F385454

General Info

Members Datasets Scaffolds Average Seq Length
283 204 270 295

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100027883|Ga0068859_1000278832
Length 306
Sequence MTTATSTMKILLLGKNGQVGWELQRSLSTLGEVVALDFDSPGPLTADFSRPESLAATVRAVQPRIIVNAAAHTAVDRCESEPDLARAINATAPGVLAREAAALGAALLHYSTDYVFDGSGSTARIEDAPTGPLNVYGQTKLEGEQAIRASGCRHLILRTSWVYAARGGNFAKTMLKLAQERDRLKVIDDQIGAPTGADLLADISAHALRALQWRPELAGTYHAVAQGETSWHGYASHVIEHARAAGLSIKVAPEAIEAVPTSAFPTPARRPANSRLDTHKLRETFGIALPPWQAGVDRMLTEILTP

Samples

Sample ID Description Type Environment
1 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
2 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
3 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
4 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
5 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
6 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
7 2636415599 Klebsiella variicola DX120E Isolate Unclassified
8 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
9 2775507074 Klebsiella sp. D5A Isolate Unclassified
10 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
11 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
12 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
94 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
102 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
109 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
126 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
127 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
128 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
129 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
130 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
131 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
132 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
133 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
134 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
135 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
136 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
137 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
138 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
139 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
145 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
152 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
153 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
154 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
155 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
156 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
157 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
158 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
159 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
160 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
161 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
165 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
174 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
181 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
185 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
189 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
190 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
191 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
196 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
197 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
198 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
199 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
200 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
203 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
204 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.41
Metatranscriptomes 0
Isolates 4.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.72
Nodule 0.71
Rhizoplane 2.83
Rhizosphere 70.67
Stem 0
Stem Tuber 0
Unclassified 13.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10059179 3300003322 Bacteria 1604
2 Ga0058692_1000468 3300003856 Bacteria 18161
3 Ga0070676_10003628 3300005328 Bacteria 8071
4 Ga0070676_10019340 3300005328 Bacteria 3787
5 Ga0070676_10112233 3300005328 Bacteria 1699
6 Ga0070676_10124045 3300005328 Bacteria 1625
7 Ga0070670_100007464 3300005331 Bacteria 9284
8 Ga0068869_100096864 3300005334 Bacteria 2227
9 Ga0068869_100233975 3300005334 Bacteria 1461
10 Ga0068868_100074315 3300005338 Bacteria 2715
11 Ga0068868_100075820 3300005338 Bacteria 2688
12 Ga0070668_100096753 3300005347 Bacteria 2334
13 Ga0070675_100013001 3300005354 Bacteria 6536
14 Ga0070675_100304899 3300005354 Bacteria 1404
15 Ga0070671_100007464 3300005355 Bacteria 8740
16 Ga0070671_100026802 3300005355 Bacteria 4740
17 Ga0070674_100177501 3300005356 Bacteria 1628
18 Ga0070673_100059165 3300005364 Bacteria 3032
19 Ga0070673_100152604 3300005364 Bacteria 1957
20 Ga0070667_100156021 3300005367 Bacteria 2008
21 Ga0070667_100344182 3300005367 Bacteria 1349
22 Ga0070678_100014023 3300005456 Bacteria 5040
23 Ga0070662_100017500 3300005457 Bacteria 4834
24 Ga0070662_100306489 3300005457 Bacteria 1292
25 Ga0068867_100004040 3300005459 Bacteria 10322
26 Ga0068867_100022588 3300005459 Bacteria 4497
27 Ga0068867_100036358 3300005459 Bacteria 3575
28 Ga0070706_100000803 3300005467 Bacteria 34870
29 Ga0070698_100228985 3300005471 Bacteria 1792
30 Ga0070699_100055663 3300005518 Bacteria 3425
31 Ga0070672_100004699 3300005543 Bacteria 8956
32 Ga0070672_100041787 3300005543 Bacteria 3527
33 Ga0070665_100027141 3300005548 Bacteria 5767
34 Ga0070665_100069240 3300005548 Bacteria 3537
35 Ga0068855_100364745 3300005563 Bacteria 1589
36 Ga0068857_100487811 3300005577 Bacteria 1155
37 Ga0068854_100062184 3300005578 Bacteria 2706
38 Ga0068852_100310223 3300005616 Bacteria 1529
39 Ga0068859_100027883 3300005617 Bacteria 5663
40 Ga0068859_100063075 3300005617 Bacteria 3736
41 Ga0068864_100027184 3300005618 Bacteria 4829
42 Ga0068851_10091731 3300005834 Bacteria 1600
43 Ga0068863_100023453 3300005841 Bacteria 5892
44 Ga0068858_100228347 3300005842 Bacteria 1764
45 Ga0075365_10006753 3300006038 Bacteria 6349
46 Ga0075368_10001189 3300006042 Bacteria 8212
47 Ga0075368_10046372 3300006042 Bacteria 1719
48 Ga0075363_100000237 3300006048 Bacteria 15439
49 Ga0075362_10000372 3300006177 Bacteria 12865
50 Ga0075367_10009555 3300006178 Bacteria 5073
51 Ga0075367_10016300 3300006178 Bacteria 4057
52 Ga0075366_10012313 3300006195 Bacteria 4849
53 Ga0075366_10015546 3300006195 Bacteria 4365
54 Ga0075366_10016815 3300006195 Bacteria 4204
55 Ga0075366_10038699 3300006195 Bacteria 2817
56 Ga0075366_10060222 3300006195 Bacteria 2255
57 Ga0097621_100016738 3300006237 Bacteria 5553
58 Ga0075370_10000108 3300006353 Bacteria 26683
59 Ga0075370_10001038 3300006353 Bacteria 11543
60 Ga0075370_10031052 3300006353 Bacteria 2982
61 Ga0075370_10058014 3300006353 Bacteria 2201
62 Ga0068871_100230037 3300006358 Bacteria 1609
63 Ga0075436_100114349 3300006914 Bacteria 1884
64 Ga0097620_100027883 3300006931 Bacteria 5663
65 Ga0097620_100063074 3300006931 Bacteria 3736
66 Ga0079104_1005610 3300006946 Bacteria 4970
67 Ga0075435_100013421 3300007076 Bacteria 6095
68 Ga0105244_10001607 3300009036 Bacteria 17942
69 Ga0105250_10000101 3300009092 Bacteria 76942
70 Ga0105250_10001801 3300009092 Bacteria 11221
71 Ga0111539_10028815 3300009094 Bacteria 6772
72 Ga0111539_10608992 3300009094 Bacteria 1272
73 Ga0105245_10024461 3300009098 Bacteria 5304
74 Ga0105237_10008769 3300009545 Bacteria 10910
75 Ga0105249_10110467 3300009553 Bacteria 2598
76 Ga0105249_10192863 3300009553 Bacteria 1989
77 Ga0105239_10061120 3300010375 Bacteria 4134
78 Ga0157371_10005686 3300013102 Bacteria 10455
79 Ga0157379_10245532 3300014968 Bacteria 1624
80 Ga0213876_10000034 3300021384 Bacteria 202967
81 Ga0207697_10008374 3300025315 Bacteria 4527
82 Ga0207696_1000013 3300025711 Bacteria 524881
83 Ga0207696_1001558 3300025711 Bacteria 12227
84 Ga0207682_10007563 3300025893 Bacteria 4326
85 Ga0207680_10100458 3300025903 Bacteria 1858
86 Ga0207645_10008061 3300025907 Bacteria 7388
87 Ga0207645_10017304 3300025907 Bacteria 4761
88 Ga0207671_10021275 3300025914 Bacteria 4923
89 Ga0207660_10088345 3300025917 Bacteria 2292
90 Ga0207650_10001844 3300025925 Bacteria 14943
91 Ga0207650_10052798 3300025925 Bacteria 3012
92 Ga0207659_10006154 3300025926 Bacteria 7336
93 Ga0207687_10051739 3300025927 Bacteria 2864
94 Ga0207644_10012817 3300025931 Bacteria 5575
95 Ga0207644_10016585 3300025931 Bacteria 4958
96 Ga0207644_10041402 3300025931 Bacteria 3259
97 Ga0207644_10109265 3300025931 Bacteria 2089
98 Ga0207706_10005250 3300025933 Bacteria 12082
99 Ga0207670_10268872 3300025936 Bacteria 1324
100 Ga0207704_10011380 3300025938 Bacteria 4378
101 Ga0207691_10011992 3300025940 Bacteria 8313
102 Ga0207691_10071358 3300025940 Bacteria 3134
103 Ga0207711_10333874 3300025941 Bacteria 1402
104 Ga0207689_10126721 3300025942 Bacteria 2100
105 Ga0207689_10147842 3300025942 Bacteria 1936
106 Ga0207651_10002198 3300025960 Bacteria 9237
107 Ga0207640_10009314 3300025981 Bacteria 5493
108 Ga0207640_10219478 3300025981 Bacteria 1454
109 Ga0207677_10137773 3300026023 Bacteria 1864
110 Ga0207678_10159654 3300026067 Bacteria 1925
111 Ga0207641_10302123 3300026088 Bacteria 1512
112 Ga0207648_10000977 3300026089 Bacteria 32283
113 Ga0207648_10011553 3300026089 Bacteria 8314
114 Ga0207676_10011659 3300026095 Bacteria 6287
115 Ga0207676_10059380 3300026095 Bacteria 3020
116 Ga0207674_10007692 3300026116 Bacteria 12546
117 Ga0207674_10080629 3300026116 Bacteria 3257
118 Ga0207675_100447449 3300026118 Bacteria 1280
119 Ga0207683_10059987 3300026121 Bacteria 3343
120 Ga0207683_10208571 3300026121 Bacteria 1778
121 Ga0207698_10117575 3300026142 Bacteria 2243
122 Ga0207698_10356755 3300026142 Bacteria 1383
123 Ga0209281_1005889 3300027111 Bacteria 3292
124 Ga0209371_1000002 3300027312 Bacteria 1551985
125 Ga0209371_1020961 3300027312 Bacteria 1596
126 Ga0209968_1000552 3300027526 Bacteria 5848
127 Ga0209966_1000009 3300027695 Bacteria 86456
128 Ga0209813_10064868 3300027866 Bacteria 1174
129 Ga0207428_10075422 3300027907 Bacteria 2643
130 Ga0307517_10000590 3300028786 Bacteria 61880
131 Ga0307517_10021117 3300028786 Bacteria 8252
132 Ga0307515_10000011 3300028794 Bacteria 633903
133 Ga0307515_10187907 3300028794 Bacteria 1988
134 Ga0307515_10231918 3300028794 Bacteria 1636
135 Ga0268256_1000002 3300030500 Bacteria 1535763
136 Ga0268256_1015069 3300030500 Bacteria 2271
137 Ga0307512_10012807 3300030522 Bacteria 7892
138 Ga0265328_10014970 3300031239 Bacteria 3046
139 Ga0265327_10000438 3300031251 Bacteria 75623
140 Ga0265327_10001139 3300031251 Bacteria 36374
141 Ga0307509_10004827 3300031507 Bacteria 19164
142 Ga0307408_100058608 3300031548 Bacteria 2800
143 Ga0307408_100506878 3300031548 Bacteria 1057
144 Ga0307508_10005632 3300031616 Bacteria 11871
145 Ga0307508_10164766 3300031616 Bacteria 1820
146 Ga0307514_10191618 3300031649 Bacteria 1301
147 Ga0316576_10212340 3300031727 Bacteria 1456
148 Ga0316576_10215690 3300031727 Bacteria 1444
149 Ga0316576_10240192 3300031727 Viruses 1361
150 Ga0307516_10001919 3300031730 Bacteria 28473
151 Ga0307405_10013128 3300031731 Bacteria 4411
152 Ga0307413_10028021 3300031824 Bacteria 3130
153 Ga0307518_10026353 3300031838 Bacteria 4193
154 Ga0307410_10243792 3300031852 Bacteria 1394
155 Ga0307412_10116665 3300031911 Bacteria 1916
156 Ga0307409_100052188 3300031995 Bacteria 3133
157 Ga0307409_100384031 3300031995 Bacteria 1336
158 Ga0307414_10001318 3300032004 Bacteria 12827
159 Ga0307414_10016933 3300032004 Bacteria 4448
160 Ga0307411_10001089 3300032005 Bacteria 10557
161 Ga0307415_100018285 3300032126 Bacteria 4228
162 Ga0307510_10000578 3300033180 Bacteria 36983
163 Ga0307510_10042545 3300033180 Bacteria 4948
164 Ga0373931_0075743 3300035691 Bacteria 1846
165 Ga0316584_0207143 3300036712 Viruses 1445
166 Ga0395905_0001631 3300037471 Bacteria 26608
167 Ga0395905_0308266 3300037471 Bacteria 1471
168 Ga0436365_0965775 3300039437 Bacteria 470291
169 Ga0439447_013488 3300041407 Bacteria 2316
170 Ga0439466_0000533 3300041411 Bacteria 14383
171 Ga0451849_0092013 3300041505 Bacteria 1470
172 Ga0439432_016751 3300042006 Bacteria 2465
173 Ga0439432_029280 3300042006 Bacteria 1791
174 Ga0439451_000087 3300042009 Bacteria 16419
175 Ga0439452_003457 3300042010 Bacteria 5522
176 Ga0439456_002093 3300042013 Bacteria 4021
177 Ga0450902_002407 3300042137 Bacteria 2650
178 Ga0439458_0020768 3300042157 Bacteria 1518
179 Ga0466969_0000093 3300044656 Bacteria 46242
180 Ga0466966_0037967 3300044684 Bacteria 3104
181 Ga0466961_0029750 3300044693 Bacteria 3509
182 Ga0466963_0395348 3300044694 Bacteria 975
183 Ga0466968_0073910 3300044735 Bacteria 1488
184 Ga0495617_083875 3300046452 Bacteria 1043
185 Ga0495592_0000525 3300046454 Bacteria 27628
186 Ga0495591_001139 3300046458 Bacteria 17500
187 Ga0495591_029862 3300046458 Bacteria 1651
188 Ga0495638_0223781 3300046460 Bacteria 1050
189 Ga0495650_0003653 3300046471 Bacteria 11041
190 Ga0495650_0003875 3300046471 Bacteria 10591
191 Ga0495605_0054303 3300046474 Bacteria 1941
192 Ga0495607_0016634 3300046501 Bacteria 4744
193 Ga0495606_0016805 3300046507 Bacteria 5560
194 Ga0495610_0014764 3300046512 Bacteria 4573
195 Ga0495632_0013256 3300046519 Bacteria 4712
196 Ga0495632_0147286 3300046519 Bacteria 1090
197 Ga0495637_0000801 3300046520 Bacteria 20905
198 Ga0495637_0000929 3300046520 Bacteria 18749
199 Ga0495648_0004254 3300046524 Bacteria 12281
200 Ga0495666_0000223 3300046526 Bacteria 24132
201 Ga0495654_0057938 3300046530 Bacteria 1870
202 Ga0495586_0086679 3300046535 Bacteria 1726
203 Ga0495597_0044007 3300046542 Bacteria 1986
204 Ga0495668_0051074 3300046616 Bacteria 2290
205 Ga0495634_0158228 3300046642 Bacteria 1430
206 Ga0495611_0012564 3300046648 Bacteria 3600
207 Ga0495625_0017583 3300046660 Bacteria 5595
208 Ga0495625_0196151 3300046660 Bacteria 1335
209 Ga0495671_0108582 3300046692 Bacteria 1355
210 Ga0495649_0000504 3300046694 Bacteria 33380
211 Ga0495649_0001320 3300046694 Bacteria 18917
212 Ga0495649_0006311 3300046694 Bacteria 7378
213 Ga0495660_0001190 3300046810 Bacteria 18276
214 Ga0495604_0195281 3300047317 Bacteria 1407
215 Ga0495680_0002585 3300047322 Bacteria 18426
216 Ga0495673_0001030 3300047469 Bacteria 24579
217 Ga0495673_0005480 3300047469 Bacteria 7665
218 Ga0495681_0000304 3300047470 Bacteria 39427
219 Ga0495684_0014354 3300047471 Bacteria 6095
220 Ga0495626_0069579 3300048091 Bacteria 1585
221 Ga0496104_0007448 3300048907 Bacteria 9672
222 Ga0496105_0104110 3300048908 Bacteria 2344
223 Ga0496106_0013352 3300048909 Bacteria 6064
224 Ga0496117_0038276 3300048920 Bacteria 3560
225 Ga0496118_0002267 3300048921 Bacteria 26301
226 Ga0496119_0000352 3300048922 Bacteria 64461
227 Ga0496120_0000673 3300048923 Bacteria 50130
228 Ga0496121_0071568 3300048924 Bacteria 2788
229 Ga0496122_0000088 3300048925 Bacteria 207600
230 Ga0496122_0057635 3300048925 Bacteria 2883
231 Ga0496122_0110964 3300048925 Bacteria 1800
232 Ga0496123_0000139 3300048926 Bacteria 151469
233 Ga0496123_0000945 3300048926 Bacteria 45308
234 Ga0496123_0047666 3300048926 Bacteria 2892
235 Ga0496125_0048100 3300048928 Bacteria 3560
236 Ga0496126_0039063 3300048929 Bacteria 4408
237 Ga0496126_0062969 3300048929 Bacteria 3326
238 Ga0495678_009803 3300049459 Bacteria 4704
239 Ga0501031_0199717 3300049568 Bacteria 1305
240 Ga0501032_0030997 3300049569 Bacteria 3667
241 Ga0501039_0410857 3300049575 Unclassified 1063
242 Ga0501072_0055583 3300049588 Bacteria 3120
243 Ga0501076_0276894 3300049592 Bacteria 1374
244 Ga0501035_0080312 3300049822 Bacteria 2880
245 Ga0501044_0147498 3300049823 Bacteria 2337
246 nmdc:mga03n38_6416_c1 3300050490 Bacteria 4084
247 nmdc:mga0k408_10575_c1 3300050493 Bacteria 4996
248 nmdc:mga0k408_138_c1 3300050493 Bacteria 36717
249 nmdc:mga0k408_8903_c1 3300050493 Bacteria 5401
250 nmdc:mga06z11_28867_c1 3300050494 Bacteria 2666
251 nmdc:mga06z11_37422_c1 3300050494 Bacteria 2403
252 nmdc:mga06z11_6782_c1 3300050494 Bacteria 4679
253 nmdc:mga07m45_3308_c1 3300050496 Bacteria 7762
254 nmdc:mga07m45_63287_c1 3300050496 Bacteria 2098
255 nmdc:mga07m45_93164_c1 3300050496 Bacteria 1727
256 nmdc:mga07m45_965_c1 3300050496 Bacteria 12647
257 nmdc:mga08y16_26196_c1 3300050511 Bacteria 6149
258 nmdc:mga0n895_164457_c1 3300050512 Bacteria 2250
259 nmdc:mga0n895_19507_c1 3300050512 Bacteria 6304
260 nmdc:mga0rr50_62791_c1 3300050513 Bacteria 2804
261 nmdc:mga0sz30_26182_c1 3300050516 Bacteria 2389
262 Ga0500644_0007535 3300053088 Bacteria 2836
263 Ga0500594_0001108 3300053118 Bacteria 5776
264 Ga0500559_0000079 3300053136 Bacteria 75437
265 Ga0500568_0004539 3300053139 Bacteria 7403
266 Ga0500619_073371 3300053154 Bacteria 1141
267 Ga0500622_0001104 3300053156 Bacteria 22463
268 Ga0500636_0083938 3300053177 Bacteria 1832
269 Ga0501082_0133962 3300060353 Bacteria 2150
270 Ga0466962_0104009 3300061719 Bacteria 1364

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006914 Ga0075436_100114349 Ga0075436_1001143493 240
2 3300007076 Ga0075435_100013421 Ga0075435_1000134216 246
3 3300050512 nmdc:mga0n895_19507_c1 nmdc:mga0n895_19507_c1_944_1720 246
4 3300050513 nmdc:mga0rr50_62791_c1 nmdc:mga0rr50_62791_c1_329_1105 246
5 3300041411 Ga0439466_0000533 Ga0439466_0000533_13557_14351 250
6 3300031548 Ga0307408_100506878 Ga0307408_1005068782 257
7 3300031911 Ga0307412_10116665 Ga0307412_101166652 257
8 3300006042 Ga0075368_10046372 Ga0075368_100463722 259
9 3300006195 Ga0075366_10012313 Ga0075366_100123132 259
10 3300006195 Ga0075366_10015546 Ga0075366_100155462 259
11 3300006353 Ga0075370_10031052 Ga0075370_100310522 259
12 3300027866 Ga0209813_10064868 Ga0209813_100648681 259
13 3300050493 nmdc:mga0k408_10575_c1 nmdc:mga0k408_10575_c1_2977_3873 259
14 3300050494 nmdc:mga06z11_6782_c1 nmdc:mga06z11_6782_c1_1408_2304 259
15 3300050496 nmdc:mga07m45_3308_c1 nmdc:mga07m45_3308_c1_6432_7328 259
16 3300009094 Ga0111539_10608992 Ga0111539_106089922 262
17 3300025917 Ga0207660_10088345 Ga0207660_100883452 262
18 3300050512 nmdc:mga0n895_164457_c1 nmdc:mga0n895_164457_c1_501_1328 262
19 3300005842 Ga0068858_100228347 Ga0068858_1002283472 268
20 3300006038 Ga0075365_10006753 Ga0075365_100067534 268
21 3300006042 Ga0075368_10001189 Ga0075368_100011895 268
22 3300006048 Ga0075363_100000237 Ga0075363_1000002375 268
23 3300049575 Ga0501039_0410857 Ga0501039_0410857_179_1030 268
24 3300049588 Ga0501072_0055583 Ga0501072_0055583_1713_2597 268
25 3300049592 Ga0501076_0276894 Ga0501076_0276894_198_1082 268
26 3300050490 nmdc:mga03n38_6416_c1 nmdc:mga03n38_6416_c1_1479_2375 268
27 3300005577 Ga0068857_100487811 Ga0068857_1004878112 271
28 3300005617 Ga0068859_100063075 Ga0068859_1000630753 271
29 3300006931 Ga0097620_100063074 Ga0097620_1000630743 271
30 3300009094 Ga0111539_10028815 Ga0111539_100288154 271
31 3300009553 Ga0105249_10110467 Ga0105249_101104674 271
32 3300025936 Ga0207670_10268872 Ga0207670_102688722 271
33 3300027907 Ga0207428_10075422 Ga0207428_100754222 271
34 3300050511 nmdc:mga08y16_26196_c1 nmdc:mga08y16_26196_c1_3399_4253 271
35 3300005328 Ga0070676_10112233 Ga0070676_101122332 274
36 3300006195 Ga0075366_10016815 Ga0075366_100168154 274
37 3300006195 Ga0075366_10038699 Ga0075366_100386992 274
38 3300009553 Ga0105249_10192863 Ga0105249_101928632 274
39 3300041505 Ga0451849_0092013 Ga0451849_0092013_122_1018 274
40 3300050493 nmdc:mga0k408_8903_c1 nmdc:mga0k408_8903_c1_803_1699 274
41 3300028786 Ga0307517_10021117 Ga0307517_100211173 275
42 3300031727 Ga0316576_10240192 Ga0316576_102401921 276
43 3300036712 Ga0316584_0207143 Ga0316584_0207143_430_1335 276
44 3300046519 Ga0495632_0013256 Ga0495632_0013256_3451_4347 276
45 3300046542 Ga0495597_0044007 Ga0495597_0044007_193_1089 276
46 3300046660 Ga0495625_0196151 Ga0495625_0196151_396_1292 276
47 3300046694 Ga0495649_0006311 Ga0495649_0006311_3869_4765 276
48 3300048091 Ga0495626_0069579 Ga0495626_0069579_620_1516 276
49 iso_pu_bacteria 2739367655 2739611398 277
50 3300027526 Ga0209968_1000552 Ga0209968_10005524 278
51 3300027695 Ga0209966_1000009 Ga0209966_100000948 278
52 3300049568 Ga0501031_0199717 Ga0501031_0199717_200_1123 278
53 3300049823 Ga0501044_0147498 Ga0501044_0147498_118_996 278
54 3300060353 Ga0501082_0133962 Ga0501082_0133962_963_1886 278
55 iso_pu_bacteria 2574179768 2574431835 278
56 iso_pu_bacteria 2600255256 2601534816 279
57 iso_pu_bacteria 2600255257 2601539555 279
58 iso_pu_bacteria 2600255310 2601757905 279
59 iso_pu_bacteria 2600255311 2601764263 279
60 iso_pu_bacteria 2609459761 2609909846 279
61 iso_pu_bacteria 2636415599 2637224266 279
62 iso_pu_bacteria 2775507074 2777020762 279
63 iso_pu_bacteria 2904513164 2904515586 279
64 iso_pu_bacteria 2904513164 2904515592 279
65 iso_pu_bacteria 2919108558 2919111261 279
66 iso_pu_bacteria 2969079654 2969081306 279
67 3300044656 Ga0466969_0000093 Ga0466969_0000093_6376_7254 280
68 3300044684 Ga0466966_0037967 Ga0466966_0037967_2046_2924 280
69 3300044693 Ga0466961_0029750 Ga0466961_0029750_494_1372 280
70 3300048925 Ga0496122_0110964 Ga0496122_0110964_80_961 280
71 3300048926 Ga0496123_0000945 Ga0496123_0000945_38016_38897 280
72 3300006353 Ga0075370_10001038 Ga0075370_100010382 281
73 3300031727 Ga0316576_10212340 Ga0316576_102123402 281
74 3300037471 Ga0395905_0001631 Ga0395905_0001631_425_1309 281
75 3300044694 Ga0466963_0395348 Ga0466963_0395348_37_918 281
76 3300044735 Ga0466968_0073910 Ga0466968_0073910_180_1061 281
77 3300046471 Ga0495650_0003653 Ga0495650_0003653_8390_9307 281
78 3300050496 nmdc:mga07m45_965_c1 nmdc:mga07m45_965_c1_3857_4738 281
79 3300061719 Ga0466962_0104009 Ga0466962_0104009_272_1153 281
80 3300003856 Ga0058692_1000468 Ga0058692_100046814 283
81 3300006946 Ga0079104_1005610 Ga0079104_10056105 283
82 3300009036 Ga0105244_10001607 Ga0105244_1000160710 283
83 3300009092 Ga0105250_10000101 Ga0105250_1000010156 283
84 3300009092 Ga0105250_10001801 Ga0105250_100018012 283
85 3300013102 Ga0157371_10005686 Ga0157371_100056862 283
86 3300021384 Ga0213876_10000034 Ga0213876_1000003433 283
87 3300025711 Ga0207696_1000013 Ga0207696_1000013129 283
88 3300025711 Ga0207696_1001558 Ga0207696_10015588 283
89 3300027111 Ga0209281_1005889 Ga0209281_10058892 283
90 3300027312 Ga0209371_1000002 Ga0209371_10000021312 283
91 3300027312 Ga0209371_1020961 Ga0209371_10209612 283
92 3300030500 Ga0268256_1000002 Ga0268256_1000002150 283
93 3300030500 Ga0268256_1015069 Ga0268256_10150692 283
94 3300031507 Ga0307509_10004827 Ga0307509_100048276 283
95 3300032004 Ga0307414_10001318 Ga0307414_100013184 283
96 3300039437 Ga0436365_0965775 Ga0436365_0965775_308540_309430 283
97 3300041407 Ga0439447_013488 Ga0439447_013488_1202_2095 283
98 3300042006 Ga0439432_016751 Ga0439432_016751_1277_2170 283
99 3300042006 Ga0439432_029280 Ga0439432_029280_85_978 283
100 3300042009 Ga0439451_000087 Ga0439451_000087_524_1417 283
101 3300042010 Ga0439452_003457 Ga0439452_003457_555_1448 283
102 3300042013 Ga0439456_002093 Ga0439456_002093_3088_3981 283
103 3300042137 Ga0450902_002407 Ga0450902_002407_1374_2288 283
104 3300046452 Ga0495617_083875 Ga0495617_083875_81_974 283
105 3300046458 Ga0495591_001139 Ga0495591_001139_12628_13521 283
106 3300046458 Ga0495591_029862 Ga0495591_029862_245_1135 283
107 3300046471 Ga0495650_0003875 Ga0495650_0003875_1410_2300 283
108 3300046474 Ga0495605_0054303 Ga0495605_0054303_265_1158 283
109 3300046501 Ga0495607_0016634 Ga0495607_0016634_3474_4367 283
110 3300046507 Ga0495606_0016805 Ga0495606_0016805_1506_2399 283
111 3300046519 Ga0495632_0147286 Ga0495632_0147286_150_1043 283
112 3300046520 Ga0495637_0000801 Ga0495637_0000801_4026_4919 283
113 3300046520 Ga0495637_0000929 Ga0495637_0000929_3208_4101 283
114 3300046524 Ga0495648_0004254 Ga0495648_0004254_8956_9849 283
115 3300046526 Ga0495666_0000223 Ga0495666_0000223_3800_4693 283
116 3300046530 Ga0495654_0057938 Ga0495654_0057938_563_1456 283
117 3300046648 Ga0495611_0012564 Ga0495611_0012564_2064_2957 283
118 3300046692 Ga0495671_0108582 Ga0495671_0108582_276_1166 283
119 3300046694 Ga0495649_0000504 Ga0495649_0000504_27787_28677 283
120 3300046694 Ga0495649_0001320 Ga0495649_0001320_3267_4160 283
121 3300046810 Ga0495660_0001190 Ga0495660_0001190_3102_3995 283
122 3300047317 Ga0495604_0195281 Ga0495604_0195281_287_1180 283
123 3300047322 Ga0495680_0002585 Ga0495680_0002585_13664_14557 283
124 3300047469 Ga0495673_0001030 Ga0495673_0001030_19558_20451 283
125 3300047469 Ga0495673_0005480 Ga0495673_0005480_1925_2818 283
126 3300047470 Ga0495681_0000304 Ga0495681_0000304_20003_20896 283
127 3300047471 Ga0495684_0014354 Ga0495684_0014354_694_1587 283
128 3300048907 Ga0496104_0007448 Ga0496104_0007448_1783_2673 283
129 3300048908 Ga0496105_0104110 Ga0496105_0104110_564_1454 283
130 3300048920 Ga0496117_0038276 Ga0496117_0038276_73_963 283
131 3300048921 Ga0496118_0002267 Ga0496118_0002267_7280_8170 283
132 3300048922 Ga0496119_0000352 Ga0496119_0000352_53368_54258 283
133 3300048923 Ga0496120_0000673 Ga0496120_0000673_8368_9258 283
134 3300048925 Ga0496122_0000088 Ga0496122_0000088_33334_34224 283
135 3300048925 Ga0496122_0057635 Ga0496122_0057635_1393_2283 283
136 3300048926 Ga0496123_0000139 Ga0496123_0000139_117247_118137 283
137 3300048926 Ga0496123_0047666 Ga0496123_0047666_744_1634 283
138 3300048928 Ga0496125_0048100 Ga0496125_0048100_781_1671 283
139 3300048929 Ga0496126_0039063 Ga0496126_0039063_2648_3538 283
140 3300048929 Ga0496126_0062969 Ga0496126_0062969_1625_2515 283
141 3300049459 Ga0495678_009803 Ga0495678_009803_3702_4595 283
142 3300031727 Ga0316576_10215690 Ga0316576_102156901 284
143 3300005367 Ga0070667_100344182 Ga0070667_1003441821 285
144 3300028794 Ga0307515_10187907 Ga0307515_101879072 285
145 3300031251 Ga0265327_10000438 Ga0265327_1000043856 285
146 3300037471 Ga0395905_0308266 Ga0395905_0308266_124_1017 285
147 3300042157 Ga0439458_0020768 Ga0439458_0020768_107_1000 285
148 3300046535 Ga0495586_0086679 Ga0495586_0086679_480_1376 285
149 3300046642 Ga0495634_0158228 Ga0495634_0158228_12_914 285
150 3300048924 Ga0496121_0071568 Ga0496121_0071568_485_1381 285
151 3300049569 Ga0501032_0030997 Ga0501032_0030997_1495_2391 285
152 3300003322 rootL2_10059179 rootL2_100591791 286
153 3300005328 Ga0070676_10003628 Ga0070676_100036284 286
154 3300005328 Ga0070676_10019340 Ga0070676_100193402 286
155 3300005328 Ga0070676_10124045 Ga0070676_101240452 286
156 3300005331 Ga0070670_100007464 Ga0070670_1000074646 286
157 3300005334 Ga0068869_100096864 Ga0068869_1000968643 286
158 3300005334 Ga0068869_100233975 Ga0068869_1002339752 286
159 3300005338 Ga0068868_100074315 Ga0068868_1000743152 286
160 3300005338 Ga0068868_100075820 Ga0068868_1000758203 286
161 3300005347 Ga0070668_100096753 Ga0070668_1000967532 286
162 3300005354 Ga0070675_100013001 Ga0070675_1000130014 286
163 3300005354 Ga0070675_100304899 Ga0070675_1003048992 286
164 3300005355 Ga0070671_100007464 Ga0070671_1000074648 286
165 3300005355 Ga0070671_100026802 Ga0070671_1000268023 286
166 3300005356 Ga0070674_100177501 Ga0070674_1001775011 286
167 3300005364 Ga0070673_100059165 Ga0070673_1000591652 286
168 3300005364 Ga0070673_100152604 Ga0070673_1001526042 286
169 3300005367 Ga0070667_100156021 Ga0070667_1001560212 286
170 3300005456 Ga0070678_100014023 Ga0070678_1000140233 286
171 3300005457 Ga0070662_100017500 Ga0070662_1000175003 286
172 3300005457 Ga0070662_100306489 Ga0070662_1003064891 286
173 3300005459 Ga0068867_100004040 Ga0068867_1000040406 286
174 3300005459 Ga0068867_100022588 Ga0068867_1000225883 286
175 3300005459 Ga0068867_100036358 Ga0068867_1000363582 286
176 3300005467 Ga0070706_100000803 Ga0070706_10000080316 286
177 3300005471 Ga0070698_100228985 Ga0070698_1002289852 286
178 3300005518 Ga0070699_100055663 Ga0070699_1000556633 286
179 3300005543 Ga0070672_100004699 Ga0070672_1000046995 286
180 3300005543 Ga0070672_100041787 Ga0070672_1000417872 286
181 3300005548 Ga0070665_100027141 Ga0070665_1000271412 286
182 3300005548 Ga0070665_100069240 Ga0070665_1000692402 286
183 3300005563 Ga0068855_100364745 Ga0068855_1003647452 286
184 3300005578 Ga0068854_100062184 Ga0068854_1000621843 286
185 3300005616 Ga0068852_100310223 Ga0068852_1003102232 286
186 3300005617 Ga0068859_100027883 Ga0068859_1000278832 286
187 3300005618 Ga0068864_100027184 Ga0068864_1000271842 286
188 3300005834 Ga0068851_10091731 Ga0068851_100917312 286
189 3300005841 Ga0068863_100023453 Ga0068863_1000234535 286
190 3300006177 Ga0075362_10000372 Ga0075362_100003728 286
191 3300006178 Ga0075367_10009555 Ga0075367_100095551 286
192 3300006178 Ga0075367_10016300 Ga0075367_100163004 286
193 3300006195 Ga0075366_10060222 Ga0075366_100602222 286
194 3300006237 Ga0097621_100016738 Ga0097621_1000167382 286
195 3300006353 Ga0075370_10000108 Ga0075370_100001082 286
196 3300006353 Ga0075370_10058014 Ga0075370_100580142 286
197 3300006358 Ga0068871_100230037 Ga0068871_1002300372 286
198 3300006931 Ga0097620_100027883 Ga0097620_1000278832 286
199 3300009098 Ga0105245_10024461 Ga0105245_100244612 286
200 3300009545 Ga0105237_10008769 Ga0105237_100087699 286
201 3300010375 Ga0105239_10061120 Ga0105239_100611204 286
202 3300014968 Ga0157379_10245532 Ga0157379_102455321 286
203 3300025315 Ga0207697_10008374 Ga0207697_100083744 286
204 3300025893 Ga0207682_10007563 Ga0207682_100075634 286
205 3300025903 Ga0207680_10100458 Ga0207680_101004582 286
206 3300025907 Ga0207645_10008061 Ga0207645_100080612 286
207 3300025907 Ga0207645_10017304 Ga0207645_100173045 286
208 3300025914 Ga0207671_10021275 Ga0207671_100212752 286
209 3300025925 Ga0207650_10001844 Ga0207650_100018444 286
210 3300025925 Ga0207650_10052798 Ga0207650_100527982 286
211 3300025926 Ga0207659_10006154 Ga0207659_100061546 286
212 3300025927 Ga0207687_10051739 Ga0207687_100517394 286
213 3300025931 Ga0207644_10012817 Ga0207644_100128174 286
214 3300025931 Ga0207644_10016585 Ga0207644_100165855 286
215 3300025931 Ga0207644_10041402 Ga0207644_100414023 286
216 3300025931 Ga0207644_10109265 Ga0207644_101092652 286
217 3300025933 Ga0207706_10005250 Ga0207706_100052509 286
218 3300025938 Ga0207704_10011380 Ga0207704_100113802 286
219 3300025940 Ga0207691_10011992 Ga0207691_100119925 286
220 3300025940 Ga0207691_10071358 Ga0207691_100713582 286
221 3300025941 Ga0207711_10333874 Ga0207711_103338742 286
222 3300025942 Ga0207689_10126721 Ga0207689_101267212 286
223 3300025942 Ga0207689_10147842 Ga0207689_101478422 286
224 3300025960 Ga0207651_10002198 Ga0207651_100021984 286
225 3300025981 Ga0207640_10009314 Ga0207640_100093142 286
226 3300025981 Ga0207640_10219478 Ga0207640_102194782 286
227 3300026023 Ga0207677_10137773 Ga0207677_101377732 286
228 3300026067 Ga0207678_10159654 Ga0207678_101596542 286
229 3300026088 Ga0207641_10302123 Ga0207641_103021231 286
230 3300026089 Ga0207648_10000977 Ga0207648_1000097712 286
231 3300026089 Ga0207648_10011553 Ga0207648_100115535 286
232 3300026095 Ga0207676_10011659 Ga0207676_100116595 286
233 3300026095 Ga0207676_10059380 Ga0207676_100593804 286
234 3300026116 Ga0207674_10007692 Ga0207674_100076927 286
235 3300026116 Ga0207674_10080629 Ga0207674_100806293 286
236 3300026118 Ga0207675_100447449 Ga0207675_1004474492 286
237 3300026121 Ga0207683_10059987 Ga0207683_100599872 286
238 3300026121 Ga0207683_10208571 Ga0207683_102085712 286
239 3300026142 Ga0207698_10117575 Ga0207698_101175753 286
240 3300026142 Ga0207698_10356755 Ga0207698_103567552 286
241 3300028786 Ga0307517_10000590 Ga0307517_1000059070 286
242 3300028794 Ga0307515_10000011 Ga0307515_10000011442 286
243 3300028794 Ga0307515_10231918 Ga0307515_102319182 286
244 3300030522 Ga0307512_10012807 Ga0307512_100128075 286
245 3300031239 Ga0265328_10014970 Ga0265328_100149702 286
246 3300031251 Ga0265327_10001139 Ga0265327_1000113928 286
247 3300031548 Ga0307408_100058608 Ga0307408_1000586082 286
248 3300031616 Ga0307508_10005632 Ga0307508_100056322 286
249 3300031616 Ga0307508_10164766 Ga0307508_101647662 286
250 3300031649 Ga0307514_10191618 Ga0307514_101916182 286
251 3300031730 Ga0307516_10001919 Ga0307516_100019197 286
252 3300031731 Ga0307405_10013128 Ga0307405_100131283 286
253 3300031824 Ga0307413_10028021 Ga0307413_100280212 286
254 3300031838 Ga0307518_10026353 Ga0307518_100263532 286
255 3300031852 Ga0307410_10243792 Ga0307410_102437922 286
256 3300031995 Ga0307409_100052188 Ga0307409_1000521883 286
257 3300031995 Ga0307409_100384031 Ga0307409_1003840312 286
258 3300032004 Ga0307414_10016933 Ga0307414_100169333 286
259 3300032005 Ga0307411_10001089 Ga0307411_100010898 286
260 3300032126 Ga0307415_100018285 Ga0307415_1000182852 286
261 3300033180 Ga0307510_10000578 Ga0307510_1000057811 286
262 3300033180 Ga0307510_10042545 Ga0307510_100425452 286
263 3300035691 Ga0373931_0075743 Ga0373931_0075743_264_1160 286
264 3300046454 Ga0495592_0000525 Ga0495592_0000525_18262_19158 286
265 3300046460 Ga0495638_0223781 Ga0495638_0223781_94_990 286
266 3300046512 Ga0495610_0014764 Ga0495610_0014764_1510_2406 286
267 3300046616 Ga0495668_0051074 Ga0495668_0051074_79_975 286
268 3300046660 Ga0495625_0017583 Ga0495625_0017583_1695_2591 286
269 3300048909 Ga0496106_0013352 Ga0496106_0013352_4574_5491 286
270 3300049822 Ga0501035_0080312 Ga0501035_0080312_415_1314 286
271 3300050493 nmdc:mga0k408_138_c1 nmdc:mga0k408_138_c1_3961_4857 286
272 3300050494 nmdc:mga06z11_28867_c1 nmdc:mga06z11_28867_c1_993_1889 286
273 3300050494 nmdc:mga06z11_37422_c1 nmdc:mga06z11_37422_c1_1322_2218 286
274 3300050496 nmdc:mga07m45_63287_c1 nmdc:mga07m45_63287_c1_332_1228 286
275 3300050496 nmdc:mga07m45_93164_c1 nmdc:mga07m45_93164_c1_426_1325 286
276 3300050516 nmdc:mga0sz30_26182_c1 nmdc:mga0sz30_26182_c1_214_1131 286
277 3300053088 Ga0500644_0007535 Ga0500644_0007535_93_989 286
278 3300053118 Ga0500594_0001108 Ga0500594_0001108_2035_2931 286
279 3300053136 Ga0500559_0000079 Ga0500559_0000079_30574_31470 286
280 3300053139 Ga0500568_0004539 Ga0500568_0004539_1636_2532 286
281 3300053154 Ga0500619_073371 Ga0500619_073371_142_1038 286
282 3300053156 Ga0500622_0001104 Ga0500622_0001104_4018_4914 286
283 3300053177 Ga0500636_0083938 Ga0500636_0083938_28_924 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

8

305

0.99

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

42

166

0.92

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

10

190

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ctr-assembly4.cif.gz_D crystal structure of dtdp-4-dehydrorhamnose reductase from klebsiella pneumoniae with bound nadp 0.9563 1 285
1kbz-assembly1.cif.gz_A crystal structure of apo-dtdp-6-deoxy-l-lyxo-4-hexulose reductase (rmld) from salmonella enterica serovar typhimurium 0.9501 1 285
8ctr-assembly4.cif.gz_D crystal structure of dtdp-4-dehydrorhamnose reductase from klebsiella pneumoniae with bound nadp 0.9497 1 285
1kbz-assembly1.cif.gz_A crystal structure of apo-dtdp-6-deoxy-l-lyxo-4-hexulose reductase (rmld) from salmonella enterica serovar typhimurium 0.9436 1 285
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.8707 1 286
ID Description Score Start End Superfamily
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9519 1 285 3.40.50.720
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9453 1 285 3.40.50.720
1n2sA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8879 1 271 3.40.50.720
1n2sA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8838 1 271 3.40.50.720
af_A0A1D6HPY3_156_346_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8605 96 284 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q3TB75-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.988 90 284 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A4Q3KAP5-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9829 72 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A4Q3TB75-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9731 90 284 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A1H3GVN8-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9679 1 284 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A191ZFF9-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9671 1 284 GO:0005829
GO:0008831
GO:0009243
GO:0019305
GO:0045226

Feature Viewer

pLDDT pTM Quality
92.98 0.9 High
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Predicted Structure (AlphaFold2)

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