F384852

General Info

Members Datasets Scaffolds Average Seq Length
282 180 252 281

Family's Representative Sequence

Representative Sequence 3300006186|Ga0075369_10010239|Ga0075369_100102392
Length 295
Sequence MTTLLDIRDLDVSYPVKGFRKPPFQALRGVSLDIRPGETVGLVGESGSGKTTLGRAVLGLAPVTGGSIRFEDREIAHLSRSARRELSSEIQVVFQDPYSSLNPAMTIEQILSEPLRAKGVARQAANTRVRDLLGRVNLPADAADRLPREFSGGQRQRIAIARALALDPSLIVCDEPVSALDLSTQARVLDLFIEIQERTGVAYLFISHDLAVVRHISHRVAVMYHGEIVETGDGDQVTSAPEHPYTQRLFMAAPVPDPVRQEQRRADRHRLLAAQDEADVQADASTVSTVSTERP

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221591 Devosia sp. Root685 Isolate Unclassified
3 2671180195 Frankia sp. CcI49 Isolate Nodule
4 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
5 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
6 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
7 2773857922 Frankia sp. CcI49 Isolate Nodule
8 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
9 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
10 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
11 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
12 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
13 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
14 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
15 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
16 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
17 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
18 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
19 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
20 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
21 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
22 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
23 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
24 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
25 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
26 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
28 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
71 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
111 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
164 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
165 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
166 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
167 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
168 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
169 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
170 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
171 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
172 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
175 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
178 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
179 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
180 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.01
Metatranscriptomes 0.35
Isolates 10.64

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 28.01
Nodule 1.06
Rhizoplane 6.38
Rhizosphere 42.55
Stem 0
Stem Tuber 0
Unclassified 21.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1004882 3300002737 Bacteria 2878
2 JGI25406J46586_10017465 3300003203 Bacteria 2965
3 JGI25165J46597_1002273 3300003214 Bacteria 6594
4 Ga0055540_1004603 3300003792 Bacteria 6128
5 Ga0070682_100341089 3300005337 Bacteria 1114
6 Ga0070667_100044221 3300005367 Bacteria 3739
7 Ga0070667_100053254 3300005367 Bacteria 3415
8 Ga0068864_100281224 3300005618 Bacteria 1553
9 Ga0068858_100005940 3300005842 Bacteria 11923
10 Ga0068860_100417226 3300005843 Bacteria 1330
11 Ga0081455_10000482 3300005937 Bacteria 51729
12 Ga0081540_1000579 3300005983 Bacteria 35373
13 Ga0081539_10001409 3300005985 Bacteria 41379
14 Ga0075365_10000925 3300006038 Bacteria 12388
15 Ga0075365_10005364 3300006038 Bacteria 6909
16 Ga0075365_10007052 3300006038 Bacteria 6258
17 Ga0075365_10009526 3300006038 Bacteria 5592
18 Ga0075365_10072459 3300006038 Bacteria 2320
19 Ga0075365_10152388 3300006038 Bacteria 1608
20 Ga0075368_10010855 3300006042 Bacteria 3303
21 Ga0075364_10016752 3300006051 Bacteria 4565
22 Ga0075364_10018479 3300006051 Bacteria 4364
23 Ga0075364_10055365 3300006051 Bacteria 2595
24 Ga0075364_10081427 3300006051 Bacteria 2141
25 Ga0075364_10108909 3300006051 Bacteria 1848
26 Ga0075364_10200620 3300006051 Bacteria 1352
27 Ga0075432_10001412 3300006058 Bacteria 7807
28 Ga0075362_10017325 3300006177 Bacteria 2967
29 Ga0075367_10001575 3300006178 Bacteria 9879
30 Ga0075367_10022143 3300006178 Bacteria 3560
31 Ga0075369_10010239 3300006186 Bacteria 3664
32 Ga0075369_10013570 3300006186 Bacteria 3238
33 Ga0075369_10014666 3300006186 Bacteria 3135
34 Ga0075369_10075923 3300006186 Bacteria 1485
35 Ga0075369_10095907 3300006186 Bacteria 1327
36 Ga0075370_10025277 3300006353 Bacteria 3283
37 Ga0075370_10051263 3300006353 Bacteria 2341
38 Ga0075430_100068261 3300006846 Bacteria 2983
39 Ga0105244_10081508 3300009036 Bacteria 1601
40 Ga0105245_10113972 3300009098 Bacteria 2518
41 Ga0105237_10267255 3300009545 Bacteria 1713
42 Ga0105238_10114607 3300009551 Bacteria 2675
43 Ga0157370_10340266 3300013104 Bacteria 1383
44 Ga0157369_10188589 3300013105 Bacteria 2167
45 Ga0157372_10443142 3300013307 Bacteria 1514
46 Ga0157375_10656600 3300013308 Bacteria 1205
47 Ga0206353_10268478 3300020082 Bacteria 2749
48 Ga0209437_100064 3300025233 Bacteria 334360
49 Ga0209233_1000081 3300025261 Bacteria 336832
50 Ga0209676_1006046 3300025292 Bacteria 6098
51 Ga0209758_1000115 3300025297 Bacteria 199268
52 Ga0207426_1019013 3300025302 Bacteria 2410
53 Ga0209051_1002043 3300025303 Bacteria 15334
54 Ga0209257_1003191 3300025304 Bacteria 14558
55 Ga0207655_1069268 3300025728 Bacteria 1319
56 Ga0207687_10383992 3300025927 Bacteria 1151
57 Ga0207658_10019854 3300025986 Bacteria 4650
58 Ga0207658_10046889 3300025986 Bacteria 3159
59 Ga0209813_10012785 3300027866 Bacteria 2227
60 Ga0207428_10091895 3300027907 Bacteria 2356
61 Ga0268264_10047816 3300028381 Bacteria 3557
62 Ga0307517_10011228 3300028786 Bacteria 12428
63 Ga0307517_10220362 3300028786 Bacteria 1154
64 Ga0307515_10000025 3300028794 Bacteria 390205
65 Ga0307515_10000038 3300028794 Bacteria 331376
66 Ga0307515_10003903 3300028794 Bacteria 31108
67 Ga0307515_10012244 3300028794 Bacteria 16154
68 Ga0307511_10000888 3300030521 Bacteria 31531
69 Ga0307511_10066546 3300030521 Bacteria 2684
70 Ga0307512_10001544 3300030522 Bacteria 32298
71 Ga0307512_10011778 3300030522 Bacteria 8269
72 Ga0307513_10007047 3300031456 Bacteria 14621
73 Ga0307509_10013267 3300031507 Bacteria 9768
74 Ga0307509_10023776 3300031507 Bacteria 6869
75 Ga0307509_10037563 3300031507 Bacteria 5293
76 Ga0307408_100034766 3300031548 Bacteria 3532
77 Ga0307408_100054509 3300031548 Bacteria 2891
78 Ga0307408_100101768 3300031548 Bacteria 2190
79 Ga0307408_100115050 3300031548 Bacteria 2074
80 Ga0307408_100288696 3300031548 Bacteria 1369
81 Ga0307508_10023006 3300031616 Bacteria 5662
82 Ga0307508_10033939 3300031616 Bacteria 4602
83 Ga0307508_10044292 3300031616 Bacteria 3982
84 Ga0307516_10022656 3300031730 Bacteria 6448
85 Ga0307516_10026461 3300031730 Bacteria 5889
86 Ga0307516_10067876 3300031730 Bacteria 3435
87 Ga0307516_10130657 3300031730 Bacteria 2291
88 Ga0307405_10078357 3300031731 Bacteria 2150
89 Ga0307405_10145772 3300031731 Bacteria 1658
90 Ga0307518_10022460 3300031838 Bacteria 4540
91 Ga0307518_10071056 3300031838 Bacteria 2521
92 Ga0307410_10047324 3300031852 Bacteria 2874
93 Ga0307410_10218183 3300031852 Bacteria 1466
94 Ga0307406_10001868 3300031901 Bacteria 11501
95 Ga0307407_10056895 3300031903 Bacteria 2267
96 Ga0307412_10154395 3300031911 Bacteria 1698
97 Ga0307412_10189596 3300031911 Bacteria 1553
98 Ga0307412_10229447 3300031911 Bacteria 1429
99 Ga0307416_100006773 3300032002 Bacteria 7204
100 Ga0307411_10107027 3300032005 Bacteria 1992
101 Ga0307415_100163751 3300032126 Bacteria 1727
102 Ga0307507_10008897 3300033179 Bacteria 13652
103 Ga0307507_10014047 3300033179 Bacteria 9614
104 Ga0307510_10067003 3300033180 Bacteria 3620
105 Ga0395899_0001038 3300037312 Bacteria 25222
106 Ga0395899_0044612 3300037312 Bacteria 3303
107 Ga0395898_0001449 3300037466 Bacteria 33602
108 Ga0395901_0013123 3300038443 Bacteria 8409
109 Ga0436363_0470794 3300039450 Bacteria 1492
110 Ga0466972_0033068 3300044658 Bacteria 2537
111 Ga0466972_0074596 3300044658 Bacteria 1616
112 Ga0466965_0031825 3300044683 Bacteria 2574
113 Ga0466970_0014694 3300044765 Bacteria 4021
114 Ga0466960_0175013 3300044901 Bacteria 1160
115 Ga0466959_0097119 3300045049 Bacteria 2111
116 Ga0495629_0018576 3300046459 Bacteria 4972
117 Ga0495638_0025155 3300046460 Bacteria 3874
118 Ga0495638_0075231 3300046460 Bacteria 2058
119 Ga0495638_0085461 3300046460 Bacteria 1908
120 Ga0495638_0193782 3300046460 Bacteria 1152
121 Ga0495651_0001067 3300046462 Bacteria 21168
122 Ga0495651_0385755 3300046462 Bacteria 918
123 Ga0495650_0035444 3300046471 Bacteria 2197
124 Ga0495582_0022131 3300046473 Bacteria 3478
125 Ga0495662_0009181 3300046476 Bacteria 4853
126 Ga0495664_0034225 3300046477 Bacteria 2988
127 Ga0495608_0012081 3300046511 Bacteria 6003
128 Ga0495618_0117866 3300046514 Bacteria 1700
129 Ga0495643_0105618 3300046522 Bacteria 1438
130 Ga0495652_0223798 3300046529 Bacteria 1412
131 Ga0495586_0071565 3300046535 Bacteria 1895
132 Ga0495587_0064951 3300046536 Bacteria 2132
133 Ga0495656_0122041 3300046615 Bacteria 1231
134 Ga0495656_0202263 3300046615 Bacteria 986
135 Ga0495668_0093542 3300046616 Bacteria 1646
136 Ga0495634_0000948 3300046642 Bacteria 27438
137 Ga0495625_0006398 3300046660 Bacteria 10501
138 Ga0495635_0000988 3300046663 Bacteria 18731
139 Ga0495635_0037595 3300046663 Bacteria 3351
140 Ga0495588_0005410 3300046674 Bacteria 5681
141 Ga0495588_0017526 3300046674 Bacteria 3480
142 Ga0495657_0005109 3300046675 Bacteria 10418
143 Ga0495657_0098539 3300046675 Bacteria 1865
144 Ga0495646_0007067 3300046680 Bacteria 7130
145 Ga0495646_0097534 3300046680 Bacteria 1689
146 Ga0495658_0051594 3300046683 Bacteria 2330
147 Ga0495613_0000794 3300046689 Bacteria 24570
148 Ga0495600_0012865 3300046809 Bacteria 5242
149 Ga0495600_0053014 3300046809 Bacteria 2649
150 Ga0495600_0140435 3300046809 Bacteria 1567
151 Ga0495581_0004277 3300047315 Bacteria 8239
152 Ga0495581_0035589 3300047315 Bacteria 2881
153 Ga0495674_0162167 3300047319 Bacteria 1870
154 Ga0495676_0003792 3300047321 Bacteria 13741
155 Ga0495687_002348 3300047443 Bacteria 15362
156 Ga0495687_025415 3300047443 Bacteria 2800
157 Ga0495681_0001647 3300047470 Bacteria 16577
158 Ga0495593_0002753 3300047673 Bacteria 10583
159 Ga0495602_0306830 3300048088 Bacteria 1159
160 Ga0495614_0009685 3300048089 Bacteria 4257
161 Ga0495614_0011445 3300048089 Bacteria 3905
162 Ga0496101_0091449 3300048904 Bacteria 2264
163 Ga0496102_0031431 3300048905 Bacteria 4763
164 Ga0496102_0234419 3300048905 Bacteria 1730
165 Ga0496102_0528717 3300048905 Bacteria 1102
166 Ga0496103_0075969 3300048906 Bacteria 2107
167 Ga0496103_0085402 3300048906 Bacteria 1989
168 Ga0496104_0131253 3300048907 Bacteria 2406
169 Ga0496106_0380488 3300048909 Bacteria 1134
170 Ga0496107_0017389 3300048910 Bacteria 5058
171 Ga0496108_0320198 3300048911 Bacteria 1352
172 Ga0496108_0379967 3300048911 Bacteria 1233
173 Ga0496109_0011002 3300048912 Bacteria 7754
174 Ga0496109_0162271 3300048912 Bacteria 2094
175 Ga0496111_0084623 3300048914 Bacteria 2318
176 Ga0496112_0233094 3300048915 Bacteria 1795
177 Ga0496114_0157360 3300048917 Bacteria 1973
178 Ga0496114_0366184 3300048917 Bacteria 1275
179 Ga0496115_0109678 3300048918 Bacteria 2266
180 Ga0496117_0000069 3300048920 Bacteria 246025
181 Ga0496117_0010283 3300048920 Bacteria 8558
182 Ga0496118_0004642 3300048921 Bacteria 16117
183 Ga0496119_0000533 3300048922 Bacteria 51798
184 Ga0496119_0003682 3300048922 Bacteria 15713
185 Ga0496119_0006229 3300048922 Bacteria 11143
186 Ga0496120_0003183 3300048923 Bacteria 15281
187 Ga0496120_0005567 3300048923 Bacteria 10011
188 Ga0496120_0009264 3300048923 Bacteria 7009
189 Ga0496120_0097090 3300048923 Bacteria 1564
190 Ga0496121_0000015 3300048924 Bacteria 571958
191 Ga0496122_0000116 3300048925 Bacteria 183371
192 Ga0496122_0002751 3300048925 Bacteria 24280
193 Ga0496123_0000009 3300048926 Bacteria 509486
194 Ga0496123_0002733 3300048926 Bacteria 21149
195 Ga0496124_0000834 3300048927 Bacteria 50281
196 Ga0496125_0021232 3300048928 Bacteria 6064
197 Ga0496126_0003726 3300048929 Bacteria 19004
198 Ga0496126_0061913 3300048929 Bacteria 3359
199 Ga0501034_0000227 3300049571 Bacteria 106244
200 Ga0501034_0000449 3300049571 Bacteria 68103
201 Ga0501034_0000622 3300049571 Bacteria 55475
202 Ga0501034_0000777 3300049571 Bacteria 47762
203 Ga0501034_0002538 3300049571 Bacteria 21830
204 Ga0501070_0000276 3300049586 Bacteria 48266
205 Ga0501070_0000324 3300049586 Bacteria 43352
206 nmdc:mga03683_332_c2 3300050489 Bacteria 8974
207 nmdc:mga03n38_16430_c1 3300050490 Bacteria 2878
208 nmdc:mga00v17_117430_c1 3300050491 Bacteria 1692
209 nmdc:mga00v17_28728_c1 3300050491 Bacteria 2504
210 nmdc:mga00v17_33485_c1 3300050491 Bacteria 3044
211 nmdc:mga00v17_98967_c1 3300050491 Bacteria 1839
212 nmdc:mga0yw44_10014_c1 3300050492 Bacteria 4822
213 nmdc:mga0yw44_10265_c1 3300050492 Bacteria 4776
214 nmdc:mga0yw44_465_c1 3300050492 Bacteria 14382
215 nmdc:mga0yw44_5377_c1 3300050492 Bacteria 6035
216 nmdc:mga06z11_42142_c1 3300050494 Bacteria 2288
217 nmdc:mga06z11_50787_c1 3300050494 Bacteria 2121
218 nmdc:mga04h51_28182_c1 3300050495 Bacteria 1750
219 nmdc:mga0qj67_173118_c1 3300050509 Bacteria 1753
220 nmdc:mga0sz30_1505_c2 3300050516 Bacteria 7959
221 nmdc:mga0sz30_67512_c1 3300050516 Bacteria 1535
222 Ga0495619_0150362 3300053085 Bacteria 1606
223 Ga0500644_0011918 3300053088 Bacteria 2389
224 Ga0500644_0039991 3300053088 Bacteria 1549
225 Ga0500640_020943 3300053095 Bacteria 2815
226 Ga0500650_0071617 3300053098 Bacteria 1620
227 Ga0500660_023713 3300053100 Bacteria 3250
228 Ga0500556_0000008 3300053104 Bacteria 304943
229 Ga0500556_0000280 3300053104 Bacteria 40057
230 Ga0500560_000978 3300053107 Bacteria 4571
231 Ga0500572_037115 3300053111 Bacteria 1395
232 Ga0500593_003068 3300053117 Bacteria 6246
233 Ga0500594_0002662 3300053118 Bacteria 3882
234 Ga0500655_001102 3300053133 Bacteria 5176
235 Ga0500559_0000084 3300053136 Bacteria 74001
236 Ga0500559_0001321 3300053136 Bacteria 14286
237 Ga0500559_0037350 3300053136 Bacteria 2105
238 Ga0500568_0000003 3300053139 Bacteria 863587
239 Ga0500568_0001489 3300053139 Bacteria 14973
240 Ga0500573_0000043 3300053140 Bacteria 101932
241 Ga0500573_0000547 3300053140 Bacteria 16430
242 Ga0500573_0001792 3300053140 Bacteria 10446
243 Ga0500573_0008048 3300053140 Bacteria 5791
244 Ga0500573_0022980 3300053140 Bacteria 3580
245 Ga0500573_0038987 3300053140 Bacteria 2745
246 Ga0500573_0045950 3300053140 Bacteria 2517
247 Ga0500573_0066737 3300053140 Bacteria 2056
248 Ga0500573_0259814 3300053140 Bacteria 890
249 Ga0500577_0010352 3300053142 Bacteria 2743
250 Ga0500616_0000079 3300053153 Bacteria 200717
251 Ga0500616_0002228 3300053153 Bacteria 16574
252 Ga0500645_004096 3300053730 Bacteria 5702

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046616 Ga0495668_0093542 Ga0495668_0093542_24_755 242
2 3300053140 Ga0500573_0259814 Ga0500573_0259814_21_770 246
3 3300046460 Ga0495638_0025155 Ga0495638_0025155_429_1355 257
4 3300053088 Ga0500644_0039991 Ga0500644_0039991_34_960 257
5 3300049571 Ga0501034_0000622 Ga0501034_0000622_23482_24336 259
6 3300053136 Ga0500559_0000084 Ga0500559_0000084_44834_45682 259
7 3300046462 Ga0495651_0001067 Ga0495651_0001067_19934_20908 261
8 3300046473 Ga0495582_0022131 Ga0495582_0022131_2302_3276 261
9 3300046477 Ga0495664_0034225 Ga0495664_0034225_340_1314 261
10 3300046514 Ga0495618_0117866 Ga0495618_0117866_69_1043 261
11 3300046529 Ga0495652_0223798 Ga0495652_0223798_340_1314 261
12 3300046642 Ga0495634_0000948 Ga0495634_0000948_19934_20908 261
13 3300046663 Ga0495635_0000988 Ga0495635_0000988_8658_9632 261
14 3300046675 Ga0495657_0005109 Ga0495657_0005109_4482_5456 261
15 3300046680 Ga0495646_0007067 Ga0495646_0007067_988_1962 261
16 3300046689 Ga0495613_0000794 Ga0495613_0000794_19714_20688 261
17 3300046809 Ga0495600_0012865 Ga0495600_0012865_4006_4980 261
18 3300047321 Ga0495676_0003792 Ga0495676_0003792_7756_8730 261
19 3300047673 Ga0495593_0002753 Ga0495593_0002753_866_1840 261
20 3300048088 Ga0495602_0306830 Ga0495602_0306830_123_1097 261
21 3300048089 Ga0495614_0011445 Ga0495614_0011445_2680_3654 261
22 3300053085 Ga0495619_0150362 Ga0495619_0150362_78_1052 261
23 3300053095 Ga0500640_020943 Ga0500640_020943_1710_2684 261
24 3300053111 Ga0500572_037115 Ga0500572_037115_340_1314 261
25 3300028786 Ga0307517_10011228 Ga0307517_1001122811 262
26 3300028794 Ga0307515_10000025 Ga0307515_10000025183 262
27 3300030521 Ga0307511_10066546 Ga0307511_100665461 262
28 3300031616 Ga0307508_10033939 Ga0307508_100339393 262
29 3300033180 Ga0307510_10067003 Ga0307510_100670033 262
30 3300046459 Ga0495629_0018576 Ga0495629_0018576_1092_2030 262
31 3300046660 Ga0495625_0006398 Ga0495625_0006398_5304_6242 262
32 3300046674 Ga0495588_0017526 Ga0495588_0017526_209_1147 262
33 3300047470 Ga0495681_0001647 Ga0495681_0001647_15232_16170 262
34 3300048089 Ga0495614_0009685 Ga0495614_0009685_2898_3836 262
35 3300053107 Ga0500560_000978 Ga0500560_000978_567_1505 262
36 3300053140 Ga0500573_0045950 Ga0500573_0045950_1022_1873 262
37 3300013104 Ga0157370_10340266 Ga0157370_103402662 263
38 iso_pu_bacteria 2919171160 2919174298 265
39 3300033179 Ga0307507_10014047 Ga0307507_100140473 266
40 3300048920 Ga0496117_0010283 Ga0496117_0010283_3501_4352 266
41 3300048921 Ga0496118_0004642 Ga0496118_0004642_7923_8774 266
42 3300048922 Ga0496119_0006229 Ga0496119_0006229_9806_10657 266
43 3300048923 Ga0496120_0009264 Ga0496120_0009264_5401_6252 266
44 3300048925 Ga0496122_0000116 Ga0496122_0000116_151906_152757 266
45 3300048926 Ga0496123_0000009 Ga0496123_0000009_201185_202036 266
46 3300048929 Ga0496126_0061913 Ga0496126_0061913_2222_3073 266
47 iso_pu_bacteria 2643221591 2643966407 266
48 3300006846 Ga0075430_100068261 Ga0075430_1000682613 267
49 3300050509 nmdc:mga0qj67_173118_c1 nmdc:mga0qj67_173118_c1_151_1002 267
50 3300003203 JGI25406J46586_10017465 JGI25406J46586_100174652 268
51 3300003792 Ga0055540_1004603 Ga0055540_10046034 268
52 3300005985 Ga0081539_10001409 Ga0081539_1000140928 268
53 3300025292 Ga0209676_1006046 Ga0209676_10060464 268
54 3300025297 Ga0209758_1000115 Ga0209758_100011533 268
55 3300025303 Ga0209051_1002043 Ga0209051_10020438 268
56 3300025304 Ga0209257_1003191 Ga0209257_10031918 268
57 3300047443 Ga0495687_025415 Ga0495687_025415_1768_2670 268
58 3300053100 Ga0500660_023713 Ga0500660_023713_936_1838 268
59 3300031507 Ga0307509_10037563 Ga0307509_100375632 269
60 3300031838 Ga0307518_10022460 Ga0307518_100224602 269
61 3300049571 Ga0501034_0002538 Ga0501034_0002538_91_906 269
62 3300031838 Ga0307518_10071056 Ga0307518_100710562 270
63 3300028786 Ga0307517_10220362 Ga0307517_102203622 271
64 3300030521 Ga0307511_10000888 Ga0307511_1000088814 271
65 3300031507 Ga0307509_10023776 Ga0307509_100237764 271
66 3300031730 Ga0307516_10022656 Ga0307516_100226564 271
67 3300044658 Ga0466972_0074596 Ga0466972_0074596_548_1381 271
68 3300045049 Ga0466959_0097119 Ga0466959_0097119_142_975 271
69 3300046460 Ga0495638_0075231 Ga0495638_0075231_482_1354 271
70 3300047443 Ga0495687_002348 Ga0495687_002348_13626_14555 271
71 3300048905 Ga0496102_0528717 Ga0496102_0528717_271_1089 272
72 3300009545 Ga0105237_10267255 Ga0105237_102672552 273
73 3300013105 Ga0157369_10188589 Ga0157369_101885892 273
74 3300013307 Ga0157372_10443142 Ga0157372_104431422 273
75 3300028794 Ga0307515_10012244 Ga0307515_1001224414 273
76 3300030522 Ga0307512_10011778 Ga0307512_100117784 273
77 3300031456 Ga0307513_10007047 Ga0307513_100070477 273
78 3300031616 Ga0307508_10044292 Ga0307508_100442923 273
79 3300031730 Ga0307516_10130657 Ga0307516_101306572 273
80 3300046460 Ga0495638_0085461 Ga0495638_0085461_23_895 273
81 3300048904 Ga0496101_0091449 Ga0496101_0091449_472_1317 273
82 3300048905 Ga0496102_0234419 Ga0496102_0234419_501_1346 273
83 3300048906 Ga0496103_0075969 Ga0496103_0075969_472_1317 273
84 3300048907 Ga0496104_0131253 Ga0496104_0131253_939_1784 273
85 3300048910 Ga0496107_0017389 Ga0496107_0017389_3708_4553 273
86 3300048911 Ga0496108_0320198 Ga0496108_0320198_462_1307 273
87 3300048912 Ga0496109_0011002 Ga0496109_0011002_3993_4838 273
88 3300048914 Ga0496111_0084623 Ga0496111_0084623_874_1719 273
89 3300048917 Ga0496114_0157360 Ga0496114_0157360_604_1449 273
90 3300048918 Ga0496115_0109678 Ga0496115_0109678_651_1496 273
91 3300048923 Ga0496120_0097090 Ga0496120_0097090_195_1040 273
92 3300053088 Ga0500644_0011918 Ga0500644_0011918_662_1534 273
93 3300053098 Ga0500650_0071617 Ga0500650_0071617_17_889 273
94 3300053118 Ga0500594_0002662 Ga0500594_0002662_152_1024 273
95 3300053730 Ga0500645_004096 Ga0500645_004096_2695_3528 273
96 iso_pu_bacteria 2757320536 2758227358 273
97 iso_pu_bacteria 2906799679 2906802267 273
98 iso_pu_bacteria 8016254467 8016256393 273
99 3300049571 Ga0501034_0000227 Ga0501034_0000227_54102_54938 274
100 iso_pu_bacteria 2585428157 2588107738 274
101 3300048922 Ga0496119_0000533 Ga0496119_0000533_21211_22044 275
102 3300048924 Ga0496121_0000015 Ga0496121_0000015_470636_471469 275
103 3300050490 nmdc:mga03n38_16430_c1 nmdc:mga03n38_16430_c1_908_1738 275
104 3300050492 nmdc:mga0yw44_465_c1 nmdc:mga0yw44_465_c1_4899_5729 275
105 3300005367 Ga0070667_100044221 Ga0070667_1000442213 276
106 3300025302 Ga0207426_1019013 Ga0207426_10190132 276
107 3300025986 Ga0207658_10019854 Ga0207658_100198543 276
108 iso_pu_bacteria 2671180195 2671840165 276
109 iso_pu_bacteria 2773857922 2774858321 276
110 iso_pu_bacteria 2821268502 2821271268 276
111 3300005983 Ga0081540_1000579 Ga0081540_100057916 277
112 3300009036 Ga0105244_10081508 Ga0105244_100815082 277
113 3300025728 Ga0207655_1069268 Ga0207655_10692682 277
114 3300028794 Ga0307515_10003903 Ga0307515_1000390317 277
115 3300031616 Ga0307508_10023006 Ga0307508_100230065 277
116 3300048922 Ga0496119_0003682 Ga0496119_0003682_4287_5120 277
117 3300048923 Ga0496120_0005567 Ga0496120_0005567_3962_4795 277
118 3300049586 Ga0501070_0000276 Ga0501070_0000276_46993_47826 277
119 iso_pu_bacteria 2808606368 2808883890 277
120 iso_pu_bacteria 2833709550 2833711597 277
121 iso_pu_bacteria 2857720070 2857722705 277
122 iso_pu_bacteria 2984580707 2984583461 277
123 3300006038 Ga0075365_10005364 Ga0075365_100053645 278
124 3300006038 Ga0075365_10072459 Ga0075365_100724592 278
125 3300006042 Ga0075368_10010855 Ga0075368_100108553 278
126 3300006051 Ga0075364_10016752 Ga0075364_100167523 278
127 3300006178 Ga0075367_10001575 Ga0075367_100015754 278
128 3300006186 Ga0075369_10014666 Ga0075369_100146663 278
129 3300006186 Ga0075369_10075923 Ga0075369_100759232 278
130 3300006353 Ga0075370_10051263 Ga0075370_100512632 278
131 3300027866 Ga0209813_10012785 Ga0209813_100127853 278
132 3300031548 Ga0307408_100101768 Ga0307408_1001017681 278
133 3300031731 Ga0307405_10145772 Ga0307405_101457722 278
134 3300048911 Ga0496108_0379967 Ga0496108_0379967_328_1167 278
135 3300048912 Ga0496109_0162271 Ga0496109_0162271_911_1750 278
136 3300048917 Ga0496114_0366184 Ga0496114_0366184_142_981 278
137 3300048920 Ga0496117_0000069 Ga0496117_0000069_119204_120040 278
138 3300048923 Ga0496120_0003183 Ga0496120_0003183_10488_11324 278
139 3300048925 Ga0496122_0002751 Ga0496122_0002751_9755_10591 278
140 3300048926 Ga0496123_0002733 Ga0496123_0002733_9213_10049 278
141 3300048927 Ga0496124_0000834 Ga0496124_0000834_41157_41993 278
142 3300048928 Ga0496125_0021232 Ga0496125_0021232_3412_4248 278
143 3300048929 Ga0496126_0003726 Ga0496126_0003726_5220_6056 278
144 3300050492 nmdc:mga0yw44_10265_c1 nmdc:mga0yw44_10265_c1_3105_3944 278
145 3300050494 nmdc:mga06z11_42142_c1 nmdc:mga06z11_42142_c1_1201_2040 278
146 3300050495 nmdc:mga04h51_28182_c1 nmdc:mga04h51_28182_c1_820_1659 278
147 3300050516 nmdc:mga0sz30_67512_c1 nmdc:mga0sz30_67512_c1_80_919 278
148 iso_pu_bacteria 2857729791 2857731077 278
149 iso_pu_bacteria 2928121344 2928122355 278
150 iso_pu_bacteria 2945968032 2945970381 278
151 iso_pu_bacteria 2946041624 2946042765 278
152 iso_pu_bacteria 8046352972 8046353871 278
153 3300006038 Ga0075365_10152388 Ga0075365_101523882 279
154 3300006051 Ga0075364_10200620 Ga0075364_102006201 279
155 3300006178 Ga0075367_10022143 Ga0075367_100221431 279
156 3300037312 Ga0395899_0044612 Ga0395899_0044612_986_1834 279
157 3300037466 Ga0395898_0001449 Ga0395898_0001449_20158_21006 279
158 3300038443 Ga0395901_0013123 Ga0395901_0013123_6567_7415 279
159 3300046471 Ga0495650_0035444 Ga0495650_0035444_301_1143 279
160 3300046615 Ga0495656_0202263 Ga0495656_0202263_134_976 279
161 3300050491 nmdc:mga00v17_117430_c1 nmdc:mga00v17_117430_c1_832_1674 279
162 3300050494 nmdc:mga06z11_50787_c1 nmdc:mga06z11_50787_c1_1250_2092 279
163 3300053139 Ga0500568_0001489 Ga0500568_0001489_12104_12973 279
164 iso_pu_bacteria 8045830549 8045833668 279
165 3300005618 Ga0068864_100281224 Ga0068864_1002812242 280
166 3300005842 Ga0068858_100005940 Ga0068858_1000059408 280
167 3300005843 Ga0068860_100417226 Ga0068860_1004172262 280
168 3300005937 Ga0081455_10000482 Ga0081455_1000048237 280
169 3300013308 Ga0157375_10656600 Ga0157375_106566001 280
170 3300028381 Ga0268264_10047816 Ga0268264_100478162 280
171 3300050491 nmdc:mga00v17_98967_c1 nmdc:mga00v17_98967_c1_851_1696 280
172 iso_pu_bacteria 2585428157 2588107108 280
173 iso_pu_bacteria 2977251589 2977252207 280
174 3300031548 Ga0307408_100115050 Ga0307408_1001150502 281
175 3300031911 Ga0307412_10229447 Ga0307412_102294472 281
176 3300032126 Ga0307415_100163751 Ga0307415_1001637512 281
177 3300049586 Ga0501070_0000324 Ga0501070_0000324_27752_28600 281
178 iso_pu_bacteria 2728369276 2729908132 281
179 iso_pu_bacteria 2773857763 2774397901 281
180 iso_pu_bacteria 2811994872 2812324804 281
181 iso_pu_bacteria 2857733635 2857735281 281
182 iso_pu_bacteria 2939598168 2939601419 281
183 3300006186 Ga0075369_10095907 Ga0075369_100959072 282
184 3300032005 Ga0307411_10107027 Ga0307411_101070273 282
185 3300049571 Ga0501034_0000449 Ga0501034_0000449_20643_21494 282
186 3300006051 Ga0075364_10108909 Ga0075364_101089092 283
187 3300031548 Ga0307408_100288696 Ga0307408_1002886962 283
188 3300031901 Ga0307406_10001868 Ga0307406_100018686 283
189 3300031911 Ga0307412_10154395 Ga0307412_101543951 283
190 3300044658 Ga0466972_0033068 Ga0466972_0033068_1365_2219 283
191 3300044683 Ga0466965_0031825 Ga0466965_0031825_1007_1861 283
192 3300044765 Ga0466970_0014694 Ga0466970_0014694_154_1008 283
193 3300044901 Ga0466960_0175013 Ga0466960_0175013_95_949 283
194 3300053153 Ga0500616_0000079 Ga0500616_0000079_87827_88678 283
195 iso_pu_bacteria 2946041624 2946042059 283
196 3300006038 Ga0075365_10007052 Ga0075365_100070522 284
197 3300006051 Ga0075364_10018479 Ga0075364_100184792 284
198 3300006186 Ga0075369_10013570 Ga0075369_100135702 284
199 3300005337 Ga0070682_100341089 Ga0070682_1003410891 285
200 3300006038 Ga0075365_10009526 Ga0075365_100095264 285
201 3300006058 Ga0075432_10001412 Ga0075432_100014122 285
202 3300009098 Ga0105245_10113972 Ga0105245_101139721 285
203 3300025927 Ga0207687_10383992 Ga0207687_103839921 285
204 3300027907 Ga0207428_10091895 Ga0207428_100918952 285
205 3300031548 Ga0307408_100034766 Ga0307408_1000347662 285
206 3300031548 Ga0307408_100054509 Ga0307408_1000545092 285
207 3300031730 Ga0307516_10026461 Ga0307516_100264613 285
208 3300031731 Ga0307405_10078357 Ga0307405_100783572 285
209 3300031852 Ga0307410_10047324 Ga0307410_100473242 285
210 3300031852 Ga0307410_10218183 Ga0307410_102181832 285
211 3300031903 Ga0307407_10056895 Ga0307407_100568952 285
212 3300031911 Ga0307412_10189596 Ga0307412_101895962 285
213 3300032002 Ga0307416_100006773 Ga0307416_1000067732 285
214 3300046462 Ga0495651_0385755 Ga0495651_0385755_33_893 285
215 3300046476 Ga0495662_0009181 Ga0495662_0009181_1161_2021 285
216 3300046511 Ga0495608_0012081 Ga0495608_0012081_3370_4230 285
217 3300046522 Ga0495643_0105618 Ga0495643_0105618_22_882 285
218 3300046535 Ga0495586_0071565 Ga0495586_0071565_442_1302 285
219 3300046536 Ga0495587_0064951 Ga0495587_0064951_598_1458 285
220 3300046663 Ga0495635_0037595 Ga0495635_0037595_1156_2016 285
221 3300046674 Ga0495588_0005410 Ga0495588_0005410_35_895 285
222 3300046675 Ga0495657_0098539 Ga0495657_0098539_312_1172 285
223 3300046680 Ga0495646_0097534 Ga0495646_0097534_122_982 285
224 3300046683 Ga0495658_0051594 Ga0495658_0051594_132_992 285
225 3300046809 Ga0495600_0053014 Ga0495600_0053014_1314_2174 285
226 3300046809 Ga0495600_0140435 Ga0495600_0140435_414_1274 285
227 3300047315 Ga0495581_0004277 Ga0495581_0004277_6920_7780 285
228 3300047315 Ga0495581_0035589 Ga0495581_0035589_226_1086 285
229 3300047319 Ga0495674_0162167 Ga0495674_0162167_425_1285 285
230 3300048905 Ga0496102_0031431 Ga0496102_0031431_1641_2501 285
231 3300048906 Ga0496103_0085402 Ga0496103_0085402_339_1199 285
232 3300048915 Ga0496112_0233094 Ga0496112_0233094_212_1072 285
233 3300050492 nmdc:mga0yw44_5377_c1 nmdc:mga0yw44_5377_c1_947_1822 285
234 3300053140 Ga0500573_0038987 Ga0500573_0038987_1753_2613 285
235 3300005367 Ga0070667_100053254 Ga0070667_1000532542 286
236 3300006051 Ga0075364_10055365 Ga0075364_100553652 286
237 3300006177 Ga0075362_10017325 Ga0075362_100173252 286
238 3300006353 Ga0075370_10025277 Ga0075370_100252772 286
239 3300025986 Ga0207658_10046889 Ga0207658_100468892 286
240 3300028794 Ga0307515_10000038 Ga0307515_10000038259 286
241 3300030522 Ga0307512_10001544 Ga0307512_1000154418 286
242 3300031507 Ga0307509_10013267 Ga0307509_100132672 286
243 3300031730 Ga0307516_10067876 Ga0307516_100678762 286
244 3300033179 Ga0307507_10008897 Ga0307507_100088977 286
245 3300039450 Ga0436363_0470794 Ga0436363_0470794_381_1244 286
246 3300046615 Ga0495656_0122041 Ga0495656_0122041_265_1134 286
247 3300050489 nmdc:mga03683_332_c2 nmdc:mga03683_332_c2_2942_3805 286
248 3300050491 nmdc:mga00v17_28728_c1 nmdc:mga00v17_28728_c1_1017_1880 286
249 3300053104 Ga0500556_0000008 Ga0500556_0000008_135836_136705 286
250 3300053136 Ga0500559_0037350 Ga0500559_0037350_29_907 286
251 3300053139 Ga0500568_0000003 Ga0500568_0000003_171946_172815 286
252 3300053140 Ga0500573_0000043 Ga0500573_0000043_17043_17912 286
253 3300053140 Ga0500573_0001792 Ga0500573_0001792_1881_2759 286
254 3300053140 Ga0500573_0008048 Ga0500573_0008048_3688_4566 286
255 3300053140 Ga0500573_0022980 Ga0500573_0022980_31_909 286
256 3300053140 Ga0500573_0066737 Ga0500573_0066737_245_1123 286
257 3300053153 Ga0500616_0002228 Ga0500616_0002228_10486_11355 286
258 iso_pu_bacteria 2868088558 2868094631 286
259 3300049571 Ga0501034_0000777 Ga0501034_0000777_25540_26406 287
260 3300006038 Ga0075365_10000925 Ga0075365_100009258 288
261 3300006051 Ga0075364_10081427 Ga0075364_100814272 288
262 3300006186 Ga0075369_10010239 Ga0075369_100102392 288
263 3300020082 Ga0206353_10268478 Ga0206353_102684781 288
264 3300037312 Ga0395899_0001038 Ga0395899_0001038_9494_10363 288
265 3300046460 Ga0495638_0193782 Ga0495638_0193782_181_1050 288
266 3300050491 nmdc:mga00v17_33485_c1 nmdc:mga00v17_33485_c1_1380_2258 288
267 3300050492 nmdc:mga0yw44_10014_c1 nmdc:mga0yw44_10014_c1_3275_4150 288
268 3300050516 nmdc:mga0sz30_1505_c2 nmdc:mga0sz30_1505_c2_702_1577 288
269 3300053104 Ga0500556_0000280 Ga0500556_0000280_23037_23912 288
270 3300053117 Ga0500593_003068 Ga0500593_003068_3414_4289 288
271 3300053133 Ga0500655_001102 Ga0500655_001102_2793_3668 288
272 3300053136 Ga0500559_0001321 Ga0500559_0001321_2766_3641 288
273 3300053140 Ga0500573_0000547 Ga0500573_0000547_15471_16346 289
274 3300053142 Ga0500577_0010352 Ga0500577_0010352_1356_2234 289
275 iso_pu_bacteria 2868088558 2868089358 290
276 iso_pu_bacteria 2842482326 2842484230 320
277 3300009551 Ga0105238_10114607 Ga0105238_101146072 323
278 3300048909 Ga0496106_0380488 Ga0496106_0380488_80_1051 323
279 3300002737 JGI25162J39368_1004882 JGI25162J39368_10048823 324
280 3300003214 JGI25165J46597_1002273 JGI25165J46597_10022731 324
281 3300025233 Ga0209437_100064 Ga0209437_10006439 324
282 3300025261 Ga0209233_1000081 Ga0209233_1000081263 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

27

178

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9482 4 258
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9399 4 261
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9343 6 239
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9342 6 254
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9333 4 258
ID Description Score Start End Superfamily
af_Q2FVF1_1_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9615 6 261 3.40.50.300
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9587 4 263 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9565 4 258 3.40.50.300
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.955 4 263 3.40.50.300
af_Q2FVF1_1_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9539 6 261 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V9JJK2-F1-model_v4 ABC transporter domain-containing protein 0.97 2 269 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A0L7TGS5-F1-model_v4 Peptide ABC transporter ATPase 0.9698 1 232 GO:0005524
GO:0016887
GO:0055085
AF-A0A7X8NBI1-F1-model_v4 deleted 0.966 6 255
AF-A0A0L7TGS5-F1-model_v4 Peptide ABC transporter ATPase 0.9657 1 232 GO:0005524
GO:0016887
GO:0055085
AF-A0A518BZK9-F1-model_v4 Oligopeptide transport ATP-binding protein OppF 0.965 4 264 GO:0005524
GO:0015833
GO:0016887
GO:0055085

Feature Viewer

pLDDT pTM Quality
77.35 0.77 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map