F384805

General Info

Members Datasets Scaffolds Average Seq Length
282 191 564 386

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100072359|Ga0070679_1000723592
Length 417
Sequence MLDPTAGAGPNRDMADVAPTESESQDTTQPAAPVFAPETGSCLTIDLGAIAANWKLLDRRATPVECAAVVKSNAYGCGIEAVTTTLVAAGCRTFFVADLAEARQVRALAPEAAIYVLNGLLPGTPPAYADCYARPVIGSLIELAEWDTFCNARDWRGGAALHVDTGMNRLGINPQEAAALAGRVQTERHGLTLLMSHLACADTPEHPLNDRQIRLFREVRAYFRGIPSSLANSSGIFLDDSTHCDLLRPGLALYGANPTPYRDNPMNPVISLVARIVQIRSVPRGETVGYGAAWTAPRITRLAVVAAGYGDGYARANGAIDGDTGADAMVAGQRCPVIGRVSMDLLAIDITNLPEHAAHRGDLVTLIGGDVTLDEVAANAGLIPYEVLTGLGRHRGRQYIAAPAETDAAPSRRGKRR

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
69 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
70 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
71 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
72 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
75 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
76 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
77 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
98 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
99 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
119 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
120 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
179 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
180 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
181 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
184 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
188 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
189 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
190 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
191 2932401849 Devosia sp. 2618 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.23
Metatranscriptomes 0
Isolates 1.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.03
Nodule 0.35
Rhizoplane 7.09
Rhizosphere 84.75
Stem 0
Stem Tuber 0.35
Unclassified 0.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100072359 3300005530 Bacteria 3439
2 Ga0070658_10103643 3300005327 Bacteria 2353
3 Ga0070691_10063690 3300005341 Bacteria 1778
4 Ga0070671_100017660 3300005355 Bacteria 5781
5 Ga0070673_100130708 3300005364 Bacteria 2106
6 Ga0070709_10003261 3300005434 Bacteria 8717
7 Ga0070709_10179475 3300005434 Bacteria 1486
8 Ga0070681_10022875 3300005458 Bacteria 6281
9 Ga0070707_100010180 3300005468 Bacteria 8753
10 Ga0070698_100055153 3300005471 Bacteria 4032
11 Ga0068859_100066615 3300005617 Bacteria 3636
12 Ga0068861_100000004 3300005719 Bacteria 105907
13 Ga0068863_100133025 3300005841 Bacteria 2375
14 Ga0068863_100381559 3300005841 Bacteria 1376
15 Ga0068858_100071178 3300005842 Bacteria 3225
16 Ga0068860_100096635 3300005843 Bacteria 2816
17 Ga0081455_10003233 3300005937 Bacteria 18873
18 Ga0081455_10026801 3300005937 Bacteria 5293
19 Ga0081455_10119206 3300005937 Bacteria 2081
20 Ga0081540_1000015 3300005983 Bacteria 178704
21 Ga0070717_10264279 3300006028 Bacteria 1523
22 Ga0075365_10010427 3300006038 Bacteria 5413
23 Ga0075364_10088336 3300006051 Bacteria 2055
24 Ga0070712_100235323 3300006175 Bacteria 1456
25 Ga0075362_10028311 3300006177 Bacteria 2406
26 Ga0068871_100094803 3300006358 Bacteria 2491
27 Ga0068871_100154328 3300006358 Bacteria 1960
28 Ga0075428_100141369 3300006844 Bacteria 2617
29 Ga0075428_100164657 3300006844 Bacteria 2406
30 Ga0075430_100000268 3300006846 Bacteria 36751
31 Ga0075430_100147337 3300006846 Bacteria 1960
32 Ga0075431_100005548 3300006847 Bacteria 12455
33 Ga0075431_100015641 3300006847 Bacteria 7690
34 Ga0075433_10000975 3300006852 Bacteria 20309
35 Ga0075433_10100271 3300006852 Bacteria 2564
36 Ga0075434_100001139 3300006871 Bacteria 21911
37 Ga0075429_100002983 3300006880 Bacteria 14357
38 Ga0097620_100066615 3300006931 Bacteria 3636
39 Ga0075435_100020368 3300007076 Bacteria 5081
40 Ga0075435_100036008 3300007076 Bacteria 3931
41 Ga0075435_100042350 3300007076 Bacteria 3643
42 Ga0111539_10000528 3300009094 Bacteria 48456
43 Ga0111539_10082683 3300009094 Bacteria 3777
44 Ga0105245_10074098 3300009098 Bacteria 3097
45 Ga0114129_10001477 3300009147 Bacteria 31843
46 Ga0114129_10012664 3300009147 Bacteria 12010
47 Ga0114129_10082993 3300009147 Bacteria 4453
48 Ga0114129_10266128 3300009147 Bacteria 2295
49 Ga0105242_10058999 3300009176 Bacteria 3148
50 Ga0105248_10154750 3300009177 Bacteria 2587
51 Ga0105237_10324337 3300009545 Bacteria 1544
52 Ga0105239_10135652 3300010375 Bacteria 2740
53 Ga0157374_10034834 3300013296 Bacteria 4602
54 Ga0163162_10033333 3300013306 Bacteria 5117
55 Ga0157375_10080179 3300013308 Bacteria 3301
56 Ga0157379_10020301 3300014968 Bacteria 5874
57 Ga0209148_1000835 3300025254 Bacteria 22026
58 Ga0209455_1003031 3300025272 Bacteria 6150
59 Ga0207699_10065832 3300025906 Bacteria 2198
60 Ga0207705_10084521 3300025909 Bacteria 2317
61 Ga0207707_10035135 3300025912 Bacteria 4383
62 Ga0207693_10029561 3300025915 Bacteria 4326
63 Ga0207693_10116513 3300025915 Bacteria 2098
64 Ga0207663_10046754 3300025916 Bacteria 2668
65 Ga0207646_10029610 3300025922 Bacteria 4972
66 Ga0207700_10201350 3300025928 Bacteria 1678
67 Ga0207665_10067670 3300025939 Bacteria 2433
68 Ga0207691_10202584 3300025940 Bacteria 1727
69 Ga0207679_10130508 3300025945 Bacteria 2015
70 Ga0207703_10280855 3300026035 Bacteria 1512
71 Ga0207678_10041820 3300026067 Bacteria 3973
72 Ga0207678_10288001 3300026067 Bacteria 1410
73 Ga0207641_10139714 3300026088 Bacteria 2184
74 Ga0207675_100000032 3300026118 Bacteria 108677
75 Ga0207683_10005237 3300026121 Bacteria 11135
76 Ga0207428_10000291 3300027907 Bacteria 67245
77 Ga0268266_10058871 3300028379 Bacteria 3309
78 Ga0268264_10284729 3300028381 Bacteria 1550
79 Ga0265325_10002293 3300031241 Bacteria 12974
80 Ga0265325_10010573 3300031241 Bacteria 5339
81 Ga0265340_10009861 3300031247 Bacteria 5118
82 Ga0265339_10004124 3300031249 Bacteria 10016
83 Ga0265313_10000183 3300031595 Bacteria 66629
84 Ga0265314_10029002 3300031711 Bacteria 4118
85 Ga0307409_100198707 3300031995 Bacteria 1792
86 Ga0373926_0009523 3300035083 Bacteria 3246
87 Ga0373934_0022337 3300035086 Bacteria 2441
88 Ga0373944_0002793 3300035089 Bacteria 4468
89 Ga0373936_0059254 3300035113 Bacteria 1560
90 Ga0373945_0008765 3300035116 Bacteria 3301
91 Ga0373954_0038207 3300035118 Bacteria 2232
92 Ga0373957_0068656 3300035120 Bacteria 1383
93 Ga0373946_0010112 3300035171 Bacteria 3488
94 Ga0373955_0004026 3300035172 Bacteria 6485
95 Ga0373955_0029449 3300035172 Bacteria 2855
96 Ga0373955_0080033 3300035172 Bacteria 1844
97 Ga0373924_0025546 3300035410 Bacteria 2336
98 Ga0373924_0045338 3300035410 Bacteria 1809
99 Ga0373931_0012187 3300035691 Bacteria 4163
100 Ga0373933_0055289 3300035724 Bacteria 2380
101 Ga0373933_0071465 3300035724 Bacteria 2113
102 Ga0373947_0112480 3300035725 Bacteria 1722
103 Ga0373937_0006102 3300036401 Bacteria 10371
104 Ga0373937_0009649 3300036401 Bacteria 8404
105 Ga0373937_0147059 3300036401 Bacteria 2206
106 Ga0395899_0149800 3300037312 Bacteria 1654
107 Ga0395900_0029839 3300037418 Bacteria 5597
108 Ga0395901_0015265 3300038443 Bacteria 7814
109 Ga0466959_0094537 3300045049 Bacteria 2144
110 Ga0495617_011468 3300046452 Bacteria 3023
111 Ga0495592_0007543 3300046454 Bacteria 8148
112 Ga0495592_0019838 3300046454 Bacteria 5111
113 Ga0495603_0081772 3300046455 Bacteria 1892
114 Ga0495603_0124594 3300046455 Bacteria 1501
115 Ga0495629_0042633 3300046459 Bacteria 3187
116 Ga0495641_0037108 3300046461 Bacteria 2286
117 Ga0495651_0007002 3300046462 Bacteria 8625
118 Ga0495651_0016354 3300046462 Bacteria 5745
119 Ga0495651_0021728 3300046462 Bacteria 4988
120 Ga0495653_0022336 3300046463 Bacteria 5120
121 Ga0495653_0129245 3300046463 Bacteria 1790
122 Ga0495582_0034537 3300046473 Bacteria 2779
123 Ga0495662_0013309 3300046476 Bacteria 4004
124 Ga0495664_0018907 3300046477 Bacteria 3955
125 Ga0495664_0040083 3300046477 Bacteria 2768
126 Ga0495664_0064401 3300046477 Bacteria 2185
127 Ga0495664_0085264 3300046477 Bacteria 1896
128 Ga0495584_0018755 3300046491 Bacteria 3517
129 Ga0495585_0001303 3300046492 Bacteria 19900
130 Ga0495594_0024063 3300046499 Bacteria 3268
131 Ga0495607_0012831 3300046501 Bacteria 5510
132 Ga0495608_0001144 3300046511 Bacteria 18769
133 Ga0495608_0140560 3300046511 Bacteria 1541
134 Ga0495616_0025190 3300046513 Bacteria 3182
135 Ga0495618_0005230 3300046514 Bacteria 7931
136 Ga0495618_0029165 3300046514 Bacteria 3441
137 Ga0495618_0061177 3300046514 Bacteria 2388
138 Ga0495618_0084649 3300046514 Bacteria 2026
139 Ga0495628_0009682 3300046516 Bacteria 8222
140 Ga0495630_0177140 3300046517 Bacteria 1625
141 Ga0495631_0050453 3300046518 Bacteria 1820
142 Ga0495652_0030555 3300046529 Bacteria 4723
143 Ga0495652_0173085 3300046529 Bacteria 1664
144 Ga0495665_0024311 3300046531 Bacteria 3254
145 Ga0495665_0027432 3300046531 Bacteria 3056
146 Ga0495665_0053692 3300046531 Bacteria 2130
147 Ga0495665_0166126 3300046531 Unclassified 1150
148 Ga0495640_0017162 3300046533 Bacteria 5401
149 Ga0495640_0031219 3300046533 Bacteria 3804
150 Ga0495586_0005156 3300046535 Bacteria 6994
151 Ga0495587_0001492 3300046536 Bacteria 15604
152 Ga0495645_0004397 3300046543 Bacteria 9631
153 Ga0495633_0000643 3300046558 Bacteria 32448
154 Ga0495667_0004005 3300046559 Bacteria 9893
155 Ga0495656_0000854 3300046615 Bacteria 9834
156 Ga0495634_0027564 3300046642 Bacteria 3951
157 Ga0495634_0040345 3300046642 Bacteria 3176
158 Ga0495634_0049544 3300046642 Bacteria 2824
159 Ga0495634_0050826 3300046642 Bacteria 2782
160 Ga0495611_0019700 3300046648 Bacteria 2899
161 Ga0495635_0005657 3300046663 Bacteria 8704
162 Ga0495635_0022453 3300046663 Bacteria 4394
163 Ga0495635_0056231 3300046663 Bacteria 2709
164 Ga0495659_0027056 3300046664 Bacteria 1976
165 Ga0495659_0027757 3300046664 Bacteria 1955
166 Ga0495661_0072098 3300046665 Bacteria 2016
167 Ga0495588_0002869 3300046674 Bacteria 7420
168 Ga0495657_0004695 3300046675 Bacteria 10887
169 Ga0495657_0076701 3300046675 Bacteria 2170
170 Ga0495599_0006227 3300046678 Bacteria 7191
171 Ga0495599_0010696 3300046678 Bacteria 5618
172 Ga0495599_0036412 3300046678 Bacteria 3090
173 Ga0495623_0015395 3300046679 Bacteria 4943
174 Ga0495646_0002150 3300046680 Bacteria 11975
175 Ga0495646_0036738 3300046680 Bacteria 3033
176 Ga0495624_0143599 3300046690 Bacteria 1461
177 Ga0495670_0008537 3300046691 Bacteria 5043
178 Ga0495600_0010467 3300046809 Bacteria 5759
179 Ga0495600_0024122 3300046809 Bacteria 3914
180 Ga0495600_0025338 3300046809 Bacteria 3823
181 Ga0495600_0187482 3300046809 Bacteria 1331
182 Ga0495581_0026017 3300047315 Bacteria 3394
183 Ga0495581_0049857 3300047315 Bacteria 2418
184 Ga0495581_0167530 3300047315 Bacteria 1285
185 Ga0495604_0016514 3300047317 Bacteria 5902
186 Ga0495674_0008243 3300047319 Bacteria 9941
187 Ga0495674_0050549 3300047319 Bacteria 3668
188 Ga0495674_0059466 3300047319 Bacteria 3337
189 Ga0495680_0001729 3300047322 Bacteria 23181
190 Ga0495680_0004496 3300047322 Bacteria 13333
191 Ga0495680_0010928 3300047322 Bacteria 8067
192 Ga0495680_0026953 3300047322 Bacteria 4729
193 Ga0495675_0001401 3300047444 Bacteria 14601
194 Ga0495675_0030736 3300047444 Bacteria 3427
195 Ga0495679_029923 3300047446 Bacteria 1772
196 Ga0495684_0029862 3300047471 Bacteria 4184
197 Ga0495593_0026041 3300047673 Bacteria 3233
198 Ga0495602_0006038 3300048088 Bacteria 12713
199 Ga0496100_0015803 3300048903 Bacteria 4415
200 Ga0496101_0085417 3300048904 Bacteria 2338
201 Ga0496102_0066765 3300048905 Bacteria 3297
202 Ga0496102_0187347 3300048905 Bacteria 1950
203 Ga0496103_0045354 3300048906 Bacteria 2713
204 Ga0496104_0000145 3300048907 Bacteria 65454
205 Ga0496104_0020171 3300048907 Bacteria 6106
206 Ga0496104_0045924 3300048907 Bacteria 4110
207 Ga0496105_0002007 3300048908 Bacteria 14681
208 Ga0496105_0029107 3300048908 Bacteria 4520
209 Ga0496106_0003383 3300048909 Bacteria 11886
210 Ga0496107_0007113 3300048910 Bacteria 7708
211 Ga0496107_0135745 3300048910 Bacteria 1817
212 Ga0496110_0085454 3300048913 Bacteria 2816
213 Ga0496110_0146549 3300048913 Bacteria 2136
214 Ga0496111_0213650 3300048914 Unclassified 1433
215 Ga0496114_0079043 3300048917 Bacteria 2775
216 Ga0496115_0017763 3300048918 Bacteria 5446
217 Ga0496115_0087828 3300048918 Bacteria 2537
218 Ga0496115_0103071 3300048918 Bacteria 2340
219 Ga0496125_0047171 3300048928 Bacteria 3606
220 Ga0496125_0078304 3300048928 Bacteria 2542
221 Ga0496126_0022010 3300048929 Bacteria 6213
222 Ga0501034_0104766 3300049571 Bacteria 2822
223 Ga0501038_0137467 3300049574 Bacteria 2001
224 Ga0501039_0279550 3300049575 Bacteria 1312
225 Ga0501046_0076604 3300049580 Bacteria 2591
226 Ga0501070_0177547 3300049586 Bacteria 1753
227 Ga0501070_0196448 3300049586 Bacteria 1657
228 Ga0501073_0061083 3300049589 Bacteria 2630
229 Ga0501073_0070512 3300049589 Bacteria 2435
230 Ga0501076_0086662 3300049592 Bacteria 2517
231 Ga0501079_0065790 3300049741 Bacteria 2797
232 Ga0501083_0146028 3300049744 Bacteria 1549
233 Ga0501035_0133361 3300049822 Bacteria 2164
234 Ga0501044_0228240 3300049823 Bacteria 1810
235 Ga0501044_0274414 3300049823 Bacteria 1621
236 nmdc:mga00v17_24699_c1 3300050491 Bacteria 2373
237 nmdc:mga0yw44_16248_c1 3300050492 Bacteria 4017
238 nmdc:mga05p37_25697_c1 3300050507 Bacteria 7161
239 nmdc:mga05p37_262_c1 3300050507 Bacteria 49144
240 nmdc:mga05p37_266921_c1 3300050507 Bacteria 2046
241 nmdc:mga09592_4178_c1 3300050508 Bacteria 11662
242 nmdc:mga0qj67_1846_c1 3300050509 Bacteria 15000
243 nmdc:mga06r32_122920_c1 3300050510 Bacteria 2561
244 nmdc:mga06r32_510_c1 3300050510 Bacteria 33391
245 nmdc:mga06r32_53567_c1 3300050510 Bacteria 3865
246 nmdc:mga08y16_2367_c1 3300050511 Bacteria 19360
247 nmdc:mga0n895_106_c1 3300050512 Bacteria 49191
248 nmdc:mga0n895_14258_c1 3300050512 Bacteria 7212
249 nmdc:mga0n895_29324_c1 3300050512 Bacteria 5247
250 nmdc:mga0rr50_22663_c1 3300050513 Bacteria 4315
251 nmdc:mga0rr50_80731_c1 3300050513 Bacteria 2508
252 nmdc:mga0a205_1025_c1 3300050515 Bacteria 23241
253 nmdc:mga0a205_33010_c1 3300050515 Bacteria 4964
254 nmdc:mga0sz30_4054_c1 3300050516 Bacteria 5275
255 Ga0495601_0000248 3300053077 Bacteria 28877
256 Ga0495601_0001833 3300053077 Bacteria 11797
257 Ga0495601_0002177 3300053077 Bacteria 11031
258 Ga0495612_0000231 3300053078 Bacteria 23627
259 Ga0495612_0000709 3300053078 Bacteria 13517
260 Ga0495612_0019562 3300053078 Bacteria 2711
261 Ga0495595_0003404 3300053084 Bacteria 6319
262 Ga0495595_0025183 3300053084 Bacteria 2634
263 Ga0495619_0002240 3300053085 Bacteria 12799
264 Ga0495619_0004148 3300053085 Bacteria 9261
265 Ga0495619_0004601 3300053085 Bacteria 8806
266 Ga0495619_0006276 3300053085 Bacteria 7540
267 Ga0495619_0049751 3300053085 Bacteria 2764
268 Ga0500641_0002807 3300053096 Bacteria 6173
269 Ga0500555_001311 3300053103 Bacteria 7856
270 Ga0500595_017614 3300053119 Bacteria 2632
271 Ga0500597_060253 3300053120 Bacteria 1630
272 Ga0500652_000042 3300053131 Bacteria 67099
273 Ga0500622_0096850 3300053156 Bacteria 1458
274 Ga0500624_000062 3300053157 Bacteria 66317
275 Ga0500637_0000851 3300053178 Bacteria 12214
276 Ga0500645_000368 3300053730 Bacteria 31673
277 Ga0501082_0078335 3300060353 Bacteria 2851
278 2715499235 2713897090 Bacteria 3353799
279 2855021656 2855020534 Bacteria 3204685
280 2899259885 2899259804 Bacteria 3320927
281 2919499574 2919497567 Bacteria 4408621
282 2932403869 2932401849 Bacteria 4262978
283 Ga0070679_100072359
284 Ga0070658_10103643
285 Ga0070691_10063690
286 Ga0070671_100017660
287 Ga0070673_100130708
288 Ga0070709_10003261
289 Ga0070709_10179475
290 Ga0070681_10022875
291 Ga0070707_100010180
292 Ga0070698_100055153
293 Ga0068859_100066615
294 Ga0068861_100000004
295 Ga0068863_100133025
296 Ga0068863_100381559
297 Ga0068858_100071178
298 Ga0068860_100096635
299 Ga0081455_10003233
300 Ga0081455_10026801
301 Ga0081455_10119206
302 Ga0081540_1000015
303 Ga0070717_10264279
304 Ga0075365_10010427
305 Ga0075364_10088336
306 Ga0070712_100235323
307 Ga0075362_10028311
308 Ga0068871_100094803
309 Ga0068871_100154328
310 Ga0075428_100141369
311 Ga0075428_100164657
312 Ga0075430_100000268
313 Ga0075430_100147337
314 Ga0075431_100005548
315 Ga0075431_100015641
316 Ga0075433_10000975
317 Ga0075433_10100271
318 Ga0075434_100001139
319 Ga0075429_100002983
320 Ga0097620_100066615
321 Ga0075435_100020368
322 Ga0075435_100036008
323 Ga0075435_100042350
324 Ga0111539_10000528
325 Ga0111539_10082683
326 Ga0105245_10074098
327 Ga0114129_10001477
328 Ga0114129_10012664
329 Ga0114129_10082993
330 Ga0114129_10266128
331 Ga0105242_10058999
332 Ga0105248_10154750
333 Ga0105237_10324337
334 Ga0105239_10135652
335 Ga0157374_10034834
336 Ga0163162_10033333
337 Ga0157375_10080179
338 Ga0157379_10020301
339 Ga0209148_1000835
340 Ga0209455_1003031
341 Ga0207699_10065832
342 Ga0207705_10084521
343 Ga0207707_10035135
344 Ga0207693_10029561
345 Ga0207693_10116513
346 Ga0207663_10046754
347 Ga0207646_10029610
348 Ga0207700_10201350
349 Ga0207665_10067670
350 Ga0207691_10202584
351 Ga0207679_10130508
352 Ga0207703_10280855
353 Ga0207678_10041820
354 Ga0207678_10288001
355 Ga0207641_10139714
356 Ga0207675_100000032
357 Ga0207683_10005237
358 Ga0207428_10000291
359 Ga0268266_10058871
360 Ga0268264_10284729
361 Ga0265325_10002293
362 Ga0265325_10010573
363 Ga0265340_10009861
364 Ga0265339_10004124
365 Ga0265313_10000183
366 Ga0265314_10029002
367 Ga0307409_100198707
368 Ga0373926_0009523
369 Ga0373934_0022337
370 Ga0373944_0002793
371 Ga0373936_0059254
372 Ga0373945_0008765
373 Ga0373954_0038207
374 Ga0373957_0068656
375 Ga0373946_0010112
376 Ga0373955_0004026
377 Ga0373955_0029449
378 Ga0373955_0080033
379 Ga0373924_0025546
380 Ga0373924_0045338
381 Ga0373931_0012187
382 Ga0373933_0055289
383 Ga0373933_0071465
384 Ga0373947_0112480
385 Ga0373937_0006102
386 Ga0373937_0009649
387 Ga0373937_0147059
388 Ga0395899_0149800
389 Ga0395900_0029839
390 Ga0395901_0015265
391 Ga0466959_0094537
392 Ga0495617_011468
393 Ga0495592_0007543
394 Ga0495592_0019838
395 Ga0495603_0081772
396 Ga0495603_0124594
397 Ga0495629_0042633
398 Ga0495641_0037108
399 Ga0495651_0007002
400 Ga0495651_0016354
401 Ga0495651_0021728
402 Ga0495653_0022336
403 Ga0495653_0129245
404 Ga0495582_0034537
405 Ga0495662_0013309
406 Ga0495664_0018907
407 Ga0495664_0040083
408 Ga0495664_0064401
409 Ga0495664_0085264
410 Ga0495584_0018755
411 Ga0495585_0001303
412 Ga0495594_0024063
413 Ga0495607_0012831
414 Ga0495608_0001144
415 Ga0495608_0140560
416 Ga0495616_0025190
417 Ga0495618_0005230
418 Ga0495618_0029165
419 Ga0495618_0061177
420 Ga0495618_0084649
421 Ga0495628_0009682
422 Ga0495630_0177140
423 Ga0495631_0050453
424 Ga0495652_0030555
425 Ga0495652_0173085
426 Ga0495665_0024311
427 Ga0495665_0027432
428 Ga0495665_0053692
429 Ga0495665_0166126
430 Ga0495640_0017162
431 Ga0495640_0031219
432 Ga0495586_0005156
433 Ga0495587_0001492
434 Ga0495645_0004397
435 Ga0495633_0000643
436 Ga0495667_0004005
437 Ga0495656_0000854
438 Ga0495634_0027564
439 Ga0495634_0040345
440 Ga0495634_0049544
441 Ga0495634_0050826
442 Ga0495611_0019700
443 Ga0495635_0005657
444 Ga0495635_0022453
445 Ga0495635_0056231
446 Ga0495659_0027056
447 Ga0495659_0027757
448 Ga0495661_0072098
449 Ga0495588_0002869
450 Ga0495657_0004695
451 Ga0495657_0076701
452 Ga0495599_0006227
453 Ga0495599_0010696
454 Ga0495599_0036412
455 Ga0495623_0015395
456 Ga0495646_0002150
457 Ga0495646_0036738
458 Ga0495624_0143599
459 Ga0495670_0008537
460 Ga0495600_0010467
461 Ga0495600_0024122
462 Ga0495600_0025338
463 Ga0495600_0187482
464 Ga0495581_0026017
465 Ga0495581_0049857
466 Ga0495581_0167530
467 Ga0495604_0016514
468 Ga0495674_0008243
469 Ga0495674_0050549
470 Ga0495674_0059466
471 Ga0495680_0001729
472 Ga0495680_0004496
473 Ga0495680_0010928
474 Ga0495680_0026953
475 Ga0495675_0001401
476 Ga0495675_0030736
477 Ga0495679_029923
478 Ga0495684_0029862
479 Ga0495593_0026041
480 Ga0495602_0006038
481 Ga0496100_0015803
482 Ga0496101_0085417
483 Ga0496102_0066765
484 Ga0496102_0187347
485 Ga0496103_0045354
486 Ga0496104_0000145
487 Ga0496104_0020171
488 Ga0496104_0045924
489 Ga0496105_0002007
490 Ga0496105_0029107
491 Ga0496106_0003383
492 Ga0496107_0007113
493 Ga0496107_0135745
494 Ga0496110_0085454
495 Ga0496110_0146549
496 Ga0496111_0213650
497 Ga0496114_0079043
498 Ga0496115_0017763
499 Ga0496115_0087828
500 Ga0496115_0103071
501 Ga0496125_0047171
502 Ga0496125_0078304
503 Ga0496126_0022010
504 Ga0501034_0104766
505 Ga0501038_0137467
506 Ga0501039_0279550
507 Ga0501046_0076604
508 Ga0501070_0177547
509 Ga0501070_0196448
510 Ga0501073_0061083
511 Ga0501073_0070512
512 Ga0501076_0086662
513 Ga0501079_0065790
514 Ga0501083_0146028
515 Ga0501035_0133361
516 Ga0501044_0228240
517 Ga0501044_0274414
518 nmdc:mga00v17_24699_c1
519 nmdc:mga0yw44_16248_c1
520 nmdc:mga05p37_25697_c1
521 nmdc:mga05p37_262_c1
522 nmdc:mga05p37_266921_c1
523 nmdc:mga09592_4178_c1
524 nmdc:mga0qj67_1846_c1
525 nmdc:mga06r32_122920_c1
526 nmdc:mga06r32_510_c1
527 nmdc:mga06r32_53567_c1
528 nmdc:mga08y16_2367_c1
529 nmdc:mga0n895_106_c1
530 nmdc:mga0n895_14258_c1
531 nmdc:mga0n895_29324_c1
532 nmdc:mga0rr50_22663_c1
533 nmdc:mga0rr50_80731_c1
534 nmdc:mga0a205_1025_c1
535 nmdc:mga0a205_33010_c1
536 nmdc:mga0sz30_4054_c1
537 Ga0495601_0000248
538 Ga0495601_0001833
539 Ga0495601_0002177
540 Ga0495612_0000231
541 Ga0495612_0000709
542 Ga0495612_0019562
543 Ga0495595_0003404
544 Ga0495595_0025183
545 Ga0495619_0002240
546 Ga0495619_0004148
547 Ga0495619_0004601
548 Ga0495619_0006276
549 Ga0495619_0049751
550 Ga0500641_0002807
551 Ga0500555_001311
552 Ga0500595_017614
553 Ga0500597_060253
554 Ga0500652_000042
555 Ga0500622_0096850
556 Ga0500624_000062
557 Ga0500637_0000851
558 Ga0500645_000368
559 Ga0501082_0078335
560 2715499235
561 2855021656
562 2899259885
563 2919499574
564 2932403869

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

45

258

0.94

PF00842

Ala_racemase_C

Alanine racemase, C-terminal domain

269

399

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kw3-assembly1.cif.gz_A crystal structure of alanine racemase from bartonella henselae with covalently bound pyridoxal phosphate 0.9338 28 389
3kw3-assembly1.cif.gz_B crystal structure of alanine racemase from bartonella henselae with covalently bound pyridoxal phosphate 0.9332 28 389
3kw3-assembly1.cif.gz_B crystal structure of alanine racemase from bartonella henselae with covalently bound pyridoxal phosphate 0.9282 28 389
4qhr-assembly1.cif.gz_A the structure of alanine racemase from acinetobacter baumannii 0.9272 28 389
3kw3-assembly1.cif.gz_A crystal structure of alanine racemase from bartonella henselae with covalently bound pyridoxal phosphate 0.926 28 389
ID Description Score Start End Superfamily
3kw3B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9446 37 244 3.20.20.10
2odoD01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9369 254 390 2.40.37.10
3kw3B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9274 37 244 3.20.20.10
5yycC01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9271 259 386 2.40.37.10
4y2wB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9263 37 241 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A537Q825-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9862 26 390 GO:0005829
GO:0008784
GO:0030170
GO:0030632
AF-K8PDD9-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9837 23 390 GO:0005829
GO:0008784
GO:0030170
GO:0030632
AF-A0A2S6U326-F1-model_v4 alanine racemase (EC 5.1.1.1) 0.9822 36 162 GO:0005829
GO:0008784
GO:0030170
GO:0030632
AF-A0A4Q8QKN9-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9777 21 390 GO:0005829
GO:0008784
GO:0030170
GO:0030632
AF-A0A2A4P9W7-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9776 25 386 GO:0005829
GO:0008784
GO:0030170
GO:0030632

Map