F385654

General Info

Members Datasets Scaffolds Average Seq Length
283 173 566 165

Family's Representative Sequence

Representative Sequence 3300031235|Ga0265330_10241874|Ga0265330_102418742
Length 186
Sequence MRRSWRRWPNKVLVLGVDCGTRRTGYGVIESDGGGHKLVASGVISTNVKDPFEVRLHEIARGLREVIRRHAPVAAAVEQVFYAANVRTALKLAHVRGVALLAIAEAGLELGEYSPLEIKTSVVGYGQAGKRQVQVMVQSLLGLDSMIESEDACDALAVAICHATHSPWGRMASCAPIGNRRWANAK

Samples

Sample ID Description Type Environment
1 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
105 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
106 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
112 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
113 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
170 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 0.71
Rhizosphere 95.41
Stem 0
Stem Tuber 0
Unclassified 16.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265330_10241874 3300031235 Bacteria 761
2 Ga0068869_100526258 3300005334 Bacteria 990
3 Ga0070680_100106623 3300005336 Bacteria 2330
4 Ga0070680_100113511 3300005336 Bacteria 2257
5 Ga0070680_100930969 3300005336 Unclassified 750
6 Ga0068868_100147409 3300005338 Bacteria 1936
7 Ga0070689_101137348 3300005340 Bacteria 699
8 Ga0070668_100326425 3300005347 Bacteria 1293
9 Ga0070703_10082473 3300005406 Bacteria 1098
10 Ga0070709_10243941 3300005434 Bacteria 1291
11 Ga0070714_101291557 3300005435 Unclassified 712
12 Ga0070713_100007419 3300005436 Bacteria 7695
13 Ga0070713_100628991 3300005436 Unclassified 1021
14 Ga0070713_100653166 3300005436 Unclassified 1002
15 Ga0070713_101427238 3300005436 Bacteria 671
16 Ga0070710_10531717 3300005437 Unclassified 809
17 Ga0070710_10551682 3300005437 Bacteria 796
18 Ga0070711_100469648 3300005439 Bacteria 1032
19 Ga0070705_101183301 3300005440 Bacteria 629
20 Ga0070708_100047787 3300005445 Bacteria 3781
21 Ga0070708_100310215 3300005445 Bacteria 1486
22 Ga0070708_101116538 3300005445 Bacteria 738
23 Ga0070681_10072391 3300005458 Bacteria 3409
24 Ga0070681_10116052 3300005458 Unclassified 2614
25 Ga0070706_101485843 3300005467 Unclassified 619
26 Ga0070699_100007973 3300005518 Bacteria 9195
27 Ga0070699_101615625 3300005518 Bacteria 594
28 Ga0070679_100336896 3300005530 Bacteria 1457
29 Ga0070679_100406393 3300005530 Bacteria 1307
30 Ga0070684_100255537 3300005535 Bacteria 1602
31 Ga0070697_100102619 3300005536 Bacteria 2377
32 Ga0070697_100200547 3300005536 Bacteria 1696
33 Ga0068853_100155906 3300005539 Unclassified 2058
34 Ga0070686_100093098 3300005544 Bacteria 2020
35 Ga0070686_101183941 3300005544 Bacteria 634
36 Ga0070695_100223249 3300005545 Bacteria 1358
37 Ga0070696_100009856 3300005546 Bacteria 6390
38 Ga0070693_101050154 3300005547 Unclassified 619
39 Ga0070665_100486271 3300005548 Bacteria 1245
40 Ga0070665_100575110 3300005548 Bacteria 1139
41 Ga0070665_100994755 3300005548 Bacteria 851
42 Ga0070704_100491834 3300005549 Bacteria 1063
43 Ga0068855_100041758 3300005563 Bacteria 5434
44 Ga0068859_100148758 3300005617 Bacteria 2417
45 Ga0068858_100154607 3300005842 Bacteria 2158
46 Ga0068858_100931232 3300005842 Bacteria 850
47 Ga0068860_100819048 3300005843 Unclassified 945
48 Ga0068860_101214180 3300005843 Unclassified 774
49 Ga0068862_100467829 3300005844 Bacteria 1191
50 Ga0070717_10000588 3300006028 Bacteria 23224
51 Ga0070717_10067138 3300006028 Bacteria 2983
52 Ga0070716_100807467 3300006173 Bacteria 727
53 Ga0070716_100931936 3300006173 Bacteria 682
54 Ga0097621_100286500 3300006237 Bacteria 1451
55 Ga0068871_100632748 3300006358 Bacteria 975
56 Ga0075431_100022013 3300006847 Bacteria 6518
57 Ga0075433_10929568 3300006852 Bacteria 758
58 Ga0075436_100099614 3300006914 Bacteria 2023
59 Ga0097620_100148757 3300006931 Bacteria 2417
60 Ga0075435_100473628 3300007076 Bacteria 1081
61 Ga0105240_10218124 3300009093 Bacteria 2224
62 Ga0105240_10329775 3300009093 Bacteria 1737
63 Ga0105240_10511733 3300009093 Bacteria 1333
64 Ga0105240_11734692 3300009093 Bacteria 651
65 Ga0105245_10534049 3300009098 Bacteria 1193
66 Ga0105247_10286725 3300009101 Bacteria 1137
67 Ga0114129_12288282 3300009147 Unclassified 649
68 Ga0105242_10786296 3300009176 Bacteria 940
69 Ga0105248_10017463 3300009177 Bacteria 7912
70 Ga0105248_10154361 3300009177 Bacteria 2590
71 Ga0105248_10948430 3300009177 Bacteria 972
72 Ga0105237_10024235 3300009545 Bacteria 6209
73 Ga0105237_10107375 3300009545 Bacteria 2783
74 Ga0105237_10192839 3300009545 Bacteria 2037
75 Ga0105237_10938069 3300009545 Bacteria 872
76 Ga0105237_11238876 3300009545 Bacteria 752
77 Ga0105238_10413592 3300009551 Bacteria 1342
78 Ga0105249_11444160 3300009553 Unclassified 760
79 Ga0105239_10089415 3300010375 Bacteria 3396
80 Ga0105239_10247595 3300010375 Unclassified 2001
81 Ga0157370_11185504 3300013104 Bacteria 689
82 Ga0157369_10000176 3300013105 Bacteria 89387
83 Ga0157369_10047979 3300013105 Bacteria 4635
84 Ga0157369_10167419 3300013105 Bacteria 2317
85 Ga0157374_10248406 3300013296 Bacteria 1750
86 Ga0157374_10409336 3300013296 Bacteria 1354
87 Ga0157374_11560520 3300013296 Unclassified 684
88 Ga0157378_10109970 3300013297 Unclassified 2525
89 Ga0157378_10513289 3300013297 Bacteria 1199
90 Ga0157378_11615101 3300013297 Bacteria 694
91 Ga0163162_10409937 3300013306 Bacteria 1488
92 Ga0157372_10084137 3300013307 Bacteria 3605
93 Ga0163163_10132668 3300014325 Bacteria 2531
94 Ga0163163_10137061 3300014325 Bacteria 2489
95 Ga0163163_10561870 3300014325 Unclassified 1204
96 Ga0157379_10037318 3300014968 Bacteria 4332
97 Ga0157376_11460962 3300014969 Bacteria 716
98 Ga0213875_10021016 3300021388 Bacteria 3130
99 Ga0213875_10149473 3300021388 Bacteria 1094
100 Ga0213871_10101179 3300021441 Unclassified 843
101 Ga0207692_10183040 3300025898 Bacteria 1222
102 Ga0207680_10808910 3300025903 Unclassified 672
103 Ga0207699_10984299 3300025906 Unclassified 623
104 Ga0207705_10015765 3300025909 Bacteria 5427
105 Ga0207654_10446212 3300025911 Unclassified 906
106 Ga0207707_10015881 3300025912 Bacteria 6567
107 Ga0207707_10051290 3300025912 Bacteria 3593
108 Ga0207707_10175348 3300025912 Bacteria 1873
109 Ga0207695_10002383 3300025913 Bacteria 27875
110 Ga0207695_10236532 3300025913 Bacteria 1729
111 Ga0207695_10506599 3300025913 Bacteria 1089
112 Ga0207695_10555142 3300025913 Bacteria 1030
113 Ga0207671_10023277 3300025914 Bacteria 4672
114 Ga0207671_10122193 3300025914 Bacteria 1991
115 Ga0207671_10489317 3300025914 Bacteria 981
116 Ga0207660_10113489 3300025917 Bacteria 2042
117 Ga0207660_10179816 3300025917 Bacteria 1642
118 Ga0207652_10139502 3300025921 Bacteria 2167
119 Ga0207652_10246771 3300025921 Bacteria 1610
120 Ga0207646_10757386 3300025922 Bacteria 866
121 Ga0207681_10432592 3300025923 Unclassified 1068
122 Ga0207694_10164833 3300025924 Bacteria 1792
123 Ga0207650_10645700 3300025925 Bacteria 892
124 Ga0207687_10381767 3300025927 Bacteria 1154
125 Ga0207700_10014779 3300025928 Bacteria 5126
126 Ga0207700_10236102 3300025928 Bacteria 1557
127 Ga0207664_11093043 3300025929 Unclassified 713
128 Ga0207686_10463735 3300025934 Bacteria 977
129 Ga0207665_10083568 3300025939 Bacteria 2203
130 Ga0207665_10152934 3300025939 Bacteria 1654
131 Ga0207711_10145129 3300025941 Bacteria 2138
132 Ga0207711_10541120 3300025941 Bacteria 1086
133 Ga0207689_10747526 3300025942 Bacteria 825
134 Ga0207679_11167792 3300025945 Bacteria 706
135 Ga0207667_10356501 3300025949 Bacteria 1491
136 Ga0207667_10506999 3300025949 Bacteria 1223
137 Ga0207668_10658720 3300025972 Bacteria 917
138 Ga0207677_10840867 3300026023 Unclassified 824
139 Ga0207703_10330579 3300026035 Bacteria 1398
140 Ga0207639_10381186 3300026041 Bacteria 1266
141 Ga0207639_11747303 3300026041 Unclassified 582
142 Ga0207708_10395262 3300026075 Bacteria 1142
143 Ga0207641_11474772 3300026088 Bacteria 682
144 Ga0207676_10737992 3300026095 Bacteria 957
145 Ga0207676_10791499 3300026095 Bacteria 925
146 Ga0207675_101242573 3300026118 Bacteria 765
147 Ga0207683_10341954 3300026121 Bacteria 1372
148 Ga0207428_10163266 3300027907 Bacteria 1690
149 Ga0268266_10017402 3300028379 Bacteria 6133
150 Ga0268266_10581536 3300028379 Bacteria 1075
151 Ga0268266_11401353 3300028379 Bacteria 674
152 Ga0268265_10904112 3300028380 Bacteria 867
153 Ga0268264_11136839 3300028381 Unclassified 790
154 Ga0265336_10025289 3300028666 Bacteria 1871
155 Ga0265324_10156222 3300029957 Bacteria 774
156 Ga0265760_10151230 3300031090 Bacteria 761
157 Ga0265330_10064013 3300031235 Bacteria 1598
158 Ga0265330_10181968 3300031235 Bacteria 890
159 Ga0265330_10241640 3300031235 Bacteria 761
160 Ga0265332_10080492 3300031238 Bacteria 1382
161 Ga0265328_10035109 3300031239 Bacteria 1855
162 Ga0265320_10001076 3300031240 Bacteria 20162
163 Ga0265325_10047181 3300031241 Bacteria 2231
164 Ga0265339_10381591 3300031249 Bacteria 661
165 Ga0265331_10226650 3300031250 Bacteria 839
166 Ga0265316_10077348 3300031344 Bacteria 2555
167 Ga0265316_10140475 3300031344 Bacteria 1814
168 Ga0265316_10157669 3300031344 Bacteria 1698
169 Ga0265316_10195178 3300031344 Bacteria 1503
170 Ga0265316_10221859 3300031344 Bacteria 1394
171 Ga0265316_10394768 3300031344 Bacteria 997
172 Ga0265313_10126039 3300031595 Bacteria 1113
173 Ga0265314_10200420 3300031711 Bacteria 1180
174 Ga0265314_10218418 3300031711 Bacteria 1114
175 Ga0265342_10117643 3300031712 Bacteria 1499
176 Ga0373926_0262618 3300035083 Bacteria 670
177 Ga0373923_0360178 3300035111 Bacteria 696
178 Ga0373923_0436704 3300035111 Bacteria 633
179 Ga0373936_0482454 3300035113 Unclassified 575
180 Ga0373945_0044845 3300035116 Unclassified 1609
181 Ga0373954_0022539 3300035118 Bacteria 2858
182 Ga0373954_0346347 3300035118 Bacteria 734
183 Ga0373956_0100322 3300035119 Bacteria 1342
184 Ga0373946_0120091 3300035171 Unclassified 1199
185 Ga0373946_0301931 3300035171 Bacteria 792
186 Ga0373955_0172371 3300035172 Bacteria 1281
187 Ga0373955_0194791 3300035172 Bacteria 1206
188 Ga0373935_0070454 3300035692 Bacteria 2254
189 Ga0373935_0170438 3300035692 Bacteria 1489
190 Ga0373927_0004369 3300035695 Bacteria 9913
191 Ga0373927_0014067 3300035695 Bacteria 5305
192 Ga0373927_0014889 3300035695 Bacteria 5144
193 Ga0373927_0758361 3300035695 Bacteria 641
194 Ga0373927_0932196 3300035695 Unclassified 573
195 Ga0373933_0277460 3300035724 Unclassified 1083
196 Ga0373933_0283401 3300035724 Bacteria 1071
197 Ga0373947_0000791 3300035725 Bacteria 19015
198 Ga0373947_0069849 3300035725 Bacteria 2151
199 Ga0373947_0141567 3300035725 Bacteria 1543
200 Ga0373947_0199584 3300035725 Bacteria 1308
201 Ga0373947_0487249 3300035725 Bacteria 837
202 Ga0373937_0048449 3300036401 Bacteria 3890
203 Ga0373937_0751839 3300036401 Bacteria 922
204 Ga0373937_0775901 3300036401 Bacteria 906
205 Ga0373925_0000437 3300037068 Bacteria 42142
206 Ga0373925_0184838 3300037068 Bacteria 1652
207 Ga0373925_0234440 3300037068 Bacteria 1468
208 Ga0373925_0300105 3300037068 Bacteria 1297
209 Ga0373925_0393957 3300037068 Bacteria 1129
210 Ga0373925_0499734 3300037068 Bacteria 998
211 Ga0395905_0141513 3300037471 Bacteria 2263
212 Ga0436364_0865078 3300037853 Bacteria 1322
213 Ga0436364_1013395 3300037853 Bacteria 1856
214 Ga0436364_1074929 3300037853 Bacteria 14867
215 Ga0436364_1233755 3300037853 Bacteria 2474
216 Ga0436364_1470308 3300037853 Bacteria 2262
217 Ga0436364_1487872 3300037853 Bacteria 5286
218 Ga0436365_0851190 3300039437 Bacteria 709
219 Ga0436365_1164011 3300039437 Unclassified 1846
220 Ga0436360_0552269 3300039438 Bacteria 14440
221 Ga0436362_0502788 3300039453 Bacteria 1186
222 Ga0451577_0498412 3300042876 Unclassified 1106
223 Ga0451577_1769415 3300042876 Unclassified 543
224 Ga0466963_0924921 3300044694 Unclassified 614
225 Ga0453684_0584475 3300044712 Bacteria 1226
226 Ga0453684_0844509 3300044712 Bacteria 984
227 Ga0451576_0027208 3300045051 Bacteria 6144
228 Ga0451576_0170101 3300045051 Bacteria 2274
229 Ga0466967_0055486 3300045976 Bacteria 3490
230 Ga0495603_0072453 3300046455 Bacteria 2024
231 Ga0495651_0555644 3300046462 Bacteria 729
232 Ga0495653_0246604 3300046463 Bacteria 1187
233 Ga0495653_0488353 3300046463 Bacteria 769
234 Ga0495580_0043634 3300046472 Bacteria 3191
235 Ga0495580_0066146 3300046472 Bacteria 2531
236 Ga0495580_0571265 3300046472 Bacteria 749
237 Ga0495580_0769892 3300046472 Unclassified 626
238 Ga0495639_0518187 3300046475 Unclassified 609
239 Ga0495665_0170156 3300046531 Bacteria 1134
240 Ga0495665_0283138 3300046531 Unclassified 850
241 Ga0495665_0452996 3300046531 Unclassified 648
242 Ga0495586_0391460 3300046535 Bacteria 800
243 Ga0495624_0417054 3300046690 Bacteria 805
244 Ga0495624_0457543 3300046690 Unclassified 764
245 Ga0495674_0056344 3300047319 Bacteria 3443
246 Ga0495674_1006732 3300047319 Bacteria 638
247 Ga0496104_0250210 3300048907 Bacteria 1685
248 Ga0496110_0244901 3300048913 Bacteria 1632
249 Ga0501034_1057413 3300049571 Unclassified 694
250 Ga0501040_0757599 3300049576 Bacteria 702
251 Ga0501041_0193100 3300049577 Bacteria 1276
252 Ga0501042_0132706 3300049578 Bacteria 1795
253 Ga0501046_0482077 3300049580 Bacteria 890
254 Ga0501046_0821673 3300049580 Bacteria 651
255 Ga0501068_0548254 3300049584 Unclassified 752
256 Ga0501071_0205860 3300049587 Bacteria 1479
257 Ga0501072_0206390 3300049588 Bacteria 1566
258 Ga0501074_0547569 3300049590 Bacteria 819
259 Ga0501075_0030623 3300049591 Bacteria 3987
260 Ga0501076_0033795 3300049592 Bacteria 3993
261 Ga0501077_0018960 3300049593 Bacteria 4351
262 Ga0501081_0045544 3300049743 Bacteria 3012
263 Ga0501081_0750697 3300049743 Bacteria 733
264 Ga0501083_0589327 3300049744 Unclassified 723
265 Ga0501045_0555986 3300049824 Bacteria 851
266 nmdc:mga05p37_199033_c1 3300050507 Bacteria 2427
267 nmdc:mga05p37_474009_c1 3300050507 Unclassified 1443
268 nmdc:mga09592_1456407_c1 3300050508 Bacteria 558
269 nmdc:mga06r32_148136_c1 3300050510 Bacteria 2325
270 nmdc:mga08y16_387494_c1 3300050511 Bacteria 1432
271 nmdc:mga0n895_332395_c1 3300050512 Bacteria 1539
272 nmdc:mga0rr50_90809_c1 3300050513 Bacteria 2377
273 nmdc:mga08x19_12292_c1 3300050514 Bacteria 5155
274 Ga0495612_0363378 3300053078 Unclassified 654
275 Ga0500604_0045004 3300053151 Bacteria 1346
276 Ga0501084_0004601 3300054114 Bacteria 11273
277 Ga0501084_0146388 3300054114 Bacteria 1990
278 Ga0501084_0337624 3300054114 Bacteria 1273
279 Ga0501082_0009592 3300060353 Bacteria 8332
280 Ga0501082_0064439 3300060353 Bacteria 3156
281 Ga0501082_0694253 3300060353 Bacteria 891
282 Ga0501082_1374704 3300060353 Bacteria 617
283 Ga0530510_0489144 3300061734 Unclassified 932
284 Ga0265330_10241874
285 Ga0068869_100526258
286 Ga0070680_100106623
287 Ga0070680_100113511
288 Ga0070680_100930969
289 Ga0068868_100147409
290 Ga0070689_101137348
291 Ga0070668_100326425
292 Ga0070703_10082473
293 Ga0070709_10243941
294 Ga0070714_101291557
295 Ga0070713_100007419
296 Ga0070713_100628991
297 Ga0070713_100653166
298 Ga0070713_101427238
299 Ga0070710_10531717
300 Ga0070710_10551682
301 Ga0070711_100469648
302 Ga0070705_101183301
303 Ga0070708_100047787
304 Ga0070708_100310215
305 Ga0070708_101116538
306 Ga0070681_10072391
307 Ga0070681_10116052
308 Ga0070706_101485843
309 Ga0070699_100007973
310 Ga0070699_101615625
311 Ga0070679_100336896
312 Ga0070679_100406393
313 Ga0070684_100255537
314 Ga0070697_100102619
315 Ga0070697_100200547
316 Ga0068853_100155906
317 Ga0070686_100093098
318 Ga0070686_101183941
319 Ga0070695_100223249
320 Ga0070696_100009856
321 Ga0070693_101050154
322 Ga0070665_100486271
323 Ga0070665_100575110
324 Ga0070665_100994755
325 Ga0070704_100491834
326 Ga0068855_100041758
327 Ga0068859_100148758
328 Ga0068858_100154607
329 Ga0068858_100931232
330 Ga0068860_100819048
331 Ga0068860_101214180
332 Ga0068862_100467829
333 Ga0070717_10000588
334 Ga0070717_10067138
335 Ga0070716_100807467
336 Ga0070716_100931936
337 Ga0097621_100286500
338 Ga0068871_100632748
339 Ga0075431_100022013
340 Ga0075433_10929568
341 Ga0075436_100099614
342 Ga0097620_100148757
343 Ga0075435_100473628
344 Ga0105240_10218124
345 Ga0105240_10329775
346 Ga0105240_10511733
347 Ga0105240_11734692
348 Ga0105245_10534049
349 Ga0105247_10286725
350 Ga0114129_12288282
351 Ga0105242_10786296
352 Ga0105248_10017463
353 Ga0105248_10154361
354 Ga0105248_10948430
355 Ga0105237_10024235
356 Ga0105237_10107375
357 Ga0105237_10192839
358 Ga0105237_10938069
359 Ga0105237_11238876
360 Ga0105238_10413592
361 Ga0105249_11444160
362 Ga0105239_10089415
363 Ga0105239_10247595
364 Ga0157370_11185504
365 Ga0157369_10000176
366 Ga0157369_10047979
367 Ga0157369_10167419
368 Ga0157374_10248406
369 Ga0157374_10409336
370 Ga0157374_11560520
371 Ga0157378_10109970
372 Ga0157378_10513289
373 Ga0157378_11615101
374 Ga0163162_10409937
375 Ga0157372_10084137
376 Ga0163163_10132668
377 Ga0163163_10137061
378 Ga0163163_10561870
379 Ga0157379_10037318
380 Ga0157376_11460962
381 Ga0213875_10021016
382 Ga0213875_10149473
383 Ga0213871_10101179
384 Ga0207692_10183040
385 Ga0207680_10808910
386 Ga0207699_10984299
387 Ga0207705_10015765
388 Ga0207654_10446212
389 Ga0207707_10015881
390 Ga0207707_10051290
391 Ga0207707_10175348
392 Ga0207695_10002383
393 Ga0207695_10236532
394 Ga0207695_10506599
395 Ga0207695_10555142
396 Ga0207671_10023277
397 Ga0207671_10122193
398 Ga0207671_10489317
399 Ga0207660_10113489
400 Ga0207660_10179816
401 Ga0207652_10139502
402 Ga0207652_10246771
403 Ga0207646_10757386
404 Ga0207681_10432592
405 Ga0207694_10164833
406 Ga0207650_10645700
407 Ga0207687_10381767
408 Ga0207700_10014779
409 Ga0207700_10236102
410 Ga0207664_11093043
411 Ga0207686_10463735
412 Ga0207665_10083568
413 Ga0207665_10152934
414 Ga0207711_10145129
415 Ga0207711_10541120
416 Ga0207689_10747526
417 Ga0207679_11167792
418 Ga0207667_10356501
419 Ga0207667_10506999
420 Ga0207668_10658720
421 Ga0207677_10840867
422 Ga0207703_10330579
423 Ga0207639_10381186
424 Ga0207639_11747303
425 Ga0207708_10395262
426 Ga0207641_11474772
427 Ga0207676_10737992
428 Ga0207676_10791499
429 Ga0207675_101242573
430 Ga0207683_10341954
431 Ga0207428_10163266
432 Ga0268266_10017402
433 Ga0268266_10581536
434 Ga0268266_11401353
435 Ga0268265_10904112
436 Ga0268264_11136839
437 Ga0265336_10025289
438 Ga0265324_10156222
439 Ga0265760_10151230
440 Ga0265330_10064013
441 Ga0265330_10181968
442 Ga0265330_10241640
443 Ga0265332_10080492
444 Ga0265328_10035109
445 Ga0265320_10001076
446 Ga0265325_10047181
447 Ga0265339_10381591
448 Ga0265331_10226650
449 Ga0265316_10077348
450 Ga0265316_10140475
451 Ga0265316_10157669
452 Ga0265316_10195178
453 Ga0265316_10221859
454 Ga0265316_10394768
455 Ga0265313_10126039
456 Ga0265314_10200420
457 Ga0265314_10218418
458 Ga0265342_10117643
459 Ga0373926_0262618
460 Ga0373923_0360178
461 Ga0373923_0436704
462 Ga0373936_0482454
463 Ga0373945_0044845
464 Ga0373954_0022539
465 Ga0373954_0346347
466 Ga0373956_0100322
467 Ga0373946_0120091
468 Ga0373946_0301931
469 Ga0373955_0172371
470 Ga0373955_0194791
471 Ga0373935_0070454
472 Ga0373935_0170438
473 Ga0373927_0004369
474 Ga0373927_0014067
475 Ga0373927_0014889
476 Ga0373927_0758361
477 Ga0373927_0932196
478 Ga0373933_0277460
479 Ga0373933_0283401
480 Ga0373947_0000791
481 Ga0373947_0069849
482 Ga0373947_0141567
483 Ga0373947_0199584
484 Ga0373947_0487249
485 Ga0373937_0048449
486 Ga0373937_0751839
487 Ga0373937_0775901
488 Ga0373925_0000437
489 Ga0373925_0184838
490 Ga0373925_0234440
491 Ga0373925_0300105
492 Ga0373925_0393957
493 Ga0373925_0499734
494 Ga0395905_0141513
495 Ga0436364_0865078
496 Ga0436364_1013395
497 Ga0436364_1074929
498 Ga0436364_1233755
499 Ga0436364_1470308
500 Ga0436364_1487872
501 Ga0436365_0851190
502 Ga0436365_1164011
503 Ga0436360_0552269
504 Ga0436362_0502788
505 Ga0451577_0498412
506 Ga0451577_1769415
507 Ga0466963_0924921
508 Ga0453684_0584475
509 Ga0453684_0844509
510 Ga0451576_0027208
511 Ga0451576_0170101
512 Ga0466967_0055486
513 Ga0495603_0072453
514 Ga0495651_0555644
515 Ga0495653_0246604
516 Ga0495653_0488353
517 Ga0495580_0043634
518 Ga0495580_0066146
519 Ga0495580_0571265
520 Ga0495580_0769892
521 Ga0495639_0518187
522 Ga0495665_0170156
523 Ga0495665_0283138
524 Ga0495665_0452996
525 Ga0495586_0391460
526 Ga0495624_0417054
527 Ga0495624_0457543
528 Ga0495674_0056344
529 Ga0495674_1006732
530 Ga0496104_0250210
531 Ga0496110_0244901
532 Ga0501034_1057413
533 Ga0501040_0757599
534 Ga0501041_0193100
535 Ga0501042_0132706
536 Ga0501046_0482077
537 Ga0501046_0821673
538 Ga0501068_0548254
539 Ga0501071_0205860
540 Ga0501072_0206390
541 Ga0501074_0547569
542 Ga0501075_0030623
543 Ga0501076_0033795
544 Ga0501077_0018960
545 Ga0501081_0045544
546 Ga0501081_0750697
547 Ga0501083_0589327
548 Ga0501045_0555986
549 nmdc:mga05p37_199033_c1
550 nmdc:mga05p37_474009_c1
551 nmdc:mga09592_1456407_c1
552 nmdc:mga06r32_148136_c1
553 nmdc:mga08y16_387494_c1
554 nmdc:mga0n895_332395_c1
555 nmdc:mga0rr50_90809_c1
556 nmdc:mga08x19_12292_c1
557 Ga0495612_0363378
558 Ga0500604_0045004
559 Ga0501084_0004601
560 Ga0501084_0146388
561 Ga0501084_0337624
562 Ga0501082_0009592
563 Ga0501082_0064439
564 Ga0501082_0694253
565 Ga0501082_1374704
566 Ga0530510_0489144

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02075

RuvC

Crossover junction endodeoxyribonuclease RuvC

14

162

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lw3-assembly1.cif.gz_B crystal structure of ruvc from pseudomonas aeruginosa 0.9653 2 151
7xhj-assembly1.cif.gz_A crystal structure of ruvc from deinococcus radiodurans 0.9652 1 154
6s16-assembly1.cif.gz_B t. thermophilus ruvc in complex with holliday junction substrate 0.9584 2 158
4ld0-assembly1.cif.gz_B t. thermophilus ruvc in complex with holliday junction substrate 0.9566 1 158
1hjr-assembly2.cif.gz_D atomic structure of the ruvc resolvase: a holliday junction-specific endonuclease from e. coli 0.9541 1 155
ID Description Score Start End Superfamily
af_P9WGV9_1_161_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9733 1 157 3.30.420.10
4ld0B00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9566 1 158 3.30.420.10
1hjrC00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9542 1 155 3.30.420.10
af_P9WGV9_1_161_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9438 1 157 3.30.420.10
1hjrC00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9193 1 155 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A1F2RA26-F1-model_v4 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.21.10) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC) 0.9956 2 166 GO:0000287
GO:0003677
GO:0005737
GO:0006281
GO:0006310
GO:0008821
GO:0048476
AF-A0A3B9MQ23-F1-model_v4 Crossover junction endodeoxyribonuclease RuvC 0.9956 1 69 GO:0003677
GO:0004520
GO:0006281
GO:0006310
GO:0046872
AF-A0A0S8IRM4-F1-model_v4 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.21.10) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC) 0.9909 1 167 GO:0000287
GO:0003677
GO:0005737
GO:0006281
GO:0006310
GO:0008821
GO:0048476
AF-A0A838K4F9-F1-model_v4 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.21.10) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC) 0.9867 1 160 GO:0000287
GO:0003677
GO:0005737
GO:0006281
GO:0006310
GO:0008821
GO:0048476
AF-A0A0W0HC67-F1-model_v4 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.21.10) 0.9867 44 157 GO:0003677
GO:0006281
GO:0006310
GO:0008821
GO:0046872

Map