F385110

General Info

Members Datasets Scaffolds Average Seq Length
282 187 564 414

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0037751|Ga0451577_0037751_275_1636
Length 453
Sequence MERVAALVAQYFPDSASVLHIGRLPVTALAGNYGTPLFVYDARVANQKWARLRNALPPRFAISYSVKANPNRAFLQHFLAKGCGLEIASAGEFHQALSAGCKPEQMLFAGPGKTEEELHLVLGHRIGEIHAESQLEIERIAAISRGLGLQAPVAVRVNPGGDAQGGAMRMGGKPAPFGIDEEMLDSVVAGLVADNAMDFRGVHLFVGTQILDHNILLGQYRKGIEIARRVAKLIRRPLHTVDFGGGLGIPYFPGDQELDMSALGAGLTVLLDEIKDDALFHGTQFLVEPGRYLVGEAGIYVARVNDIKVSRGKKFLILDGGMNHHLAASGNLGQTIKRNYPVALLNKLDSKPEEVVDVVGPLCTPLDVLARTVTLPKAQVGDLVGIFQSGAYARAASPLGFLSHPTPPEVWVQGGQEHLVRRRGEHEDYLRDLCPPISEGTPESRPGTSARSE

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
60 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
61 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
120 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
136 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
139 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
143 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
144 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
145 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
146 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
147 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
150 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
153 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
181 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
182 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
183 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
184 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
185 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
186 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
187 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.1
Metatranscriptomes 1.06
Isolates 2.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.06
Rhizosphere 96.81
Stem 0
Stem Tuber 0
Unclassified 3.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0037751 3300042876 Bacteria 4347
2 rootH1_10008340 3300003323 Bacteria 2662
3 Ga0058862_11389201 3300004803 Bacteria 6719
4 Ga0070676_10000862 3300005328 Bacteria 14943
5 Ga0070690_100000557 3300005330 Bacteria 18654
6 Ga0070670_100003196 3300005331 Bacteria 13514
7 Ga0070670_100034368 3300005331 Bacteria 4362
8 Ga0068869_100000345 3300005334 Bacteria 24861
9 Ga0070666_10027403 3300005335 Bacteria 3732
10 Ga0070682_100000553 3300005337 Bacteria 23217
11 Ga0070660_100000274 3300005339 Bacteria 34287
12 Ga0070689_100026757 3300005340 Bacteria 4344
13 Ga0070687_100010431 3300005343 Bacteria 4018
14 Ga0070661_100000681 3300005344 Bacteria 24928
15 Ga0070668_100002207 3300005347 Bacteria 14294
16 Ga0070669_100026641 3300005353 Bacteria 4160
17 Ga0070675_100022637 3300005354 Bacteria 5021
18 Ga0070675_100157633 3300005354 Bacteria 1950
19 Ga0070671_100026225 3300005355 Bacteria 4788
20 Ga0070671_100072960 3300005355 Bacteria 2867
21 Ga0070674_100013143 3300005356 Bacteria 5107
22 Ga0070673_100002411 3300005364 Bacteria 11376
23 Ga0070667_100003209 3300005367 Bacteria 14006
24 Ga0070703_10001283 3300005406 Bacteria 7611
25 Ga0070703_10006162 3300005406 Bacteria 3356
26 Ga0070709_10045142 3300005434 Bacteria 2733
27 Ga0070701_10111623 3300005438 Unclassified 1528
28 Ga0070705_100000589 3300005440 Bacteria 21142
29 Ga0070705_100000729 3300005440 Bacteria 18726
30 Ga0070705_100001579 3300005440 Bacteria 11934
31 Ga0070705_100003331 3300005440 Bacteria 7888
32 Ga0070700_100022948 3300005441 Bacteria 3647
33 Ga0070694_100000442 3300005444 Bacteria 22621
34 Ga0070694_100004405 3300005444 Bacteria 8467
35 Ga0070694_100181188 3300005444 Bacteria 1558
36 Ga0070708_100000476 3300005445 Bacteria 30340
37 Ga0070708_100046905 3300005445 Bacteria 3815
38 Ga0070663_100001746 3300005455 Bacteria 12085
39 Ga0070678_100000169 3300005456 Bacteria 28018
40 Ga0070681_10002757 3300005458 Bacteria 16209
41 Ga0068867_100000634 3300005459 Bacteria 23200
42 Ga0068867_100018072 3300005459 Bacteria 5011
43 Ga0070706_100000590 3300005467 Bacteria 42069
44 Ga0070706_100002737 3300005467 Bacteria 17623
45 Ga0070706_100016229 3300005467 Bacteria 6879
46 Ga0070707_100000114 3300005468 Bacteria 74542
47 Ga0070707_100072783 3300005468 Bacteria 3313
48 Ga0070698_100076533 3300005471 Bacteria 3348
49 Ga0070698_100088050 3300005471 Unclassified 3090
50 Ga0070698_100313934 3300005471 Unclassified 1498
51 Ga0070699_100000408 3300005518 Bacteria 41588
52 Ga0070699_100157331 3300005518 Unclassified 2011
53 Ga0070679_100002747 3300005530 Bacteria 16017
54 Ga0070697_100000061 3300005536 Bacteria 85209
55 Ga0070697_100000307 3300005536 Bacteria 38817
56 Ga0070697_100004069 3300005536 Bacteria 11212
57 Ga0068853_100001334 3300005539 Bacteria 17775
58 Ga0068853_100272702 3300005539 Bacteria 1558
59 Ga0070672_100008394 3300005543 Bacteria 7061
60 Ga0070695_100000055 3300005545 Bacteria 45989
61 Ga0070695_100000601 3300005545 Bacteria 19059
62 Ga0070696_100002584 3300005546 Bacteria 12001
63 Ga0070696_100007735 3300005546 Bacteria 7173
64 Ga0070693_100000026 3300005547 Bacteria 57942
65 Ga0070693_100001509 3300005547 Bacteria 10486
66 Ga0070665_100003175 3300005548 Bacteria 17687
67 Ga0070704_100000281 3300005549 Bacteria 22411
68 Ga0070704_100000540 3300005549 Bacteria 18097
69 Ga0068855_100000936 3300005563 Bacteria 36331
70 Ga0070664_100109433 3300005564 Bacteria 2410
71 Ga0068852_100012881 3300005616 Bacteria 6375
72 Ga0068859_100001137 3300005617 Bacteria 27106
73 Ga0068859_100159837 3300005617 Bacteria 2332
74 Ga0068864_100025220 3300005618 Bacteria 5005
75 Ga0068861_100014709 3300005719 Bacteria 5496
76 Ga0068851_10001492 3300005834 Bacteria 10276
77 Ga0068863_100249908 3300005841 Bacteria 1713
78 Ga0068858_100080604 3300005842 Bacteria 3025
79 Ga0068860_100012747 3300005843 Bacteria 8266
80 Ga0068860_100030089 3300005843 Bacteria 5222
81 Ga0068862_100003091 3300005844 Bacteria 14512
82 Ga0068862_100095291 3300005844 Bacteria 2596
83 Ga0081540_1052471 3300005983 Bacteria 2007
84 Ga0081539_10000001 3300005985 Bacteria 808331
85 Ga0081539_10005349 3300005985 Bacteria 13152
86 Ga0097621_100047101 3300006237 Bacteria 3492
87 Ga0075431_100242269 3300006847 Bacteria 1834
88 Ga0075433_10004027 3300006852 Bacteria 11367
89 Ga0075433_10011586 3300006852 Bacteria 7102
90 Ga0075433_10034346 3300006852 Bacteria 4355
91 Ga0075433_10058445 3300006852 Bacteria 3373
92 Ga0075434_100000938 3300006871 Bacteria 23449
93 Ga0075434_100034712 3300006871 Unclassified 4983
94 Ga0075434_100106960 3300006871 Bacteria 2807
95 Ga0068865_100226547 3300006881 Unclassified 1464
96 Ga0075436_100000833 3300006914 Bacteria 20544
97 Ga0075436_100001921 3300006914 Bacteria 14272
98 Ga0075436_100058269 3300006914 Bacteria 2667
99 Ga0097620_100001137 3300006931 Bacteria 27106
100 Ga0097620_100159834 3300006931 Bacteria 2332
101 Ga0075435_100004042 3300007076 Bacteria 10030
102 Ga0075435_100047310 3300007076 Bacteria 3453
103 Ga0075435_100053062 3300007076 Bacteria 3268
104 Ga0075435_100149011 3300007076 Bacteria 1966
105 Ga0099794_10000164 3300007265 Bacteria 24399
106 Ga0099794_10000660 3300007265 Bacteria 11535
107 Ga0099794_10005137 3300007265 Bacteria 5223
108 Ga0099795_10002206 3300007788 Bacteria 4508
109 Ga0114129_10013110 3300009147 Bacteria 11805
110 Ga0114129_10023460 3300009147 Bacteria 8746
111 Ga0114129_10379479 3300009147 Bacteria 1867
112 Ga0105241_10000133 3300009174 Bacteria 53690
113 Ga0105248_10032102 3300009177 Bacteria 5868
114 Ga0105248_10476610 3300009177 Bacteria 1407
115 Ga0105249_10294073 3300009553 Unclassified 1626
116 Ga0157373_10000729 3300013100 Bacteria 25688
117 Ga0157369_10036752 3300013105 Bacteria 5365
118 Ga0163162_10207291 3300013306 Bacteria 2089
119 Ga0163162_10230974 3300013306 Bacteria 1980
120 Ga0157372_10001726 3300013307 Bacteria 23707
121 Ga0157372_10088142 3300013307 Bacteria 3523
122 Ga0157375_10232654 3300013308 Bacteria 2002
123 Ga0163163_10001330 3300014325 Bacteria 20850
124 Ga0163163_10033321 3300014325 Bacteria 4983
125 Ga0157379_10055448 3300014968 Unclassified 3541
126 Ga0224572_1001954 3300024225 Unclassified 3212
127 Ga0207653_10002419 3300025885 Bacteria 5939
128 Ga0207653_10003569 3300025885 Bacteria 4900
129 Ga0207682_10004862 3300025893 Bacteria 5548
130 Ga0207645_10000617 3300025907 Bacteria 29514
131 Ga0207645_10001473 3300025907 Bacteria 19240
132 Ga0207643_10000253 3300025908 Bacteria 37382
133 Ga0207643_10055170 3300025908 Bacteria 2259
134 Ga0207684_10003910 3300025910 Bacteria 14278
135 Ga0207684_10014190 3300025910 Bacteria 6877
136 Ga0207684_10068157 3300025910 Bacteria 3024
137 Ga0207654_10007720 3300025911 Bacteria 5428
138 Ga0207707_10000345 3300025912 Bacteria 49138
139 Ga0207660_10001576 3300025917 Bacteria 15293
140 Ga0207657_10000396 3300025919 Bacteria 46037
141 Ga0207649_10013991 3300025920 Bacteria 4490
142 Ga0207652_10002080 3300025921 Bacteria 17224
143 Ga0207646_10000086 3300025922 Bacteria 125294
144 Ga0207646_10119695 3300025922 Bacteria 2365
145 Ga0207650_10057408 3300025925 Bacteria 2895
146 Ga0207659_10027051 3300025926 Bacteria 3878
147 Ga0207644_10114022 3300025931 Bacteria 2047
148 Ga0207706_10019532 3300025933 Bacteria 6096
149 Ga0207669_10112745 3300025937 Bacteria 1826
150 Ga0207665_10029424 3300025939 Bacteria 3630
151 Ga0207691_10000282 3300025940 Bacteria 50196
152 Ga0207691_10047352 3300025940 Bacteria 3945
153 Ga0207711_10044220 3300025941 Bacteria 3801
154 Ga0207689_10000582 3300025942 Bacteria 34938
155 Ga0207667_10059307 3300025949 Bacteria 4008
156 Ga0207651_10018268 3300025960 Bacteria 4168
157 Ga0207651_10021413 3300025960 Bacteria 3929
158 Ga0207668_10006087 3300025972 Bacteria 7113
159 Ga0207640_10019450 3300025981 Bacteria 4012
160 Ga0207658_10071078 3300025986 Bacteria 2634
161 Ga0207677_10248447 3300026023 Bacteria 1443
162 Ga0207639_10080579 3300026041 Bacteria 2576
163 Ga0207702_10003717 3300026078 Bacteria 13792
164 Ga0207641_10209435 3300026088 Bacteria 1802
165 Ga0207648_10031884 3300026089 Bacteria 4656
166 Ga0207676_10080815 3300026095 Bacteria 2639
167 Ga0207674_10000266 3300026116 Bacteria 65623
168 Ga0207675_100096091 3300026118 Bacteria 2789
169 Ga0207683_10000005 3300026121 Bacteria 187889
170 Ga0207698_10156775 3300026142 Bacteria 1985
171 Ga0209588_1001222 3300027671 Bacteria 6645
172 Ga0209588_1010724 3300027671 Bacteria 2760
173 Ga0268266_10013006 3300028379 Bacteria 7175
174 Ga0268264_10012359 3300028381 Bacteria 7028
175 Ga0268264_10032697 3300028381 Bacteria 4269
176 Ga0265770_1000110 3300030878 Bacteria 9743
177 Ga0265760_10000074 3300031090 Bacteria 25330
178 Ga0265328_10037812 3300031239 Bacteria 1782
179 Ga0265327_10001253 3300031251 Bacteria 33702
180 Ga0265327_10002604 3300031251 Bacteria 18671
181 Ga0265316_10002528 3300031344 Bacteria 18909
182 Ga0307416_100035368 3300032002 Bacteria 3814
183 Ga0395900_0000094 3300037418 Bacteria 165903
184 Ga0395901_0000162 3300038443 Bacteria 87139
185 Ga0439448_0003226 3300042005 Bacteria 4504
186 Ga0451577_0013063 3300042876 Bacteria 7791
187 Ga0451577_0020153 3300042876 Bacteria 6123
188 Ga0453683_0003779 3300044673 Bacteria 11037
189 Ga0453683_0027996 3300044673 Bacteria 3571
190 Ga0453684_0002360 3300044712 Bacteria 46149
191 Ga0453684_0138542 3300044712 Bacteria 2910
192 Ga0466957_0007262 3300044842 Bacteria 6263
193 Ga0466959_0006572 3300045049 Bacteria 8070
194 Ga0451576_0010787 3300045051 Bacteria 10459
195 Ga0451576_0032534 3300045051 Bacteria 5552
196 Ga0495617_000186 3300046452 Bacteria 39452
197 Ga0495580_0000152 3300046472 Bacteria 50358
198 Ga0495605_0000077 3300046474 Bacteria 127523
199 Ga0495584_0000131 3300046491 Bacteria 51733
200 Ga0495584_0014846 3300046491 Bacteria 3970
201 Ga0495585_0000043 3300046492 Bacteria 125158
202 Ga0495585_0000267 3300046492 Bacteria 52137
203 Ga0495596_0000642 3300046500 Bacteria 21936
204 Ga0495596_0001088 3300046500 Bacteria 16087
205 Ga0495607_0001452 3300046501 Bacteria 21100
206 Ga0495607_0006593 3300046501 Bacteria 8147
207 Ga0495583_0000950 3300046506 Bacteria 33720
208 Ga0495583_0003357 3300046506 Bacteria 12331
209 Ga0495606_0011871 3300046507 Bacteria 7049
210 Ga0495606_0103473 3300046507 Bacteria 1729
211 Ga0495606_0109051 3300046507 Bacteria 1672
212 Ga0495616_0000556 3300046513 Bacteria 28222
213 Ga0495616_0004936 3300046513 Bacteria 8328
214 Ga0495616_0015998 3300046513 Bacteria 4159
215 Ga0495620_0001849 3300046515 Bacteria 12464
216 Ga0495631_0025272 3300046518 Bacteria 2737
217 Ga0495632_0001441 3300046519 Bacteria 19811
218 Ga0495632_0001796 3300046519 Bacteria 17318
219 Ga0495643_0002638 3300046522 Bacteria 13917
220 Ga0495643_0008162 3300046522 Bacteria 6660
221 Ga0495644_0037736 3300046523 Bacteria 1823
222 Ga0495648_0000073 3300046524 Bacteria 130626
223 Ga0495648_0002611 3300046524 Bacteria 16463
224 Ga0495648_0056091 3300046524 Bacteria 2372
225 Ga0495642_0027560 3300046528 Bacteria 2261
226 Ga0495656_0045626 3300046615 Bacteria 1851
227 Ga0495668_0135948 3300046616 Bacteria 1345
228 Ga0495611_0008197 3300046648 Bacteria 4433
229 Ga0495661_0001029 3300046665 Bacteria 24773
230 Ga0495661_0004131 3300046665 Bacteria 10570
231 Ga0495661_0018457 3300046665 Bacteria 4586
232 Ga0495649_0009371 3300046694 Bacteria 5825
233 Ga0495589_0000177 3300046794 Bacteria 56442
234 Ga0495660_0001461 3300046810 Bacteria 16146
235 Ga0495604_0097571 3300047317 Bacteria 2167
236 Ga0495672_0000089 3300047320 Bacteria 150897
237 Ga0495672_0025565 3300047320 Bacteria 3776
238 Ga0495687_000246 3300047443 Bacteria 73921
239 Ga0495687_001170 3300047443 Bacteria 25299
240 Ga0495687_021484 3300047443 Bacteria 3120
241 Ga0495687_028751 3300047443 Bacteria 2581
242 Ga0495677_0000198 3300047445 Bacteria 27839
243 Ga0495677_0000493 3300047445 Bacteria 16754
244 Ga0495681_0023039 3300047470 Bacteria 3317
245 Ga0495686_0044475 3300047472 Bacteria 2811
246 Ga0495626_0000260 3300048091 Bacteria 60180
247 Ga0495626_0001061 3300048091 Bacteria 23518
248 Ga0495626_0001090 3300048091 Bacteria 23046
249 Ga0495626_0003436 3300048091 Bacteria 10152
250 Ga0496106_0258241 3300048909 Bacteria 1394
251 Ga0496108_0229870 3300048911 Bacteria 1613
252 Ga0496110_0000222 3300048913 Bacteria 36738
253 Ga0496125_0157642 3300048928 Bacteria 1548
254 Ga0495682_0047276 3300049460 Bacteria 1570
255 Ga0501034_0123190 3300049571 Unclassified 2578
256 Ga0501043_0040299 3300049579 Bacteria 3671
257 Ga0501043_0142045 3300049579 Bacteria 1880
258 Ga0501046_0018275 3300049580 Bacteria 5836
259 Ga0501046_0034953 3300049580 Bacteria 4052
260 Ga0501047_0006004 3300049581 Bacteria 11415
261 Ga0501070_0002703 3300049586 Bacteria 15483
262 Ga0501035_0000456 3300049822 Bacteria 45788
263 Ga0501044_0035589 3300049823 Bacteria 5213
264 Ga0501044_0249756 3300049823 Bacteria 1715
265 nmdc:mga05p37_332846_c1 3300050507 Bacteria 1793
266 nmdc:mga05p37_7983_c1 3300050507 Bacteria 12493
267 nmdc:mga05p37_9381_c1 3300050507 Bacteria 11583
268 nmdc:mga0n895_12516_c1 3300050512 Bacteria 7615
269 nmdc:mga0n895_33646_c1 3300050512 Bacteria 4928
270 nmdc:mga08x19_202_c1 3300050514 Bacteria 14298
271 nmdc:mga08x19_50384_c1 3300050514 Bacteria 2672
272 nmdc:mga0a205_46973_c1 3300050515 Bacteria 4164
273 nmdc:mga0a205_9350_c1 3300050515 Bacteria 8956
274 nmdc:mga0a205_98143_c1 3300050515 Bacteria 2828
275 2691331959 2690315857 Bacteria 4396207
276 2809146118 2808606418 Bacteria 6724496
277 2829747722 2829745981 Bacteria 5406054
278 2842700682 2842698319 Bacteria 5190321
279 2861695062 2861691609 Bacteria 5628931
280 2870721571 2870721527 Bacteria 9689237
281 2919536629 2919534386 Bacteria 4577686
282 8003861235 8003856774 Bacteria 7675274
283 Ga0451577_0037751
284 rootH1_10008340
285 Ga0058862_11389201
286 Ga0070676_10000862
287 Ga0070690_100000557
288 Ga0070670_100003196
289 Ga0070670_100034368
290 Ga0068869_100000345
291 Ga0070666_10027403
292 Ga0070682_100000553
293 Ga0070660_100000274
294 Ga0070689_100026757
295 Ga0070687_100010431
296 Ga0070661_100000681
297 Ga0070668_100002207
298 Ga0070669_100026641
299 Ga0070675_100022637
300 Ga0070675_100157633
301 Ga0070671_100026225
302 Ga0070671_100072960
303 Ga0070674_100013143
304 Ga0070673_100002411
305 Ga0070667_100003209
306 Ga0070703_10001283
307 Ga0070703_10006162
308 Ga0070709_10045142
309 Ga0070701_10111623
310 Ga0070705_100000589
311 Ga0070705_100000729
312 Ga0070705_100001579
313 Ga0070705_100003331
314 Ga0070700_100022948
315 Ga0070694_100000442
316 Ga0070694_100004405
317 Ga0070694_100181188
318 Ga0070708_100000476
319 Ga0070708_100046905
320 Ga0070663_100001746
321 Ga0070678_100000169
322 Ga0070681_10002757
323 Ga0068867_100000634
324 Ga0068867_100018072
325 Ga0070706_100000590
326 Ga0070706_100002737
327 Ga0070706_100016229
328 Ga0070707_100000114
329 Ga0070707_100072783
330 Ga0070698_100076533
331 Ga0070698_100088050
332 Ga0070698_100313934
333 Ga0070699_100000408
334 Ga0070699_100157331
335 Ga0070679_100002747
336 Ga0070697_100000061
337 Ga0070697_100000307
338 Ga0070697_100004069
339 Ga0068853_100001334
340 Ga0068853_100272702
341 Ga0070672_100008394
342 Ga0070695_100000055
343 Ga0070695_100000601
344 Ga0070696_100002584
345 Ga0070696_100007735
346 Ga0070693_100000026
347 Ga0070693_100001509
348 Ga0070665_100003175
349 Ga0070704_100000281
350 Ga0070704_100000540
351 Ga0068855_100000936
352 Ga0070664_100109433
353 Ga0068852_100012881
354 Ga0068859_100001137
355 Ga0068859_100159837
356 Ga0068864_100025220
357 Ga0068861_100014709
358 Ga0068851_10001492
359 Ga0068863_100249908
360 Ga0068858_100080604
361 Ga0068860_100012747
362 Ga0068860_100030089
363 Ga0068862_100003091
364 Ga0068862_100095291
365 Ga0081540_1052471
366 Ga0081539_10000001
367 Ga0081539_10005349
368 Ga0097621_100047101
369 Ga0075431_100242269
370 Ga0075433_10004027
371 Ga0075433_10011586
372 Ga0075433_10034346
373 Ga0075433_10058445
374 Ga0075434_100000938
375 Ga0075434_100034712
376 Ga0075434_100106960
377 Ga0068865_100226547
378 Ga0075436_100000833
379 Ga0075436_100001921
380 Ga0075436_100058269
381 Ga0097620_100001137
382 Ga0097620_100159834
383 Ga0075435_100004042
384 Ga0075435_100047310
385 Ga0075435_100053062
386 Ga0075435_100149011
387 Ga0099794_10000164
388 Ga0099794_10000660
389 Ga0099794_10005137
390 Ga0099795_10002206
391 Ga0114129_10013110
392 Ga0114129_10023460
393 Ga0114129_10379479
394 Ga0105241_10000133
395 Ga0105248_10032102
396 Ga0105248_10476610
397 Ga0105249_10294073
398 Ga0157373_10000729
399 Ga0157369_10036752
400 Ga0163162_10207291
401 Ga0163162_10230974
402 Ga0157372_10001726
403 Ga0157372_10088142
404 Ga0157375_10232654
405 Ga0163163_10001330
406 Ga0163163_10033321
407 Ga0157379_10055448
408 Ga0224572_1001954
409 Ga0207653_10002419
410 Ga0207653_10003569
411 Ga0207682_10004862
412 Ga0207645_10000617
413 Ga0207645_10001473
414 Ga0207643_10000253
415 Ga0207643_10055170
416 Ga0207684_10003910
417 Ga0207684_10014190
418 Ga0207684_10068157
419 Ga0207654_10007720
420 Ga0207707_10000345
421 Ga0207660_10001576
422 Ga0207657_10000396
423 Ga0207649_10013991
424 Ga0207652_10002080
425 Ga0207646_10000086
426 Ga0207646_10119695
427 Ga0207650_10057408
428 Ga0207659_10027051
429 Ga0207644_10114022
430 Ga0207706_10019532
431 Ga0207669_10112745
432 Ga0207665_10029424
433 Ga0207691_10000282
434 Ga0207691_10047352
435 Ga0207711_10044220
436 Ga0207689_10000582
437 Ga0207667_10059307
438 Ga0207651_10018268
439 Ga0207651_10021413
440 Ga0207668_10006087
441 Ga0207640_10019450
442 Ga0207658_10071078
443 Ga0207677_10248447
444 Ga0207639_10080579
445 Ga0207702_10003717
446 Ga0207641_10209435
447 Ga0207648_10031884
448 Ga0207676_10080815
449 Ga0207674_10000266
450 Ga0207675_100096091
451 Ga0207683_10000005
452 Ga0207698_10156775
453 Ga0209588_1001222
454 Ga0209588_1010724
455 Ga0268266_10013006
456 Ga0268264_10012359
457 Ga0268264_10032697
458 Ga0265770_1000110
459 Ga0265760_10000074
460 Ga0265328_10037812
461 Ga0265327_10001253
462 Ga0265327_10002604
463 Ga0265316_10002528
464 Ga0307416_100035368
465 Ga0395900_0000094
466 Ga0395901_0000162
467 Ga0439448_0003226
468 Ga0451577_0013063
469 Ga0451577_0020153
470 Ga0453683_0003779
471 Ga0453683_0027996
472 Ga0453684_0002360
473 Ga0453684_0138542
474 Ga0466957_0007262
475 Ga0466959_0006572
476 Ga0451576_0010787
477 Ga0451576_0032534
478 Ga0495617_000186
479 Ga0495580_0000152
480 Ga0495605_0000077
481 Ga0495584_0000131
482 Ga0495584_0014846
483 Ga0495585_0000043
484 Ga0495585_0000267
485 Ga0495596_0000642
486 Ga0495596_0001088
487 Ga0495607_0001452
488 Ga0495607_0006593
489 Ga0495583_0000950
490 Ga0495583_0003357
491 Ga0495606_0011871
492 Ga0495606_0103473
493 Ga0495606_0109051
494 Ga0495616_0000556
495 Ga0495616_0004936
496 Ga0495616_0015998
497 Ga0495620_0001849
498 Ga0495631_0025272
499 Ga0495632_0001441
500 Ga0495632_0001796
501 Ga0495643_0002638
502 Ga0495643_0008162
503 Ga0495644_0037736
504 Ga0495648_0000073
505 Ga0495648_0002611
506 Ga0495648_0056091
507 Ga0495642_0027560
508 Ga0495656_0045626
509 Ga0495668_0135948
510 Ga0495611_0008197
511 Ga0495661_0001029
512 Ga0495661_0004131
513 Ga0495661_0018457
514 Ga0495649_0009371
515 Ga0495589_0000177
516 Ga0495660_0001461
517 Ga0495604_0097571
518 Ga0495672_0000089
519 Ga0495672_0025565
520 Ga0495687_000246
521 Ga0495687_001170
522 Ga0495687_021484
523 Ga0495687_028751
524 Ga0495677_0000198
525 Ga0495677_0000493
526 Ga0495681_0023039
527 Ga0495686_0044475
528 Ga0495626_0000260
529 Ga0495626_0001061
530 Ga0495626_0001090
531 Ga0495626_0003436
532 Ga0496106_0258241
533 Ga0496108_0229870
534 Ga0496110_0000222
535 Ga0496125_0157642
536 Ga0495682_0047276
537 Ga0501034_0123190
538 Ga0501043_0040299
539 Ga0501043_0142045
540 Ga0501046_0018275
541 Ga0501046_0034953
542 Ga0501047_0006004
543 Ga0501070_0002703
544 Ga0501035_0000456
545 Ga0501044_0035589
546 Ga0501044_0249756
547 nmdc:mga05p37_332846_c1
548 nmdc:mga05p37_7983_c1
549 nmdc:mga05p37_9381_c1
550 nmdc:mga0n895_12516_c1
551 nmdc:mga0n895_33646_c1
552 nmdc:mga08x19_202_c1
553 nmdc:mga08x19_50384_c1
554 nmdc:mga0a205_46973_c1
555 nmdc:mga0a205_9350_c1
556 nmdc:mga0a205_98143_c1
557 2691331959
558 2809146118
559 2829747722
560 2842700682
561 2861695062
562 2870721571
563 2919536629
564 8003861235

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

43

295

0.95

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

37

390

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2plj-assembly1.cif.gz_B crystal structure of lysine/ornithine decarboxylase complexed with putrescine from vibrio vulnificus 0.8615 3 372
1njj-assembly2.cif.gz_C crystal structure determination of t. brucei ornithine decarboxylase bound to d-ornithine and to g418 0.8579 6 367
2plk-assembly1.cif.gz_A crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from vibrio vulnificus 0.8544 3 372
1njj-assembly1.cif.gz_A crystal structure determination of t. brucei ornithine decarboxylase bound to d-ornithine and to g418 0.8531 6 367
2p3e-assembly1.cif.gz_B crystal structure of aq1208 from aquifex aeolicus 0.8523 7 397
ID Description Score Start End Superfamily
af_Q2G1M6_27_256_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8935 24 252 3.20.20.10
af_Q2G1M6_27_256_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8826 24 252 3.20.20.10
2p3eA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8795 23 267 3.20.20.10
2p3eA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.865 23 267 3.20.20.10
2j66A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8615 23 272 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A257LSM9-F1-model_v4 Orn/DAP/Arg decarboxylase 2 N-terminal domain-containing protein 0.9478 41 133 GO:0008836
GO:0009089
AF-A0A672YK98-F1-model_v4 ornithine decarboxylase (EC 4.1.1.17) 0.9401 15 123 GO:0004586
GO:0005737
GO:0033387
AF-A0A3D4YTZ3-F1-model_v4 Diaminopimelate decarboxylase 0.9384 7 117 GO:0008836
GO:0009089
AF-A0A6I5C9E2-F1-model_v4 Type III PLP-dependent enzyme 0.936 7 133 GO:0008836
GO:0009089
AF-A0A529T0Q3-F1-model_v4 Diaminopimelate decarboxylase 0.9356 7 131 GO:0006596
GO:0008836
GO:0009089

Map