681_10005247
329 Ga0070681_10012498
330 Ga0068867_100539307
331 Ga0070685_10058038
332 Ga0070685_10110584
333 Ga0070685_10188097
334 Ga0070679_100052759
335 Ga0070679_100197620
336 Ga0070697_100111365
337 Ga0068853_100001374
338 Ga0070672_100012327
339 Ga0070672_100131303
340 Ga0070672_100290154
341 Ga0070686_100025129
342 Ga0070686_100119600
343 Ga0070695_100001403
344 Ga0070665_100024709
345 Ga0068855_100004909
346 Ga0070664_100106491
347 Ga0068857_100013715
348 Ga0068857_100107346
349 Ga0068856_100471574
350 Ga0070702_100006442
351 Ga0068859_100008482
352 Ga0068859_100128768
353 Ga0068859_100543191
354 Ga0068864_100116313
355 Ga0068864_100549818
356 Ga0068861_100000972
357 Ga0068861_100008278
358 Ga0068861_100038168
359 Ga0068861_100085272
360 Ga0068870_10006631
361 Ga0068870_10232158
362 Ga0068863_100027992
363 Ga0068863_100530196
364 Ga0068858_100116744
365 Ga0068860_100115206
366 Ga0068860_100446148
367 Ga0068862_100192669
368 Ga0068862_100338219
369 Ga0081455_10002219
370 Ga0070716_100032690
371 Ga0097621_100503062
372 Ga0068871_100148417
373 Ga0075428_100142464
374 Ga0075431_100096946
375 Ga0075433_10028132
376 Ga0068865_100051098
377 Ga0075436_100045542
378 Ga0097620_100008482
379 Ga0097620_100128783
380 Ga0097620_100543142
381 Ga0099794_10080517
382 Ga0099795_10010089
383 Ga0105240_10000960
384 Ga0105240_10007646
385 Ga0105240_11149701
386 Ga0111539_10546654
387 Ga0111539_10596575
388 Ga0105241_10004571
389 Ga0105242_10105902
390 Ga0105238_10058314
391 Ga0105238_10073254
392 Ga0099796_10000234
393 Ga0099796_10007639
394 Ga0105239_10102514
395 Ga0157370_10001514
396 Ga0157370_10416858
397 Ga0157369_10073795
398 Ga0163162_10389988
399 Ga0157375_10013899
400 Ga0163163_10092727
401 Ga0157380_10040177
402 Ga0157380_10248974
403 Ga0157380_10582636
404 Ga0207699_10013467
405 Ga0207645_10042907
406 Ga0207654_10081916
407 Ga0207707_10000165
408 Ga0207707_10014825
409 Ga0207707_10042352
410 Ga0207707_10213371
411 Ga0207695_10026014
412 Ga0207695_10027829
413 Ga0207660_10010993
414 Ga0207660_10011633
415 Ga0207662_10076150
416 Ga0207652_10044267
417 Ga0207681_10075231
418 Ga0207694_10016628
419 Ga0207694_10047163
420 Ga0207650_10058425
421 Ga0207659_10014528
422 Ga0207659_10089768
423 Ga0207690_10156174
424 Ga0207686_10073287
425 Ga0207670_10050173
426 Ga0207669_10020361
427 Ga0207669_10285569
428 Ga0207704_10035448
429 Ga0207665_10000689
430 Ga0207665_10109910
431 Ga0207691_10000649
432 Ga0207691_10005267
433 Ga0207691_10015392
434 Ga0207691_10104628
435 Ga0207691_10235191
436 Ga0207691_10434439
437 Ga0207689_10006076
438 Ga0207689_10118967
439 Ga0207689_10163142
440 Ga0207679_10350766
441 Ga0207651_10024941
442 Ga0207639_10036732
443 Ga0207708_10068785
444 Ga0207702_10449583
445 Ga0207641_10062735
446 Ga0207641_10183400
447 Ga0207641_10198872
448 Ga0207641_10320219
449 Ga0207641_10334916
450 Ga0207641_11019895
451 Ga0207648_10136106
452 Ga0207648_10185253
453 Ga0207648_10271695
454 Ga0207676_10096384
455 Ga0207676_10121037
456 Ga0207676_10451278
457 Ga0207674_10022840
458 Ga0207674_10198125
459 Ga0207675_100004813
460 Ga0207675_100012998
461 Ga0207675_100016855
462 Ga0207675_100033802
463 Ga0207675_100238633
464 Ga0207675_100544923
465 Ga0207675_100560879
466 Ga0207683_10002330
467 Ga0207683_10059387
468 Ga0207683_10211207
469 Ga0209588_1004727
470 Ga0268266_10039252
471 Ga0268265_10553568
472 Ga0268264_10047590
473 Ga0307511_10001554
474 Ga0307513_10025617
475 Ga0307513_10054279
476 Ga0307513_10056678
477 Ga0307513_10107549
478 Ga0307513_10238023
479 Ga0307509_10072971
480 Ga0316579_10074086
481 Ga0316576_10001860
482 Ga0316578_10068553
483 Ga0307405_10424476
484 Ga0307413_10007351
485 Ga0307407_10005935
486 Ga0307409_100039806
487 Ga0307411_10021443
488 Ga0307415_100173074
489 Ga0307415_100359459
490 Ga0373938_0041469
491 Ga0373934_0000751
492 Ga0373954_0000307
493 Ga0373960_0039000
494 Ga0373943_0076161
495 Ga0373955_0064021
496 Ga0373961_0015599
497 Ga0316574_0008600
498 Ga0316574_0257147
499 Ga0373947_0287183
500 Ga0373937_0560196
501 Ga0316584_0384511
502 Ga0395900_0305728
503 Ga0395898_0209994
504 Ga0395905_0005522
505 Ga0451807_2366807
506 Ga0450892_004474
507 Ga0451577_0183261
508 Ga0495603_0072324
509 Ga0495641_0173503
510 Ga0495643_0043672
511 Ga0495644_0014690
512 Ga0495642_0002071
513 Ga0495642_0108168
514 Ga0495587_0258236
515 Ga0495621_0004211
516 Ga0495621_0118338
517 Ga0495633_0112068
518 Ga0495656_0236124
519 Ga0495625_0009758
520 Ga0495625_0161794
521 Ga0495661_0013325
522 Ga0495588_0137054
523 Ga0495647_0000854
524 Ga0495658_0134054
525 Ga0495649_0003912
526 Ga0495604_0116578
527 Ga0495636_0022527
528 Ga0495687_019235
529 Ga0495687_039543
530 Ga0495686_0103531
531 Ga0495615_0063727
532 Ga0495626_0064612
533 Ga0496110_0146692
534 Ga0496114_0012123
535 Ga0501033_0175626
536 Ga0501034_0008329
537 Ga0501037_0141431
538 Ga0501038_0277967
539 Ga0501039_0009630
540 Ga0501040_0162385
541 Ga0501067_0012272
542 Ga0501067_0057584
543 Ga0501068_0002235
544 Ga0501069_0051379
545 Ga0501072_0006441
546 Ga0501072_0039848
547 Ga0501072_0059180
548 Ga0501073_0002210
549 Ga0501073_0086522
550 Ga0501074_0002830
551 Ga0501075_0064621
552 Ga0501076_0094154
553 Ga0501077_0002327
554 Ga0501079_0004905
555 Ga0501080_0004206
556 Ga0501080_0015030
557 nmdc:mga08y16_208670_c1
558 Ga0495595_0170609
559 Ga0500556_0000435
560 Ga0500637_0027480
561 Ga0500637_0090616
562 Ga0501084_0000743
563 Ga0501084_0165853
564 Ga0501082_0049085
565 Ga0530510_0109595
566 Ga0530510_0309619

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00398

RrnaAD

Ribosomal RNA adenine dimethylase

17

270

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o5h-assembly1.cif.gz_V ribosomal methyltransferase ksga bound to small ribosomal subunit 0.957 12 252
3tpz-assembly1.cif.gz_A 2.1 angstrom crystal structure of the l114p mutant of e. coli ksga 0.9539 8 252
6ifs-assembly2.cif.gz_B ksga from bacillus subtilis 168 0.949 12 252
3tqs-assembly2.cif.gz_B structure of the dimethyladenosine transferase (ksga) from coxiella burnetii 0.9465 10 253
3tqs-assembly2.cif.gz_B structure of the dimethyladenosine transferase (ksga) from coxiella burnetii 0.9317 10 253
ID Description Score Start End Superfamily
af_A0A144A0V8_364_547_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9523 33 191 3.40.50.150
1qyrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9468 10 192 3.40.50.150
6ifwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9432 12 194 3.40.50.150
1qyrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.937 10 192 3.40.50.150
3fteA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9257 17 190 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A534BXF1-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA (EC 2.1.1.182) 0.9807 23 254 GO:0003723
GO:0005829
GO:0052908
AF-A0A3D5Q6L7-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase 0.9656 106 191 GO:0000179
GO:0003723
GO:0005829
AF-A0A7W1R9P9-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) 0.965 9 183 GO:0003723
GO:0005829
GO:0052908
AF-A0A661ICI8-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) 0.9629 36 253 GO:0003723
GO:0005829
GO:0052908
AF-Q493R7-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) 0.9609 10 253 GO:0003723
GO:0005829
GO:0052908

Map