F384667

General Info

Members Datasets Scaffolds Average Seq Length
282 168 259 203

Family's Representative Sequence

Representative Sequence 3300001979|JGI24740J21852_10035311|JGI24740J21852_100353112
Length 203
Sequence MKIIAIGRNYAEHAKELNNPVPTTPVIFMKPDTALLKENKPFYHPDFSEDVHHEIELVLKISKEGKHISEKFAANYYEEIGLGIDFTARDVQARHKEKGLPWELAKAFDGSAPISTFVPKTKFESVYDINFKLDINGETRQQGNTRDLLFSFESIIAFVSKYITLKKGDLIFTGTPPGVSKVKIGDRLEGYLEDEKMLDFYVK

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541302 Pedobacter sp. CF074 Isolate Unclassified
4 2738543023 Pedobacter sp. OK628 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2739367656 Pedobacter sp. CF523 Isolate Unclassified
7 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
8 2818991437 Pedobacter terrae 518 Isolate Unclassified
9 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
10 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
11 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
12 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
13 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
14 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
15 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
16 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
17 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
18 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
19 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
20 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
21 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
22 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
23 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
24 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
25 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
26 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
29 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
30 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
31 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
32 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
33 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
34 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
35 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
36 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
37 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
38 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
39 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
40 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
41 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
42 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
43 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
44 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
53 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
54 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
75 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
80 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
81 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
111 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
112 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
124 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
133 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
134 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
135 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
148 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
149 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
152 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
153 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
157 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
158 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
162 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
163 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
164 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
165 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
166 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
167 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
168 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.84
Metatranscriptomes 0
Isolates 8.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.41
Nodule 0
Rhizoplane 0.35
Rhizosphere 75.89
Stem 0
Stem Tuber 0
Unclassified 11.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10035311 3300001979 Bacteria 1565
2 JGI24739J22299_10014302 3300001989 Bacteria 2888
3 JGI24737J22298_10000071 3300001990 Bacteria 29829
4 JGI24735J21928_10000013 3300002067 Bacteria 208663
5 JGI25162J39368_1000107 3300002737 Bacteria 90782
6 JGI25164J39214_1001377 3300002772 Bacteria 5829
7 JGI25150J39212_1000014 3300002774 Bacteria 170955
8 JGI25151J46595_10000042 3300003187 Bacteria 170955
9 JGI25165J46597_1000157 3300003214 Bacteria 108987
10 JGI25153J46596_10000009 3300003215 Bacteria 340925
11 rootH1_10132908 3300003316 Bacteria 3543
12 rootH2_10025125 3300003320 Bacteria 4206
13 rootH2_10046177 3300003320 Bacteria 4342
14 rootH2_10071606 3300003320 Bacteria 5560
15 rootL2_10152753 3300003322 Bacteria 2432
16 rootH1_10027348 3300003323 Bacteria 4194
17 rootH1_10076895 3300003323 Bacteria 5837
18 rootH1_10080459 3300003323 Bacteria 1470
19 Ga0055536_1000019 3300003781 Bacteria 203087
20 Ga0055530_10000770 3300003791 Bacteria 26722
21 Ga0065714_10002827 3300005288 Bacteria 10778
22 Ga0065714_10010435 3300005288 Bacteria 2099
23 Ga0065714_10064665 3300005288 Bacteria 25040
24 Ga0065714_10131424 3300005288 Unclassified 1247
25 Ga0065714_10160055 3300005288 Bacteria 1057
26 Ga0065704_10303626 3300005289 Bacteria 881
27 Ga0070683_100003553 3300005329 Bacteria 12684
28 Ga0070660_100055254 3300005339 Bacteria 3068
29 Ga0070674_100089944 3300005356 Bacteria 2213
30 Ga0070659_100000242 3300005366 Bacteria 42847
31 Ga0070659_100018424 3300005366 Bacteria 5268
32 Ga0070663_100018303 3300005455 Bacteria 4590
33 Ga0070681_10003892 3300005458 Bacteria 14063
34 Ga0070679_100003571 3300005530 Bacteria 14242
35 Ga0070679_100033471 3300005530 Bacteria 5089
36 Ga0070684_100050720 3300005535 Bacteria 3605
37 Ga0068853_100015859 3300005539 Bacteria 6189
38 Ga0068853_100423879 3300005539 Bacteria 1248
39 Ga0068855_100443073 3300005563 Bacteria 1418
40 Ga0068855_100524218 3300005563 Bacteria 1285
41 Ga0068854_100162827 3300005578 Bacteria 1729
42 Ga0068856_100000191 3300005614 Bacteria 64613
43 Ga0068856_100003417 3300005614 Bacteria 16061
44 Ga0068856_100086532 3300005614 Bacteria 3114
45 Ga0068852_100291613 3300005616 Bacteria 1576
46 Ga0075366_10002239 3300006195 Bacteria 9880
47 Ga0075366_10003073 3300006195 Bacteria 8714
48 Ga0075366_10010332 3300006195 Bacteria 5240
49 Ga0105240_10000010 3300009093 Bacteria 537830
50 Ga0105240_10026669 3300009093 Bacteria 7581
51 Ga0105240_10158185 3300009093 Bacteria 2693
52 Ga0105243_11371337 3300009148 Bacteria 727
53 Ga0105241_10304787 3300009174 Bacteria 1368
54 Ga0105237_10000844 3300009545 Bacteria 41756
55 Ga0105237_10001048 3300009545 Bacteria 37140
56 Ga0105237_10008085 3300009545 Bacteria 11437
57 Ga0105237_10008956 3300009545 Bacteria 10774
58 Ga0105237_10518318 3300009545 Bacteria 1199
59 Ga0105237_10966065 3300009545 Bacteria 859
60 Ga0105237_11103438 3300009545 Unclassified 800
61 Ga0105238_10044762 3300009551 Bacteria 4473
62 Ga0105238_10423279 3300009551 Bacteria 1326
63 Ga0105238_11165796 3300009551 Bacteria 794
64 Ga0105239_10000001 3300010375 Bacteria 617353
65 Ga0105239_10000007 3300010375 Bacteria 385297
66 Ga0105239_10000212 3300010375 Bacteria 85747
67 Ga0105239_10000352 3300010375 Bacteria 67522
68 Ga0105239_10005942 3300010375 Bacteria 14203
69 Ga0105239_10011856 3300010375 Bacteria 9725
70 Ga0157373_10000031 3300013100 Bacteria 126446
71 Ga0157373_10000881 3300013100 Bacteria 23243
72 Ga0157373_10014273 3300013100 Bacteria 5826
73 Ga0157371_10000689 3300013102 Bacteria 39887
74 Ga0157371_10000851 3300013102 Bacteria 34883
75 Ga0157371_10001485 3300013102 Bacteria 24261
76 Ga0157371_10006347 3300013102 Bacteria 9780
77 Ga0157371_10044143 3300013102 Bacteria 3174
78 Ga0157370_10001617 3300013104 Bacteria 27842
79 Ga0157370_10012980 3300013104 Bacteria 8608
80 Ga0157370_10020229 3300013104 Bacteria 6650
81 Ga0157370_10053495 3300013104 Bacteria 3850
82 Ga0157370_10072997 3300013104 Bacteria 3237
83 Ga0157370_10489567 3300013104 Unclassified 1130
84 Ga0157370_10946128 3300013104 Unclassified 781
85 Ga0157369_10000031 3300013105 Bacteria 203214
86 Ga0157369_10007184 3300013105 Bacteria 12833
87 Ga0157369_10072708 3300013105 Bacteria 3691
88 Ga0157374_10157253 3300013296 Bacteria 2213
89 Ga0157374_10630250 3300013296 Bacteria 1083
90 Ga0157374_10658985 3300013296 Bacteria 1059
91 Ga0157378_10020762 3300013297 Bacteria 5776
92 Ga0157378_10232201 3300013297 Bacteria 1758
93 Ga0163162_10000093 3300013306 Bacteria 82738
94 Ga0163162_10024006 3300013306 Bacteria 6018
95 Ga0163162_10884143 3300013306 Bacteria 1007
96 Ga0157372_10000073 3300013307 Bacteria 107356
97 Ga0157372_10000173 3300013307 Bacteria 71416
98 Ga0157372_10002719 3300013307 Bacteria 19140
99 Ga0157372_10009261 3300013307 Bacteria 10472
100 Ga0157372_10010028 3300013307 Bacteria 10074
101 Ga0157372_10736194 3300013307 Bacteria 1147
102 Ga0157375_10039278 3300013308 Bacteria 4554
103 Ga0182008_10000157 3300014497 Bacteria 53598
104 Ga0157376_11314029 3300014969 Bacteria 753
105 Ga0182006_1000173 3300015261 Bacteria 67776
106 Ga0182006_1001239 3300015261 Bacteria 15824
107 Ga0182007_10000002 3300015262 Bacteria 564661
108 Ga0183373_1004 3300015682 Bacteria 537398
109 Ga0163161_10000944 3300017792 Bacteria 22386
110 Ga0163161_10000964 3300017792 Bacteria 22069
111 Ga0163161_10010303 3300017792 Bacteria 6474
112 Ga0163161_10036914 3300017792 Bacteria 3501
113 Ga0207427_100025 3300025231 Bacteria 433726
114 Ga0207427_107490 3300025231 Bacteria 1276
115 Ga0209437_100010 3300025233 Bacteria 838447
116 Ga0209437_100148 3300025233 Bacteria 158795
117 Ga0207425_1000023 3300025245 Bacteria 341339
118 Ga0209026_1000219 3300025250 Bacteria 78822
119 Ga0209026_1000430 3300025250 Bacteria 35017
120 Ga0209026_1004222 3300025250 Bacteria 4372
121 Ga0209129_1000032 3300025258 Bacteria 341150
122 Ga0209233_1000017 3300025261 Bacteria 898076
123 Ga0209233_1001980 3300025261 Bacteria 7776
124 Ga0209676_1000009 3300025292 Bacteria 981719
125 Ga0209025_1000047 3300025294 Bacteria 341150
126 Ga0209758_1000145 3300025297 Bacteria 170553
127 Ga0209050_1000094 3300025298 Bacteria 242893
128 Ga0207647_10000366 3300025904 Bacteria 36781
129 Ga0207647_10005778 3300025904 Bacteria 9026
130 Ga0207705_10000107 3300025909 Bacteria 94984
131 Ga0207705_10224032 3300025909 Bacteria 1429
132 Ga0207654_10024621 3300025911 Bacteria 3238
133 Ga0207654_10535596 3300025911 Bacteria 830
134 Ga0207707_10003005 3300025912 Bacteria 14994
135 Ga0207695_10000019 3300025913 Bacteria 732137
136 Ga0207695_10420300 3300025913 Bacteria 1221
137 Ga0207671_10002702 3300025914 Bacteria 18606
138 Ga0207671_10003730 3300025914 Bacteria 15012
139 Ga0207671_10014749 3300025914 Bacteria 6161
140 Ga0207671_10033798 3300025914 Bacteria 3804
141 Ga0207671_10870274 3300025914 Bacteria 713
142 Ga0207660_10114840 3300025917 Bacteria 2031
143 Ga0207652_10051921 3300025921 Bacteria 3517
144 Ga0207652_10136312 3300025921 Bacteria 2192
145 Ga0207694_10149256 3300025924 Bacteria 1883
146 Ga0207690_10000272 3300025932 Bacteria 36902
147 Ga0207690_10009396 3300025932 Bacteria 5807
148 Ga0207669_10043934 3300025937 Bacteria 2621
149 Ga0207661_10004099 3300025944 Bacteria 10186
150 Ga0207667_10000015 3300025949 Bacteria 417534
151 Ga0207667_10002856 3300025949 Bacteria 21432
152 Ga0207667_10464745 3300025949 Bacteria 1285
153 Ga0207667_10663480 3300025949 Bacteria 1048
154 Ga0207651_10444947 3300025960 Bacteria 1111
155 Ga0207640_10138925 3300025981 Bacteria 1768
156 Ga0207639_10552121 3300026041 Bacteria 1058
157 Ga0207639_10671310 3300026041 Bacteria 960
158 Ga0207678_10489470 3300026067 Bacteria 1071
159 Ga0207702_10003768 3300026078 Bacteria 13697
160 Ga0207702_10064488 3300026078 Bacteria 3135
161 Ga0207674_10201678 3300026116 Bacteria 1939
162 Ga0207698_10241109 3300026142 Bacteria 1648
163 Ga0307517_10001373 3300028786 Bacteria 40930
164 Ga0307515_10001837 3300028794 Bacteria 47323
165 Ga0307515_10011966 3300028794 Bacteria 16385
166 Ga0307515_10100899 3300028794 Bacteria 3490
167 Ga0307515_10165800 3300028794 Bacteria 2228
168 Ga0265338_10084286 3300028800 Bacteria 2654
169 Ga0314311_1147295 3300030733 Bacteria 815
170 Ga0316183_1096868 3300030742 Bacteria 33618
171 Ga0316181_1043870 3300030744 Bacteria 9240
172 Ga0307513_10321840 3300031456 Bacteria 1304
173 Ga0307509_10110423 3300031507 Bacteria 2755
174 Ga0307408_100006564 3300031548 Bacteria 7712
175 Ga0307405_10000015 3300031731 Bacteria 206299
176 Ga0307405_10215011 3300031731 Bacteria 1406
177 Ga0307407_10000027 3300031903 Bacteria 107307
178 Ga0307412_10062214 3300031911 Unclassified 2512
179 Ga0307412_10087541 3300031911 Bacteria 2170
180 Ga0307409_100064413 3300031995 Bacteria 2879
181 Ga0307416_100000002 3300032002 Bacteria 509907
182 Ga0307414_10063964 3300032004 Bacteria 2617
183 Ga0307414_10181028 3300032004 Unclassified 1695
184 Ga0307411_10164308 3300032005 Bacteria 1667
185 Ga0307507_10000032 3300033179 Bacteria 194155
186 Ga0307510_10010205 3300033180 Bacteria 11166
187 Ga0395899_0000002 3300037312 Bacteria 1324310
188 Ga0395899_0004043 3300037312 Bacteria 11569
189 Ga0395899_0055405 3300037312 Bacteria 2933
190 Ga0395900_0000284 3300037418 Bacteria 75852
191 Ga0395900_0039515 3300037418 Bacteria 4862
192 Ga0395900_0246668 3300037418 Bacteria 1789
193 Ga0395905_0002359 3300037471 Bacteria 21041
194 Ga0466969_0028027 3300044656 Bacteria 2881
195 Ga0466966_0009523 3300044684 Bacteria 6432
196 Ga0466961_0055984 3300044693 Bacteria 2513
197 Ga0495650_0000162 3300046471 Bacteria 148927
198 Ga0495650_0049898 3300046471 Bacteria 1734
199 Ga0495605_0111221 3300046474 Bacteria 1250
200 Ga0495585_0000153 3300046492 Bacteria 74267
201 Ga0495585_0000240 3300046492 Bacteria 56802
202 Ga0495596_0036530 3300046500 Bacteria 1946
203 Ga0495583_0015174 3300046506 Bacteria 4204
204 Ga0495606_0000033 3300046507 Bacteria 247739
205 Ga0495606_0060719 3300046507 Bacteria 2420
206 Ga0495610_0000768 3300046512 Bacteria 30249
207 Ga0495610_0009182 3300046512 Bacteria 6280
208 Ga0495610_0013903 3300046512 Bacteria 4755
209 Ga0495610_0147204 3300046512 Bacteria 1008
210 Ga0495616_0013970 3300046513 Bacteria 4511
211 Ga0495616_0021699 3300046513 Bacteria 3473
212 Ga0495631_0136430 3300046518 Bacteria 1054
213 Ga0495631_0234875 3300046518 Bacteria 782
214 Ga0495631_0259233 3300046518 Bacteria 741
215 Ga0495648_0088542 3300046524 Bacteria 1740
216 Ga0495652_0056217 3300046529 Bacteria 3343
217 Ga0495652_0555567 3300046529 Bacteria 789
218 Ga0495609_0006455 3300046538 Bacteria 5981
219 Ga0495609_0123517 3300046538 Bacteria 1112
220 Ga0495622_0131655 3300046557 Bacteria 1139
221 Ga0495633_0000067 3300046558 Bacteria 139122
222 Ga0495633_0011234 3300046558 Bacteria 4840
223 Ga0495668_0000009 3300046616 Bacteria 492623
224 Ga0495668_0032279 3300046616 Bacteria 2948
225 Ga0495668_0298602 3300046616 Bacteria 883
226 Ga0495625_0000131 3300046660 Bacteria 117738
227 Ga0495625_0000951 3300046660 Bacteria 38714
228 Ga0495625_0014454 3300046660 Bacteria 6299
229 Ga0495625_0016574 3300046660 Bacteria 5794
230 Ga0495635_0575659 3300046663 Bacteria 737
231 Ga0495661_0000134 3300046665 Bacteria 87487
232 Ga0495661_0003857 3300046665 Bacteria 10954
233 Ga0495661_0143363 3300046665 Bacteria 1297
234 Ga0495658_0157793 3300046683 Bacteria 1397
235 Ga0495649_0000009 3300046694 Bacteria 451725
236 Ga0495660_0046656 3300046810 Bacteria 2375
237 Ga0495683_0253051 3300047323 Bacteria 772
238 Ga0495687_041126 3300047443 Bacteria 2030
239 Ga0495687_046928 3300047443 Bacteria 1861
240 Ga0495681_0026235 3300047470 Bacteria 3038
241 Ga0495686_0000843 3300047472 Bacteria 39372
242 Ga0495686_0002207 3300047472 Bacteria 18912
243 Ga0495686_0039567 3300047472 Bacteria 3011
244 Ga0495686_0311815 3300047472 Unclassified 865
245 Ga0495614_0267177 3300048089 Bacteria 785
246 Ga0501223_000668 3300049663 Bacteria 8215
247 Ga0501241_007079 3300049758 Bacteria 2060
248 nmdc:mga0k408_320_c1 3300050493 Bacteria 26097
249 nmdc:mga0k408_3699_c1 3300050493 Bacteria 8102
250 nmdc:mga0k408_8085_c1 3300050493 Bacteria 5639
251 Ga0500635_0000431 3300053080 Bacteria 12176
252 Ga0500647_0113897 3300053091 Bacteria 1284
253 Ga0500608_004337 3300053122 Bacteria 5474
254 Ga0500614_109537 3300053123 Bacteria 804
255 Ga0500618_000029 3300053125 Bacteria 131691
256 Ga0500642_0236130 3300053130 Bacteria 843
257 Ga0500652_044089 3300053131 Bacteria 1805
258 Ga0500561_0155064 3300053137 Bacteria 714
259 Ga0500624_000118 3300053157 Bacteria 35980

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046518 Ga0495631_0136430 Ga0495631_0136430_512_1039 175
2 3300003320 rootH2_10046177 rootH2_100461772 192
3 iso_pu_bacteria 2585427687 2586206279 199
4 iso_pu_bacteria 2599185184 2599480421 199
5 iso_pu_bacteria 2738541302 2738856174 199
6 iso_pu_bacteria 2738543023 2739303261 199
7 iso_pu_bacteria 2739367651 2739588270 199
8 iso_pu_bacteria 2739367656 2739613956 199
9 iso_pu_bacteria 2775506987 2776615045 199
10 iso_pu_bacteria 2818991437 2819546243 199
11 iso_pu_bacteria 2842722452 2842723925 199
12 iso_pu_bacteria 2842909656 2842912343 199
13 iso_pu_bacteria 2849281842 2849282776 199
14 iso_pu_bacteria 2852623160 2852626774 199
15 iso_pu_bacteria 2852627209 2852629374 199
16 iso_pu_bacteria 2857627736 2857629313 199
17 iso_pu_bacteria 2884933994 2884933997 199
18 iso_pu_bacteria 2904445276 2904446516 199
19 iso_pu_bacteria 2919437846 2919438277 199
20 iso_pu_bacteria 2928078545 2928083338 199
21 iso_pu_bacteria 2928147474 2928151400 199
22 iso_pu_bacteria 2932082852 2932087319 199
23 iso_pu_bacteria 2945997725 2945999329 199
24 iso_pu_bacteria 2954016120 2954021726 199
25 iso_pu_bacteria 2977232053 2977236453 199
26 3300001979 JGI24740J21852_10035311 JGI24740J21852_100353112 203
27 3300001989 JGI24739J22299_10014302 JGI24739J22299_100143022 203
28 3300001990 JGI24737J22298_10000071 JGI24737J22298_1000007114 203
29 3300002067 JGI24735J21928_10000013 JGI24735J21928_10000013162 203
30 3300002737 JGI25162J39368_1000107 JGI25162J39368_100010743 203
31 3300002772 JGI25164J39214_1001377 JGI25164J39214_10013776 203
32 3300002774 JGI25150J39212_1000014 JGI25150J39212_100001479 203
33 3300003187 JGI25151J46595_10000042 JGI25151J46595_1000004279 203
34 3300003214 JGI25165J46597_1000157 JGI25165J46597_100015735 203
35 3300003215 JGI25153J46596_10000009 JGI25153J46596_1000000979 203
36 3300003316 rootH1_10132908 rootH1_101329084 203
37 3300003320 rootH2_10025125 rootH2_100251253 203
38 3300003320 rootH2_10071606 rootH2_100716063 203
39 3300003322 rootL2_10152753 rootL2_101527532 203
40 3300003323 rootH1_10027348 rootH1_100273484 203
41 3300003323 rootH1_10076895 rootH1_100768957 203
42 3300003323 rootH1_10080459 rootH1_100804592 203
43 3300003781 Ga0055536_1000019 Ga0055536_1000019109 203
44 3300003791 Ga0055530_10000770 Ga0055530_1000077015 203
45 3300005288 Ga0065714_10002827 Ga0065714_100028278 203
46 3300005288 Ga0065714_10010435 Ga0065714_100104351 203
47 3300005288 Ga0065714_10064665 Ga0065714_100646652 203
48 3300005288 Ga0065714_10131424 Ga0065714_101314242 203
49 3300005288 Ga0065714_10160055 Ga0065714_101600552 203
50 3300005289 Ga0065704_10303626 Ga0065704_103036262 203
51 3300005329 Ga0070683_100003553 Ga0070683_1000035536 203
52 3300005339 Ga0070660_100055254 Ga0070660_1000552542 203
53 3300005356 Ga0070674_100089944 Ga0070674_1000899442 203
54 3300005366 Ga0070659_100000242 Ga0070659_10000024221 203
55 3300005366 Ga0070659_100018424 Ga0070659_1000184245 203
56 3300005455 Ga0070663_100018303 Ga0070663_1000183034 203
57 3300005458 Ga0070681_10003892 Ga0070681_100038926 203
58 3300005530 Ga0070679_100003571 Ga0070679_1000035712 203
59 3300005530 Ga0070679_100033471 Ga0070679_1000334713 203
60 3300005535 Ga0070684_100050720 Ga0070684_1000507204 203
61 3300005539 Ga0068853_100015859 Ga0068853_1000158592 203
62 3300005539 Ga0068853_100423879 Ga0068853_1004238791 203
63 3300005563 Ga0068855_100443073 Ga0068855_1004430734 203
64 3300005563 Ga0068855_100524218 Ga0068855_1005242182 203
65 3300005578 Ga0068854_100162827 Ga0068854_1001628273 203
66 3300005614 Ga0068856_100000191 Ga0068856_10000019110 203
67 3300005614 Ga0068856_100003417 Ga0068856_10000341712 203
68 3300005614 Ga0068856_100086532 Ga0068856_1000865321 203
69 3300005616 Ga0068852_100291613 Ga0068852_1002916131 203
70 3300006195 Ga0075366_10002239 Ga0075366_100022395 203
71 3300006195 Ga0075366_10003073 Ga0075366_100030736 203
72 3300006195 Ga0075366_10010332 Ga0075366_100103322 203
73 3300009093 Ga0105240_10000010 Ga0105240_1000001061 203
74 3300009093 Ga0105240_10026669 Ga0105240_100266692 203
75 3300009093 Ga0105240_10158185 Ga0105240_101581851 203
76 3300009148 Ga0105243_11371337 Ga0105243_113713371 203
77 3300009174 Ga0105241_10304787 Ga0105241_103047871 203
78 3300009545 Ga0105237_10000844 Ga0105237_1000084437 203
79 3300009545 Ga0105237_10001048 Ga0105237_1000104837 203
80 3300009545 Ga0105237_10008085 Ga0105237_100080857 203
81 3300009545 Ga0105237_10008956 Ga0105237_100089569 203
82 3300009545 Ga0105237_10518318 Ga0105237_105183182 203
83 3300009545 Ga0105237_10966065 Ga0105237_109660651 203
84 3300009545 Ga0105237_11103438 Ga0105237_111034382 203
85 3300009551 Ga0105238_10044762 Ga0105238_100447623 203
86 3300009551 Ga0105238_10423279 Ga0105238_104232792 203
87 3300009551 Ga0105238_11165796 Ga0105238_111657961 203
88 3300010375 Ga0105239_10000001 Ga0105239_10000001302 203
89 3300010375 Ga0105239_10000007 Ga0105239_10000007169 203
90 3300010375 Ga0105239_10000212 Ga0105239_1000021244 203
91 3300010375 Ga0105239_10000352 Ga0105239_1000035241 203
92 3300010375 Ga0105239_10005942 Ga0105239_100059426 203
93 3300010375 Ga0105239_10011856 Ga0105239_100118568 203
94 3300013100 Ga0157373_10000031 Ga0157373_1000003152 203
95 3300013100 Ga0157373_10000881 Ga0157373_1000088117 203
96 3300013100 Ga0157373_10014273 Ga0157373_100142736 203
97 3300013102 Ga0157371_10000689 Ga0157371_1000068912 203
98 3300013102 Ga0157371_10000851 Ga0157371_1000085115 203
99 3300013102 Ga0157371_10001485 Ga0157371_1000148519 203
100 3300013102 Ga0157371_10006347 Ga0157371_100063478 203
101 3300013102 Ga0157371_10044143 Ga0157371_100441432 203
102 3300013104 Ga0157370_10001617 Ga0157370_1000161717 203
103 3300013104 Ga0157370_10012980 Ga0157370_100129805 203
104 3300013104 Ga0157370_10020229 Ga0157370_100202292 203
105 3300013104 Ga0157370_10053495 Ga0157370_100534952 203
106 3300013104 Ga0157370_10072997 Ga0157370_100729973 203
107 3300013104 Ga0157370_10489567 Ga0157370_104895672 203
108 3300013104 Ga0157370_10946128 Ga0157370_109461282 203
109 3300013105 Ga0157369_10000031 Ga0157369_1000003147 203
110 3300013105 Ga0157369_10007184 Ga0157369_100071847 203
111 3300013105 Ga0157369_10072708 Ga0157369_100727083 203
112 3300013296 Ga0157374_10157253 Ga0157374_101572531 203
113 3300013296 Ga0157374_10630250 Ga0157374_106302502 203
114 3300013296 Ga0157374_10658985 Ga0157374_106589852 203
115 3300013297 Ga0157378_10020762 Ga0157378_100207627 203
116 3300013297 Ga0157378_10232201 Ga0157378_102322012 203
117 3300013306 Ga0163162_10000093 Ga0163162_1000009330 203
118 3300013306 Ga0163162_10024006 Ga0163162_100240063 203
119 3300013306 Ga0163162_10884143 Ga0163162_108841432 203
120 3300013307 Ga0157372_10000073 Ga0157372_100000738 203
121 3300013307 Ga0157372_10000173 Ga0157372_1000017342 203
122 3300013307 Ga0157372_10002719 Ga0157372_1000271916 203
123 3300013307 Ga0157372_10009261 Ga0157372_100092615 203
124 3300013307 Ga0157372_10010028 Ga0157372_100100286 203
125 3300013307 Ga0157372_10736194 Ga0157372_107361941 203
126 3300013308 Ga0157375_10039278 Ga0157375_100392783 203
127 3300014497 Ga0182008_10000157 Ga0182008_1000015732 203
128 3300014969 Ga0157376_11314029 Ga0157376_113140291 203
129 3300015261 Ga0182006_1000173 Ga0182006_100017359 203
130 3300015261 Ga0182006_1001239 Ga0182006_10012393 203
131 3300015262 Ga0182007_10000002 Ga0182007_1000000278 203
132 3300015682 Ga0183373_1004 Ga0183373_1004397 203
133 3300017792 Ga0163161_10000944 Ga0163161_100009442 203
134 3300017792 Ga0163161_10000964 Ga0163161_1000096421 203
135 3300017792 Ga0163161_10010303 Ga0163161_100103032 203
136 3300017792 Ga0163161_10036914 Ga0163161_100369142 203
137 3300025231 Ga0207427_100025 Ga0207427_100025107 203
138 3300025231 Ga0207427_107490 Ga0207427_1074902 203
139 3300025233 Ga0209437_100010 Ga0209437_100010369 203
140 3300025233 Ga0209437_100148 Ga0209437_100148100 203
141 3300025245 Ga0207425_1000023 Ga0207425_100002379 203
142 3300025250 Ga0209026_1000219 Ga0209026_100021935 203
143 3300025250 Ga0209026_1000430 Ga0209026_10004306 203
144 3300025250 Ga0209026_1004222 Ga0209026_10042221 203
145 3300025258 Ga0209129_1000032 Ga0209129_1000032194 203
146 3300025261 Ga0209233_1000017 Ga0209233_1000017382 203
147 3300025261 Ga0209233_1001980 Ga0209233_10019806 203
148 3300025292 Ga0209676_1000009 Ga0209676_100000974 203
149 3300025294 Ga0209025_1000047 Ga0209025_1000047194 203
150 3300025297 Ga0209758_1000145 Ga0209758_100014579 203
151 3300025298 Ga0209050_1000094 Ga0209050_100009474 203
152 3300025904 Ga0207647_10000366 Ga0207647_1000036613 203
153 3300025904 Ga0207647_10005778 Ga0207647_100057782 203
154 3300025909 Ga0207705_10000107 Ga0207705_1000010719 203
155 3300025909 Ga0207705_10224032 Ga0207705_102240322 203
156 3300025911 Ga0207654_10024621 Ga0207654_100246212 203
157 3300025911 Ga0207654_10535596 Ga0207654_105355961 203
158 3300025912 Ga0207707_10003005 Ga0207707_100030058 203
159 3300025913 Ga0207695_10000019 Ga0207695_10000019390 203
160 3300025913 Ga0207695_10420300 Ga0207695_104203002 203
161 3300025914 Ga0207671_10002702 Ga0207671_1000270214 203
162 3300025914 Ga0207671_10003730 Ga0207671_100037309 203
163 3300025914 Ga0207671_10014749 Ga0207671_100147497 203
164 3300025914 Ga0207671_10033798 Ga0207671_100337986 203
165 3300025914 Ga0207671_10870274 Ga0207671_108702741 203
166 3300025917 Ga0207660_10114840 Ga0207660_101148402 203
167 3300025921 Ga0207652_10051921 Ga0207652_100519212 203
168 3300025921 Ga0207652_10136312 Ga0207652_101363122 203
169 3300025924 Ga0207694_10149256 Ga0207694_101492562 203
170 3300025932 Ga0207690_10000272 Ga0207690_100002728 203
171 3300025932 Ga0207690_10009396 Ga0207690_100093966 203
172 3300025937 Ga0207669_10043934 Ga0207669_100439344 203
173 3300025944 Ga0207661_10004099 Ga0207661_100040998 203
174 3300025949 Ga0207667_10000015 Ga0207667_10000015304 203
175 3300025949 Ga0207667_10002856 Ga0207667_1000285616 203
176 3300025949 Ga0207667_10464745 Ga0207667_104647452 203
177 3300025949 Ga0207667_10663480 Ga0207667_106634802 203
178 3300025960 Ga0207651_10444947 Ga0207651_104449472 203
179 3300025981 Ga0207640_10138925 Ga0207640_101389252 203
180 3300026041 Ga0207639_10552121 Ga0207639_105521212 203
181 3300026041 Ga0207639_10671310 Ga0207639_106713101 203
182 3300026067 Ga0207678_10489470 Ga0207678_104894701 203
183 3300026078 Ga0207702_10003768 Ga0207702_100037686 203
184 3300026078 Ga0207702_10064488 Ga0207702_100644881 203
185 3300026116 Ga0207674_10201678 Ga0207674_102016782 203
186 3300026142 Ga0207698_10241109 Ga0207698_102411092 203
187 3300028786 Ga0307517_10001373 Ga0307517_1000137327 203
188 3300028794 Ga0307515_10001837 Ga0307515_100018374 203
189 3300028794 Ga0307515_10011966 Ga0307515_100119662 203
190 3300028794 Ga0307515_10100899 Ga0307515_101008992 203
191 3300028794 Ga0307515_10165800 Ga0307515_101658002 203
192 3300028800 Ga0265338_10084286 Ga0265338_100842864 203
193 3300030733 Ga0314311_1147295 Ga0314311_11472951 203
194 3300030742 Ga0316183_1096868 Ga0316183_109686824 203
195 3300030744 Ga0316181_1043870 Ga0316181_10438702 203
196 3300031456 Ga0307513_10321840 Ga0307513_103218402 203
197 3300031507 Ga0307509_10110423 Ga0307509_101104234 203
198 3300031548 Ga0307408_100006564 Ga0307408_1000065642 203
199 3300031731 Ga0307405_10000015 Ga0307405_1000001591 203
200 3300031731 Ga0307405_10215011 Ga0307405_102150112 203
201 3300031903 Ga0307407_10000027 Ga0307407_1000002739 203
202 3300031911 Ga0307412_10062214 Ga0307412_100622143 203
203 3300031911 Ga0307412_10087541 Ga0307412_100875413 203
204 3300031995 Ga0307409_100064413 Ga0307409_1000644132 203
205 3300032002 Ga0307416_100000002 Ga0307416_10000000265 203
206 3300032004 Ga0307414_10063964 Ga0307414_100639643 203
207 3300032004 Ga0307414_10181028 Ga0307414_101810282 203
208 3300032005 Ga0307411_10164308 Ga0307411_101643082 203
209 3300033179 Ga0307507_10000032 Ga0307507_10000032110 203
210 3300033180 Ga0307510_10010205 Ga0307510_1001020510 203
211 3300037312 Ga0395899_0000002 Ga0395899_0000002_532990_533601 203
212 3300037312 Ga0395899_0004043 Ga0395899_0004043_8337_8948 203
213 3300037312 Ga0395899_0055405 Ga0395899_0055405_978_1589 203
214 3300037418 Ga0395900_0000284 Ga0395900_0000284_5648_6259 203
215 3300037418 Ga0395900_0039515 Ga0395900_0039515_482_1093 203
216 3300037418 Ga0395900_0246668 Ga0395900_0246668_1117_1728 203
217 3300037471 Ga0395905_0002359 Ga0395905_0002359_11477_12088 203
218 3300044656 Ga0466969_0028027 Ga0466969_0028027_914_1525 203
219 3300044684 Ga0466966_0009523 Ga0466966_0009523_2938_3549 203
220 3300044693 Ga0466961_0055984 Ga0466961_0055984_451_1062 203
221 3300046471 Ga0495650_0000162 Ga0495650_0000162_93233_93844 203
222 3300046471 Ga0495650_0049898 Ga0495650_0049898_173_784 203
223 3300046474 Ga0495605_0111221 Ga0495605_0111221_470_1081 203
224 3300046492 Ga0495585_0000153 Ga0495585_0000153_70304_70915 203
225 3300046492 Ga0495585_0000240 Ga0495585_0000240_8648_9259 203
226 3300046500 Ga0495596_0036530 Ga0495596_0036530_442_1053 203
227 3300046506 Ga0495583_0015174 Ga0495583_0015174_362_973 203
228 3300046507 Ga0495606_0000033 Ga0495606_0000033_209091_209702 203
229 3300046507 Ga0495606_0060719 Ga0495606_0060719_354_965 203
230 3300046512 Ga0495610_0000768 Ga0495610_0000768_27198_27809 203
231 3300046512 Ga0495610_0009182 Ga0495610_0009182_3203_3814 203
232 3300046512 Ga0495610_0013903 Ga0495610_0013903_918_1529 203
233 3300046512 Ga0495610_0147204 Ga0495610_0147204_176_787 203
234 3300046513 Ga0495616_0013970 Ga0495616_0013970_191_802 203
235 3300046513 Ga0495616_0021699 Ga0495616_0021699_494_1105 203
236 3300046518 Ga0495631_0234875 Ga0495631_0234875_101_712 203
237 3300046518 Ga0495631_0259233 Ga0495631_0259233_96_707 203
238 3300046524 Ga0495648_0088542 Ga0495648_0088542_37_648 203
239 3300046529 Ga0495652_0056217 Ga0495652_0056217_353_964 203
240 3300046529 Ga0495652_0555567 Ga0495652_0555567_120_731 203
241 3300046538 Ga0495609_0006455 Ga0495609_0006455_3764_4375 203
242 3300046538 Ga0495609_0123517 Ga0495609_0123517_403_1014 203
243 3300046557 Ga0495622_0131655 Ga0495622_0131655_449_1060 203
244 3300046558 Ga0495633_0000067 Ga0495633_0000067_25407_26018 203
245 3300046558 Ga0495633_0011234 Ga0495633_0011234_2083_2694 203
246 3300046616 Ga0495668_0000009 Ga0495668_0000009_205626_206237 203
247 3300046616 Ga0495668_0032279 Ga0495668_0032279_1069_1680 203
248 3300046616 Ga0495668_0298602 Ga0495668_0298602_195_806 203
249 3300046660 Ga0495625_0000131 Ga0495625_0000131_86775_87386 203
250 3300046660 Ga0495625_0000951 Ga0495625_0000951_5034_5645 203
251 3300046660 Ga0495625_0014454 Ga0495625_0014454_2394_3005 203
252 3300046660 Ga0495625_0016574 Ga0495625_0016574_1040_1651 203
253 3300046663 Ga0495635_0575659 Ga0495635_0575659_92_703 203
254 3300046665 Ga0495661_0000134 Ga0495661_0000134_57222_57833 203
255 3300046665 Ga0495661_0003857 Ga0495661_0003857_2791_3402 203
256 3300046665 Ga0495661_0143363 Ga0495661_0143363_401_1012 203
257 3300046683 Ga0495658_0157793 Ga0495658_0157793_209_820 203
258 3300046694 Ga0495649_0000009 Ga0495649_0000009_86765_87376 203
259 3300046810 Ga0495660_0046656 Ga0495660_0046656_446_1057 203
260 3300047323 Ga0495683_0253051 Ga0495683_0253051_132_743 203
261 3300047443 Ga0495687_041126 Ga0495687_041126_701_1312 203
262 3300047443 Ga0495687_046928 Ga0495687_046928_804_1415 203
263 3300047470 Ga0495681_0026235 Ga0495681_0026235_874_1485 203
264 3300047472 Ga0495686_0000843 Ga0495686_0000843_3675_4286 203
265 3300047472 Ga0495686_0002207 Ga0495686_0002207_16491_17102 203
266 3300047472 Ga0495686_0039567 Ga0495686_0039567_1877_2488 203
267 3300047472 Ga0495686_0311815 Ga0495686_0311815_64_675 203
268 3300048089 Ga0495614_0267177 Ga0495614_0267177_101_712 203
269 3300049663 Ga0501223_000668 Ga0501223_000668_3594_4205 203
270 3300049758 Ga0501241_007079 Ga0501241_007079_606_1217 203
271 3300050493 nmdc:mga0k408_320_c1 nmdc:mga0k408_320_c1_3531_4142 203
272 3300050493 nmdc:mga0k408_3699_c1 nmdc:mga0k408_3699_c1_6513_7124 203
273 3300050493 nmdc:mga0k408_8085_c1 nmdc:mga0k408_8085_c1_1116_1727 203
274 3300053080 Ga0500635_0000431 Ga0500635_0000431_1270_1881 203
275 3300053091 Ga0500647_0113897 Ga0500647_0113897_172_783 203
276 3300053122 Ga0500608_004337 Ga0500608_004337_1856_2467 203
277 3300053123 Ga0500614_109537 Ga0500614_109537_73_684 203
278 3300053125 Ga0500618_000029 Ga0500618_000029_12328_12939 203
279 3300053130 Ga0500642_0236130 Ga0500642_0236130_170_781 203
280 3300053131 Ga0500652_044089 Ga0500652_044089_583_1194 203
281 3300053137 Ga0500561_0155064 Ga0500561_0155064_32_643 203
282 3300053157 Ga0500624_000118 Ga0500624_000118_31445_32056 203

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

2

199

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1saw-assembly1.cif.gz_A x-ray structure of homo sapiens protein flj36880 0.955 2 203
6sbj-assembly2.cif.gz_C x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.9523 2 203
6sbj-assembly1.cif.gz_B x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.9521 2 203
6fog-assembly4.cif.gz_D x-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate at 1.94a resolution. 0.9518 2 203
6sbi-assembly2.cif.gz_C x-ray structure of murine fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate 0.9484 2 203
ID Description Score Start End Superfamily
af_P34673_5_211_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9513 2 200 3.90.850.10
af_Q9VDE2_1_220_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.948 2 203 3.90.850.10
af_Q9VDE2_1_220_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.939 2 203 3.90.850.10
af_A0A1D8PI10_75_291_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9358 2 203 3.90.850.10
af_P76004_1_219_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.934 2 203 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A2G6H178-F1-model_v4 Fumarylacetoacetase-like C-terminal domain-containing protein 0.9892 115 203 GO:0018773
GO:0046872
AF-A0A520BEY1-F1-model_v4 FAA hydrolase family protein 0.9831 23 203 GO:0018773
GO:0046872
AF-A0A6I0E313-F1-model_v4 Fumarylacetoacetate hydrolase family protein 0.9822 38 203 GO:0018773
GO:0046872
AF-A0A645DMS7-F1-model_v4 Fumarylacetoacetase-like C-terminal domain-containing protein 0.9818 56 203 GO:0018773
GO:0046872
AF-A0A520BEY1-F1-model_v4 FAA hydrolase family protein 0.9778 23 203 GO:0018773
GO:0046872

Feature Viewer

pLDDT pTM Quality
93.14 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map