F385656

General Info

Members Datasets Scaffolds Average Seq Length
283 150 566 629

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10010516|Ga0265320_100105162
Length 680
Sequence VPVFAARNLLNDRDGATGTVLAHAARTHMLAAMPLDPVIRDSSDPLERALAALGYAQFRPGQREAIETLLRVGRLLLVAPTGGGKSLAYQLPATLLPGTTLVISPLIALMHDQVRALTERGVAATFIASTLDSDEVRRRMAKVAAREMRLVYVSPERLTFPGFRALLCELAPTLVAVDEAHCISEWGHDFRPEYGQIGELLTALPPTRVLACTATATPVVRDEILSRLGLDSATPQLVQGFARPNLVLRVAEIDARRERSRAVDAQLAEALGRPRGGFGPSRGTALVYSPTRRAAEEESVRLSRAGWRARFYHAGIDGAEREAVHRAFAEGELEVVVATNAFGMGIDRPDVRAVIHLAPPSSIEAYYQEVGRAGRDGATAFGLLLVSPGDVPMRRRILEQPGDGRTIDPAVLAHKWNLFLELMRWAEGGSCRHDAILRYFGDEAETLDGCGRCDVCSALAGTASRVDPETVTLIVRKALSAVARVHGRFGLSAAVKLLRGEEDPRLTGAGLDRTPTFGVLREHEETWLQALLRRCVSAGWVDFTGGDRPVVMLTADGRAVMKAERPARLLLPPEGRARRATTGTPSRGAERAAQPSSGLPPADLDADSQRIFDALRAFRLATSRADGVPPYVVASDRTLRELALIKPRTIHDLELAHGIGQAKTERYGAQLLATIQAALG

Samples

Sample ID Description Type Environment
1 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.41
Nodule 0
Rhizoplane 0
Rhizosphere 97.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265320_10010516 3300031240 Bacteria 5508
2 Ga0070690_100051111 3300005330 Bacteria 2638
3 Ga0070670_100035432 3300005331 Bacteria 4296
4 Ga0068869_100000339 3300005334 Bacteria 24980
5 Ga0070680_100000427 3300005336 Bacteria 28708
6 Ga0070680_100055360 3300005336 Bacteria 3241
7 Ga0070682_100000178 3300005337 Bacteria 47679
8 Ga0068868_100076025 3300005338 Bacteria 2684
9 Ga0070689_100011127 3300005340 Bacteria 6437
10 Ga0070689_100106475 3300005340 Bacteria 2225
11 Ga0070691_10007893 3300005341 Bacteria 4867
12 Ga0070691_10027949 3300005341 Bacteria 2633
13 Ga0070687_100012105 3300005343 Bacteria 3797
14 Ga0070661_100001950 3300005344 Bacteria 14272
15 Ga0070669_100049202 3300005353 Bacteria 3077
16 Ga0070671_100005050 3300005355 Bacteria 10521
17 Ga0070659_100006052 3300005366 Bacteria 8727
18 Ga0070703_10014011 3300005406 Bacteria 2280
19 Ga0070705_100000165 3300005440 Bacteria 38351
20 Ga0070705_100019067 3300005440 Bacteria 3606
21 Ga0070705_100049137 3300005440 Bacteria 2447
22 Ga0070694_100000730 3300005444 Bacteria 18341
23 Ga0070694_100062242 3300005444 Bacteria 2549
24 Ga0070708_100008907 3300005445 Bacteria 8079
25 Ga0070678_100079840 3300005456 Bacteria 2476
26 Ga0068867_100054598 3300005459 Bacteria 2951
27 Ga0070706_100005353 3300005467 Bacteria 12232
28 Ga0070706_100005577 3300005467 Bacteria 11973
29 Ga0070706_100026951 3300005467 Bacteria 5289
30 Ga0070706_100066686 3300005467 Bacteria 3329
31 Ga0070707_100003359 3300005468 Bacteria 15109
32 Ga0070707_100048362 3300005468 Bacteria 4074
33 Ga0070707_100060440 3300005468 Bacteria 3634
34 Ga0070698_100000270 3300005471 Bacteria 52642
35 Ga0070698_100004124 3300005471 Bacteria 15973
36 Ga0070698_100005919 3300005471 Bacteria 13339
37 Ga0070698_100014690 3300005471 Bacteria 8270
38 Ga0070698_100022904 3300005471 Bacteria 6531
39 Ga0070698_100023379 3300005471 Bacteria 6461
40 Ga0070698_100081945 3300005471 Bacteria 3219
41 Ga0070698_100105576 3300005471 Bacteria 2786
42 Ga0070699_100004525 3300005518 Bacteria 12306
43 Ga0070699_100013019 3300005518 Bacteria 7167
44 Ga0070699_100015549 3300005518 Bacteria 6540
45 Ga0070699_100093559 3300005518 Bacteria 2630
46 Ga0070697_100001059 3300005536 Bacteria 20805
47 Ga0070697_100048120 3300005536 Bacteria 3458
48 Ga0070697_100071476 3300005536 Bacteria 2846
49 Ga0068853_100006399 3300005539 Bacteria 9356
50 Ga0070686_100034727 3300005544 Bacteria 3110
51 Ga0070695_100002980 3300005545 Bacteria 9864
52 Ga0070696_100001876 3300005546 Bacteria 13790
53 Ga0070696_100017788 3300005546 Bacteria 4799
54 Ga0070693_100000015 3300005547 Bacteria 64460
55 Ga0070704_100055302 3300005549 Bacteria 2813
56 Ga0068857_100018648 3300005577 Bacteria 6090
57 Ga0068856_100048988 3300005614 Bacteria 4164
58 Ga0068859_100000314 3300005617 Bacteria 48449
59 Ga0068859_100100619 3300005617 Bacteria 2946
60 Ga0068864_100116247 3300005618 Bacteria 2386
61 Ga0068866_10036314 3300005718 Bacteria 2413
62 Ga0068861_100004073 3300005719 Bacteria 9793
63 Ga0068861_100057453 3300005719 Bacteria 2972
64 Ga0068861_100062554 3300005719 Bacteria 2860
65 Ga0068861_100115152 3300005719 Bacteria 2160
66 Ga0068870_10001022 3300005840 Bacteria 11068
67 Ga0068863_100115078 3300005841 Bacteria 2562
68 Ga0068858_100047115 3300005842 Bacteria 3997
69 Ga0068860_100003925 3300005843 Bacteria 15277
70 Ga0068862_100011929 3300005844 Bacteria 7180
71 Ga0068862_100038094 3300005844 Bacteria 4077
72 Ga0068862_100103984 3300005844 Bacteria 2487
73 Ga0081455_10000526 3300005937 Bacteria 49583
74 Ga0081455_10007070 3300005937 Bacteria 11912
75 Ga0081540_1025683 3300005983 Bacteria 3383
76 Ga0075365_10059771 3300006038 Bacteria 2541
77 Ga0070712_100042521 3300006175 Bacteria 3125
78 Ga0075367_10002958 3300006178 Bacteria 7940
79 Ga0075366_10001469 3300006195 Bacteria 11754
80 Ga0075428_100015579 3300006844 Bacteria 8428
81 Ga0075428_100017921 3300006844 Bacteria 7825
82 Ga0075428_100023867 3300006844 Bacteria 6768
83 Ga0075428_100058331 3300006844 Bacteria 4226
84 Ga0075428_100105327 3300006844 Bacteria 3076
85 Ga0075428_100131174 3300006844 Bacteria 2726
86 Ga0075430_100067864 3300006846 Bacteria 2993
87 Ga0075431_100001874 3300006847 Bacteria 19915
88 Ga0075431_100035905 3300006847 Bacteria 5104
89 Ga0075433_10004521 3300006852 Bacteria 10844
90 Ga0075433_10017947 3300006852 Bacteria 5871
91 Ga0075433_10018771 3300006852 Bacteria 5754
92 Ga0075433_10027873 3300006852 Bacteria 4797
93 Ga0075433_10046513 3300006852 Bacteria 3774
94 Ga0075434_100001305 3300006871 Bacteria 20812
95 Ga0075434_100014185 3300006871 Bacteria 7613
96 Ga0075434_100017785 3300006871 Bacteria 6856
97 Ga0075434_100018601 3300006871 Bacteria 6713
98 Ga0075434_100050786 3300006871 Bacteria 4120
99 Ga0075434_100111366 3300006871 Bacteria 2748
100 Ga0075429_100017588 3300006880 Bacteria 6181
101 Ga0075429_100077778 3300006880 Bacteria 2891
102 Ga0068865_100085002 3300006881 Bacteria 2281
103 Ga0097620_100000314 3300006931 Bacteria 48449
104 Ga0097620_100100617 3300006931 Bacteria 2946
105 Ga0075435_100012288 3300007076 Bacteria 6333
106 Ga0075435_100013093 3300007076 Bacteria 6160
107 Ga0075435_100020480 3300007076 Bacteria 5069
108 Ga0075435_100066504 3300007076 Bacteria 2933
109 Ga0099794_10013543 3300007265 Bacteria 3552
110 Ga0111539_10000760 3300009094 Bacteria 41980
111 Ga0111539_10002390 3300009094 Bacteria 24932
112 Ga0111539_10013287 3300009094 Bacteria 10288
113 Ga0111539_10014730 3300009094 Bacteria 9754
114 Ga0111539_10055665 3300009094 Bacteria 4702
115 Ga0111539_10089974 3300009094 Bacteria 3607
116 Ga0105247_10013399 3300009101 Bacteria 4917
117 Ga0114129_10004059 3300009147 Bacteria 20667
118 Ga0114129_10005727 3300009147 Bacteria 17603
119 Ga0114129_10008784 3300009147 Bacteria 14412
120 Ga0114129_10043604 3300009147 Bacteria 6311
121 Ga0114129_10141681 3300009147 Bacteria 3295
122 Ga0105243_10068726 3300009148 Bacteria 2856
123 Ga0105243_10125276 3300009148 Bacteria 2172
124 Ga0105248_10001873 3300009177 Bacteria 23327
125 Ga0105248_10028366 3300009177 Bacteria 6236
126 Ga0157372_10002774 3300013307 Bacteria 18925
127 Ga0157380_10031600 3300014326 Bacteria 4065
128 Ga0207653_10001224 3300025885 Bacteria 8395
129 Ga0207645_10000059 3300025907 Bacteria 78254
130 Ga0207643_10000014 3300025908 Bacteria 128891
131 Ga0207684_10002326 3300025910 Bacteria 19277
132 Ga0207684_10008250 3300025910 Bacteria 9275
133 Ga0207684_10011345 3300025910 Bacteria 7800
134 Ga0207684_10019076 3300025910 Bacteria 5867
135 Ga0207684_10030385 3300025910 Bacteria 4599
136 Ga0207684_10033329 3300025910 Bacteria 4379
137 Ga0207693_10001797 3300025915 Bacteria 18804
138 Ga0207660_10000831 3300025917 Bacteria 20365
139 Ga0207660_10040067 3300025917 Bacteria 3278
140 Ga0207662_10012381 3300025918 Bacteria 4749
141 Ga0207657_10001096 3300025919 Bacteria 28747
142 Ga0207646_10001645 3300025922 Bacteria 27312
143 Ga0207646_10026819 3300025922 Bacteria 5254
144 Ga0207646_10030017 3300025922 Bacteria 4935
145 Ga0207646_10055846 3300025922 Bacteria 3530
146 Ga0207646_10056087 3300025922 Bacteria 3522
147 Ga0207644_10004752 3300025931 Bacteria 8831
148 Ga0207690_10017662 3300025932 Bacteria 4362
149 Ga0207706_10040122 3300025933 Bacteria 4149
150 Ga0207709_10021134 3300025935 Bacteria 3681
151 Ga0207670_10050220 3300025936 Bacteria 2794
152 Ga0207669_10032634 3300025937 Bacteria 2927
153 Ga0207665_10023993 3300025939 Bacteria 4020
154 Ga0207691_10060326 3300025940 Bacteria 3446
155 Ga0207689_10000081 3300025942 Bacteria 76919
156 Ga0207689_10033958 3300025942 Bacteria 4237
157 Ga0207679_10011615 3300025945 Bacteria 5715
158 Ga0207651_10057949 3300025960 Bacteria 2675
159 Ga0207640_10083975 3300025981 Bacteria 2185
160 Ga0207703_10022301 3300026035 Bacteria 4965
161 Ga0207639_10007432 3300026041 Bacteria 7471
162 Ga0207678_10064627 3300026067 Bacteria 3144
163 Ga0207678_10069287 3300026067 Bacteria 3024
164 Ga0207708_10082635 3300026075 Bacteria 2469
165 Ga0207648_10076498 3300026089 Bacteria 2918
166 Ga0207676_10074221 3300026095 Bacteria 2740
167 Ga0207674_10012522 3300026116 Bacteria 9477
168 Ga0207674_10059801 3300026116 Bacteria 3855
169 Ga0207675_100012370 3300026118 Bacteria 7971
170 Ga0207675_100040980 3300026118 Bacteria 4326
171 Ga0207675_100043289 3300026118 Bacteria 4205
172 Ga0207675_100157349 3300026118 Bacteria 2165
173 Ga0207683_10037978 3300026121 Bacteria 4194
174 Ga0209970_1003624 3300027614 Bacteria 2588
175 Ga0209983_1000348 3300027665 Bacteria 9734
176 Ga0209971_1000088 3300027682 Bacteria 27872
177 Ga0209966_1000183 3300027695 Bacteria 25679
178 Ga0209998_10000045 3300027717 Bacteria 50544
179 Ga0207428_10000049 3300027907 Bacteria 179267
180 Ga0207428_10009526 3300027907 Bacteria 8701
181 Ga0268265_10048837 3300028380 Bacteria 3179
182 Ga0268265_10080107 3300028380 Bacteria 2574
183 Ga0316576_10050697 3300031727 Bacteria 3019
184 Ga0316584_0011969 3300036712 Bacteria 6111
185 Ga0451837_0836632 3300041494 Bacteria 3272
186 Ga0451577_0005684 3300042876 Bacteria 12658
187 Ga0451577_0024035 3300042876 Bacteria 5549
188 Ga0451577_0024663 3300042876 Bacteria 5468
189 Ga0451577_0032995 3300042876 Bacteria 4666
190 Ga0451577_0067057 3300042876 Bacteria 3200
191 Ga0451577_0087078 3300042876 Bacteria 2787
192 Ga0453684_0022941 3300044712 Bacteria 9229
193 Ga0451576_0007391 3300045051 Bacteria 13144
194 Ga0451576_0008754 3300045051 Bacteria 11842
195 Ga0451576_0024510 3300045051 Bacteria 6517
196 Ga0495638_0028511 3300046460 Bacteria 3604
197 Ga0495580_0001734 3300046472 Bacteria 19160
198 Ga0495658_0001196 3300046683 Bacteria 13667
199 Ga0495672_0001218 3300047320 Bacteria 25959
200 Ga0495676_0046025 3300047321 Bacteria 3546
201 Ga0496121_0001294 3300048924 Bacteria 43048
202 Ga0495682_0034264 3300049460 Bacteria 1873
203 Ga0501031_0077448 3300049568 Bacteria 2166
204 Ga0501040_0003229 3300049576 Bacteria 10549
205 Ga0501042_0001087 3300049578 Bacteria 15602
206 Ga0501046_0000141 3300049580 Bacteria 75571
207 Ga0501046_0021131 3300049580 Bacteria 5375
208 Ga0501046_0128866 3300049580 Bacteria 1920
209 Ga0501047_0003930 3300049581 Bacteria 13966
210 Ga0501047_0013703 3300049581 Bacteria 7697
211 Ga0501048_0019737 3300049582 Bacteria 4943
212 Ga0501067_0009010 3300049583 Bacteria 5530
213 Ga0501068_0004149 3300049584 Bacteria 7850
214 Ga0501068_0034550 3300049584 Bacteria 3015
215 Ga0501069_0020442 3300049585 Bacteria 3587
216 Ga0501071_0078420 3300049587 Bacteria 2414
217 Ga0501072_0000017 3300049588 Bacteria 161678
218 Ga0501072_0005874 3300049588 Bacteria 9347
219 Ga0501072_0016212 3300049588 Bacteria 5716
220 Ga0501074_0008231 3300049590 Bacteria 7560
221 Ga0501075_0002297 3300049591 Bacteria 12684
222 Ga0501075_0009017 3300049591 Bacteria 6962
223 Ga0501075_0019324 3300049591 Bacteria 4940
224 Ga0501075_0047342 3300049591 Bacteria 3232
225 Ga0501076_0015308 3300049592 Bacteria 5794
226 Ga0501076_0024419 3300049592 Bacteria 4672
227 Ga0501076_0043176 3300049592 Bacteria 3551
228 Ga0501077_0001452 3300049593 Bacteria 14284
229 Ga0501079_0001687 3300049741 Bacteria 15710
230 Ga0501079_0014755 3300049741 Bacteria 5956
231 Ga0501080_0009754 3300049742 Bacteria 8771
232 Ga0501080_0046323 3300049742 Bacteria 4048
233 Ga0501081_0002901 3300049743 Bacteria 10873
234 Ga0501081_0021597 3300049743 Bacteria 4297
235 Ga0501081_0033184 3300049743 Bacteria 3506
236 Ga0501083_0001624 3300049744 Bacteria 15387
237 Ga0501044_0012389 3300049823 Bacteria 9231
238 Ga0501045_0000297 3300049824 Bacteria 29162
239 Ga0501045_0049351 3300049824 Bacteria 3069
240 Ga0501045_0052285 3300049824 Bacteria 2982
241 nmdc:mga05p37_11678_c2 3300050507 Bacteria 5031
242 nmdc:mga05p37_118168_c1 3300050507 Bacteria 3258
243 nmdc:mga05p37_131584_c1 3300050507 Bacteria 3070
244 nmdc:mga05p37_29527_c1 3300050507 Bacteria 6690
245 nmdc:mga05p37_54109_c1 3300050507 Bacteria 4938
246 nmdc:mga09592_6523_c1 3300050508 Bacteria 9505
247 nmdc:mga09592_83897_c1 3300050508 Bacteria 2716
248 nmdc:mga0qj67_12062_c1 3300050509 Bacteria 6497
249 nmdc:mga0qj67_43322_c1 3300050509 Bacteria 3544
250 nmdc:mga0qj67_65683_c1 3300050509 Bacteria 2889
251 nmdc:mga06r32_20942_c1 3300050510 Bacteria 6029
252 nmdc:mga06r32_236082_c1 3300050510 Bacteria 1816
253 nmdc:mga06r32_38869_c1 3300050510 Bacteria 4511
254 nmdc:mga06r32_9967_c1 3300050510 Bacteria 8573
255 nmdc:mga08y16_1496_c1 3300050511 Bacteria 23521
256 nmdc:mga08y16_31688_c1 3300050511 Bacteria 5559
257 nmdc:mga08y16_6202_c1 3300050511 Bacteria 12544
258 nmdc:mga08y16_82259_c1 3300050511 Bacteria 3357
259 nmdc:mga0n895_110705_c1 3300050512 Bacteria 2762
260 nmdc:mga0n895_12477_c1 3300050512 Bacteria 7625
261 nmdc:mga0n895_16825_c1 3300050512 Bacteria 6721
262 nmdc:mga0n895_4031_c1 3300050512 Bacteria 11953
263 nmdc:mga0n895_43751_c1 3300050512 Bacteria 4365
264 nmdc:mga0n895_6138_c1 3300050512 Bacteria 10150
265 nmdc:mga0rr50_10478_c1 3300050513 Bacteria 5884
266 nmdc:mga08x19_15976_c1 3300050514 Bacteria 4574
267 nmdc:mga0a205_11150_c1 3300050515 Bacteria 8272
268 nmdc:mga0a205_14496_c2 3300050515 Bacteria 3789
269 nmdc:mga0a205_173_c1 3300050515 Bacteria 11499
270 nmdc:mga0a205_19529_c1 3300050515 Bacteria 6391
271 nmdc:mga0a205_32614_c1 3300050515 Bacteria 4994
272 nmdc:mga0a205_36747_c1 3300050515 Bacteria 4708
273 nmdc:mga0a205_40844_c1 3300050515 Bacteria 4467
274 Ga0500618_004442 3300053125 Bacteria 4486
275 Ga0501084_0000116 3300054114 Bacteria 60753
276 Ga0501084_0010757 3300054114 Bacteria 7575
277 Ga0501084_0017178 3300054114 Bacteria 6010
278 Ga0501082_0000146 3300060353 Bacteria 58922
279 Ga0501082_0000295 3300060353 Bacteria 44047
280 Ga0501082_0028092 3300060353 Bacteria 4847
281 Ga0530510_0012697 3300061734 Bacteria 5924
282 Ga0530510_0024181 3300061734 Bacteria 4334
283 2919139098 2919138771 Bacteria 5281312
284 Ga0265320_10010516
285 Ga0070690_100051111
286 Ga0070670_100035432
287 Ga0068869_100000339
288 Ga0070680_100000427
289 Ga0070680_100055360
290 Ga0070682_100000178
291 Ga0068868_100076025
292 Ga0070689_100011127
293 Ga0070689_100106475
294 Ga0070691_10007893
295 Ga0070691_10027949
296 Ga0070687_100012105
297 Ga0070661_100001950
298 Ga0070669_100049202
299 Ga0070671_100005050
300 Ga0070659_100006052
301 Ga0070703_10014011
302 Ga0070705_100000165
303 Ga0070705_100019067
304 Ga0070705_100049137
305 Ga0070694_100000730
306 Ga0070694_100062242
307 Ga0070708_100008907
308 Ga0070678_100079840
309 Ga0068867_100054598
310 Ga0070706_100005353
311 Ga0070706_100005577
312 Ga0070706_100026951
313 Ga0070706_100066686
314 Ga0070707_100003359
315 Ga0070707_100048362
316 Ga0070707_100060440
317 Ga0070698_100000270
318 Ga0070698_100004124
319 Ga0070698_100005919
320 Ga0070698_100014690
321 Ga0070698_100022904
322 Ga0070698_100023379
323 Ga0070698_100081945
324 Ga0070698_100105576
325 Ga0070699_100004525
326 Ga0070699_100013019
327 Ga0070699_100015549
328 Ga0070699_100093559
329 Ga0070697_100001059
330 Ga0070697_100048120
331 Ga0070697_100071476
332 Ga0068853_100006399
333 Ga0070686_100034727
334 Ga0070695_100002980
335 Ga0070696_100001876
336 Ga0070696_100017788
337 Ga0070693_100000015
338 Ga0070704_100055302
339 Ga0068857_100018648
340 Ga0068856_100048988
341 Ga0068859_100000314
342 Ga0068859_100100619
343 Ga0068864_100116247
344 Ga0068866_10036314
345 Ga0068861_100004073
346 Ga0068861_100057453
347 Ga0068861_100062554
348 Ga0068861_100115152
349 Ga0068870_10001022
350 Ga0068863_100115078
351 Ga0068858_100047115
352 Ga0068860_100003925
353 Ga0068862_100011929
354 Ga0068862_100038094
355 Ga0068862_100103984
356 Ga0081455_10000526
357 Ga0081455_10007070
358 Ga0081540_1025683
359 Ga0075365_10059771
360 Ga0070712_100042521
361 Ga0075367_10002958
362 Ga0075366_10001469
363 Ga0075428_100015579
364 Ga0075428_100017921
365 Ga0075428_100023867
366 Ga0075428_100058331
367 Ga0075428_100105327
368 Ga0075428_100131174
369 Ga0075430_100067864
370 Ga0075431_100001874
371 Ga0075431_100035905
372 Ga0075433_10004521
373 Ga0075433_10017947
374 Ga0075433_10018771
375 Ga0075433_10027873
376 Ga0075433_10046513
377 Ga0075434_100001305
378 Ga0075434_100014185
379 Ga0075434_100017785
380 Ga0075434_100018601
381 Ga0075434_100050786
382 Ga0075434_100111366
383 Ga0075429_100017588
384 Ga0075429_100077778
385 Ga0068865_100085002
386 Ga0097620_100000314
387 Ga0097620_100100617
388 Ga0075435_100012288
389 Ga0075435_100013093
390 Ga0075435_100020480
391 Ga0075435_100066504
392 Ga0099794_10013543
393 Ga0111539_10000760
394 Ga0111539_10002390
395 Ga0111539_10013287
396 Ga0111539_10014730
397 Ga0111539_10055665
398 Ga0111539_10089974
399 Ga0105247_10013399
400 Ga0114129_10004059
401 Ga0114129_10005727
402 Ga0114129_10008784
403 Ga0114129_10043604
404 Ga0114129_10141681
405 Ga0105243_10068726
406 Ga0105243_10125276
407 Ga0105248_10001873
408 Ga0105248_10028366
409 Ga0157372_10002774
410 Ga0157380_10031600
411 Ga0207653_10001224
412 Ga0207645_10000059
413 Ga0207643_10000014
414 Ga0207684_10002326
415 Ga0207684_10008250
416 Ga0207684_10011345
417 Ga0207684_10019076
418 Ga0207684_10030385
419 Ga0207684_10033329
420 Ga0207693_10001797
421 Ga0207660_10000831
422 Ga0207660_10040067
423 Ga0207662_10012381
424 Ga0207657_10001096
425 Ga0207646_10001645
426 Ga0207646_10026819
427 Ga0207646_10030017
428 Ga0207646_10055846
429 Ga0207646_10056087
430 Ga0207644_10004752
431 Ga0207690_10017662
432 Ga0207706_10040122
433 Ga0207709_10021134
434 Ga0207670_10050220
435 Ga0207669_10032634
436 Ga0207665_10023993
437 Ga0207691_10060326
438 Ga0207689_10000081
439 Ga0207689_10033958
440 Ga0207679_10011615
441 Ga0207651_10057949
442 Ga0207640_10083975
443 Ga0207703_10022301
444 Ga0207639_10007432
445 Ga0207678_10064627
446 Ga0207678_10069287
447 Ga0207708_10082635
448 Ga0207648_10076498
449 Ga0207676_10074221
450 Ga0207674_10012522
451 Ga0207674_10059801
452 Ga0207675_100012370
453 Ga0207675_100040980
454 Ga0207675_100043289
455 Ga0207675_100157349
456 Ga0207683_10037978
457 Ga0209970_1003624
458 Ga0209983_1000348
459 Ga0209971_1000088
460 Ga0209966_1000183
461 Ga0209998_10000045
462 Ga0207428_10000049
463 Ga0207428_10009526
464 Ga0268265_10048837
465 Ga0268265_10080107
466 Ga0316576_10050697
467 Ga0316584_0011969
468 Ga0451837_0836632
469 Ga0451577_0005684
470 Ga0451577_0024035
471 Ga0451577_0024663
472 Ga0451577_0032995
473 Ga0451577_0067057
474 Ga0451577_0087078
475 Ga0453684_0022941
476 Ga0451576_0007391
477 Ga0451576_0008754
478 Ga0451576_0024510
479 Ga0495638_0028511
480 Ga0495580_0001734
481 Ga0495658_0001196
482 Ga0495672_0001218
483 Ga0495676_0046025
484 Ga0496121_0001294
485 Ga0495682_0034264
486 Ga0501031_0077448
487 Ga0501040_0003229
488 Ga0501042_0001087
489 Ga0501046_0000141
490 Ga0501046_0021131
491 Ga0501046_0128866
492 Ga0501047_0003930
493 Ga0501047_0013703
494 Ga0501048_0019737
495 Ga0501067_0009010
496 Ga0501068_0004149
497 Ga0501068_0034550
498 Ga0501069_0020442
499 Ga0501071_0078420
500 Ga0501072_0000017
501 Ga0501072_0005874
502 Ga0501072_0016212
503 Ga0501074_0008231
504 Ga0501075_0002297
505 Ga0501075_0009017
506 Ga0501075_0019324
507 Ga0501075_0047342
508 Ga0501076_0015308
509 Ga0501076_0024419
510 Ga0501076_0043176
511 Ga0501077_0001452
512 Ga0501079_0001687
513 Ga0501079_0014755
514 Ga0501080_0009754
515 Ga0501080_0046323
516 Ga0501081_0002901
517 Ga0501081_0021597
518 Ga0501081_0033184
519 Ga0501083_0001624
520 Ga0501044_0012389
521 Ga0501045_0000297
522 Ga0501045_0049351
523 Ga0501045_0052285
524 nmdc:mga05p37_11678_c2
525 nmdc:mga05p37_118168_c1
526 nmdc:mga05p37_131584_c1
527 nmdc:mga05p37_29527_c1
528 nmdc:mga05p37_54109_c1
529 nmdc:mga09592_6523_c1
530 nmdc:mga09592_83897_c1
531 nmdc:mga0qj67_12062_c1
532 nmdc:mga0qj67_43322_c1
533 nmdc:mga0qj67_65683_c1
534 nmdc:mga06r32_20942_c1
535 nmdc:mga06r32_236082_c1
536 nmdc:mga06r32_38869_c1
537 nmdc:mga06r32_9967_c1
538 nmdc:mga08y16_1496_c1
539 nmdc:mga08y16_31688_c1
540 nmdc:mga08y16_6202_c1
541 nmdc:mga08y16_82259_c1
542 nmdc:mga0n895_110705_c1
543 nmdc:mga0n895_12477_c1
544 nmdc:mga0n895_16825_c1
545 nmdc:mga0n895_4031_c1
546 nmdc:mga0n895_43751_c1
547 nmdc:mga0n895_6138_c1
548 nmdc:mga0rr50_10478_c1
549 nmdc:mga08x19_15976_c1
550 nmdc:mga0a205_11150_c1
551 nmdc:mga0a205_14496_c2
552 nmdc:mga0a205_173_c1
553 nmdc:mga0a205_19529_c1
554 nmdc:mga0a205_32614_c1
555 nmdc:mga0a205_36747_c1
556 nmdc:mga0a205_40844_c1
557 Ga0500618_004442
558 Ga0501084_0000116
559 Ga0501084_0010757
560 Ga0501084_0017178
561 Ga0501082_0000146
562 Ga0501082_0000295
563 Ga0501082_0028092
564 Ga0530510_0012697
565 Ga0530510_0024181
566 2919139098

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00570

HRDC

HRDC domain

608

675

0.97

PF09382

RQC

RQC domain

467

578

0.95

PF00271

Helicase_C

Helicase conserved C-terminal domain

278

377

0.93

PF00270

DEAD

DEAD/DEAH box helicase

59

223

0.87

PF16124

RecQ_Zn_bind

RecQ zinc-binding

388

457

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2rhf-assembly1.cif.gz_A d. radiodurans recq hrdc domain 3 0.9703 562 633
1wud-assembly1.cif.gz_A e. coli recq hrdc domain 0.9687 563 635
2rhf-assembly1.cif.gz_A d. radiodurans recq hrdc domain 3 0.9091 562 633
1wud-assembly1.cif.gz_A e. coli recq hrdc domain 0.9082 563 635
1oyw-assembly1.cif.gz_A structure of the recq catalytic core 0.8802 10 529
ID Description Score Start End Superfamily
2rhfA00 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.9552 562 633 1.10.150.80
af_Q5WN04_489_661_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9501 245 352 3.40.50.300
af_Q9FT69_484_600_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9494 246 347 3.40.50.300
af_Q2G090_1_198_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9458 13 206 3.40.50.300
af_Q8I2W7_30_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9262 6 198 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C1SN43-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9646 12 126 GO:0003676
GO:0005524
GO:0005694
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0043138
AF-M6W2S2-F1-model_v4 DEAD/DEAH box helicase 0.9485 12 236 GO:0003676
GO:0005524
GO:0005694
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0016787
GO:0043138
AF-A0A7W5QDV2-F1-model_v4 deleted 0.9473 12 149
AF-A0A7C7BU58-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9463 14 207 GO:0003676
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0016787
GO:0030894
GO:0043138
GO:0043590
AF-A0A7C7BU58-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.937 14 207 GO:0003676
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0016787
GO:0030894
GO:0043138
GO:0043590

Map