F384598

General Info

Members Datasets Scaffolds Average Seq Length
281 172 562 128

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_188479_c1|nmdc:mga06r32_188479_c1_635_1087
Length 150
Sequence VLVSSLHGLWAEEIQPKEIRMEFPEDLRYTKEHEWARDEGSGRIRVGITDFAQDALGDVVYVDVPEAGTAVTANQPFSEVESTKSVSDVYAPVSGTVAERNALLGERPEVVNEQPYGDGWLVLVEVADPAALEGLMDAAAYRAFVEQQTD

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300001978 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
88 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
89 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
90 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
102 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
103 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
106 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
107 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
108 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
109 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
110 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
111 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
112 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
122 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
127 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
128 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
129 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
136 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 4.63
Rhizosphere 93.95
Stem 0
Stem Tuber 0
Unclassified 1.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_188479_c1 3300050510 Bacteria 2050
2 JGI24752J21851_1004582 3300001976 Bacteria 1811
3 JGI24747J21853_1022703 3300001978 Bacteria 690
4 JGI24751J29686_10001376 3300002459 Bacteria 5112
5 JGI24751J29686_10011260 3300002459 Bacteria 1845
6 JGI25405J52794_10077394 3300003911 Bacteria 730
7 Ga0070683_100009542 3300005329 Bacteria 8307
8 Ga0068869_101354338 3300005334 Bacteria 629
9 Ga0068868_101163442 3300005338 Bacteria 712
10 Ga0070661_100005560 3300005344 Bacteria 8686
11 Ga0070692_10371093 3300005345 Bacteria 895
12 Ga0070668_100180129 3300005347 Bacteria 1726
13 Ga0070675_100118942 3300005354 Bacteria 2243
14 Ga0070703_10007995 3300005406 Bacteria 2973
15 Ga0070700_100170740 3300005441 Bacteria 1506
16 Ga0070700_100324733 3300005441 Bacteria 1132
17 Ga0070700_100600720 3300005441 Bacteria 862
18 Ga0070694_100013192 3300005444 Bacteria 5158
19 Ga0070708_100133659 3300005445 Bacteria 2297
20 Ga0070663_100015558 3300005455 Bacteria 4916
21 Ga0070681_10936425 3300005458 Bacteria 785
22 Ga0070706_101571481 3300005467 Bacteria 600
23 Ga0070707_100136757 3300005468 Bacteria 2384
24 Ga0070698_100112625 3300005471 Bacteria 2685
25 Ga0070698_100888271 3300005471 Bacteria 837
26 Ga0070698_101439553 3300005471 Bacteria 640
27 Ga0070699_100028466 3300005518 Bacteria 4819
28 Ga0070699_100102164 3300005518 Bacteria 2514
29 Ga0070699_102029646 3300005518 Bacteria 526
30 Ga0070672_101607377 3300005543 Bacteria 583
31 Ga0070686_100401945 3300005544 Bacteria 1042
32 Ga0070695_100448673 3300005545 Bacteria 988
33 Ga0070696_100025516 3300005546 Bacteria 4019
34 Ga0070704_100051265 3300005549 Bacteria 2905
35 Ga0070664_100003087 3300005564 Bacteria 13462
36 Ga0068857_100204499 3300005577 Bacteria 1801
37 Ga0068857_101799054 3300005577 Bacteria 599
38 Ga0070702_100591949 3300005615 Bacteria 830
39 Ga0068864_100951922 3300005618 Bacteria 850
40 Ga0068861_100005282 3300005719 Bacteria 8714
41 Ga0068861_100329222 3300005719 Bacteria 1333
42 Ga0068861_101090431 3300005719 Bacteria 767
43 Ga0068870_10001639 3300005840 Bacteria 9135
44 Ga0068863_100404974 3300005841 Bacteria 1335
45 Ga0068858_100000021 3300005842 Bacteria 172933
46 Ga0068860_100206099 3300005843 Bacteria 1907
47 Ga0068862_100149972 3300005844 Bacteria 2075
48 Ga0068862_100514552 3300005844 Bacteria 1138
49 Ga0081455_10001334 3300005937 Bacteria 30523
50 Ga0081455_10001458 3300005937 Bacteria 29272
51 Ga0081455_10092836 3300005937 Bacteria 2441
52 Ga0081455_10220434 3300005937 Bacteria 1406
53 Ga0081539_10033727 3300005985 Bacteria 3111
54 Ga0075432_10000770 3300006058 Bacteria 9973
55 Ga0070712_100831044 3300006175 Bacteria 794
56 Ga0075428_100001504 3300006844 Bacteria 24952
57 Ga0075428_100078689 3300006844 Bacteria 3599
58 Ga0075428_100552886 3300006844 Bacteria 1230
59 Ga0075428_100959626 3300006844 Bacteria 906
60 Ga0075430_100049388 3300006846 Bacteria 3551
61 Ga0075430_100080831 3300006846 Bacteria 2722
62 Ga0075431_100005403 3300006847 Bacteria 12618
63 Ga0075431_100044711 3300006847 Bacteria 4566
64 Ga0075431_100079861 3300006847 Bacteria 3377
65 Ga0075431_100507290 3300006847 Bacteria 1197
66 Ga0075431_101657697 3300006847 Bacteria 597
67 Ga0075433_10131289 3300006852 Bacteria 2225
68 Ga0075433_10539685 3300006852 Bacteria 1025
69 Ga0075433_10761649 3300006852 Bacteria 847
70 Ga0075434_100000651 3300006871 Bacteria 26885
71 Ga0075429_100016008 3300006880 Bacteria 6496
72 Ga0075429_100095506 3300006880 Bacteria 2592
73 Ga0075429_100235299 3300006880 Bacteria 1604
74 Ga0075429_100694115 3300006880 Bacteria 892
75 Ga0075429_101836616 3300006880 Bacteria 525
76 Ga0105251_10304661 3300009011 Bacteria 723
77 Ga0111539_10010508 3300009094 Bacteria 11651
78 Ga0111539_10244791 3300009094 Bacteria 2088
79 Ga0111539_11947320 3300009094 Bacteria 681
80 Ga0105245_10201305 3300009098 Bacteria 1912
81 Ga0105245_11264267 3300009098 Bacteria 787
82 Ga0105245_13055082 3300009098 Bacteria 519
83 Ga0114129_10015442 3300009147 Bacteria 10863
84 Ga0114129_10162220 3300009147 Bacteria 3052
85 Ga0114129_10537616 3300009147 Bacteria 1522
86 Ga0114129_10583557 3300009147 Bacteria 1450
87 Ga0105243_10033033 3300009148 Bacteria 3999
88 Ga0105243_10128690 3300009148 Bacteria 2145
89 Ga0105242_12177374 3300009176 Bacteria 599
90 Ga0105248_10001340 3300009177 Bacteria 27437
91 Ga0105248_10656778 3300009177 Bacteria 1183
92 Ga0105249_10016544 3300009553 Bacteria 6544
93 Ga0105249_10019005 3300009553 Bacteria 6128
94 Ga0105249_10594636 3300009553 Bacteria 1160
95 Ga0105239_11799640 3300010375 Bacteria 710
96 Ga0105246_10110775 3300011119 Bacteria 2016
97 Ga0157375_10362303 3300013308 Bacteria 1616
98 Ga0157375_10834580 3300013308 Bacteria 1069
99 Ga0157375_11438426 3300013308 Bacteria 813
100 Ga0157375_11485866 3300013308 Bacteria 799
101 Ga0163163_10003628 3300014325 Bacteria 13124
102 Ga0163163_10015997 3300014325 Bacteria 6953
103 Ga0157380_10464158 3300014326 Bacteria 1220
104 Ga0157380_12218854 3300014326 Bacteria 613
105 Ga0157379_10000005 3300014968 Bacteria 172948
106 Ga0207653_10008078 3300025885 Bacteria 3280
107 Ga0207643_10000505 3300025908 Bacteria 24931
108 Ga0207649_10097388 3300025920 Bacteria 1940
109 Ga0207646_10369037 3300025922 Bacteria 1297
110 Ga0207650_10011116 3300025925 Bacteria 6190
111 Ga0207687_11201778 3300025927 Bacteria 652
112 Ga0207709_10045898 3300025935 Bacteria 2649
113 Ga0207709_10592000 3300025935 Bacteria 877
114 Ga0207711_10000976 3300025941 Bacteria 27399
115 Ga0207661_10373417 3300025944 Bacteria 1290
116 Ga0207679_10152689 3300025945 Bacteria 1882
117 Ga0207712_10057309 3300025961 Bacteria 2748
118 Ga0207712_10195234 3300025961 Bacteria 1601
119 Ga0207668_10305178 3300025972 Bacteria 1315
120 Ga0207677_11243750 3300026023 Bacteria 682
121 Ga0207703_10000001 3300026035 Bacteria 822925
122 Ga0207678_10049694 3300026067 Bacteria 3624
123 Ga0207708_10013799 3300026075 Bacteria 6040
124 Ga0207708_10518283 3300026075 Bacteria 1001
125 Ga0207641_11315124 3300026088 Bacteria 723
126 Ga0207676_10025779 3300026095 Bacteria 4365
127 Ga0207676_11950832 3300026095 Bacteria 586
128 Ga0207674_10001264 3300026116 Bacteria 33028
129 Ga0207674_10674782 3300026116 Bacteria 998
130 Ga0207675_100015182 3300026118 Bacteria 7183
131 Ga0207675_100294547 3300026118 Bacteria 1579
132 Ga0207675_101288570 3300026118 Bacteria 751
133 Ga0207428_10005796 3300027907 Bacteria 11455
134 Ga0207428_10135790 3300027907 Bacteria 1880
135 Ga0268265_10273428 3300028380 Bacteria 1508
136 Ga0316579_10342962 3300031691 Bacteria 722
137 Ga0316578_10021318 3300031728 Bacteria 3595
138 Ga0307405_11296170 3300031731 Bacteria 633
139 Ga0373948_0196067 3300034817 Bacteria 525
140 Ga0373929_0178580 3300035085 Bacteria 584
141 Ga0373939_0009263 3300035114 Bacteria 2439
142 Ga0373941_0031103 3300035115 Bacteria 1588
143 Ga0373960_0066982 3300035121 Bacteria 1102
144 Ga0316574_0125535 3300035398 Bacteria 1649
145 Ga0373931_0671617 3300035691 Bacteria 682
146 Ga0316584_0034107 3300036712 Bacteria 3772
147 Ga0395899_0043866 3300037312 Bacteria 3333
148 Ga0395899_0075350 3300037312 Bacteria 2464
149 Ga0395899_0100927 3300037312 Bacteria 2083
150 Ga0395899_0110182 3300037312 Bacteria 1980
151 Ga0395900_0001091 3300037418 Bacteria 34515
152 Ga0395900_0017750 3300037418 Bacteria 7262
153 Ga0395900_0026835 3300037418 Bacteria 5894
154 Ga0395900_0058208 3300037418 Bacteria 3978
155 Ga0395900_0184321 3300037418 Bacteria 2119
156 Ga0395900_0410016 3300037418 Bacteria 1317
157 Ga0395898_0001434 3300037466 Bacteria 33796
158 Ga0395898_0040763 3300037466 Bacteria 4590
159 Ga0395898_0113004 3300037466 Bacteria 2603
160 Ga0395898_0249571 3300037466 Bacteria 1693
161 Ga0395898_1227037 3300037466 Bacteria 681
162 Ga0395905_0013983 3300037471 Bacteria 7678
163 Ga0395905_0032629 3300037471 Bacteria 4897
164 Ga0395905_0043193 3300037471 Bacteria 4229
165 Ga0395905_0083119 3300037471 Bacteria 3000
166 Ga0395905_0172577 3300037471 Bacteria 2031
167 Ga0395901_0008754 3300038443 Bacteria 10237
168 Ga0395901_0023581 3300038443 Bacteria 6309
169 Ga0395901_0054198 3300038443 Bacteria 4167
170 Ga0395901_0102395 3300038443 Bacteria 3005
171 Ga0395901_0111904 3300038443 Bacteria 2867
172 Ga0395901_0817807 3300038443 Bacteria 919
173 Ga0436360_1169293 3300039438 Bacteria 5021
174 Ga0439453_0143295 3300041408 Bacteria 563
175 Ga0451800_0955639 3300041459 Bacteria 1654
176 Ga0451847_0499484 3300041503 Bacteria 1311
177 Ga0451853_1057058 3300041512 Bacteria 9964
178 Ga0439443_020805 3300042003 Bacteria 1033
179 Ga0439455_0061517 3300042012 Bacteria 997
180 Ga0439456_173843 3300042013 Unclassified 507
181 Ga0439435_0258257 3300042436 Bacteria 588
182 Ga0439464_0160784 3300042439 Bacteria 706
183 Ga0439460_0151039 3300042461 Archaea 775
184 Ga0439440_0074433 3300042993 Bacteria 889
185 Ga0495617_223998 3300046452 Bacteria 584
186 Ga0495592_0227325 3300046454 Bacteria 1244
187 Ga0495651_0300733 3300046462 Bacteria 1076
188 Ga0495582_0539602 3300046473 Bacteria 674
189 Ga0495639_0572867 3300046475 Bacteria 579
190 Ga0495584_0185249 3300046491 Bacteria 1058
191 Ga0495584_0521084 3300046491 Bacteria 606
192 Ga0495584_0740307 3300046491 Bacteria 501
193 Ga0495585_0206068 3300046492 Bacteria 999
194 Ga0495608_0543638 3300046511 Bacteria 700
195 Ga0495628_0129199 3300046516 Bacteria 1934
196 Ga0495644_0090847 3300046523 Bacteria 1152
197 Ga0495642_0385808 3300046528 Bacteria 617
198 Ga0495652_0055404 3300046529 Bacteria 3372
199 Ga0495640_0191437 3300046533 Bacteria 1300
200 Ga0495609_0407779 3300046538 Bacteria 543
201 Ga0495667_0175506 3300046559 Bacteria 1376
202 Ga0495656_0122091 3300046615 Bacteria 1231
203 Ga0495656_0511118 3300046615 Bacteria 638
204 Ga0495611_0147741 3300046648 Bacteria 1097
205 Ga0495659_0030192 3300046664 Bacteria 1885
206 Ga0495659_0345892 3300046664 Bacteria 635
207 Ga0495661_0183613 3300046665 Bacteria 1107
208 Ga0495661_0561913 3300046665 Bacteria 539
209 Ga0495658_0037235 3300046683 Bacteria 2688
210 Ga0495613_0005257 3300046689 Bacteria 9726
211 Ga0495670_0714923 3300046691 Bacteria 546
212 Ga0495671_0195797 3300046692 Bacteria 981
213 Ga0495589_0192306 3300046794 Bacteria 965
214 Ga0495589_0232761 3300046794 Bacteria 864
215 Ga0495636_0346251 3300047318 Bacteria 701
216 Ga0495636_0615253 3300047318 Bacteria 532
217 Ga0495676_0013826 3300047321 Bacteria 7237
218 Ga0495684_0132166 3300047471 Bacteria 1874
219 Ga0496102_0787717 3300048905 Bacteria 873
220 Ga0496104_0214581 3300048907 Bacteria 1836
221 Ga0496104_0488840 3300048907 Bacteria 1142
222 Ga0496105_0136911 3300048908 Bacteria 2017
223 Ga0496105_0473678 3300048908 Bacteria 986
224 Ga0496108_0102692 3300048911 Bacteria 2440
225 Ga0496108_0380991 3300048911 Bacteria 1232
226 Ga0496109_0023426 3300048912 Bacteria 5482
227 Ga0496110_0016048 3300048913 Bacteria 6245
228 Ga0496110_1069217 3300048913 Bacteria 715
229 Ga0496111_0082385 3300048914 Bacteria 2350
230 Ga0496111_0501909 3300048914 Bacteria 893
231 Ga0501036_0965553 3300049572 Bacteria 698
232 Ga0501040_0108267 3300049576 Bacteria 1943
233 Ga0501040_0247643 3300049576 Bacteria 1271
234 Ga0501042_0015803 3300049578 Bacteria 5173
235 Ga0501042_0371638 3300049578 Bacteria 1035
236 Ga0501042_0723904 3300049578 Bacteria 724
237 Ga0501048_0452008 3300049582 Bacteria 920
238 Ga0501068_0268496 3300049584 Unclassified 1089
239 Ga0501069_0274872 3300049585 Bacteria 985
240 Ga0501071_0370456 3300049587 Bacteria 1091
241 Ga0501074_0628631 3300049590 Bacteria 759
242 Ga0501075_0206911 3300049591 Bacteria 1497
243 Ga0501076_0756160 3300049592 Bacteria 802
244 Ga0501077_0629713 3300049593 Bacteria 689
245 Ga0501243_121705 3300049675 Unclassified 541
246 Ga0501079_0147905 3300049741 Bacteria 1831
247 Ga0501079_0454413 3300049741 Bacteria 1006
248 Ga0501079_0747444 3300049741 Bacteria 770
249 Ga0501081_0054392 3300049743 Bacteria 2766
250 Ga0501081_0202356 3300049743 Bacteria 1440
251 Ga0501081_0663039 3300049743 Unclassified 782
252 Ga0501045_0424798 3300049824 Bacteria 989
253 nmdc:mga05p37_108928_c1 3300050507 Bacteria 3407
254 nmdc:mga05p37_16316_c1 3300050507 Bacteria 6058
255 nmdc:mga05p37_257352_c1 3300050507 Bacteria 2091
256 nmdc:mga05p37_308536_c1 3300050507 Bacteria 1877
257 nmdc:mga05p37_65609_c1 3300050507 Bacteria 4466
258 nmdc:mga09592_147161_c1 3300050508 Bacteria 2031
259 nmdc:mga09592_15267_c1 3300050508 Bacteria 6274
260 nmdc:mga09592_86379_c1 3300050508 Bacteria 2677
261 nmdc:mga0qj67_23224_c1 3300050509 Bacteria 4769
262 nmdc:mga0qj67_299670_c1 3300050509 Bacteria 1302
263 nmdc:mga0qj67_4869_c1 3300050509 Bacteria 9764
264 nmdc:mga06r32_1419589_c1 3300050510 Bacteria 636
265 nmdc:mga06r32_367228_c1 3300050510 Bacteria 1423
266 nmdc:mga06r32_54666_c1 3300050510 Bacteria 3829
267 nmdc:mga06r32_6208_c1 3300050510 Bacteria 10723
268 nmdc:mga08y16_1699790_c1 3300050511 Bacteria 586
269 nmdc:mga08y16_208027_c1 3300050511 Bacteria 2027
270 nmdc:mga08y16_483131_c1 3300050511 Bacteria 1260
271 nmdc:mga08y16_59569_c1 3300050511 Bacteria 3988
272 nmdc:mga0n895_1715826_c1 3300050512 Bacteria 590
273 nmdc:mga0n895_231662_c1 3300050512 Bacteria 1875
274 Ga0495601_0123719 3300053077 Bacteria 1681
275 Ga0495619_0056455 3300053085 Bacteria 2603
276 Ga0500568_0000069 3300053139 Bacteria 99921
277 Ga0501084_0351295 3300054114 Bacteria 1246
278 Ga0501082_0242711 3300060353 Bacteria 1568
279 Ga0530510_0116474 3300061734 Bacteria 1959
280 Ga0530510_0279760 3300061734 Bacteria 1246
281 2870785391 2870782633 Bacteria 9624083
282 nmdc:mga06r32_188479_c1
283 JGI24752J21851_1004582
284 JGI24747J21853_1022703
285 JGI24751J29686_10001376
286 JGI24751J29686_10011260
287 JGI25405J52794_10077394
288 Ga0070683_100009542
289 Ga0068869_101354338
290 Ga0068868_101163442
291 Ga0070661_100005560
292 Ga0070692_10371093
293 Ga0070668_100180129
294 Ga0070675_100118942
295 Ga0070703_10007995
296 Ga0070700_100170740
297 Ga0070700_100324733
298 Ga0070700_100600720
299 Ga0070694_100013192
300 Ga0070708_100133659
301 Ga0070663_100015558
302 Ga0070681_10936425
303 Ga0070706_101571481
304 Ga0070707_100136757
305 Ga0070698_100112625
306 Ga0070698_100888271
307 Ga0070698_101439553
308 Ga0070699_100028466
309 Ga0070699_100102164
310 Ga0070699_102029646
311 Ga0070672_101607377
312 Ga0070686_100401945
313 Ga0070695_100448673
314 Ga0070696_100025516
315 Ga0070704_100051265
316 Ga0070664_100003087
317 Ga0068857_100204499
318 Ga0068857_101799054
319 Ga0070702_100591949
320 Ga0068864_100951922
321 Ga0068861_100005282
322 Ga0068861_100329222
323 Ga0068861_101090431
324 Ga0068870_10001639
325 Ga0068863_100404974
326 Ga0068858_100000021
327 Ga0068860_100206099
328 Ga0068862_100149972
329 Ga0068862_100514552
330 Ga0081455_10001334
331 Ga0081455_10001458
332 Ga0081455_10092836
333 Ga0081455_10220434
334 Ga0081539_10033727
335 Ga0075432_10000770
336 Ga0070712_100831044
337 Ga0075428_100001504
338 Ga0075428_100078689
339 Ga0075428_100552886
340 Ga0075428_100959626
341 Ga0075430_100049388
342 Ga0075430_100080831
343 Ga0075431_100005403
344 Ga0075431_100044711
345 Ga0075431_100079861
346 Ga0075431_100507290
347 Ga0075431_101657697
348 Ga0075433_10131289
349 Ga0075433_10539685
350 Ga0075433_10761649
351 Ga0075434_100000651
352 Ga0075429_100016008
353 Ga0075429_100095506
354 Ga0075429_100235299
355 Ga0075429_100694115
356 Ga0075429_101836616
357 Ga0105251_10304661
358 Ga0111539_10010508
359 Ga0111539_10244791
360 Ga0111539_11947320
361 Ga0105245_10201305
362 Ga0105245_11264267
363 Ga0105245_13055082
364 Ga0114129_10015442
365 Ga0114129_10162220
366 Ga0114129_10537616
367 Ga0114129_10583557
368 Ga0105243_10033033
369 Ga0105243_10128690
370 Ga0105242_12177374
371 Ga0105248_10001340
372 Ga0105248_10656778
373 Ga0105249_10016544
374 Ga0105249_10019005
375 Ga0105249_10594636
376 Ga0105239_11799640
377 Ga0105246_10110775
378 Ga0157375_10362303
379 Ga0157375_10834580
380 Ga0157375_11438426
381 Ga0157375_11485866
382 Ga0163163_10003628
383 Ga0163163_10015997
384 Ga0157380_10464158
385 Ga0157380_12218854
386 Ga0157379_10000005
387 Ga0207653_10008078
388 Ga0207643_10000505
389 Ga0207649_10097388
390 Ga0207646_10369037
391 Ga0207650_10011116
392 Ga0207687_11201778
393 Ga0207709_10045898
394 Ga0207709_10592000
395 Ga0207711_10000976
396 Ga0207661_10373417
397 Ga0207679_10152689
398 Ga0207712_10057309
399 Ga0207712_10195234
400 Ga0207668_10305178
401 Ga0207677_11243750
402 Ga0207703_10000001
403 Ga0207678_10049694
404 Ga0207708_10013799
405 Ga0207708_10518283
406 Ga0207641_11315124
407 Ga0207676_10025779
408 Ga0207676_11950832
409 Ga0207674_10001264
410 Ga0207674_10674782
411 Ga0207675_100015182
412 Ga0207675_100294547
413 Ga0207675_101288570
414 Ga0207428_10005796
415 Ga0207428_10135790
416 Ga0268265_10273428
417 Ga0316579_10342962
418 Ga0316578_10021318
419 Ga0307405_11296170
420 Ga0373948_0196067
421 Ga0373929_0178580
422 Ga0373939_0009263
423 Ga0373941_0031103
424 Ga0373960_0066982
425 Ga0316574_0125535
426 Ga0373931_0671617
427 Ga0316584_0034107
428 Ga0395899_0043866
429 Ga0395899_0075350
430 Ga0395899_0100927
431 Ga0395899_0110182
432 Ga0395900_0001091
433 Ga0395900_0017750
434 Ga0395900_0026835
435 Ga0395900_0058208
436 Ga0395900_0184321
437 Ga0395900_0410016
438 Ga0395898_0001434
439 Ga0395898_0040763
440 Ga0395898_0113004
441 Ga0395898_0249571
442 Ga0395898_1227037
443 Ga0395905_0013983
444 Ga0395905_0032629
445 Ga0395905_0043193
446 Ga0395905_0083119
447 Ga0395905_0172577
448 Ga0395901_0008754
449 Ga0395901_0023581
450 Ga0395901_0054198
451 Ga0395901_0102395
452 Ga0395901_0111904
453 Ga0395901_0817807
454 Ga0436360_1169293
455 Ga0439453_0143295
456 Ga0451800_0955639
457 Ga0451847_0499484
458 Ga0451853_1057058
459 Ga0439443_020805
460 Ga0439455_0061517
461 Ga0439456_173843
462 Ga0439435_0258257
463 Ga0439464_0160784
464 Ga0439460_0151039
465 Ga0439440_0074433
466 Ga0495617_223998
467 Ga0495592_0227325
468 Ga0495651_0300733
469 Ga0495582_0539602
470 Ga0495639_0572867
471 Ga0495584_0185249
472 Ga0495584_0521084
473 Ga0495584_0740307
474 Ga0495585_0206068
475 Ga0495608_0543638
476 Ga0495628_0129199
477 Ga0495644_0090847
478 Ga0495642_0385808
479 Ga0495652_0055404
480 Ga0495640_0191437
481 Ga0495609_0407779
482 Ga0495667_0175506
483 Ga0495656_0122091
484 Ga0495656_0511118
485 Ga0495611_0147741
486 Ga0495659_0030192
487 Ga0495659_0345892
488 Ga0495661_0183613
489 Ga0495661_0561913
490 Ga0495658_0037235
491 Ga0495613_0005257
492 Ga0495670_0714923
493 Ga0495671_0195797
494 Ga0495589_0192306
495 Ga0495589_0232761
496 Ga0495636_0346251
497 Ga0495636_0615253
498 Ga0495676_0013826
499 Ga0495684_0132166
500 Ga0496102_0787717
501 Ga0496104_0214581
502 Ga0496104_0488840
503 Ga0496105_0136911
504 Ga0496105_0473678
505 Ga0496108_0102692
506 Ga0496108_0380991
507 Ga0496109_0023426
508 Ga0496110_0016048
509 Ga0496110_1069217
510 Ga0496111_0082385
511 Ga0496111_0501909
512 Ga0501036_0965553
513 Ga0501040_0108267
514 Ga0501040_0247643
515 Ga0501042_0015803
516 Ga0501042_0371638
517 Ga0501042_0723904
518 Ga0501048_0452008
519 Ga0501068_0268496
520 Ga0501069_0274872
521 Ga0501071_0370456
522 Ga0501074_0628631
523 Ga0501075_0206911
524 Ga0501076_0756160
525 Ga0501077_0629713
526 Ga0501243_121705
527 Ga0501079_0147905
528 Ga0501079_0454413
529 Ga0501079_0747444
530 Ga0501081_0054392
531 Ga0501081_0202356
532 Ga0501081_0663039
533 Ga0501045_0424798
534 nmdc:mga05p37_108928_c1
535 nmdc:mga05p37_16316_c1
536 nmdc:mga05p37_257352_c1
537 nmdc:mga05p37_308536_c1
538 nmdc:mga05p37_65609_c1
539 nmdc:mga09592_147161_c1
540 nmdc:mga09592_15267_c1
541 nmdc:mga09592_86379_c1
542 nmdc:mga0qj67_23224_c1
543 nmdc:mga0qj67_299670_c1
544 nmdc:mga0qj67_4869_c1
545 nmdc:mga06r32_1419589_c1
546 nmdc:mga06r32_367228_c1
547 nmdc:mga06r32_54666_c1
548 nmdc:mga06r32_6208_c1
549 nmdc:mga08y16_1699790_c1
550 nmdc:mga08y16_208027_c1
551 nmdc:mga08y16_483131_c1
552 nmdc:mga08y16_59569_c1
553 nmdc:mga0n895_1715826_c1
554 nmdc:mga0n895_231662_c1
555 Ga0495601_0123719
556 Ga0495619_0056455
557 Ga0500568_0000069
558 Ga0501084_0351295
559 Ga0501082_0242711
560 Ga0530510_0116474
561 Ga0530510_0279760
562 2870785391

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01597

GCV_H

Glycine cleavage H-protein

27

148

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ift-assembly1.cif.gz_A crystal structure of glycine cleavage system protein h from mycobacterium tuberculosis, using x-rays from the compact light source. 0.9328 2 115
3hgb-assembly1.cif.gz_A crystal structure of glycine cleavage system protein h from mycobacterium tuberculosis 0.9293 2 115
3wdn-assembly1.cif.gz_A high-resolution x-ray crystal structure of bovine h-protein using a high-pressure cryocooling method 0.9251 7 121
1htp-assembly1.cif.gz_A refined structures at 2 angstroms and 2.2 angstroms of the two forms of the h-protein, a lipoamide-containing protein of the glycine decarboxylase complex 0.9144 1 120
1onl-assembly3.cif.gz_C crystal structure of thermus thermophilus hb8 h-protein of the glycine cleavage system 0.9073 2 119
ID Description Score Start End Superfamily
3wdnA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9248 7 121 2.40.50.100
af_Q20634_6_139_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9125 7 115 2.40.50.100
af_Q54JU3_2_142_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.8935 7 116 2.40.50.100
af_Q5AKX1_36_173_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.8929 2 118 2.40.50.100
3a8jE00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.8927 3 117 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A0S7WV95-F1-model_v4 Glycine cleavage system protein H 0.9934 2 75 GO:0005829
GO:0005960
GO:0019464
AF-A0A3D2X5J3-F1-model_v4 Glycine cleavage system protein GcvH 0.9809 1 82 GO:0005737
GO:0005960
GO:0019464
AF-A0A2N2S5R8-F1-model_v4 Glycine cleavage system protein H 0.9759 1 81 GO:0005829
GO:0005960
GO:0019464
AF-A0A3D4IED5-F1-model_v4 Glycine cleavage system protein GcvH 0.9746 1 82 GO:0005829
GO:0005960
GO:0019464
AF-A0A661FE39-F1-model_v4 Glycine cleavage system protein GcvH 0.9735 2 84 GO:0005829
GO:0005960
GO:0019464

Map