F385405

General Info

Members Datasets Scaffolds Average Seq Length
283 201 566 158

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100088477|Ga0070714_1000884772
Length 176
Sequence MKIGIAADHGGYEMKQKIYILLNAKGHKVVDFGNLQFDRDDDYPDFAIPLARAVADGVVERGVLLCGSGIGASIAANRVDGVRAAVCHDDFSARQGVEDDDMNILCLGGLTTGVAVAWNCVKSFLAAKFSGAERHRRRLAKVSAIHTIRPLSTAFQLFTSLEKPRCNSRETVRLKE

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
123 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
124 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
125 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
126 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
127 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
128 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
129 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
130 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
131 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
132 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
133 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
134 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
135 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
136 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
137 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
138 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
139 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
140 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
141 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
142 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
143 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
144 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
145 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
146 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
148 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
149 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
150 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
156 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
157 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
158 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
159 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
160 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
161 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
162 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
163 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
164 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
165 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
166 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
167 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
168 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
169 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
170 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
171 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
172 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
173 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
174 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
175 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
176 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
177 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
178 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
179 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
180 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
181 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
182 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
183 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
184 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
185 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
186 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
187 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
188 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
189 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
190 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
191 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
192 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
196 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
197 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
198 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
199 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
200 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
201 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.06
Nodule 0
Rhizoplane 3.18
Rhizosphere 93.99
Stem 0
Stem Tuber 0
Unclassified 20.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100088477 3300005435 Bacteria 2710
2 rootH2_10090046 3300003320 Unclassified 1706
3 Ga0070676_10061037 3300005328 Bacteria 2240
4 Ga0070676_10113285 3300005328 Unclassified 1692
5 Ga0070676_10525869 3300005328 Bacteria 843
6 Ga0070683_100625227 3300005329 Unclassified 1031
7 Ga0070683_100979869 3300005329 Unclassified 811
8 Ga0070666_10065094 3300005335 Bacteria 2473
9 Ga0070680_100341004 3300005336 Unclassified 1273
10 Ga0068868_100032743 3300005338 Bacteria 4000
11 Ga0070660_100017986 3300005339 Bacteria 5158
12 Ga0070668_100036545 3300005347 Bacteria 3749
13 Ga0070669_100167801 3300005353 Unclassified 1710
14 Ga0070675_101260819 3300005354 Bacteria 681
15 Ga0070671_101714197 3300005355 Bacteria 558
16 Ga0070674_100458601 3300005356 Bacteria 1053
17 Ga0070659_100002023 3300005366 Bacteria 14496
18 Ga0070667_100610487 3300005367 Unclassified 1005
19 Ga0070667_101218355 3300005367 Unclassified 705
20 Ga0070709_10211295 3300005434 Bacteria 1379
21 Ga0070709_10833498 3300005434 Bacteria 726
22 Ga0070714_100200634 3300005435 Bacteria 1824
23 Ga0070713_100991538 3300005436 Bacteria 810
24 Ga0070710_10137613 3300005437 Bacteria 1494
25 Ga0070711_100787558 3300005439 Unclassified 806
26 Ga0070708_100004452 3300005445 Bacteria 11019
27 Ga0070708_100098114 3300005445 Bacteria 2679
28 Ga0070708_100916503 3300005445 Bacteria 823
29 Ga0070678_100165397 3300005456 Bacteria 1796
30 Ga0070662_100028766 3300005457 Bacteria 3871
31 Ga0070681_10154341 3300005458 Bacteria 2221
32 Ga0070706_100036663 3300005467 Bacteria 4530
33 Ga0070707_100056229 3300005468 Bacteria 3774
34 Ga0070707_100576427 3300005468 Bacteria 1088
35 Ga0070699_100849324 3300005518 Bacteria 836
36 Ga0070679_101294794 3300005530 Unclassified 674
37 Ga0070684_100772745 3300005535 Unclassified 897
38 Ga0070696_100295673 3300005546 Bacteria 1239
39 Ga0070693_100661277 3300005547 Bacteria 761
40 Ga0070665_100217816 3300005548 Bacteria 1910
41 Ga0070665_100298951 3300005548 Bacteria 1612
42 Ga0068855_100025833 3300005563 Bacteria 7023
43 Ga0070664_100184279 3300005564 Bacteria 1857
44 Ga0070664_100536123 3300005564 Bacteria 1081
45 Ga0068857_100477146 3300005577 Bacteria 1168
46 Ga0068856_100057826 3300005614 Bacteria 3829
47 Ga0068859_100231345 3300005617 Bacteria 1937
48 Ga0068859_100317024 3300005617 Bacteria 1653
49 Ga0068861_100007481 3300005719 Bacteria 7487
50 Ga0068858_100086542 3300005842 Bacteria 2915
51 Ga0068862_100099931 3300005844 Bacteria 2537
52 Ga0081455_10017720 3300005937 Bacteria 6814
53 Ga0081455_10195097 3300005937 Bacteria 1521
54 Ga0070717_10112564 3300006028 Bacteria 2323
55 Ga0070717_10190514 3300006028 Bacteria 1792
56 Ga0070715_10193903 3300006163 Bacteria 1027
57 Ga0070715_10549888 3300006163 Unclassified 669
58 Ga0070712_100068151 3300006175 Bacteria 2534
59 Ga0070712_100411031 3300006175 Bacteria 1120
60 Ga0070712_100490615 3300006175 Unclassified 1028
61 Ga0070712_100679616 3300006175 Bacteria 876
62 Ga0075433_11151333 3300006852 Bacteria 674
63 Ga0068865_100332633 3300006881 Bacteria 1225
64 Ga0075436_100321400 3300006914 Unclassified 1112
65 Ga0097620_100231342 3300006931 Bacteria 1937
66 Ga0097620_100317005 3300006931 Bacteria 1653
67 Ga0075435_100724383 3300007076 Bacteria 865
68 Ga0105240_10023391 3300009093 Bacteria 8171
69 Ga0111539_10476700 3300009094 Bacteria 1453
70 Ga0105245_10002549 3300009098 Bacteria 16409
71 Ga0105243_10564473 3300009148 Unclassified 1090
72 Ga0105241_10015884 3300009174 Bacteria 5515
73 Ga0105242_10842862 3300009176 Bacteria 911
74 Ga0105242_12233215 3300009176 Unclassified 593
75 Ga0105248_10045577 3300009177 Bacteria 4916
76 Ga0105248_10089988 3300009177 Bacteria 3455
77 Ga0105248_11808646 3300009177 Unclassified 693
78 Ga0105237_10017326 3300009545 Bacteria 7470
79 Ga0105237_11425983 3300009545 Bacteria 699
80 Ga0105238_10040542 3300009551 Bacteria 4718
81 Ga0105238_10101327 3300009551 Bacteria 2862
82 Ga0105249_10036264 3300009553 Bacteria 4473
83 Ga0099796_10415226 3300010159 Unclassified 592
84 Ga0105239_10008125 3300010375 Bacteria 11980
85 Ga0157373_10115553 3300013100 Bacteria 1886
86 Ga0157373_10150937 3300013100 Bacteria 1634
87 Ga0157371_10272089 3300013102 Unclassified 1223
88 Ga0157371_10663044 3300013102 Bacteria 779
89 Ga0157370_10179309 3300013104 Bacteria 1969
90 Ga0157370_10255826 3300013104 Bacteria 1619
91 Ga0157369_10059333 3300013105 Bacteria 4126
92 Ga0157369_10642124 3300013105 Bacteria 1095
93 Ga0157369_10784717 3300013105 Bacteria 979
94 Ga0157374_10006418 3300013296 Bacteria 9986
95 Ga0157374_10270369 3300013296 Bacteria 1676
96 Ga0157374_10810352 3300013296 Unclassified 952
97 Ga0157374_10947737 3300013296 Bacteria 879
98 Ga0157378_10017509 3300013297 Bacteria 6290
99 Ga0157378_10225509 3300013297 Bacteria 1783
100 Ga0157378_10414408 3300013297 Unclassified 1330
101 Ga0163162_10005432 3300013306 Bacteria 12317
102 Ga0157372_10122291 3300013307 Bacteria 2991
103 Ga0157375_10066679 3300013308 Bacteria 3595
104 Ga0157375_10238718 3300013308 Bacteria 1977
105 Ga0157375_10259624 3300013308 Bacteria 1899
106 Ga0163163_11949028 3300014325 Unclassified 647
107 Ga0157380_13305643 3300014326 Bacteria 515
108 Ga0157376_11097213 3300014969 Unclassified 821
109 Ga0157376_12038899 3300014969 Bacteria 612
110 Ga0182006_1000160 3300015261 Bacteria 71698
111 Ga0213876_10000089 3300021384 Bacteria 104386
112 Ga0207697_10012149 3300025315 Bacteria 3621
113 Ga0207642_10103132 3300025899 Bacteria 1436
114 Ga0207688_10001602 3300025901 Bacteria 11948
115 Ga0207680_10907711 3300025903 Unclassified 631
116 Ga0207685_10291485 3300025905 Bacteria 804
117 Ga0207685_10322071 3300025905 Unclassified 771
118 Ga0207685_10362162 3300025905 Bacteria 734
119 Ga0207699_10155307 3300025906 Bacteria 1518
120 Ga0207645_10046715 3300025907 Bacteria 2765
121 Ga0207645_10309122 3300025907 Unclassified 1053
122 Ga0207654_10002328 3300025911 Bacteria 9753
123 Ga0207707_10351707 3300025912 Bacteria 1269
124 Ga0207695_10942891 3300025913 Bacteria 743
125 Ga0207671_10020783 3300025914 Bacteria 4993
126 Ga0207693_10146487 3300025915 Bacteria 1857
127 Ga0207693_10503960 3300025915 Unclassified 945
128 Ga0207693_10818549 3300025915 Bacteria 717
129 Ga0207663_10128288 3300025916 Bacteria 1748
130 Ga0207660_10051407 3300025917 Bacteria 2929
131 Ga0207660_10197883 3300025917 Unclassified 1568
132 Ga0207657_10029263 3300025919 Bacteria 5016
133 Ga0207657_10277754 3300025919 Bacteria 1330
134 Ga0207652_10006029 3300025921 Bacteria 9813
135 Ga0207652_10287831 3300025921 Bacteria 1482
136 Ga0207646_10036110 3300025922 Bacteria 4462
137 Ga0207681_10038822 3300025923 Bacteria 3158
138 Ga0207694_10119250 3300025924 Bacteria 2105
139 Ga0207694_10167801 3300025924 Bacteria 1776
140 Ga0207659_10112731 3300025926 Bacteria 2070
141 Ga0207659_10133551 3300025926 Bacteria 1919
142 Ga0207659_10338729 3300025926 Unclassified 1245
143 Ga0207687_10011632 3300025927 Bacteria 5752
144 Ga0207687_10180161 3300025927 Unclassified 1636
145 Ga0207700_10290225 3300025928 Bacteria 1410
146 Ga0207664_10339787 3300025929 Bacteria 1327
147 Ga0207644_10080305 3300025931 Unclassified 2409
148 Ga0207644_10133369 3300025931 Bacteria 1904
149 Ga0207690_10001524 3300025932 Bacteria 14496
150 Ga0207706_10016653 3300025933 Bacteria 6634
151 Ga0207706_10332877 3300025933 Bacteria 1321
152 Ga0207709_10732530 3300025935 Bacteria 793
153 Ga0207669_11470598 3300025937 Unclassified 581
154 Ga0207704_10774217 3300025938 Unclassified 800
155 Ga0207665_10069826 3300025939 Bacteria 2396
156 Ga0207665_10079674 3300025939 Bacteria 2251
157 Ga0207665_10438096 3300025939 Unclassified 1001
158 Ga0207691_10013530 3300025940 Bacteria 7804
159 Ga0207711_10064305 3300025941 Bacteria 3169
160 Ga0207711_10150435 3300025941 Bacteria 2100
161 Ga0207689_10580489 3300025942 Unclassified 942
162 Ga0207661_10539840 3300025944 Unclassified 1068
163 Ga0207679_10071504 3300025945 Bacteria 2617
164 Ga0207667_10101582 3300025949 Bacteria 2966
165 Ga0207668_10116202 3300025972 Bacteria 2017
166 Ga0207658_11057866 3300025986 Unclassified 741
167 Ga0207658_11291783 3300025986 Bacteria 667
168 Ga0207677_10140934 3300026023 Bacteria 1846
169 Ga0207677_10266696 3300026023 Unclassified 1398
170 Ga0207677_10480959 3300026023 Unclassified 1070
171 Ga0207703_10890313 3300026035 Bacteria 852
172 Ga0207703_11137814 3300026035 Unclassified 750
173 Ga0207702_10038009 3300026078 Bacteria 4032
174 Ga0207702_10078820 3300026078 Bacteria 2853
175 Ga0207702_10250940 3300026078 Bacteria 1662
176 Ga0207648_10467746 3300026089 Bacteria 1150
177 Ga0207674_10714427 3300026116 Bacteria 967
178 Ga0207675_100013096 3300026118 Bacteria 7739
179 Ga0207675_100577003 3300026118 Bacteria 1126
180 Ga0207683_10122498 3300026121 Bacteria 2335
181 Ga0268266_10291420 3300028379 Bacteria 1520
182 Ga0268266_10854248 3300028379 Unclassified 880
183 Ga0268264_10256236 3300028381 Bacteria 1628
184 Ga0268264_10610191 3300028381 Unclassified 1076
185 Ga0265337_1001121 3300028556 Bacteria 13705
186 Ga0265326_10015197 3300028558 Bacteria 2237
187 Ga0265336_10000399 3300028666 Bacteria 27286
188 Ga0265338_10000096 3300028800 Bacteria 164859
189 Ga0265338_10010354 3300028800 Bacteria 10949
190 Ga0265320_10013856 3300031240 Bacteria 4620
191 Ga0265325_10030516 3300031241 Unclassified 2890
192 Ga0265325_10032960 3300031241 Bacteria 2763
193 Ga0265339_10444040 3300031249 Unclassified 603
194 Ga0265331_10011702 3300031250 Bacteria 4795
195 Ga0265316_10005880 3300031344 Bacteria 11824
196 Ga0265314_10037132 3300031711 Bacteria 3533
197 Ga0265342_10059500 3300031712 Bacteria 2257
198 Ga0307414_10050978 3300032004 Bacteria 2870
199 Ga0373930_0053360 3300034816 Bacteria 888
200 Ga0373959_0120469 3300034820 Bacteria 641
201 Ga0373928_0000979 3300035084 Bacteria 5596
202 Ga0373944_0031737 3300035089 Bacteria 1592
203 Ga0373939_0273549 3300035114 Unclassified 665
204 Ga0373954_0034372 3300035118 Bacteria 2348
205 Ga0373943_0131205 3300035170 Unclassified 1341
206 Ga0373955_0063455 3300035172 Bacteria 2046
207 Ga0373955_0102508 3300035172 Bacteria 1645
208 Ga0373955_0281395 3300035172 Bacteria 1001
209 Ga0373931_0020277 3300035691 Bacteria 3324
210 Ga0373935_0379688 3300035692 Unclassified 1012
211 Ga0373947_0123071 3300035725 Bacteria 1649
212 Ga0373947_0124695 3300035725 Bacteria 1639
213 Ga0373937_0329056 3300036401 Bacteria 1446
214 Ga0373937_1264127 3300036401 Bacteria 686
215 Ga0373925_0196882 3300037068 Bacteria 1601
216 Ga0395898_1888034 3300037466 Unclassified 518
217 Ga0436365_0083436 3300039437 Unclassified 676
218 Ga0436365_1738066 3300039437 Bacteria 103785
219 Ga0436363_0910802 3300039450 Bacteria 1480
220 Ga0439460_0002613 3300042461 Bacteria 4353
221 Ga0451577_0088995 3300042876 Bacteria 2755
222 Ga0453683_0371130 3300044673 Bacteria 920
223 Ga0453684_1106391 3300044712 Bacteria 837
224 Ga0451576_0054175 3300045051 Bacteria 4200
225 Ga0451576_0322077 3300045051 Bacteria 1618
226 Ga0495592_0210249 3300046454 Bacteria 1307
227 Ga0495629_0213060 3300046459 Bacteria 1334
228 Ga0495651_0465621 3300046462 Bacteria 814
229 Ga0495653_0005248 3300046463 Bacteria 10538
230 Ga0495580_0050693 3300046472 Bacteria 2935
231 Ga0495662_0469414 3300046476 Bacteria 617
232 Ga0495608_0014161 3300046511 Bacteria 5533
233 Ga0495618_0016858 3300046514 Bacteria 4475
234 Ga0495630_0006409 3300046517 Bacteria 8372
235 Ga0495630_0550388 3300046517 Unclassified 885
236 Ga0495652_0173821 3300046529 Bacteria 1660
237 Ga0495652_0579566 3300046529 Unclassified 768
238 Ga0495665_0040825 3300046531 Bacteria 2470
239 Ga0495640_0188071 3300046533 Bacteria 1313
240 Ga0495640_0247005 3300046533 Bacteria 1119
241 Ga0495586_0005030 3300046535 Bacteria 7076
242 Ga0495587_0020909 3300046536 Bacteria 4037
243 Ga0495587_0269855 3300046536 Bacteria 955
244 Ga0495645_0017511 3300046543 Bacteria 5132
245 Ga0495645_0086581 3300046543 Bacteria 2242
246 Ga0495667_0030411 3300046559 Bacteria 3628
247 Ga0495634_0033383 3300046642 Bacteria 3537
248 Ga0495635_0024267 3300046663 Bacteria 4227
249 Ga0495657_0555591 3300046675 Bacteria 666
250 Ga0495623_0321548 3300046679 Bacteria 849
251 Ga0495613_0042379 3300046689 Bacteria 3368
252 Ga0495624_0104136 3300046690 Bacteria 1746
253 Ga0495670_0394180 3300046691 Unclassified 748
254 Ga0495600_0014644 3300046809 Bacteria 4944
255 Ga0495604_0026682 3300047317 Bacteria 4597
256 Ga0495674_0016351 3300047319 Bacteria 6919
257 Ga0495674_0033430 3300047319 Bacteria 4658
258 Ga0495674_0472343 3300047319 Unclassified 1006
259 Ga0495680_0051800 3300047322 Bacteria 3202
260 Ga0495680_0659641 3300047322 Bacteria 694
261 Ga0495684_0141191 3300047471 Bacteria 1806
262 Ga0495684_0302897 3300047471 Bacteria 1147
263 Ga0495593_0031863 3300047673 Bacteria 2877
264 Ga0495602_0290128 3300048088 Bacteria 1201
265 Ga0496101_0152116 3300048904 Bacteria 1771
266 Ga0496102_0150806 3300048905 Bacteria 2184
267 Ga0496103_0038581 3300048906 Bacteria 2932
268 Ga0496106_0051911 3300048909 Bacteria 3092
269 Ga0496110_0617414 3300048913 Unclassified 983
270 Ga0496112_1309082 3300048915 Bacteria 640
271 Ga0496114_0718355 3300048917 Bacteria 875
272 Ga0496115_0171178 3300048918 Bacteria 1796
273 Ga0496115_0380797 3300048918 Bacteria 1147
274 nmdc:mga08y16_969077_c1 3300050511 Unclassified 832
275 nmdc:mga0rr50_965858_c1 3300050513 Unclassified 726
276 nmdc:mga08x19_642688_c1 3300050514 Unclassified 752
277 nmdc:mga0a205_828239_c1 3300050515 Unclassified 773
278 nmdc:mga0a205_926572_c1 3300050515 Bacteria 718
279 Ga0495612_0139676 3300053078 Bacteria 1050
280 Ga0495619_0307589 3300053085 Bacteria 1098
281 Ga0500628_040662 3300053129 Bacteria 1060
282 Ga0500559_0193620 3300053136 Bacteria 958
283 Ga0500645_027014 3300053730 Bacteria 1743
284 Ga0070714_100088477
285 rootH2_10090046
286 Ga0070676_10061037
287 Ga0070676_10113285
288 Ga0070676_10525869
289 Ga0070683_100625227
290 Ga0070683_100979869
291 Ga0070666_10065094
292 Ga0070680_100341004
293 Ga0068868_100032743
294 Ga0070660_100017986
295 Ga0070668_100036545
296 Ga0070669_100167801
297 Ga0070675_101260819
298 Ga0070671_101714197
299 Ga0070674_100458601
300 Ga0070659_100002023
301 Ga0070667_100610487
302 Ga0070667_101218355
303 Ga0070709_10211295
304 Ga0070709_10833498
305 Ga0070714_100200634
306 Ga0070713_100991538
307 Ga0070710_10137613
308 Ga0070711_100787558
309 Ga0070708_100004452
310 Ga0070708_100098114
311 Ga0070708_100916503
312 Ga0070678_100165397
313 Ga0070662_100028766
314 Ga0070681_10154341
315 Ga0070706_100036663
316 Ga0070707_100056229
317 Ga0070707_100576427
318 Ga0070699_100849324
319 Ga0070679_101294794
320 Ga0070684_100772745
321 Ga0070696_100295673
322 Ga0070693_100661277
323 Ga0070665_100217816
324 Ga0070665_100298951
325 Ga0068855_100025833
326 Ga0070664_100184279
327 Ga0070664_100536123
328 Ga0068857_100477146
329 Ga0068856_100057826
330 Ga0068859_100231345
331 Ga0068859_100317024
332 Ga0068861_100007481
333 Ga0068858_100086542
334 Ga0068862_100099931
335 Ga0081455_10017720
336 Ga0081455_10195097
337 Ga0070717_10112564
338 Ga0070717_10190514
339 Ga0070715_10193903
340 Ga0070715_10549888
341 Ga0070712_100068151
342 Ga0070712_100411031
343 Ga0070712_100490615
344 Ga0070712_100679616
345 Ga0075433_11151333
346 Ga0068865_100332633
347 Ga0075436_100321400
348 Ga0097620_100231342
349 Ga0097620_100317005
350 Ga0075435_100724383
351 Ga0105240_10023391
352 Ga0111539_10476700
353 Ga0105245_10002549
354 Ga0105243_10564473
355 Ga0105241_10015884
356 Ga0105242_10842862
357 Ga0105242_12233215
358 Ga0105248_10045577
359 Ga0105248_10089988
360 Ga0105248_11808646
361 Ga0105237_10017326
362 Ga0105237_11425983
363 Ga0105238_10040542
364 Ga0105238_10101327
365 Ga0105249_10036264
366 Ga0099796_10415226
367 Ga0105239_10008125
368 Ga0157373_10115553
369 Ga0157373_10150937
370 Ga0157371_10272089
371 Ga0157371_10663044
372 Ga0157370_10179309
373 Ga0157370_10255826
374 Ga0157369_10059333
375 Ga0157369_10642124
376 Ga0157369_10784717
377 Ga0157374_10006418
378 Ga0157374_10270369
379 Ga0157374_10810352
380 Ga0157374_10947737
381 Ga0157378_10017509
382 Ga0157378_10225509
383 Ga0157378_10414408
384 Ga0163162_10005432
385 Ga0157372_10122291
386 Ga0157375_10066679
387 Ga0157375_10238718
388 Ga0157375_10259624
389 Ga0163163_11949028
390 Ga0157380_13305643
391 Ga0157376_11097213
392 Ga0157376_12038899
393 Ga0182006_1000160
394 Ga0213876_10000089
395 Ga0207697_10012149
396 Ga0207642_10103132
397 Ga0207688_10001602
398 Ga0207680_10907711
399 Ga0207685_10291485
400 Ga0207685_10322071
401 Ga0207685_10362162
402 Ga0207699_10155307
403 Ga0207645_10046715
404 Ga0207645_10309122
405 Ga0207654_10002328
406 Ga0207707_10351707
407 Ga0207695_10942891
408 Ga0207671_10020783
409 Ga0207693_10146487
410 Ga0207693_10503960
411 Ga0207693_10818549
412 Ga0207663_10128288
413 Ga0207660_10051407
414 Ga0207660_10197883
415 Ga0207657_10029263
416 Ga0207657_10277754
417 Ga0207652_10006029
418 Ga0207652_10287831
419 Ga0207646_10036110
420 Ga0207681_10038822
421 Ga0207694_10119250
422 Ga0207694_10167801
423 Ga0207659_10112731
424 Ga0207659_10133551
425 Ga0207659_10338729
426 Ga0207687_10011632
427 Ga0207687_10180161
428 Ga0207700_10290225
429 Ga0207664_10339787
430 Ga0207644_10080305
431 Ga0207644_10133369
432 Ga0207690_10001524
433 Ga0207706_10016653
434 Ga0207706_10332877
435 Ga0207709_10732530
436 Ga0207669_11470598
437 Ga0207704_10774217
438 Ga0207665_10069826
439 Ga0207665_10079674
440 Ga0207665_10438096
441 Ga0207691_10013530
442 Ga0207711_10064305
443 Ga0207711_10150435
444 Ga0207689_10580489
445 Ga0207661_10539840
446 Ga0207679_10071504
447 Ga0207667_10101582
448 Ga0207668_10116202
449 Ga0207658_11057866
450 Ga0207658_11291783
451 Ga0207677_10140934
452 Ga0207677_10266696
453 Ga0207677_10480959
454 Ga0207703_10890313
455 Ga0207703_11137814
456 Ga0207702_10038009
457 Ga0207702_10078820
458 Ga0207702_10250940
459 Ga0207648_10467746
460 Ga0207674_10714427
461 Ga0207675_100013096
462 Ga0207675_100577003
463 Ga0207683_10122498
464 Ga0268266_10291420
465 Ga0268266_10854248
466 Ga0268264_10256236
467 Ga0268264_10610191
468 Ga0265337_1001121
469 Ga0265326_10015197
470 Ga0265336_10000399
471 Ga0265338_10000096
472 Ga0265338_10010354
473 Ga0265320_10013856
474 Ga0265325_10030516
475 Ga0265325_10032960
476 Ga0265339_10444040
477 Ga0265331_10011702
478 Ga0265316_10005880
479 Ga0265314_10037132
480 Ga0265342_10059500
481 Ga0307414_10050978
482 Ga0373930_0053360
483 Ga0373959_0120469
484 Ga0373928_0000979
485 Ga0373944_0031737
486 Ga0373939_0273549
487 Ga0373954_0034372
488 Ga0373943_0131205
489 Ga0373955_0063455
490 Ga0373955_0102508
491 Ga0373955_0281395
492 Ga0373931_0020277
493 Ga0373935_0379688
494 Ga0373947_0123071
495 Ga0373947_0124695
496 Ga0373937_0329056
497 Ga0373937_1264127
498 Ga0373925_0196882
499 Ga0395898_1888034
500 Ga0436365_0083436
501 Ga0436365_1738066
502 Ga0436363_0910802
503 Ga0439460_0002613
504 Ga0451577_0088995
505 Ga0453683_0371130
506 Ga0453684_1106391
507 Ga0451576_0054175
508 Ga0451576_0322077
509 Ga0495592_0210249
510 Ga0495629_0213060
511 Ga0495651_0465621
512 Ga0495653_0005248
513 Ga0495580_0050693
514 Ga0495662_0469414
515 Ga0495608_0014161
516 Ga0495618_0016858
517 Ga0495630_0006409
518 Ga0495630_0550388
519 Ga0495652_0173821
520 Ga0495652_0579566
521 Ga0495665_0040825
522 Ga0495640_0188071
523 Ga0495640_0247005
524 Ga0495586_0005030
525 Ga0495587_0020909
526 Ga0495587_0269855
527 Ga0495645_0017511
528 Ga0495645_0086581
529 Ga0495667_0030411
530 Ga0495634_0033383
531 Ga0495635_0024267
532 Ga0495657_0555591
533 Ga0495623_0321548
534 Ga0495613_0042379
535 Ga0495624_0104136
536 Ga0495670_0394180
537 Ga0495600_0014644
538 Ga0495604_0026682
539 Ga0495674_0016351
540 Ga0495674_0033430
541 Ga0495674_0472343
542 Ga0495680_0051800
543 Ga0495680_0659641
544 Ga0495684_0141191
545 Ga0495684_0302897
546 Ga0495593_0031863
547 Ga0495602_0290128
548 Ga0496101_0152116
549 Ga0496102_0150806
550 Ga0496103_0038581
551 Ga0496106_0051911
552 Ga0496110_0617414
553 Ga0496112_1309082
554 Ga0496114_0718355
555 Ga0496115_0171178
556 Ga0496115_0380797
557 nmdc:mga08y16_969077_c1
558 nmdc:mga0rr50_965858_c1
559 nmdc:mga08x19_642688_c1
560 nmdc:mga0a205_828239_c1
561 nmdc:mga0a205_926572_c1
562 Ga0495612_0139676
563 Ga0495619_0307589
564 Ga0500628_040662
565 Ga0500559_0193620
566 Ga0500645_027014

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02502

LacAB_rpiB

Ribose/Galactose Isomerase

3

142

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3s5p-assembly1.cif.gz_B crystal structure of ribose-5-phosphate isomerase b rpib from giardia lamblia 0.9619 1 129
5ifz-assembly1.cif.gz_B crystal structure of ribose-5-phosphate isomerase from brucella melitensis 16m 0.9474 1 129
3s5p-assembly1.cif.gz_A crystal structure of ribose-5-phosphate isomerase b rpib from giardia lamblia 0.946 1 135
1o1x-assembly1.cif.gz_A crystal structure of a ribose 5-phosphate isomerase rpib (tm1080) from thermotoga maritima at 1.90 a resolution 0.9452 2 141
5ifz-assembly1.cif.gz_B crystal structure of ribose-5-phosphate isomerase from brucella melitensis 16m 0.9397 1 129
ID Description Score Start End Superfamily
3s5pB00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9619 1 129 3.40.1400.10
af_P9WKD7_1_162_3.40.1400.10 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9545 1 139 3.40.1400.10
5ifzB00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9474 1 129 3.40.1400.10
1o1xA00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9407 2 141 3.40.1400.10
5ifzB00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9397 1 129 3.40.1400.10
ID Description Score Start End GO Terms
AF-A0A5N8YEU9-F1-model_v4 RpiB/LacA/LacB family sugar-phosphate isomerase 0.9847 1 120 GO:0005975
GO:0016861
AF-A0A524GQ88-F1-model_v4 RpiB/LacA/LacB family sugar-phosphate isomerase 0.9821 2 126 GO:0004751
GO:0009052
GO:0019316
AF-A0A661ABM8-F1-model_v4 Ribose-5-phosphate isomerase 0.9802 1 129 GO:0005975
GO:0016861
AF-A0A1F7R991-F1-model_v4 Ribose-5-phosphate isomerase 0.9793 1 128 GO:0004751
GO:0009052
GO:0019316
AF-A0A7V1F9P5-F1-model_v4 Ribose 5-phosphate isomerase B (EC 5.3.1.6) 0.9757 1 131 GO:0004751
GO:0009052
GO:0019316

Map